Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64603.t1 | XP_003617676.1 | 93.9 | 754 | 46 | 0 | 1 | 754 | 1 | 754 | 0.00E+00 | 1385.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64603.t1 | Q9FJ62 | 54.6 | 766 | 328 | 8 | 3 | 754 | 7 | 766 | 1.1e-234 | 814.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64603.t1 | G7K4B9 | 93.9 | 754 | 46 | 0 | 1 | 754 | 1 | 754 | 0.0e+00 | 1385.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81414 | MS.gene64603 | PPI |
| MS.gene64603 | MS.gene63842 | PPI |
| MS.gene060072 | MS.gene64603 | PPI |
| MS.gene62515 | MS.gene64603 | PPI |
| MS.gene64603 | MS.gene79189 | PPI |
| MS.gene64603 | MS.gene020669 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64603.t1 | MTR_5g094230 | 93.899 | 754 | 46 | 0 | 1 | 754 | 1 | 754 | 0.0 | 1379 |
| MS.gene64603.t1 | MTR_5g094230 | 93.636 | 660 | 41 | 1 | 1 | 660 | 1 | 659 | 0.0 | 1225 |
| MS.gene64603.t1 | MTR_3g055610 | 60.315 | 698 | 265 | 4 | 16 | 712 | 21 | 707 | 0.0 | 842 |
| MS.gene64603.t1 | MTR_2g450160 | 46.254 | 694 | 354 | 12 | 29 | 714 | 185 | 867 | 0.0 | 585 |
| MS.gene64603.t1 | MTR_4g131380 | 44.444 | 684 | 360 | 14 | 29 | 711 | 44 | 708 | 0.0 | 540 |
| MS.gene64603.t1 | MTR_4g109600 | 27.635 | 351 | 215 | 15 | 14 | 331 | 11 | 355 | 5.93e-20 | 93.2 |
| MS.gene64603.t1 | MTR_4g109600 | 24.000 | 325 | 214 | 8 | 358 | 657 | 48 | 364 | 4.08e-18 | 87.8 |
| MS.gene64603.t1 | MTR_4g109600 | 29.121 | 182 | 111 | 6 | 14 | 180 | 11 | 189 | 1.89e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64603.t1 | AT5G55480 | 54.569 | 766 | 328 | 8 | 3 | 754 | 7 | 766 | 0.0 | 850 |
| MS.gene64603.t1 | AT4G26690 | 56.528 | 743 | 317 | 4 | 15 | 754 | 20 | 759 | 0.0 | 845 |
| MS.gene64603.t1 | AT1G66970 | 55.785 | 726 | 314 | 4 | 13 | 734 | 26 | 748 | 0.0 | 828 |
| MS.gene64603.t1 | AT1G66970 | 54.144 | 748 | 314 | 5 | 13 | 734 | 26 | 770 | 0.0 | 815 |
| MS.gene64603.t1 | AT1G66980 | 53.154 | 745 | 328 | 7 | 13 | 754 | 27 | 753 | 0.0 | 789 |
| MS.gene64603.t1 | AT1G66980 | 54.006 | 724 | 322 | 6 | 13 | 733 | 27 | 742 | 0.0 | 788 |
| MS.gene64603.t1 | AT1G66980 | 51.926 | 753 | 322 | 7 | 13 | 733 | 27 | 771 | 0.0 | 775 |
| MS.gene64603.t1 | AT1G66980 | 52.348 | 724 | 317 | 7 | 13 | 733 | 27 | 725 | 0.0 | 749 |
| MS.gene64603.t1 | AT3G20520 | 49.868 | 756 | 337 | 13 | 1 | 742 | 1 | 728 | 0.0 | 708 |
| MS.gene64603.t1 | AT5G58050 | 47.133 | 715 | 370 | 6 | 29 | 742 | 33 | 740 | 0.0 | 664 |
| MS.gene64603.t1 | AT5G58170 | 46.621 | 725 | 378 | 7 | 29 | 751 | 33 | 750 | 0.0 | 663 |
| MS.gene64603.t1 | AT1G66970 | 57.838 | 555 | 229 | 3 | 184 | 734 | 1 | 554 | 0.0 | 650 |
| MS.gene64603.t1 | AT1G74210 | 25.485 | 361 | 229 | 10 | 358 | 693 | 47 | 392 | 4.41e-21 | 96.7 |
| MS.gene64603.t1 | AT5G08030 | 23.647 | 351 | 229 | 10 | 335 | 659 | 28 | 365 | 2.14e-19 | 91.3 |
| MS.gene64603.t1 | AT5G08030 | 26.239 | 343 | 213 | 14 | 17 | 331 | 24 | 354 | 4.15e-17 | 84.3 |
| MS.gene64603.t1 | AT5G08030 | 23.647 | 351 | 229 | 10 | 335 | 659 | 43 | 380 | 2.87e-19 | 91.3 |
| MS.gene64603.t1 | AT5G08030 | 26.239 | 343 | 213 | 14 | 17 | 331 | 39 | 369 | 6.10e-17 | 84.0 |
Find 161 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTAGGCTGTGCGTTTC+CGG | 0.112510 | 5.3:-76411383 | None:intergenic |
| AAATAAAACTATGAATTATT+TGG | 0.161651 | 5.3:+76406467 | MS.gene64603:CDS |
| ACTATGAATTATTTGGTTAA+TGG | 0.169991 | 5.3:+76406474 | MS.gene64603:CDS |
| GTCCCATCGTTCTTAGCTTT+TGG | 0.221469 | 5.3:-76409272 | None:intergenic |
| TAGTGACTCTGCTTATATTT+TGG | 0.242787 | 5.3:+76406320 | MS.gene64603:CDS |
| GGGGACTTGGTTCCGGCAGC+AGG | 0.249174 | 5.3:-76411358 | None:intergenic |
| ATTGCTTCGGATGGAGTTAA+AGG | 0.260576 | 5.3:-76407418 | None:intergenic |
| GGAGATCAACTCGTTTATTC+AGG | 0.277238 | 5.3:+76410609 | MS.gene64603:CDS |
| TTTATCAAGACGTTTGCTTC+TGG | 0.293432 | 5.3:+76407169 | MS.gene64603:CDS |
| TCAAACTCTACTGACATTTC+CGG | 0.294696 | 5.3:+76406435 | MS.gene64603:CDS |
| AAACAACGAAACTTGTCTTT+AGG | 0.308071 | 5.3:+76407077 | MS.gene64603:CDS |
| GTTACAAAGCCTGCATTCTT+AGG | 0.310121 | 5.3:-76410472 | None:intergenic |
| TCTACAACCACATACCTCTT+TGG | 0.317456 | 5.3:+76407240 | MS.gene64603:CDS |
| CTGGTAGACAAGCTCGTATT+TGG | 0.319764 | 5.3:-76410356 | None:intergenic |
| TGCGTTTCCGGGTGGGGACT+TGG | 0.323178 | 5.3:-76411371 | None:intergenic |
| TTGACGTGGAACGATATAAA+AGG | 0.338935 | 5.3:+76408840 | MS.gene64603:CDS |
| TCCGGGTGGGGACTTGGTTC+CGG | 0.339707 | 5.3:-76411365 | None:intergenic |
| TCTCAAAATACACATTGTTC+AGG | 0.340050 | 5.3:+76409246 | MS.gene64603:CDS |
| TGTCTTTAGGTTTCTCAATC+AGG | 0.343222 | 5.3:+76407090 | MS.gene64603:CDS |
| ACCTTAGGCTGTGCGTTTCC+GGG | 0.346580 | 5.3:-76411382 | None:intergenic |
| TTTCCCTGCAGCCTCAATAT+TGG | 0.348515 | 5.3:+76409217 | MS.gene64603:intron |
| CCGTCCTTTGACAATTGAAC+AGG | 0.364554 | 5.3:-76408693 | None:intergenic |
| ACCTTGATTATCTCAAAGTA+TGG | 0.371442 | 5.3:+76408591 | MS.gene64603:CDS |
| AGGTTTGTGGTTGAACATTC+AGG | 0.373506 | 5.3:+76406834 | MS.gene64603:CDS |
| GTGTGTTATTACCCAAGTTT+AGG | 0.374182 | 5.3:-76411180 | None:intergenic |
| AAAAGACTTCCTGGTTGAAC+AGG | 0.375785 | 5.3:-76411217 | None:intergenic |
| CCATCAACCAATCAGACTTA+TGG | 0.375817 | 5.3:+76407124 | MS.gene64603:CDS |
| GCACACCCAATGCCGCTCTA+TGG | 0.381165 | 5.3:+76406355 | MS.gene64603:CDS |
| GAGTTTGAAAGGTTGAGATC+TGG | 0.385464 | 5.3:-76406420 | None:intergenic |
| CAATGAACCATAAGTCTGAT+TGG | 0.392275 | 5.3:-76407131 | None:intergenic |
| TTAACTCCATCCGAAGCAAT+AGG | 0.402132 | 5.3:+76407421 | MS.gene64603:CDS |
| GTCTCAGACGCGCATAAAGC+GGG | 0.404052 | 5.3:+76407262 | MS.gene64603:CDS |
| GGAGGGAGTGGAGCCATAGC+TGG | 0.404849 | 5.3:-76411268 | None:intergenic |
| CAGCAATGAGTTTGTATCTC+AGG | 0.417176 | 5.3:+76410558 | MS.gene64603:CDS |
| AACCACAAACCTGGTGTTTG+TGG | 0.421581 | 5.3:-76406823 | None:intergenic |
| CCACGGCCAGATTTGATCTC+AGG | 0.423046 | 5.3:-76408801 | None:intergenic |
| ACTCGCCGTTATCAATGAAT+TGG | 0.424311 | 5.3:-76407366 | None:intergenic |
| AGCTACAAACACAGCAAGAC+TGG | 0.428801 | 5.3:-76411425 | None:intergenic |
| CACCGACACTCTCGTCAATC+TGG | 0.430471 | 5.3:-76410375 | None:intergenic |
| CAGTAGTACAGAGCTATTAG+TGG | 0.434008 | 5.3:-76410317 | None:intergenic |
| TTCTGGAATTCTTGTTCCCA+AGG | 0.435786 | 5.3:+76407186 | MS.gene64603:CDS |
| ACCACAAACCTGGTGTTTGT+GGG | 0.438220 | 5.3:-76406822 | None:intergenic |
| TAAAATTATTGCCATCAAGA+AGG | 0.438448 | 5.3:-76406762 | None:intergenic |
| AGGCTGTGCGTTTCCGGGTG+GGG | 0.442083 | 5.3:-76411377 | None:intergenic |
