Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63842.t1 | XP_003617676.1 | 94.2 | 754 | 44 | 0 | 1 | 754 | 1 | 754 | 0.00E+00 | 1390.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63842.t1 | Q9FJ62 | 55.1 | 766 | 324 | 8 | 3 | 754 | 7 | 766 | 1.2e-236 | 820.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63842.t1 | G7K4B9 | 94.2 | 754 | 44 | 0 | 1 | 754 | 1 | 754 | 0.0e+00 | 1390.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene060072 | MS.gene63842 | PPI |
| MS.gene64603 | MS.gene63842 | PPI |
| MS.gene63842 | MS.gene79189 | PPI |
| MS.gene63842 | MS.gene020669 | PPI |
| MS.gene62515 | MS.gene63842 | PPI |
| MS.gene81414 | MS.gene63842 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63842.t1 | MTR_5g094230 | 94.164 | 754 | 44 | 0 | 1 | 754 | 1 | 754 | 0.0 | 1382 |
| MS.gene63842.t1 | MTR_5g094230 | 93.636 | 660 | 41 | 1 | 1 | 660 | 1 | 659 | 0.0 | 1224 |
| MS.gene63842.t1 | MTR_3g055610 | 60.172 | 698 | 266 | 4 | 16 | 712 | 21 | 707 | 0.0 | 843 |
| MS.gene63842.t1 | MTR_2g450160 | 46.542 | 694 | 352 | 12 | 29 | 714 | 185 | 867 | 0.0 | 589 |
| MS.gene63842.t1 | MTR_4g131380 | 44.737 | 684 | 358 | 14 | 29 | 711 | 44 | 708 | 0.0 | 544 |
| MS.gene63842.t1 | MTR_4g109600 | 27.350 | 351 | 216 | 15 | 14 | 331 | 11 | 355 | 2.85e-19 | 91.3 |
| MS.gene63842.t1 | MTR_4g109600 | 24.000 | 325 | 214 | 8 | 358 | 657 | 48 | 364 | 2.08e-18 | 88.6 |
| MS.gene63842.t1 | MTR_4g109600 | 28.571 | 182 | 112 | 6 | 14 | 180 | 11 | 189 | 6.97e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63842.t1 | AT5G55480 | 55.091 | 766 | 324 | 8 | 3 | 754 | 7 | 766 | 0.0 | 858 |
| MS.gene63842.t1 | AT4G26690 | 57.066 | 743 | 313 | 4 | 15 | 754 | 20 | 759 | 0.0 | 853 |
| MS.gene63842.t1 | AT1G66970 | 56.198 | 726 | 311 | 4 | 13 | 734 | 26 | 748 | 0.0 | 835 |
| MS.gene63842.t1 | AT1G66970 | 54.545 | 748 | 311 | 5 | 13 | 734 | 26 | 770 | 0.0 | 822 |
| MS.gene63842.t1 | AT1G66980 | 53.020 | 745 | 329 | 7 | 13 | 754 | 27 | 753 | 0.0 | 790 |
| MS.gene63842.t1 | AT1G66980 | 53.867 | 724 | 323 | 6 | 13 | 733 | 27 | 742 | 0.0 | 790 |
| MS.gene63842.t1 | AT1G66980 | 51.793 | 753 | 323 | 7 | 13 | 733 | 27 | 771 | 0.0 | 776 |
| MS.gene63842.t1 | AT1G66980 | 52.210 | 724 | 318 | 7 | 13 | 733 | 27 | 725 | 0.0 | 751 |
| MS.gene63842.t1 | AT3G20520 | 50.000 | 756 | 336 | 13 | 1 | 742 | 1 | 728 | 0.0 | 711 |
| MS.gene63842.t1 | AT5G58170 | 46.759 | 725 | 377 | 7 | 29 | 751 | 33 | 750 | 0.0 | 664 |
| MS.gene63842.t1 | AT5G58050 | 46.993 | 715 | 371 | 6 | 29 | 742 | 33 | 740 | 0.0 | 661 |
| MS.gene63842.t1 | AT1G66970 | 58.378 | 555 | 226 | 3 | 184 | 734 | 1 | 554 | 0.0 | 656 |
| MS.gene63842.t1 | AT1G74210 | 25.485 | 361 | 229 | 10 | 358 | 693 | 47 | 392 | 1.24e-21 | 98.2 |
| MS.gene63842.t1 | AT5G08030 | 23.647 | 351 | 229 | 10 | 335 | 659 | 28 | 365 | 8.46e-20 | 92.4 |
| MS.gene63842.t1 | AT5G08030 | 25.948 | 343 | 214 | 14 | 17 | 331 | 24 | 354 | 1.58e-16 | 82.8 |
| MS.gene63842.t1 | AT5G08030 | 23.647 | 351 | 229 | 10 | 335 | 659 | 43 | 380 | 1.26e-19 | 92.4 |
| MS.gene63842.t1 | AT5G08030 | 25.948 | 343 | 214 | 14 | 17 | 331 | 39 | 369 | 2.21e-16 | 82.4 |
Find 163 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTAGGCTGTGCGTTTC+CGG | 0.112510 | 5.1:-75259697 | None:intergenic |
| AAATAAAACTATGAATTATT+TGG | 0.161651 | 5.1:+75254869 | MS.gene63842:CDS |
| ACTATGAATTATTTGGTTAA+TGG | 0.169991 | 5.1:+75254876 | MS.gene63842:CDS |
| GTCCCATCGTTCTTAGCTTT+TGG | 0.221469 | 5.1:-75257588 | None:intergenic |
| GGGGACTTGGTTCCGGCAGC+AGG | 0.249174 | 5.1:-75259672 | None:intergenic |
| ATTGCTTCGGATGGAGTTAA+AGG | 0.260576 | 5.1:-75255820 | None:intergenic |
| GGAGATCAACTCGTTTATTC+AGG | 0.277238 | 5.1:+75258925 | MS.gene63842:CDS |
| TAGTGACTCTGCTTACATTT+TGG | 0.288259 | 5.1:+75254722 | MS.gene63842:CDS |
| TTTATCAAGACGTTTGCTTC+TGG | 0.293432 | 5.1:+75255571 | MS.gene63842:CDS |
| TCAAACTCTACTGACATTTC+CGG | 0.294696 | 5.1:+75254837 | MS.gene63842:CDS |
| CTGGTAGACAAGCTCATATT+TGG | 0.295485 | 5.1:-75258672 | None:intergenic |
| AAACAACGAAACTTGTCTTT+AGG | 0.308071 | 5.1:+75255479 | MS.gene63842:CDS |
| GTTACAAAGCCTGCATTCTT+AGG | 0.310121 | 5.1:-75258788 | None:intergenic |
| TCTACAACCACATACCTCTT+TGG | 0.317456 | 5.1:+75255642 | MS.gene63842:CDS |
| TGCGTTTCCGGGTGGGGACT+TGG | 0.323178 | 5.1:-75259685 | None:intergenic |
| TTGACGTGGAACGATATAAA+AGG | 0.338935 | 5.1:+75257156 | MS.gene63842:CDS |
| TCCGGGTGGGGACTTGGTTC+CGG | 0.339707 | 5.1:-75259679 | None:intergenic |
| TCTCAAAATACACATTGTTC+AGG | 0.340050 | 5.1:+75257562 | MS.gene63842:CDS |
| TGTCTTTAGGTTTCTCAATC+AGG | 0.343222 | 5.1:+75255492 | MS.gene63842:CDS |
| ACCTTAGGCTGTGCGTTTCC+GGG | 0.346580 | 5.1:-75259696 | None:intergenic |
| TTTCCCTGCAGCCTCAATAT+TGG | 0.348515 | 5.1:+75257533 | MS.gene63842:intron |
| CCGTCCTTTGACAATTGAAC+AGG | 0.364554 | 5.1:-75257009 | None:intergenic |
| ACCTTGATTATCTCAAAGTA+TGG | 0.371442 | 5.1:+75256907 | MS.gene63842:CDS |
| AGGTTTGTGGTTGAACATTC+AGG | 0.373506 | 5.1:+75255236 | MS.gene63842:CDS |
| AAAAGACTTCCTGGTTGAAC+AGG | 0.375785 | 5.1:-75259531 | None:intergenic |
| CCATCAACCAATCAGACTTA+TGG | 0.375817 | 5.1:+75255526 | MS.gene63842:CDS |
| GAGTTTGAAAGGTTGAGATC+TGG | 0.385464 | 5.1:-75254822 | None:intergenic |