| CCCCACAAACACCAGGTTTG+TGG | 0.442553 | 5.3:+76406821 | MS.gene64603:CDS |
| TTCCACAATGTTTGTTTGGG+TGG | 0.446707 | 5.3:-76410494 | None:intergenic |
| CGATGACGTACTCAAATTAG+TGG | 0.447475 | 5.3:+76406798 | MS.gene64603:CDS |
| AGGAAACAAATGCCTAAACT+TGG | 0.454432 | 5.3:+76411168 | MS.gene64603:intron |
| TACAGGCCATATGTATCCCT+TGG | 0.455587 | 5.3:-76407203 | None:intergenic |
| CCGGCAGCAGGGCTAACAGC+TGG | 0.455897 | 5.3:-76411346 | None:intergenic |
| ATCACACCATAGAGCGGCAT+TGG | 0.456467 | 5.3:-76406361 | None:intergenic |
| TAAGCAGAGTCACTAGAATC+AGG | 0.457095 | 5.3:-76406312 | None:intergenic |
| ATTAATGCTTTAAGTAAAGC+AGG | 0.459192 | 5.3:+76410256 | MS.gene64603:CDS |
| AAAATTATTGCCATCAAGAA+GGG | 0.463118 | 5.3:-76406761 | None:intergenic |
| AACGGCGAGTTCACCGTTGA+TGG | 0.464152 | 5.3:+76407379 | MS.gene64603:CDS |
| ACCCGGAAACGCACAGCCTA+AGG | 0.467508 | 5.3:+76411381 | MS.gene64603:CDS |
| CTCTGTACTACTGAAGTTCA+AGG | 0.467715 | 5.3:+76410327 | MS.gene64603:CDS |
| GGTTGAACAGGTTGCATGTA+GGG | 0.469907 | 5.3:-76411205 | None:intergenic |
| AACATCCACACCATCTTGTA+TGG | 0.470788 | 5.3:-76408661 | None:intergenic |
| TAGGCTGTGCGTTTCCGGGT+GGG | 0.471034 | 5.3:-76411378 | None:intergenic |
| AGTGTCCCTGAGATCAAATC+TGG | 0.477767 | 5.3:+76408795 | MS.gene64603:CDS |
| AGCCTATCTTGCAGAAAAGC+AGG | 0.479317 | 5.3:+76410210 | MS.gene64603:CDS |
| GGCCTTGTTATATGCTAAGT+TGG | 0.479777 | 5.3:-76408640 | None:intergenic |
| TAGAGCGGCATTGGGTGTGC+TGG | 0.482512 | 5.3:-76406352 | None:intergenic |
| TTGTTCCCAAGGGATACATA+TGG | 0.482867 | 5.3:+76407197 | MS.gene64603:CDS |
| TCTTTAGTCAAGGGAGGGAG+TGG | 0.485453 | 5.3:-76411280 | None:intergenic |
| TCAGTATTTCCTAAGAATGC+AGG | 0.488361 | 5.3:+76410463 | MS.gene64603:CDS |
| AGTAGGTCACCCCTTCTTGA+TGG | 0.490247 | 5.3:+76406751 | MS.gene64603:CDS |
| AACTAACCTATTGCTTCGGA+TGG | 0.492784 | 5.3:-76407427 | None:intergenic |
| TATATTTCATCACCTGAGGC+TGG | 0.492792 | 5.3:+76407019 | MS.gene64603:CDS |
| TCCATACTTTGAGATAATCA+AGG | 0.493201 | 5.3:-76408592 | None:intergenic |
| AAATAACTAACCTATTGCTT+CGG | 0.495365 | 5.3:-76407431 | None:intergenic |
| AGACGCGCATAAAGCGGGGC+TGG | 0.495580 | 5.3:+76407267 | MS.gene64603:CDS |
| TACGTCATTGCCTCCAGCTA+TGG | 0.500167 | 5.3:+76411255 | MS.gene64603:CDS |
| CCATAAGTCTGATTGGTTGA+TGG | 0.501602 | 5.3:-76407124 | None:intergenic |
| TGAGAAAGGGGCCAATATTG+AGG | 0.506432 | 5.3:-76409228 | None:intergenic |
| CGCCGTTATCAATGAATTGG+AGG | 0.511228 | 5.3:-76407363 | None:intergenic |
| TTAGCAACCGGAGGCAAAGA+TGG | 0.511894 | 5.3:-76411316 | None:intergenic |
| TTTGTTATGGACAGTAACTC+AGG | 0.514192 | 5.3:+76406720 | MS.gene64603:intron |
| GTACAGAGCTATTAGTGGAT+TGG | 0.514412 | 5.3:-76410312 | None:intergenic |
| TACCACTTCATCTTTAGTCA+AGG | 0.517506 | 5.3:-76411290 | None:intergenic |
| GGTAGAGCCATCTTTGCCTC+CGG | 0.517563 | 5.3:+76411309 | MS.gene64603:CDS |
| TACCTCCAATTCATTGATAA+CGG | 0.520729 | 5.3:+76407361 | MS.gene64603:CDS |
| CCAGCTGTTAGCCCTGCTGC+CGG | 0.521576 | 5.3:+76411346 | MS.gene64603:CDS |
| TATATCCTCAGCAGCAGCAT+TGG | 0.525009 | 5.3:-76410404 | None:intergenic |
| TATGCTAAGTTGGTACAAGC+TGG | 0.526959 | 5.3:-76408630 | None:intergenic |
| AAGAAGCAAGCAGAAACCTT+AGG | 0.531271 | 5.3:-76411397 | None:intergenic |
| CTCAAACTAAGAGATCTGTA+TGG | 0.533713 | 5.3:+76405767 | MS.gene64603:CDS |
| AATTGACGAAAGATGCAGTT+GGG | 0.534847 | 5.3:+76406388 | MS.gene64603:CDS |
| ACAGGCCATATGTATCCCTT+GGG | 0.536205 | 5.3:-76407202 | None:intergenic |
| TCCCTTGACTAAAGATGAAG+TGG | 0.540141 | 5.3:+76411288 | MS.gene64603:CDS |
| AGATAAAGACTAGCATCTAC+AGG | 0.544336 | 5.3:-76407220 | None:intergenic |
| TCACACCATAGAGCGGCATT+GGG | 0.546062 | 5.3:-76406360 | None:intergenic |
| CTGTTCAATTGTCAAAGGAC+GGG | 0.548143 | 5.3:+76408694 | MS.gene64603:CDS |
| AAATGTCAGTAGAGTTTGAA+AGG | 0.549442 | 5.3:-76406431 | None:intergenic |
| ACCACTTCATCTTTAGTCAA+GGG | 0.551508 | 5.3:-76411289 | None:intergenic |
| GCAGATTGCTTTGCTCACAT+AGG | 0.553113 | 5.3:+76408399 | MS.gene64603:intron |
| ATCTCAAAGTATGGAGCAAG+TGG | 0.553378 | 5.3:+76408600 | MS.gene64603:CDS |
| CTTCTCAGAAAACCAGCCTC+AGG | 0.554552 | 5.3:-76407031 | None:intergenic |
| CCACAAACCTGGTGTTTGTG+GGG | 0.555126 | 5.3:-76406821 | None:intergenic |
| TGAATGTTCAACCACAAACC+TGG | 0.555219 | 5.3:-76406832 | None:intergenic |
| GGGACTTGGTTCCGGCAGCA+GGG | 0.563994 | 5.3:-76411357 | None:intergenic |
| GAGAGCCTATCCAGTGTCAC+TGG | 0.565093 | 5.3:+76406537 | MS.gene64603:CDS |
| GAGATCAACTCGTTTATTCA+GGG | 0.565693 | 5.3:+76410610 | MS.gene64603:CDS |
| CTGCCCTGTTCAATTGTCAA+AGG | 0.566143 | 5.3:+76408689 | MS.gene64603:CDS |
| AGCGAAACGAAGAGAGCGCG+TGG | 0.567455 | 5.3:-76405712 | None:intergenic |
| GCCGGAACCAAGTCCCCACC+CGG | 0.567617 | 5.3:+76411364 | MS.gene64603:CDS |
| TGGTTGAACAGGTTGCATGT+AGG | 0.568699 | 5.3:-76411206 | None:intergenic |
| ATCCAAAAGCTAAGAACGAT+GGG | 0.569878 | 5.3:+76409270 | MS.gene64603:CDS |
| ACTTACCAGTGACACTGGAT+AGG | 0.573824 | 5.3:-76406542 | None:intergenic |
| GTTAAACTTACCAGTGACAC+TGG | 0.574347 | 5.3:-76406547 | None:intergenic |
| CCTGAGATCAAATCTGGCCG+TGG | 0.575011 | 5.3:+76408801 | MS.gene64603:CDS |
| TCTGGAATTCTTGTTCCCAA+GGG | 0.575619 | 5.3:+76407187 | MS.gene64603:CDS |
| GGGAGTGGAGCCATAGCTGG+AGG | 0.575933 | 5.3:-76411265 | None:intergenic |
| CCTGTTCAATTGTCAAAGGA+CGG | 0.576981 | 5.3:+76408693 | MS.gene64603:CDS |
| GGCAACAATGCTACAAGAAG+AGG | 0.577262 | 5.3:+76408420 | MS.gene64603:CDS |
| AGGCGTCTTGATCATTGTTG+AGG | 0.579463 | 5.3:+76409349 | MS.gene64603:CDS |
| CACGGCCAGATTTGATCTCA+GGG | 0.585180 | 5.3:-76408800 | None:intergenic |
| CCACCACTGGTCATCTCACA+TGG | 0.586798 | 5.3:+76406270 | MS.gene64603:CDS |
| GTTAATGGTGTACCCACAAG+TGG | 0.588215 | 5.3:+76406489 | MS.gene64603:CDS |
| TTAGGCTGTGCGTTTCCGGG+TGG | 0.588372 | 5.3:-76411379 | None:intergenic |
| TATAACAAGGCCATACAAGA+TGG | 0.590025 | 5.3:+76408651 | MS.gene64603:CDS |
| TCTGTATGGAACACACTCAC+AGG | 0.590984 | 5.3:+76405781 | MS.gene64603:CDS |
| TGCTACCAATGCTGCTGCTG+AGG | 0.595624 | 5.3:+76410399 | MS.gene64603:CDS |
| TACATGCAACCTGTTCAACC+AGG | 0.595870 | 5.3:+76411208 | MS.gene64603:CDS |
| TTGTTATGGACAGTAACTCA+GGG | 0.596068 | 5.3:+76406721 | MS.gene64603:intron |
| CAAGGCCATACAAGATGGTG+TGG | 0.598251 | 5.3:+76408656 | MS.gene64603:CDS |
| CTTCATCTTTAGTCAAGGGA+GGG | 0.599472 | 5.3:-76411285 | None:intergenic |
| ATCAGTCAGCACACCATCAA+CGG | 0.599870 | 5.3:-76407392 | None:intergenic |
| GGAAACAAATGCCTAAACTT+GGG | 0.602318 | 5.3:+76411169 | MS.gene64603:intron |
| GGTCTCAGACGCGCATAAAG+CGG | 0.603491 | 5.3:+76407261 | MS.gene64603:CDS |