| CAATGAACCATAAGTCTGAT+TGG | 0.392275 | 5.1:-75255533 | None:intergenic |
| GTGTGCTATTACCCAAGTTT+AGG | 0.396246 | 5.1:-75259494 | None:intergenic |
| GCACACCCAATGCTGCTCTA+TGG | 0.397902 | 5.1:+75254757 | MS.gene63842:CDS |
| TTAACTCCATCCGAAGCAAT+AGG | 0.402132 | 5.1:+75255823 | MS.gene63842:CDS |
| GTCTCAGACGCGCATAAAGC+GGG | 0.404052 | 5.1:+75255664 | MS.gene63842:CDS |
| GGAGGGAGTGGAGCCATAGC+TGG | 0.404849 | 5.1:-75259582 | None:intergenic |
| CAGCAATGAGTTTGTATCTC+AGG | 0.417176 | 5.1:+75258874 | MS.gene63842:CDS |
| AACCACAAACCTGGTGTTTG+TGG | 0.421581 | 5.1:-75255225 | None:intergenic |
| CCACGGCCAGATTTGATCTC+AGG | 0.423046 | 5.1:-75257117 | None:intergenic |
| ACTCGCCGTTATCAATGAAT+TGG | 0.424311 | 5.1:-75255768 | None:intergenic |
| AGCTACAAACACAGCAAGAC+TGG | 0.428801 | 5.1:-75259739 | None:intergenic |
| AATTGACGAAAGATGCATTT+GGG | 0.429339 | 5.1:+75254790 | MS.gene63842:CDS |
| CACCGACACTCTCGTCAATC+TGG | 0.430471 | 5.1:-75258691 | None:intergenic |
| CAGTAGTACAGAGCTATTAG+TGG | 0.434008 | 5.1:-75258633 | None:intergenic |
| TTCTGGAATTCTTGTTCCCA+AGG | 0.435786 | 5.1:+75255588 | MS.gene63842:CDS |
| ACCACAAACCTGGTGTTTGT+GGG | 0.438220 | 5.1:-75255224 | None:intergenic |
| AGGCTGTGCGTTTCCGGGTG+GGG | 0.442083 | 5.1:-75259691 | None:intergenic |
| CCCCACAAACACCAGGTTTG+TGG | 0.442553 | 5.1:+75255223 | MS.gene63842:CDS |
| TTCCACAATGTTTGTTTGGG+TGG | 0.446707 | 5.1:-75258810 | None:intergenic |
| AGGAAACAAATGCCTAAACT+TGG | 0.454432 | 5.1:+75259482 | MS.gene63842:intron |
| CAATTGACGAAAGATGCATT+TGG | 0.454486 | 5.1:+75254789 | MS.gene63842:CDS |
| TACAGGCCATATGTATCCCT+TGG | 0.455587 | 5.1:-75255605 | None:intergenic |
| CCGGCAGCAGGGCTAACAGC+TGG | 0.455897 | 5.1:-75259660 | None:intergenic |
| AAGAAATAGAGAAAGTGAAA+CGG | 0.456445 | 5.1:-75254127 | None:intergenic |
| TAAGCAGAGTCACTAGAATC+AGG | 0.457095 | 5.1:-75254714 | None:intergenic |
| TAGAGCAGCATTGGGTGTGC+TGG | 0.457253 | 5.1:-75254754 | None:intergenic |
| TTCTGTGGATTACAACTTCG+AGG | 0.463615 | 5.1:+75254920 | MS.gene63842:CDS |
| AACGGCGAGTTCACCGTTGA+TGG | 0.464152 | 5.1:+75255781 | MS.gene63842:CDS |
| ACCCGGAAACGCACAGCCTA+AGG | 0.467508 | 5.1:+75259695 | MS.gene63842:CDS |
| CTCTGTACTACTGAAGTTCA+AGG | 0.467715 | 5.1:+75258643 | MS.gene63842:CDS |
| CGATGACGTACTCAAATTAG+TGG | 0.468576 | 5.1:+75255200 | MS.gene63842:CDS |
| GGTTGAACAGGTTGCATGTA+GGG | 0.469907 | 5.1:-75259519 | None:intergenic |
| AACATCCACACCATCTTGTA+TGG | 0.470788 | 5.1:-75256977 | None:intergenic |
| TAGGCTGTGCGTTTCCGGGT+GGG | 0.471034 | 5.1:-75259692 | None:intergenic |
| AGTGTCCCTGAGATCAAATC+TGG | 0.477767 | 5.1:+75257111 | MS.gene63842:CDS |
| ATTGATGCTTTAAGTAAAGC+AGG | 0.478140 | 5.1:+75258572 | MS.gene63842:CDS |
| AGCCTATCTTGCAGAAAAGC+AGG | 0.479317 | 5.1:+75258526 | MS.gene63842:CDS |
| GGCCTTGTTATATGCTAAGT+TGG | 0.479777 | 5.1:-75256956 | None:intergenic |
| ATCACACCATAGAGCAGCAT+TGG | 0.482301 | 5.1:-75254763 | None:intergenic |
| AAAATTATTGCCATCGAGAA+GGG | 0.482787 | 5.1:-75255163 | None:intergenic |
| TTGTTCCCAAGGGATACATA+TGG | 0.482867 | 5.1:+75255599 | MS.gene63842:CDS |
| TCTTTAGTCAAGGGAGGGAG+TGG | 0.485453 | 5.1:-75259594 | None:intergenic |
| GGTAGAGCCACCTTTGCCTC+CGG | 0.487014 | 5.1:+75259623 | MS.gene63842:CDS |
| TCAGTATTTCCTAAGAATGC+AGG | 0.488361 | 5.1:+75258779 | MS.gene63842:CDS |
| AACTAACCTATTGCTTCGGA+TGG | 0.492784 | 5.1:-75255829 | None:intergenic |
| TATATTTCATCACCTGAGGC+TGG | 0.492792 | 5.1:+75255421 | MS.gene63842:CDS |
| TCCATACTTTGAGATAATCA+AGG | 0.493201 | 5.1:-75256908 | None:intergenic |
| AAATAACTAACCTATTGCTT+CGG | 0.495365 | 5.1:-75255833 | None:intergenic |
| AGACGCGCATAAAGCGGGGC+TGG | 0.495580 | 5.1:+75255669 | MS.gene63842:CDS |
| TACGTCATTGCCTCCAGCTA+TGG | 0.500167 | 5.1:+75259569 | MS.gene63842:CDS |
| CCATAAGTCTGATTGGTTGA+TGG | 0.501602 | 5.1:-75255526 | None:intergenic |
| TGAGAAAGGGGCCAATATTG+AGG | 0.506432 | 5.1:-75257544 | None:intergenic |
| TAAAATTATTGCCATCGAGA+AGG | 0.510386 | 5.1:-75255164 | None:intergenic |
| CGCCGTTATCAATGAATTGG+AGG | 0.511228 | 5.1:-75255765 | None:intergenic |
| TTTGTTATGGACAGTAACTC+AGG | 0.514192 | 5.1:+75255122 | MS.gene63842:intron |
| GTACAGAGCTATTAGTGGAT+TGG | 0.514412 | 5.1:-75258628 | None:intergenic |
| TACCACTTCATCTTTAGTCA+AGG | 0.517506 | 5.1:-75259604 | None:intergenic |
| TACCTCCAATTCATTGATAA+CGG | 0.520729 | 5.1:+75255763 | MS.gene63842:CDS |
| CCAGCTGTTAGCCCTGCTGC+CGG | 0.521576 | 5.1:+75259660 | MS.gene63842:CDS |
| TATATCCTCAGCAGCAGCAT+TGG | 0.525009 | 5.1:-75258720 | None:intergenic |
| TATGCTAAGTTGGTACAAGC+TGG | 0.526959 | 5.1:-75256946 | None:intergenic |
| AAGAAGCAAGCAGAAACCTT+AGG | 0.531271 | 5.1:-75259711 | None:intergenic |
| CTCAAACTAAGAGATCTGTA+TGG | 0.533713 | 5.1:+75254169 | MS.gene63842:CDS |
| ACAGGCCATATGTATCCCTT+GGG | 0.536205 | 5.1:-75255604 | None:intergenic |
| TCCCTTGACTAAAGATGAAG+TGG | 0.540141 | 5.1:+75259602 | MS.gene63842:CDS |
| AGATAAAGACTAGCATCTAC+AGG | 0.544336 | 5.1:-75255622 | None:intergenic |
| CTGTTCAATTGTCAAAGGAC+GGG | 0.548143 | 5.1:+75257010 | MS.gene63842:CDS |
| AAATGTCAGTAGAGTTTGAA+AGG | 0.549442 | 5.1:-75254833 | None:intergenic |
| ACCACTTCATCTTTAGTCAA+GGG | 0.551508 | 5.1:-75259603 | None:intergenic |
| GCAGATTGCTTTGCTCACAT+AGG | 0.553113 | 5.1:+75256718 | MS.gene63842:intron |
| ATCTCAAAGTATGGAGCAAG+TGG | 0.553378 | 5.1:+75256916 | MS.gene63842:CDS |
| CTTCTCAGAAAACCAGCCTC+AGG | 0.554552 | 5.1:-75255433 | None:intergenic |
| CCACAAACCTGGTGTTTGTG+GGG | 0.555126 | 5.1:-75255223 | None:intergenic |
| TGAATGTTCAACCACAAACC+TGG | 0.555219 | 5.1:-75255234 | None:intergenic |
| GGGACTTGGTTCCGGCAGCA+GGG | 0.563994 | 5.1:-75259671 | None:intergenic |
| GAGATCAACTCGTTTATTCA+GGG | 0.565693 | 5.1:+75258926 | MS.gene63842:CDS |
| CTGCCCTGTTCAATTGTCAA+AGG | 0.566143 | 5.1:+75257005 | MS.gene63842:CDS |
| GAGGACCTATCCAGTGTCAC+TGG | 0.566555 | 5.1:+75254939 | MS.gene63842:CDS |
| GCCGGAACCAAGTCCCCACC+CGG | 0.567617 | 5.1:+75259678 | MS.gene63842:CDS |
| TGGTTGAACAGGTTGCATGT+AGG | 0.568699 | 5.1:-75259520 | None:intergenic |
| ATCCAAAAGCTAAGAACGAT+GGG | 0.569878 | 5.1:+75257586 | MS.gene63842:CDS |
| TCACACCATAGAGCAGCATT+GGG | 0.572298 | 5.1:-75254762 | None:intergenic |
| GTTAAACTTACCAGTGACAC+TGG | 0.574347 | 5.1:-75254949 | None:intergenic |
| CCTGAGATCAAATCTGGCCG+TGG | 0.575011 | 5.1:+75257117 | MS.gene63842:CDS |
| TCTGGAATTCTTGTTCCCAA+GGG | 0.575619 | 5.1:+75255589 | MS.gene63842:CDS |
| GGGAGTGGAGCCATAGCTGG+AGG | 0.575933 | 5.1:-75259579 | None:intergenic |
| CCTGTTCAATTGTCAAAGGA+CGG | 0.576981 | 5.1:+75257009 | MS.gene63842:CDS |
| GGCAACAATGCTACAAGAAG+AGG | 0.577262 | 5.1:+75256739 | MS.gene63842:CDS |
| AGGCGTCTTGATCATTGTTG+AGG | 0.579463 | 5.1:+75257665 | MS.gene63842:CDS |
| CACGGCCAGATTTGATCTCA+GGG | 0.585180 | 5.1:-75257116 | None:intergenic |
| CCACCACTGGTCATCTCACA+TGG | 0.586798 | 5.1:+75254672 | MS.gene63842:CDS |
| GTTAATGGTGTACCCACAAG+TGG | 0.588215 | 5.1:+75254891 | MS.gene63842:CDS |
| TTAGGCTGTGCGTTTCCGGG+TGG | 0.588372 | 5.1:-75259693 | None:intergenic |
| TATAACAAGGCCATACAAGA+TGG | 0.590025 | 5.1:+75256967 | MS.gene63842:CDS |
| TCTGTATGGAACACACTCAC+AGG | 0.590984 | 5.1:+75254183 | MS.gene63842:CDS |
| ACTTACCAGTGACACTGGAT+AGG | 0.593132 | 5.1:-75254944 | None:intergenic |
| TGCTACCAATGCTGCTGCTG+AGG | 0.595624 | 5.1:+75258715 | MS.gene63842:CDS |
| TACATGCAACCTGTTCAACC+AGG | 0.595870 | 5.1:+75259522 | MS.gene63842:CDS |
| TTGTTATGGACAGTAACTCA+GGG | 0.596068 | 5.1:+75255123 | MS.gene63842:intron |
| CAAGGCCATACAAGATGGTG+TGG | 0.598251 | 5.1:+75256972 | MS.gene63842:CDS |
| CTTCATCTTTAGTCAAGGGA+GGG | 0.599472 | 5.1:-75259599 | None:intergenic |
| ATCAGTCAGCACACCATCAA+CGG | 0.599870 | 5.1:-75255794 | None:intergenic |
| AGTGAAACGGAGAGAGCGCG+TGG | 0.600672 | 5.1:-75254114 | None:intergenic |
| GGAAACAAATGCCTAAACTT+GGG | 0.602318 | 5.1:+75259483 | MS.gene63842:intron |
| GGTCTCAGACGCGCATAAAG+CGG | 0.603491 | 5.1:+75255663 | MS.gene63842:CDS |
| AAAGCAGGTTATGATAAACC+AGG | 0.604916 | 5.1:+75258587 | MS.gene63842:CDS |
| ATTGGGTGTGCTGGTTTGTG+CGG | 0.606217 | 5.1:-75254745 | None:intergenic |
| TTAGTGGCCCCACAAACACC+AGG | 0.609710 | 5.1:+75255216 | MS.gene63842:CDS |
| AATTGGAGGTATTCAGCAAG+AGG | 0.612012 | 5.1:-75255751 | None:intergenic |
| ACTTCATCTTTAGTCAAGGG+AGG | 0.615576 | 5.1:-75259600 | None:intergenic |
| CAGTTATATTTCATCACCTG+AGG | 0.615753 | 5.1:+75255417 | MS.gene63842:CDS |
| TTAGCAACCGGAGGCAAAGG+TGG | 0.617419 | 5.1:-75259630 | None:intergenic |
| GCCTATCTTGCAGAAAAGCA+GGG | 0.620294 | 5.1:+75258527 | MS.gene63842:CDS |
| AATCCAAAAGCTAAGAACGA+TGG | 0.625091 | 5.1:+75257585 | MS.gene63842:CDS |
| CGTCCTTTGACAATTGAACA+GGG | 0.625425 | 5.1:-75257008 | None:intergenic |
| TAACTCAGGGAGTATACAGT+AGG | 0.632133 | 5.1:+75255136 | MS.gene63842:CDS |
| TCTGAGACCAAAGAGGTATG+TGG | 0.634462 | 5.1:-75255649 | None:intergenic |
| AGTAGGTCACCCCTTCTCGA+TGG | 0.634782 | 5.1:+75255153 | MS.gene63842:CDS |
| TAAAGCATCAATGACAGCAT+CGG | 0.637207 | 5.1:-75258561 | None:intergenic |
| AAATTATTGCCATCGAGAAG+GGG | 0.638369 | 5.1:-75255162 | None:intergenic |
| TTTCTTCTCAGATTCAACTG+TGG | 0.657126 | 5.1:+75258904 | MS.gene63842:CDS |
| TTGAAAGGTTGAGATCTGGA+AGG | 0.659984 | 5.1:-75254818 | None:intergenic |
| TACCAGATTGACGAGAGTGT+CGG | 0.667983 | 5.1:+75258689 | MS.gene63842:CDS |
| TAATTTGAGTACGTCATCGA+CGG | 0.669275 | 5.1:-75255196 | None:intergenic |
| GAAGCTAGTTTGAGCAACTG+TGG | 0.669967 | 5.1:-75257073 | None:intergenic |
| AACCACCCAAACAAACATTG+TGG | 0.671201 | 5.1:+75258808 | MS.gene63842:CDS |
| AAGCAGGTTATGATAAACCA+GGG | 0.675378 | 5.1:+75258588 | MS.gene63842:CDS |
| TCTCAGACGCGCATAAAGCG+GGG | 0.675654 | 5.1:+75255665 | MS.gene63842:CDS |
| AGTTGAACGAAAATATGCCA+CGG | 0.677502 | 5.1:-75257134 | None:intergenic |
| CCACTGGTCATCTCACATGG+TGG | 0.682552 | 5.1:+75254675 | MS.gene63842:CDS |
| ATGCGCGTCTGAGACCAAAG+AGG | 0.682558 | 5.1:-75255656 | None:intergenic |
| CCATGTGAGATGACCAGTGG+TGG | 0.695620 | 5.1:-75254672 | None:intergenic |
| TGAACAGGTTGCATGTAGGG+AGG | 0.700757 | 5.1:-75259516 | None:intergenic |
| TACCAACTTAGCATATAACA+AGG | 0.705932 | 5.1:+75256954 | MS.gene63842:CDS |
| ATGTTTCTACGAAAACTGAG+AGG | 0.710248 | 5.1:-75258850 | None:intergenic |
| CCACCATGTGAGATGACCAG+TGG | 0.782734 | 5.1:-75254675 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAACTATGAATTATT+TGG | + | chr5.1:75254869-75254888 | MS.gene63842:CDS | 10.0% |
| !!! | AAATAATTCATAGTTTTATT+TGG | - | chr5.1:75254870-75254889 | None:intergenic | 10.0% |