| AAAGCAGGTTATGATAAACC+AGG | 0.604916 | 5.3:+76410271 | MS.gene64603:CDS |
| ATTGGGTGTGCTGGTTTGTG+CGG | 0.608455 | 5.3:-76406343 | None:intergenic |
| TTAGTGGCCCCACAAACACC+AGG | 0.609710 | 5.3:+76406814 | MS.gene64603:CDS |
| AATTGGAGGTATTCAGCAAG+AGG | 0.612012 | 5.3:-76407349 | None:intergenic |
| ACTTCATCTTTAGTCAAGGG+AGG | 0.615576 | 5.3:-76411286 | None:intergenic |
| CAGTTATATTTCATCACCTG+AGG | 0.615753 | 5.3:+76407015 | MS.gene64603:CDS |
| GCCTATCTTGCAGAAAAGCA+GGG | 0.620294 | 5.3:+76410211 | MS.gene64603:CDS |
| AATCCAAAAGCTAAGAACGA+TGG | 0.625091 | 5.3:+76409269 | MS.gene64603:CDS |
| CGTCCTTTGACAATTGAACA+GGG | 0.625425 | 5.3:-76408692 | None:intergenic |
| TAACTCAGGGAGTATACAGT+AGG | 0.632133 | 5.3:+76406734 | MS.gene64603:CDS |
| TCTGAGACCAAAGAGGTATG+TGG | 0.634462 | 5.3:-76407247 | None:intergenic |
| TTTCTTCTCAGATTCAACTG+TGG | 0.657126 | 5.3:+76410588 | MS.gene64603:CDS |
| CAATTGACGAAAGATGCAGT+TGG | 0.658027 | 5.3:+76406387 | MS.gene64603:CDS |
| AAATTATTGCCATCAAGAAG+GGG | 0.658327 | 5.3:-76406760 | None:intergenic |
| TTGAAAGGTTGAGATCTGGA+AGG | 0.659984 | 5.3:-76406416 | None:intergenic |
| TAAAGCATTAATGACAACAT+CGG | 0.664246 | 5.3:-76410245 | None:intergenic |
| TACCAGATTGACGAGAGTGT+CGG | 0.667983 | 5.3:+76410373 | MS.gene64603:CDS |
| AGTTGAATGAAAATATGCCA+CGG | 0.668031 | 5.3:-76408818 | None:intergenic |
| GAAGCTAGTTTGAGCAACTG+TGG | 0.669967 | 5.3:-76408757 | None:intergenic |
| AACCACCCAAACAAACATTG+TGG | 0.671201 | 5.3:+76410492 | MS.gene64603:CDS |
| AAGCAGGTTATGATAAACCA+GGG | 0.675378 | 5.3:+76410272 | MS.gene64603:CDS |
| TCTCAGACGCGCATAAAGCG+GGG | 0.675654 | 5.3:+76407263 | MS.gene64603:CDS |
| CCACTGGTCATCTCACATGG+TGG | 0.682552 | 5.3:+76406273 | MS.gene64603:CDS |
| ATGCGCGTCTGAGACCAAAG+AGG | 0.682558 | 5.3:-76407254 | None:intergenic |
| TTGCACATCACACCATAGAG+CGG | 0.694628 | 5.3:-76406367 | None:intergenic |
| CCATGTGAGATGACCAGTGG+TGG | 0.695620 | 5.3:-76406270 | None:intergenic |
| TGAACAGGTTGCATGTAGGG+AGG | 0.700757 | 5.3:-76411202 | None:intergenic |
| TACCAACTTAGCATATAACA+AGG | 0.705932 | 5.3:+76408638 | MS.gene64603:CDS |
| ATGTTTCTACGAAAACTGAG+AGG | 0.710248 | 5.3:-76410534 | None:intergenic |
| CCACCATGTGAGATGACCAG+TGG | 0.782734 | 5.3:-76406273 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAACTATGAATTATT+TGG | + | chr5.3:76406467-76406486 | MS.gene64603:CDS | 10.0% |
| !!! | AAATAATTCATAGTTTTATT+TGG | - | chr5.3:76406468-76406487 | None:intergenic | 10.0% |
| !!! | AATAATTCATAGTTTTATTT+GGG | - | chr5.3:76406467-76406486 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTGAAGA+AGG | - | chr5.3:76411031-76411050 | None:intergenic | 10.0% |
| !! | AAGTAAAACAAAGTTAATTA+AGG | - | chr5.3:76411065-76411084 | None:intergenic | 15.0% |
| !! | ATGATAATTTCTTATATGAA+AGG | - | chr5.3:76408112-76408131 | None:intergenic | 15.0% |
| !! | ATTATTAAATGATGAAGAAA+TGG | - | chr5.3:76410992-76411011 | None:intergenic | 15.0% |
| !! | ATTCAATGAATATATTGATA+TGG | - | chr5.3:76407749-76407768 | None:intergenic | 15.0% |
| !! | GAATTATATACAGAAATAAT+AGG | - | chr5.3:76409389-76409408 | None:intergenic | 15.0% |
| !! | TAAGAATTTATCAATTGAAT+TGG | + | chr5.3:76407782-76407801 | MS.gene64603:intron | 15.0% |
| !! | TACTCAAATAATTAAAATGT+TGG | - | chr5.3:76407587-76407606 | None:intergenic | 15.0% |
| !! | TATAAGATTATGTTAGTAAT+AGG | + | chr5.3:76409442-76409461 | MS.gene64603:intron | 15.0% |
| !! | TGATAATTTCTTATATGAAA+GGG | - | chr5.3:76408111-76408130 | None:intergenic | 15.0% |
| !!! | AAATTAGTTTCTTTATCTTA+AGG | + | chr5.3:76406150-76406169 | MS.gene64603:intron | 15.0% |
| !!! | ACATTTTAATTATTTGAGTA+AGG | + | chr5.3:76407587-76407606 | MS.gene64603:intron | 15.0% |
| !!! | TTGCTGTTATATATTTTAAA+TGG | + | chr5.3:76407687-76407706 | MS.gene64603:intron | 15.0% |
| !! | AAAAAGAAGAAAAATAGTGT+GGG | + | chr5.3:76410812-76410831 | MS.gene64603:intron | 20.0% |
| !! | AAAAGTAAAAAAGCAATGAT+TGG | - | chr5.3:76407655-76407674 | None:intergenic | 20.0% |
| !! | AACAAAGTTAATTAAGGAAA+TGG | - | chr5.3:76411059-76411078 | None:intergenic | 20.0% |
| !! | AAGCATACATATATATTCTA+AGG | - | chr5.3:76408322-76408341 | None:intergenic | 20.0% |
| !! | ACTATGAATTATTTGGTTAA+TGG | + | chr5.3:76406474-76406493 | MS.gene64603:CDS | 20.0% |
| !! | TAAATGATACATAATCAAGT+TGG | + | chr5.3:76407810-76407829 | MS.gene64603:intron | 20.0% |
| !! | TACAATCATTGTTCAATAAT+AGG | + | chr5.3:76407912-76407931 | MS.gene64603:intron | 20.0% |
| !! | TGAGTAGGATATAATAAAAA+TGG | + | chr5.3:76409948-76409967 | MS.gene64603:intron | 20.0% |
| !!! | AAAACAAATTGGTTTCTATT+TGG | + | chr5.3:76410068-76410087 | MS.gene64603:intron | 20.0% |
| !!! | AAACAAATTGGTTTCTATTT+GGG | + | chr5.3:76410069-76410088 | MS.gene64603:intron | 20.0% |
| !!! | ATTTGAAACAAAAAGTTTGT+AGG | - | chr5.3:76410130-76410149 | None:intergenic | 20.0% |
| !!! | GATATTTAGTTTTGTTGTTA+TGG | + | chr5.3:76406578-76406597 | MS.gene64603:intron | 20.0% |
| !!! | GCATTAAAAAATTGTGTTTT+AGG | + | chr5.3:76409020-76409039 | MS.gene64603:intron | 20.0% |
| !!! | GTGAGTTTTCAAATTTATTA+TGG | + | chr5.3:76406684-76406703 | MS.gene64603:intron | 20.0% |
| !!! | TCAATTGATTTTAAGCAAAA+TGG | - | chr5.3:76408723-76408742 | None:intergenic | 20.0% |
| !!! | TCTTTATCTTAAGGTTTTTA+AGG | + | chr5.3:76406159-76406178 | MS.gene64603:intron | 20.0% |
| !!! | TTTCTGAAATCTTTTTGTTA+TGG | + | chr5.3:76406707-76406726 | MS.gene64603:intron | 20.0% |
| !!! | TTTTTTTTTGAAGAAGGAAA+TGG | - | chr5.3:76411025-76411044 | None:intergenic | 20.0% |
| ! | AAAATTATTGCCATCAAGAA+GGG | - | chr5.3:76406764-76406783 | None:intergenic | 25.0% |
| ! | AAATAACTAACCTATTGCTT+CGG | - | chr5.3:76407434-76407453 | None:intergenic | 25.0% |
| ! | AATCAGATTCATTCTATTTG+CGG | - | chr5.3:76407488-76407507 | None:intergenic | 25.0% |
| ! | AATTATACTGTACCATTGAT+AGG | + | chr5.3:76410702-76410721 | MS.gene64603:intron | 25.0% |
| ! | AGTGCAAATTTAATGGTTTA+GGG | + | chr5.3:76409784-76409803 | MS.gene64603:intron | 25.0% |
| ! | ATAGGATAATCAAAGATTCA+TGG | + | chr5.3:76409069-76409088 | MS.gene64603:intron | 25.0% |
| ! | ATGATCCAGAAAATAAGAAT+AGG | + | chr5.3:76409878-76409897 | MS.gene64603:intron | 25.0% |
| ! | ATGCATCAAAAGAATCTATT+AGG | - | chr5.3:76406022-76406041 | None:intergenic | 25.0% |
| ! | ATTGATATGGAGAAATTTGT+AGG | - | chr5.3:76407736-76407755 | None:intergenic | 25.0% |
| ! | CTAGAAATTATTGATCAACA+AGG | - | chr5.3:76408480-76408499 | None:intergenic | 25.0% |
| ! | GAAAAAGAAGAAAAATAGTG+TGG | + | chr5.3:76410811-76410830 | MS.gene64603:intron | 25.0% |