| !!! | AATAATTCATAGTTTTATTT+GGG | - | chr5.1:75254869-75254888 | None:intergenic | 10.0% |
| !! | AAGTAAAACAAAGTTAATTA+AGG | - | chr5.1:75259379-75259398 | None:intergenic | 15.0% |
| !! | ATGATAATTTCTTATATGAA+AGG | - | chr5.1:75256431-75256450 | None:intergenic | 15.0% |
| !! | ATTATTAAATGATGAAGAAA+TGG | - | chr5.1:75259307-75259326 | None:intergenic | 15.0% |
| !! | ATTCAATGAATATATTGATA+TGG | - | chr5.1:75256068-75256087 | None:intergenic | 15.0% |
| !! | TAAGAATTTATCAATTGAAT+TGG | + | chr5.1:75256101-75256120 | MS.gene63842:intron | 15.0% |
| !! | TATAAGATTATGTTAGTAAT+AGG | + | chr5.1:75257758-75257777 | MS.gene63842:intron | 15.0% |
| !! | TGATAATTTCTTATATGAAA+GGG | - | chr5.1:75256430-75256449 | None:intergenic | 15.0% |
| !!! | AAATTAGTTTCTTTATCTTA+AGG | + | chr5.1:75254552-75254571 | MS.gene63842:intron | 15.0% |
| !!! | TTGCTGTTATATATTTTAAA+TGG | + | chr5.1:75256006-75256025 | MS.gene63842:intron | 15.0% |
| !!! | TTTATTTTTTTTGAAGGAAA+TGG | - | chr5.1:75259340-75259359 | None:intergenic | 15.0% |
| !! | AAAAAGAAGAAAAATAGTGT+GGG | + | chr5.1:75259128-75259147 | MS.gene63842:intron | 20.0% |
| !! | AAAAGTAAATAAGCAATGAT+TGG | - | chr5.1:75255974-75255993 | None:intergenic | 20.0% |
| !! | AACAAAGTTAATTAAGGAAA+TGG | - | chr5.1:75259373-75259392 | None:intergenic | 20.0% |
| !! | AAGCATACATATATATTCTA+AGG | - | chr5.1:75256641-75256660 | None:intergenic | 20.0% |
| !! | AATCAAATTCATTCTATTTG+CGG | - | chr5.1:75255890-75255909 | None:intergenic | 20.0% |
| !! | ACTATGAATTATTTGGTTAA+TGG | + | chr5.1:75254876-75254895 | MS.gene63842:CDS | 20.0% |
| !! | TAAATGATACATAATCAAGT+TGG | + | chr5.1:75256129-75256148 | MS.gene63842:intron | 20.0% |
| !! | TACAATCATTGTTCAATAAT+AGG | + | chr5.1:75256231-75256250 | MS.gene63842:intron | 20.0% |
| !! | TGAGTAGGATATAATAAAAA+TGG | + | chr5.1:75258264-75258283 | MS.gene63842:intron | 20.0% |
| !! | TGATAGAATGAATTATATAC+AGG | - | chr5.1:75257714-75257733 | None:intergenic | 20.0% |
| !!! | GATATTTAGTTTTGTTGTTA+TGG | + | chr5.1:75254980-75254999 | MS.gene63842:intron | 20.0% |
| !!! | GCATTAAAAAATTGTGTTTT+AGG | + | chr5.1:75257336-75257355 | MS.gene63842:intron | 20.0% |
| !!! | GTGAGTTTTCAAATTTATTA+TGG | + | chr5.1:75255086-75255105 | MS.gene63842:intron | 20.0% |
| !!! | TCAATTGATTTTAAGCAAAA+TGG | - | chr5.1:75257039-75257058 | None:intergenic | 20.0% |
| !!! | TTTCTGAAATCTTTTTGTTA+TGG | + | chr5.1:75255109-75255128 | MS.gene63842:intron | 20.0% |
| ! | AAATAACTAACCTATTGCTT+CGG | - | chr5.1:75255836-75255855 | None:intergenic | 25.0% |
| ! | AAGAAATAGAGAAAGTGAAA+CGG | - | chr5.1:75254130-75254149 | None:intergenic | 25.0% |
| ! | AATTATACTGTACCATTGAT+AGG | + | chr5.1:75259018-75259037 | MS.gene63842:intron | 25.0% |
| ! | AGTGCAAATTTAATGGTTTA+GGG | + | chr5.1:75258100-75258119 | MS.gene63842:intron | 25.0% |
| ! | ATAGGATAATCAAAGATTCA+TGG | + | chr5.1:75257385-75257404 | MS.gene63842:intron | 25.0% |
| ! | ATGATCCAGAAAATAAGAAT+AGG | + | chr5.1:75258194-75258213 | MS.gene63842:intron | 25.0% |
| ! | ATGCATCAAAAGAATCTATT+AGG | - | chr5.1:75254424-75254443 | None:intergenic | 25.0% |
| ! | ATTGATATGGAGAAATTTGT+AGG | - | chr5.1:75256055-75256074 | None:intergenic | 25.0% |
| ! | CTAGAAATTATTGATCAACA+AGG | - | chr5.1:75256799-75256818 | None:intergenic | 25.0% |
| ! | GAAAAAGAAGAAAAATAGTG+TGG | + | chr5.1:75259127-75259146 | MS.gene63842:intron | 25.0% |
| ! | GAATTATATACAGGACTAAT+AGG | - | chr5.1:75257705-75257724 | None:intergenic | 25.0% |
| ! | GATTTGATCAAAATTGAGTA+AGG | + | chr5.1:75255906-75255925 | MS.gene63842:intron | 25.0% |
| ! | TAGGATAATCAAAGATTCAT+GGG | + | chr5.1:75257386-75257405 | MS.gene63842:intron | 25.0% |
| ! | TAGTGCAAATTTAATGGTTT+AGG | + | chr5.1:75258099-75258118 | MS.gene63842:intron | 25.0% |
| ! | TCAACCAAAGAAAAACAAAT+TGG | + | chr5.1:75258373-75258392 | MS.gene63842:intron | 25.0% |
| ! | TCAGATTAGTGCAAATTTAA+TGG | + | chr5.1:75258093-75258112 | MS.gene63842:intron | 25.0% |
| ! | TCTGAATAATATTTAACTGC+TGG | - | chr5.1:75257221-75257240 | None:intergenic | 25.0% |
| ! | TCTTTAGTCTCTATTTAAGA+AGG | + | chr5.1:75256672-75256691 | MS.gene63842:intron | 25.0% |
| ! | TTAACTTTACAATCTTGGTA+AGG | + | chr5.1:75256169-75256188 | MS.gene63842:intron | 25.0% |
| ! | TTGATATGGAGAAATTTGTA+GGG | - | chr5.1:75256054-75256073 | None:intergenic | 25.0% |
| ! | TTGATTATGTATCATTTAGC+AGG | - | chr5.1:75256127-75256146 | None:intergenic | 25.0% |
| ! | TTGTTAAACTTGATATGGTT+AGG | + | chr5.1:75259234-75259253 | MS.gene63842:intron | 25.0% |
| !! | ACAATGATTGTATAGTTTGT+AGG | - | chr5.1:75256223-75256242 | None:intergenic | 25.0% |
| !! | AGTTAGTTTAAGAACAAACA+AGG | - | chr5.1:75255299-75255318 | None:intergenic | 25.0% |
| !! | ATAGAACTTTCTTTGACTTA+CGG | - | chr5.1:75257188-75257207 | None:intergenic | 25.0% |
| !! | ATTTGAAACAAAGAGTTTGT+AGG | - | chr5.1:75258446-75258465 | None:intergenic | 25.0% |
| !! | CTAGTTTAACTTTACAATCT+TGG | + | chr5.1:75256164-75256183 | MS.gene63842:intron | 25.0% |
| !!! | AACAATGTGTATTTTGAGAA+AGG | - | chr5.1:75257561-75257580 | None:intergenic | 25.0% |
| !!! | ACAATGTGTATTTTGAGAAA+GGG | - | chr5.1:75257560-75257579 | None:intergenic | 25.0% |
| !!! | GAAACCAATTTGTTTTTCTT+TGG | - | chr5.1:75258380-75258399 | None:intergenic | 25.0% |