| ! | TAAAATTATTGCCATCAAGA+AGG | - | chr5.3:76406765-76406784 | None:intergenic | 25.0% |
| ! | TAGGATAATCAAAGATTCAT+GGG | + | chr5.3:76409070-76409089 | MS.gene64603:intron | 25.0% |
| ! | TAGTGCAAATTTAATGGTTT+AGG | + | chr5.3:76409783-76409802 | MS.gene64603:intron | 25.0% |
| ! | TCAACCAAAGAAAAACAAAT+TGG | + | chr5.3:76410057-76410076 | MS.gene64603:intron | 25.0% |
| ! | TCAGATTAGTGCAAATTTAA+TGG | + | chr5.3:76409777-76409796 | MS.gene64603:intron | 25.0% |
| ! | TCTGAATAATATTTAACTGC+TGG | - | chr5.3:76408905-76408924 | None:intergenic | 25.0% |
| ! | TCTTTAGTCTCTATTTAAGA+AGG | + | chr5.3:76408353-76408372 | MS.gene64603:intron | 25.0% |
| ! | TTAACTTTACAATCTTGGTA+AGG | + | chr5.3:76407850-76407869 | MS.gene64603:intron | 25.0% |
| ! | TTATTCACTAAGAACATGAT+TGG | + | chr5.3:76407519-76407538 | MS.gene64603:intron | 25.0% |
| ! | TTGATATGGAGAAATTTGTA+GGG | - | chr5.3:76407735-76407754 | None:intergenic | 25.0% |
| ! | TTGATTATGTATCATTTAGC+AGG | - | chr5.3:76407808-76407827 | None:intergenic | 25.0% |
| ! | TTGTTAAACTTGATATGGTT+AGG | + | chr5.3:76410918-76410937 | MS.gene64603:intron | 25.0% |
| !! | ACAATGATTGTATAGTTTGT+AGG | - | chr5.3:76407904-76407923 | None:intergenic | 25.0% |
| !! | AGTTAGTTTAAGAACAAACA+AGG | - | chr5.3:76406897-76406916 | None:intergenic | 25.0% |
| !! | ATAGAACTTTCTTTGACTTA+CGG | - | chr5.3:76408872-76408891 | None:intergenic | 25.0% |
| !! | ATTAATGCTTTAAGTAAAGC+AGG | + | chr5.3:76410256-76410275 | MS.gene64603:CDS | 25.0% |
| !! | CTAGTTTAACTTTACAATCT+TGG | + | chr5.3:76407845-76407864 | MS.gene64603:intron | 25.0% |
| !! | TAAAGCATTAATGACAACAT+CGG | - | chr5.3:76410248-76410267 | None:intergenic | 25.0% |
| !!! | AACAATGTGTATTTTGAGAA+AGG | - | chr5.3:76409245-76409264 | None:intergenic | 25.0% |
| !!! | ACAATGTGTATTTTGAGAAA+GGG | - | chr5.3:76409244-76409263 | None:intergenic | 25.0% |
| !!! | CCAGTTTAACTTTATCTTTT+GGG | + | chr5.3:76406188-76406207 | MS.gene64603:intron | 25.0% |
| !!! | GAAACCAATTTGTTTTTCTT+TGG | - | chr5.3:76410064-76410083 | None:intergenic | 25.0% |
| !!! | TATCTCCTATTCTTATTTTC+TGG | - | chr5.3:76409886-76409905 | None:intergenic | 25.0% |
| !!! | TCCAGTTTAACTTTATCTTT+TGG | + | chr5.3:76406187-76406206 | MS.gene64603:intron | 25.0% |
| !!! | TGAGTTTGTTAAACTTGATA+TGG | + | chr5.3:76410913-76410932 | MS.gene64603:intron | 25.0% |
| !!! | TGGATTGGATATAAACTTTT+TGG | - | chr5.3:76410300-76410319 | None:intergenic | 25.0% |
| AAAAATCAGACTTCTCTATC+AGG | + | chr5.3:76409329-76409348 | MS.gene64603:CDS | 30.0% | |
| AAACAACGAAACTTGTCTTT+AGG | + | chr5.3:76407077-76407096 | MS.gene64603:CDS | 30.0% | |
| AAATGTCAGTAGAGTTTGAA+AGG | - | chr5.3:76406434-76406453 | None:intergenic | 30.0% | |
| AAATTATTGCCATCAAGAAG+GGG | - | chr5.3:76406763-76406782 | None:intergenic | 30.0% | |
| AATTAGACTTAGAAGAGTCT+GGG | - | chr5.3:76408952-76408971 | None:intergenic | 30.0% | |
| ACCATTGATAGGAGTTTAAT+TGG | + | chr5.3:76410713-76410732 | MS.gene64603:intron | 30.0% | |
| ACCTTGATTATCTCAAAGTA+TGG | + | chr5.3:76408591-76408610 | MS.gene64603:CDS | 30.0% | |
| AGCTTAGAACTTCACTTTAT+AGG | + | chr5.3:76409051-76409070 | MS.gene64603:intron | 30.0% | |
| AGTTGAATGAAAATATGCCA+CGG | - | chr5.3:76408821-76408840 | None:intergenic | 30.0% | |
| ATAATCAGTCATACCAACTA+TGG | - | chr5.3:76409819-76409838 | None:intergenic | 30.0% | |
| ATTCAGGGTGCAAAAATTAA+CGG | + | chr5.3:76410625-76410644 | MS.gene64603:CDS | 30.0% | |
| ATTGGATGGAAAAGTTTCAA+TGG | + | chr5.3:76407537-76407556 | MS.gene64603:intron | 30.0% | |
| CCATTGATAGGAGTTTAATT+GGG | + | chr5.3:76410714-76410733 | MS.gene64603:intron | 30.0% | |
| CCCAAAAGATAAAGTTAAAC+TGG | - | chr5.3:76406191-76406210 | None:intergenic | 30.0% | |
| CGAATTTCTTGGGATTATAT+TGG | + | chr5.3:76409715-76409734 | MS.gene64603:intron | 30.0% | |
| GCATTATAAATAAGTTGCAG+AGG | + | chr5.3:76409604-76409623 | MS.gene64603:intron | 30.0% | |
| GGGAAGAATCATAAATTTGT+AGG | + | chr5.3:76406208-76406227 | MS.gene64603:intron | 30.0% | |
| GTATGTTTAGAGGATGTAAA+AGG | - | chr5.3:76408241-76408260 | None:intergenic | 30.0% | |
| TAAGTTGCAGAGGAAAATAA+AGG | + | chr5.3:76409614-76409633 | MS.gene64603:intron | 30.0% | |
| TACCAACTTAGCATATAACA+AGG | + | chr5.3:76408638-76408657 | MS.gene64603:CDS | 30.0% | |
| TACCTCCAATTCATTGATAA+CGG | + | chr5.3:76407361-76407380 | MS.gene64603:CDS | 30.0% | |
| TATTGAACTGAACTGAATCA+TGG | + | chr5.3:76405925-76405944 | MS.gene64603:intron | 30.0% | |
| TCAAAAGAATCTATTAGGAC+AGG | - | chr5.3:76406017-76406036 | None:intergenic | 30.0% | |
| TCTCAAAATACACATTGTTC+AGG | + | chr5.3:76409246-76409265 | MS.gene64603:CDS | 30.0% | |
| TGACAGTATGGATAGTTAAT+AGG | - | chr5.3:76408196-76408215 | None:intergenic | 30.0% | |
| TGATATGGAGAAATTTGTAG+GGG | - | chr5.3:76407734-76407753 | None:intergenic | 30.0% | |
| TGATGAAGAAAATGACAGTA+TGG | - | chr5.3:76408208-76408227 | None:intergenic | 30.0% | |
| TTCGTGAAGAAATACTAGAA+CGG | - | chr5.3:76410018-76410037 | None:intergenic | 30.0% | |
| TTGGATGGAAAAGTTTCAAT+GGG | + | chr5.3:76407538-76407557 | MS.gene64603:intron | 30.0% | |
| ! | AGTATCTATGAGCAGTTTTA+GGG | - | chr5.3:76410666-76410685 | None:intergenic | 30.0% |
| ! | ATTGTTCTCTATTCTTTTGC+AGG | + | chr5.3:76411148-76411167 | MS.gene64603:intron | 30.0% |
| ! | CAAAAGCGAAATGTTTTCAA+TGG | - | chr5.3:76409103-76409122 | None:intergenic | 30.0% |
| ! | CATTGAAAACATTTCGCTTT+TGG | + | chr5.3:76409101-76409120 | MS.gene64603:intron | 30.0% |
| ! | CTTTTCCACAATGTTTGTTT+GGG | - | chr5.3:76410500-76410519 | None:intergenic | 30.0% |
| ! | GTTATGGATTCAGTATTTTG+TGG | + | chr5.3:76406594-76406613 | MS.gene64603:intron | 30.0% |
| ! | TAGAACTTTCTTTGACTTAC+GGG | - | chr5.3:76408871-76408890 | None:intergenic | 30.0% |
| ! | TAGTGACTCTGCTTATATTT+TGG | + | chr5.3:76406320-76406339 | MS.gene64603:CDS | 30.0% |
| ! | TATTTTCATTCAACTTGACG+TGG | + | chr5.3:76408826-76408845 | MS.gene64603:CDS | 30.0% |
| !! | AAAAACATTTGCTAGTTCTG+TGG | + | chr5.3:76410426-76410445 | MS.gene64603:CDS | 30.0% |
| !! | AAGACAAGTTTCGTTGTTTT+TGG | - | chr5.3:76407076-76407095 | None:intergenic | 30.0% |
| !! | CAATGTGTATTTTGAGAAAG+GGG | - | chr5.3:76409243-76409262 | None:intergenic | 30.0% |
| !! | CTTTTCTATGTTTAGCTTAC+TGG | + | chr5.3:76406662-76406681 | MS.gene64603:intron | 30.0% |
| !! | TCCATACTTTGAGATAATCA+AGG | - | chr5.3:76408595-76408614 | None:intergenic | 30.0% |
| !! | TCTATCTGATTCTGAGATTA+TGG | - | chr5.3:76408993-76409012 | None:intergenic | 30.0% |
| !! | TTTCACCTTGTTACTTTGAA+AGG | + | chr5.3:76409843-76409862 | MS.gene64603:intron | 30.0% |
| !!! | AGACAAGTTTCGTTGTTTTT+GGG | - | chr5.3:76407075-76407094 | None:intergenic | 30.0% |
| !!! | AGTTTTATTTGGGAAAACAC+CGG | - | chr5.3:76406457-76406476 | None:intergenic | 30.0% |
| !!! | GTTAAACAACTTTGTTTTGC+AGG | + | chr5.3:76406243-76406262 | MS.gene64603:intron | 30.0% |
| AAAGCAGGTTATGATAAACC+AGG | + | chr5.3:76410271-76410290 | MS.gene64603:CDS | 35.0% | |
| AAGCAGGTTATGATAAACCA+GGG | + | chr5.3:76410272-76410291 | MS.gene64603:CDS | 35.0% | |
| AATAGGCATGAAAAACCAAG+AGG | - | chr5.3:76408179-76408198 | None:intergenic | 35.0% | |
| AATCCAAAAGCTAAGAACGA+TGG | + | chr5.3:76409269-76409288 | MS.gene64603:CDS | 35.0% | |
| AATTGACGAAAGATGCAGTT+GGG | + | chr5.3:76406388-76406407 | MS.gene64603:CDS | 35.0% | |
| ACAGAAAAATAGCCACTTGT+GGG | - | chr5.3:76406504-76406523 | None:intergenic | 35.0% | |
| ACCACTTCATCTTTAGTCAA+GGG | - | chr5.3:76411292-76411311 | None:intergenic | 35.0% | |
| ACTTTACAATCTTGGTAAGG+AGG | + | chr5.3:76407853-76407872 | MS.gene64603:intron | 35.0% | |
| AGAGGACGGAAATCTTTATA+AGG | - | chr5.3:76408161-76408180 | None:intergenic | 35.0% | |
| AGATAAAGACTAGCATCTAC+AGG | - | chr5.3:76407223-76407242 | None:intergenic | 35.0% | |
| AGGAAACAAATGCCTAAACT+TGG | + | chr5.3:76411168-76411187 | MS.gene64603:intron | 35.0% | |
| AGGAGAGTAAATCATGAAAG+TGG | - | chr5.3:76406877-76406896 | None:intergenic | 35.0% | |
| AGTAGATTCTCCCAACAAAA+AGG | + | chr5.3:76410863-76410882 | MS.gene64603:intron | 35.0% | |
| ATACTAGAACGGAAATTCAC+AGG | - | chr5.3:76410007-76410026 | None:intergenic | 35.0% | |
| ATCCAAAAGCTAAGAACGAT+GGG | + | chr5.3:76409270-76409289 | MS.gene64603:CDS | 35.0% | |
| ATCCTCTAAACATACGACAA+AGG | + | chr5.3:76408246-76408265 | MS.gene64603:intron | 35.0% | |
| ATGACTGAAAAAAGACTTCC+TGG | - | chr5.3:76411229-76411248 | None:intergenic | 35.0% | |
| ATGGAAAAGTTTCAATGGGA+AGG | + | chr5.3:76407542-76407561 | MS.gene64603:intron | 35.0% | |
| ATTCTATAACTTCTGCCCTT+AGG | - | chr5.3:76409471-76409490 | None:intergenic | 35.0% | |
| ATTGGGATAAAGGATAGGTA+GGG | + | chr5.3:76409646-76409665 | MS.gene64603:intron | 35.0% | |
| ATTTCTTGTCCTAATGCTGA+TGG | + | chr5.3:76407965-76407984 | MS.gene64603:intron | 35.0% | |
| CAATGAACCATAAGTCTGAT+TGG | - | chr5.3:76407134-76407153 | None:intergenic | 35.0% | |
| CAATTAGACTTAGAAGAGTC+TGG | - | chr5.3:76408953-76408972 | None:intergenic | 35.0% | |
| CAGTTATATTTCATCACCTG+AGG | + | chr5.3:76407015-76407034 | MS.gene64603:CDS | 35.0% | |
| CATACCAACTATGGAGTAAA+TGG | - | chr5.3:76409810-76409829 | None:intergenic | 35.0% | |
| CCCAATTAAACTCCTATCAA+TGG | - | chr5.3:76410717-76410736 | None:intergenic | 35.0% | |
| CTCAAACTAAGAGATCTGTA+TGG | + | chr5.3:76405767-76405786 | MS.gene64603:CDS | 35.0% | |
| GAGATCAACTCGTTTATTCA+GGG | + | chr5.3:76410610-76410629 | MS.gene64603:CDS | 35.0% | |
| GGAAACAAATGCCTAAACTT+GGG | + | chr5.3:76411169-76411188 | MS.gene64603:intron | 35.0% | |
| GTTAGTAATAGGACTCCTAA+GGG | + | chr5.3:76409453-76409472 | MS.gene64603:intron | 35.0% | |
| GTTCAATAATAGGACACTGA+TGG | + | chr5.3:76407922-76407941 | MS.gene64603:intron | 35.0% | |
| TAATTGCTGTCTGCAGTAAT+TGG | + | chr5.3:76409544-76409563 | MS.gene64603:intron | 35.0% | |
| TACCACTTCATCTTTAGTCA+AGG | - | chr5.3:76411293-76411312 | None:intergenic | 35.0% | |
| TATAAAGATTTCCGTCCTCT+TGG | + | chr5.3:76408161-76408180 | MS.gene64603:intron | 35.0% | |
| TATAACAAGGCCATACAAGA+TGG | + | chr5.3:76408651-76408670 | MS.gene64603:CDS | 35.0% | |
| TCAAACTCTACTGACATTTC+CGG | + | chr5.3:76406435-76406454 | MS.gene64603:CDS | 35.0% | |
| TCACTAAGAACATGATTGGA+TGG | + | chr5.3:76407523-76407542 | MS.gene64603:intron | 35.0% | |
| TCAGACTTTCCATATTTGCA+TGG | + | chr5.3:76408920-76408939 | MS.gene64603:intron | 35.0% | |
| TCAGCATTAGGACAAGAAAT+CGG | - | chr5.3:76407965-76407984 | None:intergenic | 35.0% | |
| TCAGTATTTCCTAAGAATGC+AGG | + | chr5.3:76410463-76410482 | MS.gene64603:CDS | 35.0% | |
| TCTCAAATTGACAACATCAC+TGG | - | chr5.3:76406075-76406094 | None:intergenic | 35.0% | |
| TGGTTGAACATTCAGGTAAA+TGG | + | chr5.3:76406841-76406860 | MS.gene64603:intron | 35.0% | |
| TGTTAGTAATAGGACTCCTA+AGG | + | chr5.3:76409452-76409471 | MS.gene64603:intron | 35.0% | |
| TTAGGACAAGAAATCGGATA+AGG | - | chr5.3:76407959-76407978 | None:intergenic | 35.0% | |
| TTCAGGGTGCAAAAATTAAC+GGG | + | chr5.3:76410626-76410645 | MS.gene64603:CDS | 35.0% | |
| TTGACGTGGAACGATATAAA+AGG | + | chr5.3:76408840-76408859 | MS.gene64603:CDS | 35.0% | |
| TTGAGAGATAACAGACTTGA+TGG | - | chr5.3:76411114-76411133 | None:intergenic | 35.0% | |
| TTGTTATGGACAGTAACTCA+GGG | + | chr5.3:76406721-76406740 | MS.gene64603:intron | 35.0% | |
| TTTATCAAGACGTTTGCTTC+TGG | + | chr5.3:76407169-76407188 | MS.gene64603:CDS | 35.0% | |
| TTTCTTCTCAGATTCAACTG+TGG | + | chr5.3:76410588-76410607 | MS.gene64603:CDS | 35.0% | |
| ! | AGTTGGTATGACTGATTATC+TGG | + | chr5.3:76409820-76409839 | MS.gene64603:intron | 35.0% |
| ! | ATGTTTCTACGAAAACTGAG+AGG | - | chr5.3:76410537-76410556 | None:intergenic | 35.0% |
| ! | ATTGGTTTCTATTTGGGCAT+TGG | + | chr5.3:76410075-76410094 | MS.gene64603:intron | 35.0% |
| ! | GAGTATCTATGAGCAGTTTT+AGG | - | chr5.3:76410667-76410686 | None:intergenic | 35.0% |
| ! | GCTTTTCCACAATGTTTGTT+TGG | - | chr5.3:76410501-76410520 | None:intergenic | 35.0% |
| ! | GTGTGTTATTACCCAAGTTT+AGG | - | chr5.3:76411183-76411202 | None:intergenic | 35.0% |
| ! | TGTCTTTAGGTTTCTCAATC+AGG | + | chr5.3:76407090-76407109 | MS.gene64603:CDS | 35.0% |
| ! | TTTGTTATGGACAGTAACTC+AGG | + | chr5.3:76406720-76406739 | MS.gene64603:intron | 35.0% |
| ! | TTTTGCTTCCATCTTAGACT+AGG | + | chr5.3:76408049-76408068 | MS.gene64603:intron | 35.0% |
| !! | AGAGGAAAATAAAGGCATTC+GGG | + | chr5.3:76409622-76409641 | MS.gene64603:intron | 35.0% |
| !! | CAGAGGAAAATAAAGGCATT+CGG | + | chr5.3:76409621-76409640 | MS.gene64603:intron | 35.0% |
| !! | CTGGTAAGTTTAACTTGTGT+CGG | + | chr5.3:76406556-76406575 | MS.gene64603:intron | 35.0% |
| !! | CTTATTTTCTGGATCATGCA+GGG | - | chr5.3:76409875-76409894 | None:intergenic | 35.0% |
| !!! | ATATAAACTTTTTGGCTCCC+TGG | - | chr5.3:76410292-76410311 | None:intergenic | 35.0% |
| !!! | TCTTATTTTCTGGATCATGC+AGG | - | chr5.3:76409876-76409895 | None:intergenic | 35.0% |
| !!! | TTTTTTCACTGAGGAGCTTT+TGG | + | chr5.3:76410948-76410967 | MS.gene64603:intron | 35.0% |
| AAAAGACTTCCTGGTTGAAC+AGG | - | chr5.3:76411220-76411239 | None:intergenic | 40.0% | |
| AAAATGAGAAGCCCAAAGTG+TGG | + | chr5.3:76410774-76410793 | MS.gene64603:intron | 40.0% | |