| !!! | GTTAAACAACTTTGTTTTTC+AGG | + | chr5.1:75254645-75254664 | MS.gene63842:intron | 25.0% |
| !!! | TATCTCCTATTCTTATTTTC+TGG | - | chr5.1:75258202-75258221 | None:intergenic | 25.0% |
| !!! | TGAGTTTGTTAAACTTGATA+TGG | + | chr5.1:75259229-75259248 | MS.gene63842:intron | 25.0% |
| !!! | TGGATTGGATATAAACTTTT+TGG | - | chr5.1:75258616-75258635 | None:intergenic | 25.0% |
| AAAAATCAGACTTCTCTATC+AGG | + | chr5.1:75257645-75257664 | MS.gene63842:CDS | 30.0% | |
| AAAATTATTGCCATCGAGAA+GGG | - | chr5.1:75255166-75255185 | None:intergenic | 30.0% | |
| AAACAACGAAACTTGTCTTT+AGG | + | chr5.1:75255479-75255498 | MS.gene63842:CDS | 30.0% | |
| AAATGTCAGTAGAGTTTGAA+AGG | - | chr5.1:75254836-75254855 | None:intergenic | 30.0% | |
| AATTAGACTTAGAAGAGTCT+GGG | - | chr5.1:75257268-75257287 | None:intergenic | 30.0% | |
| AATTGACGAAAGATGCATTT+GGG | + | chr5.1:75254790-75254809 | MS.gene63842:CDS | 30.0% | |
| ACCATTGATAGGAGTTTAAT+TGG | + | chr5.1:75259029-75259048 | MS.gene63842:intron | 30.0% | |
| ACCTTGATTATCTCAAAGTA+TGG | + | chr5.1:75256907-75256926 | MS.gene63842:CDS | 30.0% | |
| AGCTTAGAACTTCACTTTAT+AGG | + | chr5.1:75257367-75257386 | MS.gene63842:intron | 30.0% | |
| ATAATCAGTCATACCAACTA+TGG | - | chr5.1:75258135-75258154 | None:intergenic | 30.0% | |
| ATTCAGGGTGCAAAAATTAA+CGG | + | chr5.1:75258941-75258960 | MS.gene63842:CDS | 30.0% | |
| CCATTGATAGGAGTTTAATT+GGG | + | chr5.1:75259030-75259049 | MS.gene63842:intron | 30.0% | |
| GCATTATAAATAAGTTGCAG+AGG | + | chr5.1:75257920-75257939 | MS.gene63842:intron | 30.0% | |
| GGGAAGAATCATAAATTTGT+AGG | + | chr5.1:75254610-75254629 | MS.gene63842:intron | 30.0% | |
| GTATGTTTAGAGGATGTAAA+AGG | - | chr5.1:75256560-75256579 | None:intergenic | 30.0% | |
| TAAAATTATTGCCATCGAGA+AGG | - | chr5.1:75255167-75255186 | None:intergenic | 30.0% | |
| TAAGTTGCAGAGGAAAATAA+AGG | + | chr5.1:75257930-75257949 | MS.gene63842:intron | 30.0% | |
| TACCAACTTAGCATATAACA+AGG | + | chr5.1:75256954-75256973 | MS.gene63842:CDS | 30.0% | |
| TACCTCCAATTCATTGATAA+CGG | + | chr5.1:75255763-75255782 | MS.gene63842:CDS | 30.0% | |
| TCAAAAGAATCTATTAGGAC+AGG | - | chr5.1:75254419-75254438 | None:intergenic | 30.0% | |
| TCTCAAAATACACATTGTTC+AGG | + | chr5.1:75257562-75257581 | MS.gene63842:CDS | 30.0% | |
| TGACAGTATGGATAGTTAAT+AGG | - | chr5.1:75256515-75256534 | None:intergenic | 30.0% | |
| TGATATGGAGAAATTTGTAG+GGG | - | chr5.1:75256053-75256072 | None:intergenic | 30.0% | |
| TGATGAAGAAAATGACAGTA+TGG | - | chr5.1:75256527-75256546 | None:intergenic | 30.0% | |
| TTCGTGAAGAAATACTAGAA+CGG | - | chr5.1:75258334-75258353 | None:intergenic | 30.0% | |
| ! | AGTATCTATGAGCAGTTTTA+GGG | - | chr5.1:75258982-75259001 | None:intergenic | 30.0% |
| ! | ATTGATGCTTTAAGTAAAGC+AGG | + | chr5.1:75258572-75258591 | MS.gene63842:CDS | 30.0% |
| ! | ATTGTTCTCTATTCTTTTGC+AGG | + | chr5.1:75259462-75259481 | MS.gene63842:intron | 30.0% |
| ! | CAAAAGCGAAATGTTTTCAA+TGG | - | chr5.1:75257419-75257438 | None:intergenic | 30.0% |
| ! | CATTGAAAACATTTCGCTTT+TGG | + | chr5.1:75257417-75257436 | MS.gene63842:intron | 30.0% |
| ! | CTTTTCCACAATGTTTGTTT+GGG | - | chr5.1:75258816-75258835 | None:intergenic | 30.0% |
| ! | GTTATGGATTCAGTATTTTG+TGG | + | chr5.1:75254996-75255015 | MS.gene63842:intron | 30.0% |
| ! | TAGAACTTTCTTTGACTTAC+GGG | - | chr5.1:75257187-75257206 | None:intergenic | 30.0% |
| !! | AAAAACATTTGCTAGTTCTG+TGG | + | chr5.1:75258742-75258761 | MS.gene63842:CDS | 30.0% |
| !! | AAGACAAGTTTCGTTGTTTT+TGG | - | chr5.1:75255478-75255497 | None:intergenic | 30.0% |
| !! | CAATGTGTATTTTGAGAAAG+GGG | - | chr5.1:75257559-75257578 | None:intergenic | 30.0% |
| !! | CCAGTTTAACTTTGTCTTTT+GGG | + | chr5.1:75254590-75254609 | MS.gene63842:intron | 30.0% |
| !! | CTTTTCTATGTTTAGCTTAC+TGG | + | chr5.1:75255064-75255083 | MS.gene63842:intron | 30.0% |
| !! | TCCAGTTTAACTTTGTCTTT+TGG | + | chr5.1:75254589-75254608 | MS.gene63842:intron | 30.0% |
| !! | TCCATACTTTGAGATAATCA+AGG | - | chr5.1:75256911-75256930 | None:intergenic | 30.0% |
| !! | TCTATCTGATTCTGAGATTA+TGG | - | chr5.1:75257309-75257328 | None:intergenic | 30.0% |
| !!! | AGACAAGTTTCGTTGTTTTT+GGG | - | chr5.1:75255477-75255496 | None:intergenic | 30.0% |
| !!! | AGTTTTATTTGGGAAAACAC+CGG | - | chr5.1:75254859-75254878 | None:intergenic | 30.0% |
| AAAGCAGGTTATGATAAACC+AGG | + | chr5.1:75258587-75258606 | MS.gene63842:CDS | 35.0% | |
| AAATTATTGCCATCGAGAAG+GGG | - | chr5.1:75255165-75255184 | None:intergenic | 35.0% | |
| AAGCAGGTTATGATAAACCA+GGG | + | chr5.1:75258588-75258607 | MS.gene63842:CDS | 35.0% | |
| AATAGGCATGAAAAACCAAG+AGG | - | chr5.1:75256498-75256517 | None:intergenic | 35.0% | |
| AATCCAAAAGCTAAGAACGA+TGG | + | chr5.1:75257585-75257604 | MS.gene63842:CDS | 35.0% | |
| ACAGAAAAATAGCCACTTGT+GGG | - | chr5.1:75254906-75254925 | None:intergenic | 35.0% | |
| ACCACTTCATCTTTAGTCAA+GGG | - | chr5.1:75259606-75259625 | None:intergenic | 35.0% | |
| ACTTTACAATCTTGGTAAGG+AGG | + | chr5.1:75256172-75256191 | MS.gene63842:intron | 35.0% | |
| AGAGGACGGAAATCTTTATA+AGG | - | chr5.1:75256480-75256499 | None:intergenic | 35.0% | |
| AGATAAAGACTAGCATCTAC+AGG | - | chr5.1:75255625-75255644 | None:intergenic | 35.0% | |