| AACATCCACACCATCTTGTA+TGG | - | chr5.3:76408664-76408683 | None:intergenic | 40.0% | |
| AACCACCCAAACAAACATTG+TGG | + | chr5.3:76410492-76410511 | MS.gene64603:CDS | 40.0% | |
| AACTAACCTATTGCTTCGGA+TGG | - | chr5.3:76407430-76407449 | None:intergenic | 40.0% | |
| AAGAAGCAAGCAGAAACCTT+AGG | - | chr5.3:76411400-76411419 | None:intergenic | 40.0% | |
| AAGTGTGGAGAGTTTACACT+AGG | + | chr5.3:76410789-76410808 | MS.gene64603:intron | 40.0% | |
| AATTGGGCCTGATACTATTG+AGG | + | chr5.3:76410730-76410749 | MS.gene64603:intron | 40.0% | |
| ACATCACCCTCAATAGTATC+AGG | - | chr5.3:76410740-76410759 | None:intergenic | 40.0% | |
| ACCAAGACTCTCGAATTTCT+TGG | + | chr5.3:76409704-76409723 | MS.gene64603:intron | 40.0% | |
| ACTCGCCGTTATCAATGAAT+TGG | - | chr5.3:76407369-76407388 | None:intergenic | 40.0% | |
| ACTTCATCTTTAGTCAAGGG+AGG | - | chr5.3:76411289-76411308 | None:intergenic | 40.0% | |
| AGATCAAGCTCTCGAATTCA+TGG | + | chr5.3:76409671-76409690 | MS.gene64603:intron | 40.0% | |
| AGGTTTGTGGTTGAACATTC+AGG | + | chr5.3:76406834-76406853 | MS.gene64603:CDS | 40.0% | |
| AGTGTAAACTCTCCACACTT+TGG | - | chr5.3:76410789-76410808 | None:intergenic | 40.0% | |
| ATCTCAAAGTATGGAGCAAG+TGG | + | chr5.3:76408600-76408619 | MS.gene64603:CDS | 40.0% | |
| ATGGAGAAATTTGTAGGGGA+TGG | - | chr5.3:76407730-76407749 | None:intergenic | 40.0% | |
| ATTGCTTCGGATGGAGTTAA+AGG | - | chr5.3:76407421-76407440 | None:intergenic | 40.0% | |
| ATTGGGCCTGATACTATTGA+GGG | + | chr5.3:76410731-76410750 | MS.gene64603:intron | 40.0% | |
| CAACAACGATGAACACTATG+CGG | - | chr5.3:76408536-76408555 | None:intergenic | 40.0% | |
| CAATTGACGAAAGATGCAGT+TGG | + | chr5.3:76406387-76406406 | MS.gene64603:CDS | 40.0% | |
| CACAGAAAAATAGCCACTTG+TGG | - | chr5.3:76406505-76406524 | None:intergenic | 40.0% | |
| CACCTTTGTCGTATGTTTAG+AGG | - | chr5.3:76408251-76408270 | None:intergenic | 40.0% | |
| CAGCAATGAGTTTGTATCTC+AGG | + | chr5.3:76410558-76410577 | MS.gene64603:CDS | 40.0% | |
| CAGTAGTACAGAGCTATTAG+TGG | - | chr5.3:76410320-76410339 | None:intergenic | 40.0% | |
| CCAAGACTCTCGAATTTCTT+GGG | + | chr5.3:76409705-76409724 | MS.gene64603:intron | 40.0% | |
| CCATCAACCAATCAGACTTA+TGG | + | chr5.3:76407124-76407143 | MS.gene64603:CDS | 40.0% | |
| CCTGTTCAATTGTCAAAGGA+CGG | + | chr5.3:76408693-76408712 | MS.gene64603:CDS | 40.0% | |
| CGATGACGTACTCAAATTAG+TGG | + | chr5.3:76406798-76406817 | MS.gene64603:CDS | 40.0% | |
| CGTCCTTTGACAATTGAACA+GGG | - | chr5.3:76408695-76408714 | None:intergenic | 40.0% | |
| CTCTGTACTACTGAAGTTCA+AGG | + | chr5.3:76410327-76410346 | MS.gene64603:CDS | 40.0% | |
| CTGTTCAATTGTCAAAGGAC+GGG | + | chr5.3:76408694-76408713 | MS.gene64603:CDS | 40.0% | |
| CTTCATCTTTAGTCAAGGGA+GGG | - | chr5.3:76411288-76411307 | None:intergenic | 40.0% | |
| GACTTTCCATATTTGCATGG+TGG | + | chr5.3:76408923-76408942 | MS.gene64603:intron | 40.0% | |
| GAGTTTGAAAGGTTGAGATC+TGG | - | chr5.3:76406423-76406442 | None:intergenic | 40.0% | |
| GATGGAAGCAAAAATGCAGA+AGG | - | chr5.3:76408042-76408061 | None:intergenic | 40.0% | |
| GATTGGGATAAAGGATAGGT+AGG | + | chr5.3:76409645-76409664 | MS.gene64603:intron | 40.0% | |
| GCGGCAAGTCATTAACAAAA+TGG | - | chr5.3:76407469-76407488 | None:intergenic | 40.0% | |
| GGAGATCAACTCGTTTATTC+AGG | + | chr5.3:76410609-76410628 | MS.gene64603:CDS | 40.0% | |
| GTGTAAACTCTCCACACTTT+GGG | - | chr5.3:76410788-76410807 | None:intergenic | 40.0% | |
| GTTAAACTTACCAGTGACAC+TGG | - | chr5.3:76406550-76406569 | None:intergenic | 40.0% | |
| GTTACAAAGCCTGCATTCTT+AGG | - | chr5.3:76410475-76410494 | None:intergenic | 40.0% | |
| TAAGCAGAGTCACTAGAATC+AGG | - | chr5.3:76406315-76406334 | None:intergenic | 40.0% | |
| TATATTTCATCACCTGAGGC+TGG | + | chr5.3:76407019-76407038 | MS.gene64603:CDS | 40.0% | |
| TCCCTTGACTAAAGATGAAG+TGG | + | chr5.3:76411288-76411307 | MS.gene64603:CDS | 40.0% | |
| TCTACAACCACATACCTCTT+TGG | + | chr5.3:76407240-76407259 | MS.gene64603:CDS | 40.0% | |
| TGAATGTTCAACCACAAACC+TGG | - | chr5.3:76406835-76406854 | None:intergenic | 40.0% | |
| TGGAGAAATTTGTAGGGGAT+GGG | - | chr5.3:76407729-76407748 | None:intergenic | 40.0% | |
| TTAACTCCATCCGAAGCAAT+AGG | + | chr5.3:76407421-76407440 | MS.gene64603:CDS | 40.0% | |
| TTCCACAATGTTTGTTTGGG+TGG | - | chr5.3:76410497-76410516 | None:intergenic | 40.0% | |
| TTGAAAGGTTGAGATCTGGA+AGG | - | chr5.3:76406419-76406438 | None:intergenic | 40.0% | |
| TTGTTACGACACTTGTGAGT+AGG | + | chr5.3:76409933-76409952 | MS.gene64603:intron | 40.0% | |
| TTGTTCCCAAGGGATACATA+TGG | + | chr5.3:76407197-76407216 | MS.gene64603:CDS | 40.0% | |
| TTTGGTTGAAGTAACTCAGC+AGG | - | chr5.3:76410046-76410065 | None:intergenic | 40.0% | |
| ! | ATCTCACATGGTGGTTTTTC+GGG | + | chr5.3:76406282-76406301 | MS.gene64603:CDS | 40.0% |
| ! | CATCTCACATGGTGGTTTTT+CGG | + | chr5.3:76406281-76406300 | MS.gene64603:CDS | 40.0% |
| ! | CCATAAGTCTGATTGGTTGA+TGG | - | chr5.3:76407127-76407146 | None:intergenic | 40.0% |
| ! | CTCTCACACACCTTTTTGTT+GGG | - | chr5.3:76410876-76410895 | None:intergenic | 40.0% |
| ! | GCACGATTTCCATCATTTTG+TGG | + | chr5.3:76408510-76408529 | MS.gene64603:intron | 40.0% |
| ! | GTACAGAGCTATTAGTGGAT+TGG | - | chr5.3:76410315-76410334 | None:intergenic | 40.0% |
| ! | TAACTCAGGGAGTATACAGT+AGG | + | chr5.3:76406734-76406753 | MS.gene64603:CDS | 40.0% |
| ! | TCTGGAATTCTTGTTCCCAA+GGG | + | chr5.3:76407187-76407206 | MS.gene64603:CDS | 40.0% |
| !! | AAATAAAGGCATTCGGGGAT+TGG | + | chr5.3:76409628-76409647 | MS.gene64603:intron | 40.0% |
| !! | AATAAAGGCATTCGGGGATT+GGG | + | chr5.3:76409629-76409648 | MS.gene64603:intron | 40.0% |
| !! | AATTGGAGGTATTCAGCAAG+AGG | - | chr5.3:76407352-76407371 | None:intergenic | 40.0% |
| !! | GAGGAAAATAAAGGCATTCG+GGG | + | chr5.3:76409623-76409642 | MS.gene64603:intron | 40.0% |
| !! | GGCCTTGTTATATGCTAAGT+TGG | - | chr5.3:76408643-76408662 | None:intergenic | 40.0% |
| !! | TATGCTAAGTTGGTACAAGC+TGG | - | chr5.3:76408633-76408652 | None:intergenic | 40.0% |
| !! | TTCTGGAATTCTTGTTCCCA+AGG | + | chr5.3:76407186-76407205 | MS.gene64603:CDS | 40.0% |
| !!! | CACAAGTGGCTATTTTTCTG+TGG | + | chr5.3:76406503-76406522 | MS.gene64603:CDS | 40.0% |
| !!! | GGCAGTAAGTTTTTTCACTG+AGG | + | chr5.3:76410939-76410958 | MS.gene64603:intron | 40.0% |
| AACCACAAACCTGGTGTTTG+TGG | - | chr5.3:76406826-76406845 | None:intergenic | 45.0% | |
| AAGCTCTCGAATTCATGGAG+GGG | + | chr5.3:76409676-76409695 | MS.gene64603:intron | 45.0% | |
| ACAGGCCATATGTATCCCTT+GGG | - | chr5.3:76407205-76407224 | None:intergenic | 45.0% | |
| ACCACAAACCTGGTGTTTGT+GGG | - | chr5.3:76406825-76406844 | None:intergenic | 45.0% | |
| ACTATGCGGCCACAAAATGA+TGG | - | chr5.3:76408522-76408541 | None:intergenic | 45.0% | |
| ACTTACCAGTGACACTGGAT+AGG | - | chr5.3:76406545-76406564 | None:intergenic | 45.0% | |
| AGCAAAAATGCAGAAGGTCG+TGG | - | chr5.3:76408036-76408055 | None:intergenic | 45.0% | |
| AGCCTATCTTGCAGAAAAGC+AGG | + | chr5.3:76410210-76410229 | MS.gene64603:CDS | 45.0% | |
| AGCTACAAACACAGCAAGAC+TGG | - | chr5.3:76411428-76411447 | None:intergenic | 45.0% | |
| AGGCGTCTTGATCATTGTTG+AGG | + | chr5.3:76409349-76409368 | MS.gene64603:CDS | 45.0% | |
| AGGGCCATTTACTCCATAGT+TGG | + | chr5.3:76409803-76409822 | MS.gene64603:intron | 45.0% | |
| AGGTACTTGTTCTTGCCATG+CGG | + | chr5.3:76407873-76407892 | MS.gene64603:intron | 45.0% | |
| AGTGTCCCTGAGATCAAATC+TGG | + | chr5.3:76408795-76408814 | MS.gene64603:CDS | 45.0% | |
| ATCAGTCAGCACACCATCAA+CGG | - | chr5.3:76407395-76407414 | None:intergenic | 45.0% | |
| ATTGAGGCTGCAGGGAAAAT+AGG | - | chr5.3:76409215-76409234 | None:intergenic | 45.0% | |
| ATTTGTAGGGGATGGGATCA+TGG | - | chr5.3:76407722-76407741 | None:intergenic | 45.0% | |
| CAAGCTCTCGAATTCATGGA+GGG | + | chr5.3:76409675-76409694 | MS.gene64603:intron | 45.0% | |
| CCCAAGAAATTCGAGAGTCT+TGG | - | chr5.3:76409708-76409727 | None:intergenic | 45.0% | |
| CCGTCCTTTGACAATTGAAC+AGG | - | chr5.3:76408696-76408715 | None:intergenic | 45.0% | |
| CGCCGTTATCAATGAATTGG+AGG | - | chr5.3:76407366-76407385 | None:intergenic | 45.0% | |
| CTGCCCTGTTCAATTGTCAA+AGG | + | chr5.3:76408689-76408708 | MS.gene64603:CDS | 45.0% | |
| CTGGTAGACAAGCTCGTATT+TGG | - | chr5.3:76410359-76410378 | None:intergenic | 45.0% | |
| GCAAAAATGCAGAAGGTCGT+GGG | - | chr5.3:76408035-76408054 | None:intergenic | 45.0% | |
| GCAGATTGCTTTGCTCACAT+AGG | + | chr5.3:76408399-76408418 | MS.gene64603:intron | 45.0% | |
| GCAGGCCTTTCAAAGTAACA+AGG | - | chr5.3:76409851-76409870 | None:intergenic | 45.0% | |
| GCCTATCTTGCAGAAAAGCA+GGG | + | chr5.3:76410211-76410230 | MS.gene64603:CDS | 45.0% | |
| GGCAACAATGCTACAAGAAG+AGG | + | chr5.3:76408420-76408439 | MS.gene64603:CDS | 45.0% | |
| GGCATGAAAAACCAAGAGGA+CGG | - | chr5.3:76408175-76408194 | None:intergenic | 45.0% | |
| GGGTTACCACCATGCAAATA+TGG | - | chr5.3:76408932-76408951 | None:intergenic | 45.0% | |
| GGTTGAACAGGTTGCATGTA+GGG | - | chr5.3:76411208-76411227 | None:intergenic | 45.0% | |
| GTTAATGGTGTACCCACAAG+TGG | + | chr5.3:76406489-76406508 | MS.gene64603:CDS | 45.0% | |
| TACAGGCCATATGTATCCCT+TGG | - | chr5.3:76407206-76407225 | None:intergenic | 45.0% | |
| TACATGCAACCTGTTCAACC+AGG | + | chr5.3:76411208-76411227 | MS.gene64603:CDS | 45.0% | |
| TACTATTGAGGGTGATGTGC+TGG | + | chr5.3:76410742-76410761 | MS.gene64603:intron | 45.0% | |
| TATATCCTCAGCAGCAGCAT+TGG | - | chr5.3:76410407-76410426 | None:intergenic | 45.0% | |
| TCAAGCTCTCGAATTCATGG+AGG | + | chr5.3:76409674-76409693 | MS.gene64603:intron | 45.0% | |
| TCTGTATGGAACACACTCAC+AGG | + | chr5.3:76405781-76405800 | MS.gene64603:CDS | 45.0% | |
| TGAGAAAGGGGCCAATATTG+AGG | - | chr5.3:76409231-76409250 | None:intergenic | 45.0% | |
| TGGTTGAACAGGTTGCATGT+AGG | - | chr5.3:76411209-76411228 | None:intergenic | 45.0% | |
| TTGAGGCTGCAGGGAAAATA+GGG | - | chr5.3:76409214-76409233 | None:intergenic | 45.0% | |
| TTGCACATCACACCATAGAG+CGG | - | chr5.3:76406370-76406389 | None:intergenic | 45.0% | |
| TTTCCCTGCAGCCTCAATAT+TGG | + | chr5.3:76409217-76409236 | MS.gene64603:intron | 45.0% | |
| TTTGTAGGGGATGGGATCAT+GGG | - | chr5.3:76407721-76407740 | None:intergenic | 45.0% | |
| ! | CAAAAAGGTGTGTGAGAGGA+AGG | + | chr5.3:76410878-76410897 | MS.gene64603:intron | 45.0% |
| ! | CCAACAAAAAGGTGTGTGAG+AGG | + | chr5.3:76410874-76410893 | MS.gene64603:intron | 45.0% |
| ! | CCTCTCACACACCTTTTTGT+TGG | - | chr5.3:76410877-76410896 | None:intergenic | 45.0% |
| ! | GAAGCTAGTTTGAGCAACTG+TGG | - | chr5.3:76408760-76408779 | None:intergenic | 45.0% |
| ! | TACCAGATTGACGAGAGTGT+CGG | + | chr5.3:76410373-76410392 | MS.gene64603:CDS | 45.0% |
| ! | TCTGAGACCAAAGAGGTATG+TGG | - | chr5.3:76407250-76407269 | None:intergenic | 45.0% |
| !! | AGAAGGTGCCTAGTCTAAGA+TGG | - | chr5.3:76408060-76408079 | None:intergenic | 45.0% |
| !! | GTCCCATCGTTCTTAGCTTT+TGG | - | chr5.3:76409275-76409294 | None:intergenic | 45.0% |
| !! | TCCCTGCTTTTCTGCAAGAT+AGG | - | chr5.3:76410215-76410234 | None:intergenic | 45.0% |
| !!! | GCTGGAGCTATTTTAGCAAC+CGG | - | chr5.3:76411331-76411350 | None:intergenic | 45.0% |
| AACCTTAGGCTGTGCGTTTC+CGG | - | chr5.3:76411386-76411405 | None:intergenic | 50.0% | |
| ACTAGGCACCTTCTCTAGAC+AGG | + | chr5.3:76408066-76408085 | MS.gene64603:intron | 50.0% | |
| AGTAGGTCACCCCTTCTTGA+TGG | + | chr5.3:76406751-76406770 | MS.gene64603:CDS | 50.0% | |
| ATCACACCATAGAGCGGCAT+TGG | - | chr5.3:76406364-76406383 | None:intergenic | 50.0% | |
| ATCCCCTACCTGTCTAGAGA+AGG | - | chr5.3:76408077-76408096 | None:intergenic | 50.0% | |
| CAAGGCCATACAAGATGGTG+TGG | + | chr5.3:76408656-76408675 | MS.gene64603:CDS | 50.0% | |
| CACCTTCTCTAGACAGGTAG+GGG | + | chr5.3:76408072-76408091 | MS.gene64603:intron | 50.0% | |
| CACGGCCAGATTTGATCTCA+GGG | - | chr5.3:76408803-76408822 | None:intergenic | 50.0% | |
| CCACAAACCTGGTGTTTGTG+GGG | - | chr5.3:76406824-76406843 | None:intergenic | 50.0% | |
| CGGGGATTGGGATAAAGGAT+AGG | + | chr5.3:76409641-76409660 | MS.gene64603:intron | 50.0% | |
| CTTCTCAGAAAACCAGCCTC+AGG | - | chr5.3:76407034-76407053 | None:intergenic | 50.0% | |
| GCACCTTCTCTAGACAGGTA+GGG | + | chr5.3:76408071-76408090 | MS.gene64603:intron | 50.0% | |
| GCATTCGGGGATTGGGATAA+AGG | + | chr5.3:76409636-76409655 | MS.gene64603:intron | 50.0% | |
| GGTACTTGTTCTTGCCATGC+GGG | + | chr5.3:76407874-76407893 | MS.gene64603:intron | 50.0% | |
| GTGTGTGCACCATCAGCATT+AGG | - | chr5.3:76407977-76407996 | None:intergenic | 50.0% | |
| TACGTCATTGCCTCCAGCTA+TGG | + | chr5.3:76411255-76411274 | MS.gene64603:CDS | 50.0% | |
| TATTGAGGGTGATGTGCTGG+TGG | + | chr5.3:76410745-76410764 | MS.gene64603:intron | 50.0% | |
| TCACACCATAGAGCGGCATT+GGG | - | chr5.3:76406363-76406382 | None:intergenic | 50.0% | |
| TCTTTAGTCAAGGGAGGGAG+TGG | - | chr5.3:76411283-76411302 | None:intergenic | 50.0% | |
| TGAACAGGTTGCATGTAGGG+AGG | - | chr5.3:76411205-76411224 | None:intergenic | 50.0% | |
| TGTGAGAGGAAGGAGTAGGT+AGG | + | chr5.3:76410888-76410907 | MS.gene64603:intron | 50.0% | |
| TTAGCAACCGGAGGCAAAGA+TGG | - | chr5.3:76411319-76411338 | None:intergenic | 50.0% | |