| AGGAAACAAATGCCTAAACT+TGG | + | chr5.1:75259482-75259501 | MS.gene63842:intron | 35.0% | |
| AGGAGAGTAAATCATGAAAG+TGG | - | chr5.1:75255279-75255298 | None:intergenic | 35.0% | |
| AGTAGATTCTCCCAACAAAA+AGG | + | chr5.1:75259179-75259198 | MS.gene63842:intron | 35.0% | |
| AGTTGAACGAAAATATGCCA+CGG | - | chr5.1:75257137-75257156 | None:intergenic | 35.0% | |
| ATACTAGAACGGAAATTCAC+AGG | - | chr5.1:75258323-75258342 | None:intergenic | 35.0% | |
| ATCCAAAAGCTAAGAACGAT+GGG | + | chr5.1:75257586-75257605 | MS.gene63842:CDS | 35.0% | |
| ATCCTCTAAACATACGACAA+AGG | + | chr5.1:75256565-75256584 | MS.gene63842:intron | 35.0% | |
| ATGACTGAAAAAAGACTTCC+TGG | - | chr5.1:75259543-75259562 | None:intergenic | 35.0% | |
| ATTCTATAACTTCTGCCCTT+AGG | - | chr5.1:75257787-75257806 | None:intergenic | 35.0% | |
| ATTGGGATAAAGGATAGGTA+GGG | + | chr5.1:75257962-75257981 | MS.gene63842:intron | 35.0% | |
| ATTTCTTGTCCTAATGCTGA+TGG | + | chr5.1:75256284-75256303 | MS.gene63842:intron | 35.0% | |
| CAATGAACCATAAGTCTGAT+TGG | - | chr5.1:75255536-75255555 | None:intergenic | 35.0% | |
| CAATTAGACTTAGAAGAGTC+TGG | - | chr5.1:75257269-75257288 | None:intergenic | 35.0% | |
| CAATTGACGAAAGATGCATT+TGG | + | chr5.1:75254789-75254808 | MS.gene63842:CDS | 35.0% | |
| CAGTTATATTTCATCACCTG+AGG | + | chr5.1:75255417-75255436 | MS.gene63842:CDS | 35.0% | |
| CATACCAACTATGGAGTAAA+TGG | - | chr5.1:75258126-75258145 | None:intergenic | 35.0% | |
| CCCAAAAGACAAAGTTAAAC+TGG | - | chr5.1:75254593-75254612 | None:intergenic | 35.0% | |
| CCCAATTAAACTCCTATCAA+TGG | - | chr5.1:75259033-75259052 | None:intergenic | 35.0% | |
| CTCAAACTAAGAGATCTGTA+TGG | + | chr5.1:75254169-75254188 | MS.gene63842:CDS | 35.0% | |
| CTTCTATTCTTCTGCTTTGA+GGG | + | chr5.1:75259760-75259779 | MS.gene63842:CDS | 35.0% | |
| GAGATCAACTCGTTTATTCA+GGG | + | chr5.1:75258926-75258945 | MS.gene63842:CDS | 35.0% | |
| GGAAACAAATGCCTAAACTT+GGG | + | chr5.1:75259483-75259502 | MS.gene63842:intron | 35.0% | |
| GTTAGTAATAGGACTCCTAA+GGG | + | chr5.1:75257769-75257788 | MS.gene63842:intron | 35.0% | |
| GTTCAATAATAGGACACTGA+TGG | + | chr5.1:75256241-75256260 | MS.gene63842:intron | 35.0% | |
| TAATTGCTGTCTGCAGTAAT+TGG | + | chr5.1:75257860-75257879 | MS.gene63842:intron | 35.0% | |
| TAATTTGAGTACGTCATCGA+CGG | - | chr5.1:75255199-75255218 | None:intergenic | 35.0% | |
| TACCACTTCATCTTTAGTCA+AGG | - | chr5.1:75259607-75259626 | None:intergenic | 35.0% | |
| TATAAAGATTTCCGTCCTCT+TGG | + | chr5.1:75256480-75256499 | MS.gene63842:intron | 35.0% | |
| TATAACAAGGCCATACAAGA+TGG | + | chr5.1:75256967-75256986 | MS.gene63842:CDS | 35.0% | |
| TATTGAGCTGAACTGAATCA+TGG | + | chr5.1:75254327-75254346 | MS.gene63842:intron | 35.0% | |
| TCAAACTCTACTGACATTTC+CGG | + | chr5.1:75254837-75254856 | MS.gene63842:CDS | 35.0% | |
| TCAGACTTTCCATATTTGCA+TGG | + | chr5.1:75257236-75257255 | MS.gene63842:intron | 35.0% | |
| TCAGCATTAGGACAAGAAAT+CGG | - | chr5.1:75256284-75256303 | None:intergenic | 35.0% | |
| TCAGTATTTCCTAAGAATGC+AGG | + | chr5.1:75258779-75258798 | MS.gene63842:CDS | 35.0% | |
| TCTCAAATTGACAACATCAC+TGG | - | chr5.1:75254477-75254496 | None:intergenic | 35.0% | |
| TGGTTGAACATTCAGGTAAA+TGG | + | chr5.1:75255243-75255262 | MS.gene63842:intron | 35.0% | |
| TGTTAGTAATAGGACTCCTA+AGG | + | chr5.1:75257768-75257787 | MS.gene63842:intron | 35.0% | |
| TTAGGACAAGAAATCGGATA+AGG | - | chr5.1:75256278-75256297 | None:intergenic | 35.0% | |
| TTCAGGGTGCAAAAATTAAC+GGG | + | chr5.1:75258942-75258961 | MS.gene63842:CDS | 35.0% | |
| TTGACGTGGAACGATATAAA+AGG | + | chr5.1:75257156-75257175 | MS.gene63842:CDS | 35.0% | |
| TTGTTATGGACAGTAACTCA+GGG | + | chr5.1:75255123-75255142 | MS.gene63842:intron | 35.0% | |
| TTTATCAAGACGTTTGCTTC+TGG | + | chr5.1:75255571-75255590 | MS.gene63842:CDS | 35.0% | |
| TTTCTTCTCAGATTCAACTG+TGG | + | chr5.1:75258904-75258923 | MS.gene63842:CDS | 35.0% | |
| ! | AGTTGGTATGACTGATTATC+TGG | + | chr5.1:75258136-75258155 | MS.gene63842:intron | 35.0% |
| ! | ATGTTTCTACGAAAACTGAG+AGG | - | chr5.1:75258853-75258872 | None:intergenic | 35.0% |
| ! | GAGTATCTATGAGCAGTTTT+AGG | - | chr5.1:75258983-75259002 | None:intergenic | 35.0% |
| ! | GCTTTTCCACAATGTTTGTT+TGG | - | chr5.1:75258817-75258836 | None:intergenic | 35.0% |
| ! | TAAAGCATCAATGACAGCAT+CGG | - | chr5.1:75258564-75258583 | None:intergenic | 35.0% |
| ! | TAGTGACTCTGCTTACATTT+TGG | + | chr5.1:75254722-75254741 | MS.gene63842:CDS | 35.0% |
| ! | TATTTTCGTTCAACTTGACG+TGG | + | chr5.1:75257142-75257161 | MS.gene63842:CDS | 35.0% |
| ! | TGTCTTTAGGTTTCTCAATC+AGG | + | chr5.1:75255492-75255511 | MS.gene63842:CDS | 35.0% |
| ! | TTTGTTATGGACAGTAACTC+AGG | + | chr5.1:75255122-75255141 | MS.gene63842:intron | 35.0% |
| ! | TTTTGCTTCCATCTTAGACT+AGG | + | chr5.1:75256368-75256387 | MS.gene63842:intron | 35.0% |
| !! | AAATAAAGGCATTCAGGGAT+TGG | + | chr5.1:75257944-75257963 | MS.gene63842:intron | 35.0% |
| !! | AATAAAGGCATTCAGGGATT+GGG | + | chr5.1:75257945-75257964 | MS.gene63842:intron | 35.0% |
| !! | AGAGGAAAATAAAGGCATTC+AGG | + | chr5.1:75257938-75257957 | MS.gene63842:intron | 35.0% |
| !! | CTGGTAAGTTTAACTTGTGT+CGG | + | chr5.1:75254958-75254977 | MS.gene63842:intron | 35.0% |
| !! | CTTATTTTCTGGATCATGCA+GGG | - | chr5.1:75258191-75258210 | None:intergenic | 35.0% |
| !! | GAGGAAAATAAAGGCATTCA+GGG | + | chr5.1:75257939-75257958 | MS.gene63842:intron | 35.0% |
| !!! | ATATAAACTTTTTGGCTCCC+TGG | - | chr5.1:75258608-75258627 | None:intergenic | 35.0% |
| !!! | ATTCACAGGAATGTCACTTT+TGG | - | chr5.1:75258309-75258328 | None:intergenic | 35.0% |
| !!! | TCTTATTTTCTGGATCATGC+AGG | - | chr5.1:75258192-75258211 | None:intergenic | 35.0% |
| AAAAGACTTCCTGGTTGAAC+AGG | - | chr5.1:75259534-75259553 | None:intergenic | 40.0% | |
| AAAATGAGAAGCCCAAAGTG+TGG | + | chr5.1:75259090-75259109 | MS.gene63842:intron | 40.0% | |
| AACATCCACACCATCTTGTA+TGG | - | chr5.1:75256980-75256999 | None:intergenic | 40.0% | |
| AACCACCCAAACAAACATTG+TGG | + | chr5.1:75258808-75258827 | MS.gene63842:CDS | 40.0% | |
| AACTAACCTATTGCTTCGGA+TGG | - | chr5.1:75255832-75255851 | None:intergenic | 40.0% | |
| AAGAAGCAAGCAGAAACCTT+AGG | - | chr5.1:75259714-75259733 | None:intergenic | 40.0% | |
| AAGTGTGGAGAGTTTACACT+AGG | + | chr5.1:75259105-75259124 | MS.gene63842:intron | 40.0% | |
| AATTGGGCCTGATACTATTG+AGG | + | chr5.1:75259046-75259065 | MS.gene63842:intron | 40.0% | |
| ACATCACCCTCAATAGTATC+AGG | - | chr5.1:75259056-75259075 | None:intergenic | 40.0% | |
| ACCAAGACTCTCGAATTTCT+TGG | + | chr5.1:75258020-75258039 | MS.gene63842:intron | 40.0% | |
| ACTCGCCGTTATCAATGAAT+TGG | - | chr5.1:75255771-75255790 | None:intergenic | 40.0% | |
| ACTTCATCTTTAGTCAAGGG+AGG | - | chr5.1:75259603-75259622 | None:intergenic | 40.0% | |
| AGGTTTGTGGTTGAACATTC+AGG | + | chr5.1:75255236-75255255 | MS.gene63842:CDS | 40.0% | |
| AGTGTAAACTCTCCACACTT+TGG | - | chr5.1:75259105-75259124 | None:intergenic | 40.0% | |
| ATCTCAAAGTATGGAGCAAG+TGG | + | chr5.1:75256916-75256935 | MS.gene63842:CDS | 40.0% | |
| ATGGAGAAATTTGTAGGGGA+TGG | - | chr5.1:75256049-75256068 | None:intergenic | 40.0% | |
| ATTGCTTCGGATGGAGTTAA+AGG | - | chr5.1:75255823-75255842 | None:intergenic | 40.0% | |
| ATTGGGCCTGATACTATTGA+GGG | + | chr5.1:75259047-75259066 | MS.gene63842:intron | 40.0% | |
| CACAGAAAAATAGCCACTTG+TGG | - | chr5.1:75254907-75254926 | None:intergenic | 40.0% | |
| CACCTTTGTCGTATGTTTAG+AGG | - | chr5.1:75256570-75256589 | None:intergenic | 40.0% | |
| CAGCAATGAGTTTGTATCTC+AGG | + | chr5.1:75258874-75258893 | MS.gene63842:CDS | 40.0% | |
| CAGTAGTACAGAGCTATTAG+TGG | - | chr5.1:75258636-75258655 | None:intergenic | 40.0% | |
| CCAAGACTCTCGAATTTCTT+GGG | + | chr5.1:75258021-75258040 | MS.gene63842:intron | 40.0% | |
| CCATCAACCAATCAGACTTA+TGG | + | chr5.1:75255526-75255545 | MS.gene63842:CDS | 40.0% | |
| CCTGTTCAATTGTCAAAGGA+CGG | + | chr5.1:75257009-75257028 | MS.gene63842:CDS | 40.0% | |
| CGATGACGTACTCAAATTAG+TGG | + | chr5.1:75255200-75255219 | MS.gene63842:CDS | 40.0% | |
| CGTCCTTTGACAATTGAACA+GGG | - | chr5.1:75257011-75257030 | None:intergenic | 40.0% | |
| CTCTGTACTACTGAAGTTCA+AGG | + | chr5.1:75258643-75258662 | MS.gene63842:CDS | 40.0% | |
| CTGGTAGACAAGCTCATATT+TGG | - | chr5.1:75258675-75258694 | None:intergenic | 40.0% | |
| CTGTTCAATTGTCAAAGGAC+GGG | + | chr5.1:75257010-75257029 | MS.gene63842:CDS | 40.0% | |
| CTTCATCTTTAGTCAAGGGA+GGG | - | chr5.1:75259602-75259621 | None:intergenic | 40.0% | |
| GACTTTCCATATTTGCATGG+TGG | + | chr5.1:75257239-75257258 | MS.gene63842:intron | 40.0% | |
| GAGTTTGAAAGGTTGAGATC+TGG | - | chr5.1:75254825-75254844 | None:intergenic | 40.0% | |
| GATGGAAGCAAAAATGCAGA+AGG | - | chr5.1:75256361-75256380 | None:intergenic | 40.0% | |
| GATTGGGATAAAGGATAGGT+AGG | + | chr5.1:75257961-75257980 | MS.gene63842:intron | 40.0% | |
| GCGGCAAGTCATTTACAAAA+TGG | - | chr5.1:75255871-75255890 | None:intergenic | 40.0% | |
| GCTTCTATTCTTCTGCTTTG+AGG | + | chr5.1:75259759-75259778 | MS.gene63842:CDS | 40.0% | |
| GGAGATCAACTCGTTTATTC+AGG | + | chr5.1:75258925-75258944 | MS.gene63842:CDS | 40.0% | |
| GTGTAAACTCTCCACACTTT+GGG | - | chr5.1:75259104-75259123 | None:intergenic | 40.0% | |
| GTTAAACTTACCAGTGACAC+TGG | - | chr5.1:75254952-75254971 | None:intergenic | 40.0% | |
| GTTACAAAGCCTGCATTCTT+AGG | - | chr5.1:75258791-75258810 | None:intergenic | 40.0% | |
| TAAGCAGAGTCACTAGAATC+AGG | - | chr5.1:75254717-75254736 | None:intergenic | 40.0% | |
| TATATTTCATCACCTGAGGC+TGG | + | chr5.1:75255421-75255440 | MS.gene63842:CDS | 40.0% | |
| TCCCTTGACTAAAGATGAAG+TGG | + | chr5.1:75259602-75259621 | MS.gene63842:CDS | 40.0% | |
| TCGAGAGATAACAGACTTGA+TGG | - | chr5.1:75259428-75259447 | None:intergenic | 40.0% | |
| TCTACAACCACATACCTCTT+TGG | + | chr5.1:75255642-75255661 | MS.gene63842:CDS | 40.0% | |
| TGAATGTTCAACCACAAACC+TGG | - | chr5.1:75255237-75255256 | None:intergenic | 40.0% | |
| TGGAGAAATTTGTAGGGGAT+GGG | - | chr5.1:75256048-75256067 | None:intergenic | 40.0% | |
| TTAACTCCATCCGAAGCAAT+AGG | + | chr5.1:75255823-75255842 | MS.gene63842:CDS | 40.0% | |
| TTCCACAATGTTTGTTTGGG+TGG | - | chr5.1:75258813-75258832 | None:intergenic | 40.0% | |
| TTGAAAGGTTGAGATCTGGA+AGG | - | chr5.1:75254821-75254840 | None:intergenic | 40.0% | |
| TTGTTACGACACTTGTGAGT+AGG | + | chr5.1:75258249-75258268 | MS.gene63842:intron | 40.0% | |
| TTGTTCCCAAGGGATACATA+TGG | + | chr5.1:75255599-75255618 | MS.gene63842:CDS | 40.0% | |
| TTTGGTTGAAGTAACTCAGC+AGG | - | chr5.1:75258362-75258381 | None:intergenic | 40.0% | |