| ! | ATTGAGGGTGATGTGCTGGT+GGG | + | chr5.3:76410746-76410765 | MS.gene64603:intron | 50.0% |
| ! | CACTGAGGAGCTTTTGGTCT+GGG | + | chr5.3:76410954-76410973 | MS.gene64603:intron | 50.0% |
| ! | TCACTGAGGAGCTTTTGGTC+TGG | + | chr5.3:76410953-76410972 | MS.gene64603:intron | 50.0% |
| ! | TTTTGCAGGAAGTCCACCAC+TGG | + | chr5.3:76406257-76406276 | MS.gene64603:intron | 50.0% |
| !! | ATTGGGTGTGCTGGTTTGTG+CGG | - | chr5.3:76406346-76406365 | None:intergenic | 50.0% |
| !!! | GGAGCTATTTTAGCAACCGG+AGG | - | chr5.3:76411328-76411347 | None:intergenic | 50.0% |
| AACGGCGAGTTCACCGTTGA+TGG | + | chr5.3:76407379-76407398 | MS.gene64603:CDS | 55.0% | |
| ACCTTAGGCTGTGCGTTTCC+GGG | - | chr5.3:76411385-76411404 | None:intergenic | 55.0% | |
| CACCGACACTCTCGTCAATC+TGG | - | chr5.3:76410378-76410397 | None:intergenic | 55.0% | |
| CCACCACTGGTCATCTCACA+TGG | + | chr5.3:76406270-76406289 | MS.gene64603:CDS | 55.0% | |
| CCACCATGTGAGATGACCAG+TGG | - | chr5.3:76406276-76406295 | None:intergenic | 55.0% | |
| CCACGGCCAGATTTGATCTC+AGG | - | chr5.3:76408804-76408823 | None:intergenic | 55.0% | |
| CCACTGGTCATCTCACATGG+TGG | + | chr5.3:76406273-76406292 | MS.gene64603:CDS | 55.0% | |
| CCATGTGAGATGACCAGTGG+TGG | - | chr5.3:76406273-76406292 | None:intergenic | 55.0% | |
| CCCCACAAACACCAGGTTTG+TGG | + | chr5.3:76406821-76406840 | MS.gene64603:CDS | 55.0% | |
| CCTGAGATCAAATCTGGCCG+TGG | + | chr5.3:76408801-76408820 | MS.gene64603:CDS | 55.0% | |
| CTCTAGACAGGTAGGGGATC+TGG | + | chr5.3:76408078-76408097 | MS.gene64603:intron | 55.0% | |
| GAGAGCCTATCCAGTGTCAC+TGG | + | chr5.3:76406537-76406556 | MS.gene64603:CDS | 55.0% | |
| GGCACCTTCTCTAGACAGGT+AGG | + | chr5.3:76408070-76408089 | MS.gene64603:intron | 55.0% | |
| GGGCCAATATTGAGGCTGCA+GGG | - | chr5.3:76409223-76409242 | None:intergenic | 55.0% | |
| GGTAGAGCCATCTTTGCCTC+CGG | + | chr5.3:76411309-76411328 | MS.gene64603:CDS | 55.0% | |
| GGTCTCAGACGCGCATAAAG+CGG | + | chr5.3:76407261-76407280 | MS.gene64603:CDS | 55.0% | |
| GGTGTGTGAGAGGAAGGAGT+AGG | + | chr5.3:76410884-76410903 | MS.gene64603:intron | 55.0% | |
| GTCTCAGACGCGCATAAAGC+GGG | + | chr5.3:76407262-76407281 | MS.gene64603:CDS | 55.0% | |
| TCTCAGACGCGCATAAAGCG+GGG | + | chr5.3:76407263-76407282 | MS.gene64603:CDS | 55.0% | |
| TGCAGAAGGTCGTGGGTGTT+TGG | - | chr5.3:76408028-76408047 | None:intergenic | 55.0% | |
| TGCTACCAATGCTGCTGCTG+AGG | + | chr5.3:76410399-76410418 | MS.gene64603:CDS | 55.0% | |
| TTAGTGGCCCCACAAACACC+AGG | + | chr5.3:76406814-76406833 | MS.gene64603:CDS | 55.0% | |
| TTCTGGATCATGCAGGGTGC+AGG | - | chr5.3:76409869-76409888 | None:intergenic | 55.0% | |
| ! | ATGCGCGTCTGAGACCAAAG+AGG | - | chr5.3:76407257-76407276 | None:intergenic | 55.0% |
| !! | AGTTTGTAGGAGCACCCGCA+TGG | - | chr5.3:76407891-76407910 | None:intergenic | 55.0% |
| !! | GGGAAATGTGAGTGCTGAGC+TGG | + | chr5.3:76410832-76410851 | MS.gene64603:intron | 55.0% |
| ACCCGGAAACGCACAGCCTA+AGG | + | chr5.3:76411381-76411400 | MS.gene64603:CDS | 60.0% | |
| GCACACCCAATGCCGCTCTA+TGG | + | chr5.3:76406355-76406374 | MS.gene64603:CDS | 60.0% | |
| GGGGCCAATATTGAGGCTGC+AGG | - | chr5.3:76409224-76409243 | None:intergenic | 60.0% | |
| TAGGCTGTGCGTTTCCGGGT+GGG | - | chr5.3:76411381-76411400 | None:intergenic | 60.0% | |
| TTAGGCTGTGCGTTTCCGGG+TGG | - | chr5.3:76411382-76411401 | None:intergenic | 60.0% | |
| ! | AGCGAAACGAAGAGAGCGCG+TGG | - | chr5.3:76405715-76405734 | None:intergenic | 60.0% |
| ! | TAGAGCGGCATTGGGTGTGC+TGG | - | chr5.3:76406355-76406374 | None:intergenic | 60.0% |
| AGACGCGCATAAAGCGGGGC+TGG | + | chr5.3:76407267-76407286 | MS.gene64603:CDS | 65.0% | |
| AGGCTGTGCGTTTCCGGGTG+GGG | - | chr5.3:76411380-76411399 | None:intergenic | 65.0% | |
| CCAGCTGTTAGCCCTGCTGC+CGG | + | chr5.3:76411346-76411365 | MS.gene64603:CDS | 65.0% | |
| GGAGGGAGTGGAGCCATAGC+TGG | - | chr5.3:76411271-76411290 | None:intergenic | 65.0% | |
| GGGAGTGGAGCCATAGCTGG+AGG | - | chr5.3:76411268-76411287 | None:intergenic | 65.0% | |
| TGCGTTTCCGGGTGGGGACT+TGG | - | chr5.3:76411374-76411393 | None:intergenic | 65.0% | |
| ! | GGGACTTGGTTCCGGCAGCA+GGG | - | chr5.3:76411360-76411379 | None:intergenic | 65.0% |
| ! | TCCGGGTGGGGACTTGGTTC+CGG | - | chr5.3:76411368-76411387 | None:intergenic | 65.0% |
| CCGGCAGCAGGGCTAACAGC+TGG | - | chr5.3:76411349-76411368 | None:intergenic | 70.0% | |
| GCCGGAACCAAGTCCCCACC+CGG | + | chr5.3:76411364-76411383 | MS.gene64603:CDS | 70.0% | |
| ! | GGGGACTTGGTTCCGGCAGC+AGG | - | chr5.3:76411361-76411380 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 76405703 | 76411465 | 76405703 | ID=MS.gene64603 |
| chr5.3 | mRNA | 76405703 | 76411465 | 76405703 | ID=MS.gene64603.t1;Parent=MS.gene64603 |
| chr5.3 | exon | 76405703 | 76405802 | 76405703 | ID=MS.gene64603.t1.exon1;Parent=MS.gene64603.t1 |
| chr5.3 | CDS | 76405703 | 76405802 | 76405703 | ID=cds.MS.gene64603.t1;Parent=MS.gene64603.t1 |
| chr5.3 | exon | 76406265 | 76406558 | 76406265 | ID=MS.gene64603.t1.exon2;Parent=MS.gene64603.t1 |
| chr5.3 | CDS | 76406265 | 76406558 | 76406265 | ID=cds.MS.gene64603.t1;Parent=MS.gene64603.t1 |
| chr5.3 | exon | 76406734 | 76406855 | 76406734 | ID=MS.gene64603.t1.exon3;Parent=MS.gene64603.t1 |
| chr5.3 | CDS | 76406734 | 76406855 | 76406734 | ID=cds.MS.gene64603.t1;Parent=MS.gene64603.t1 |
| chr5.3 | exon | 76406941 | 76407442 | 76406941 | ID=MS.gene64603.t1.exon4;Parent=MS.gene64603.t1 |
| chr5.3 | CDS | 76406941 | 76407442 | 76406941 | ID=cds.MS.gene64603.t1;Parent=MS.gene64603.t1 |
| chr5.3 | exon | 76408403 | 76408441 | 76408403 | ID=MS.gene64603.t1.exon5;Parent=MS.gene64603.t1 |
| chr5.3 | CDS | 76408403 | 76408441 | 76408403 | ID=cds.MS.gene64603.t1;Parent=MS.gene64603.t1 |
| chr5.3 | exon | 76408586 | 76408870 | 76408586 | ID=MS.gene64603.t1.exon6;Parent=MS.gene64603.t1 |
| chr5.3 | CDS | 76408586 | 76408870 | 76408586 | ID=cds.MS.gene64603.t1;Parent=MS.gene64603.t1 |
| chr5.3 | exon | 76409228 | 76409370 | 76409228 | ID=MS.gene64603.t1.exon7;Parent=MS.gene64603.t1 |
| chr5.3 | CDS | 76409228 | 76409370 | 76409228 | ID=cds.MS.gene64603.t1;Parent=MS.gene64603.t1 |
| chr5.3 | exon | 76410205 | 76410688 | 76410205 | ID=MS.gene64603.t1.exon8;Parent=MS.gene64603.t1 |
| chr5.3 | CDS | 76410205 | 76410688 | 76410205 | ID=cds.MS.gene64603.t1;Parent=MS.gene64603.t1 |
| chr5.3 | exon | 76411170 | 76411465 | 76411170 | ID=MS.gene64603.t1.exon9;Parent=MS.gene64603.t1 |
| chr5.3 | CDS | 76411170 | 76411465 | 76411170 | ID=cds.MS.gene64603.t1;Parent=MS.gene64603.t1 |
| Gene Sequence |
| Protein sequence |