| ! | ATCTCACATGGTGGTTTTTC+GGG | + | chr5.1:75254684-75254703 | MS.gene63842:CDS | 40.0% |
| ! | CATCTCACATGGTGGTTTTT+CGG | + | chr5.1:75254683-75254702 | MS.gene63842:CDS | 40.0% |
| ! | CCATAAGTCTGATTGGTTGA+TGG | - | chr5.1:75255529-75255548 | None:intergenic | 40.0% |
| ! | CTCTCACACACCTTTTTGTT+GGG | - | chr5.1:75259192-75259211 | None:intergenic | 40.0% |
| ! | GCACGATTTCCATCATTTTG+TGG | + | chr5.1:75256829-75256848 | MS.gene63842:intron | 40.0% |
| ! | GCAGGCTTTTCAAAGTAACA+AGG | - | chr5.1:75258167-75258186 | None:intergenic | 40.0% |
| ! | GTACAGAGCTATTAGTGGAT+TGG | - | chr5.1:75258631-75258650 | None:intergenic | 40.0% |
| ! | GTGTGCTATTACCCAAGTTT+AGG | - | chr5.1:75259497-75259516 | None:intergenic | 40.0% |
| ! | TAACTCAGGGAGTATACAGT+AGG | + | chr5.1:75255136-75255155 | MS.gene63842:CDS | 40.0% |
| ! | TCTGGAATTCTTGTTCCCAA+GGG | + | chr5.1:75255589-75255608 | MS.gene63842:CDS | 40.0% |
| ! | TTCTGTGGATTACAACTTCG+AGG | + | chr5.1:75254920-75254939 | MS.gene63842:CDS | 40.0% |
| !! | AATTGGAGGTATTCAGCAAG+AGG | - | chr5.1:75255754-75255773 | None:intergenic | 40.0% |
| !! | GGCCTTGTTATATGCTAAGT+TGG | - | chr5.1:75256959-75256978 | None:intergenic | 40.0% |
| !! | TATGCTAAGTTGGTACAAGC+TGG | - | chr5.1:75256949-75256968 | None:intergenic | 40.0% |
| !! | TTCTGGAATTCTTGTTCCCA+AGG | + | chr5.1:75255588-75255607 | MS.gene63842:CDS | 40.0% |
| !!! | CACAAGTGGCTATTTTTCTG+TGG | + | chr5.1:75254905-75254924 | MS.gene63842:CDS | 40.0% |
| !!! | GGCAGTAAGTTTTTTCACTG+AGG | + | chr5.1:75259255-75259274 | MS.gene63842:intron | 40.0% |
| !!! | GTTTTTTCACTGAGGAGCTT+TGG | + | chr5.1:75259263-75259282 | MS.gene63842:intron | 40.0% |
| AACCACAAACCTGGTGTTTG+TGG | - | chr5.1:75255228-75255247 | None:intergenic | 45.0% | |
| AAGCTCTCGAATTCATGGAG+GGG | + | chr5.1:75257992-75258011 | MS.gene63842:intron | 45.0% | |
| ACAGGCCATATGTATCCCTT+GGG | - | chr5.1:75255607-75255626 | None:intergenic | 45.0% | |
| ACCACAAACCTGGTGTTTGT+GGG | - | chr5.1:75255227-75255246 | None:intergenic | 45.0% | |
| ACTATGCGGCCACAAAATGA+TGG | - | chr5.1:75256841-75256860 | None:intergenic | 45.0% | |
| ACTTACCAGTGACACTGGAT+AGG | - | chr5.1:75254947-75254966 | None:intergenic | 45.0% | |
| AGACCAAGCTCTCGAATTCA+TGG | + | chr5.1:75257987-75258006 | MS.gene63842:intron | 45.0% | |
| AGCAAAAATGCAGAAGGTCG+TGG | - | chr5.1:75256355-75256374 | None:intergenic | 45.0% | |
| AGCCTATCTTGCAGAAAAGC+AGG | + | chr5.1:75258526-75258545 | MS.gene63842:CDS | 45.0% | |
| AGCTACAAACACAGCAAGAC+TGG | - | chr5.1:75259742-75259761 | None:intergenic | 45.0% | |
| AGGCGTCTTGATCATTGTTG+AGG | + | chr5.1:75257665-75257684 | MS.gene63842:CDS | 45.0% | |
| AGGGCCATTTACTCCATAGT+TGG | + | chr5.1:75258119-75258138 | MS.gene63842:intron | 45.0% | |
| AGTCAACGACGAACACTATG+CGG | - | chr5.1:75256855-75256874 | None:intergenic | 45.0% | |
| AGTGTCCCTGAGATCAAATC+TGG | + | chr5.1:75257111-75257130 | MS.gene63842:CDS | 45.0% | |
| ATCACACCATAGAGCAGCAT+TGG | - | chr5.1:75254766-75254785 | None:intergenic | 45.0% | |
| ATCAGTCAGCACACCATCAA+CGG | - | chr5.1:75255797-75255816 | None:intergenic | 45.0% | |
| ATTGAGGCTGCAGGGAAAAT+AGG | - | chr5.1:75257531-75257550 | None:intergenic | 45.0% | |
| ATTTGTAGGGGATGGGATCA+TGG | - | chr5.1:75256041-75256060 | None:intergenic | 45.0% | |
| CAAGCTCTCGAATTCATGGA+GGG | + | chr5.1:75257991-75258010 | MS.gene63842:intron | 45.0% | |
| CAGGGATTGGGATAAAGGAT+AGG | + | chr5.1:75257957-75257976 | MS.gene63842:intron | 45.0% | |
| CCCAAGAAATTCGAGAGTCT+TGG | - | chr5.1:75258024-75258043 | None:intergenic | 45.0% | |
| CCGTCCTTTGACAATTGAAC+AGG | - | chr5.1:75257012-75257031 | None:intergenic | 45.0% | |
| CGCCGTTATCAATGAATTGG+AGG | - | chr5.1:75255768-75255787 | None:intergenic | 45.0% | |
| CTGCCCTGTTCAATTGTCAA+AGG | + | chr5.1:75257005-75257024 | MS.gene63842:CDS | 45.0% | |
| GCAAAAATGCAGAAGGTCGT+GGG | - | chr5.1:75256354-75256373 | None:intergenic | 45.0% | |
| GCAGATTGCTTTGCTCACAT+AGG | + | chr5.1:75256718-75256737 | MS.gene63842:intron | 45.0% | |
| GCATTCAGGGATTGGGATAA+AGG | + | chr5.1:75257952-75257971 | MS.gene63842:intron | 45.0% | |
| GCCTATCTTGCAGAAAAGCA+GGG | + | chr5.1:75258527-75258546 | MS.gene63842:CDS | 45.0% | |
| GGCAACAATGCTACAAGAAG+AGG | + | chr5.1:75256739-75256758 | MS.gene63842:CDS | 45.0% | |
| GGCATGAAAAACCAAGAGGA+CGG | - | chr5.1:75256494-75256513 | None:intergenic | 45.0% | |
| GGGTTACCACCATGCAAATA+TGG | - | chr5.1:75257248-75257267 | None:intergenic | 45.0% | |
| GGTTGAACAGGTTGCATGTA+GGG | - | chr5.1:75259522-75259541 | None:intergenic | 45.0% | |
| GTTAATGGTGTACCCACAAG+TGG | + | chr5.1:75254891-75254910 | MS.gene63842:CDS | 45.0% | |
| TACAGGCCATATGTATCCCT+TGG | - | chr5.1:75255608-75255627 | None:intergenic | 45.0% | |
| TACATGCAACCTGTTCAACC+AGG | + | chr5.1:75259522-75259541 | MS.gene63842:CDS | 45.0% | |
| TACTATTGAGGGTGATGTGC+TGG | + | chr5.1:75259058-75259077 | MS.gene63842:intron | 45.0% | |
| TATATCCTCAGCAGCAGCAT+TGG | - | chr5.1:75258723-75258742 | None:intergenic | 45.0% | |
| TCACACCATAGAGCAGCATT+GGG | - | chr5.1:75254765-75254784 | None:intergenic | 45.0% | |
| TCTGTATGGAACACACTCAC+AGG | + | chr5.1:75254183-75254202 | MS.gene63842:CDS | 45.0% | |
| TGAGAAAGGGGCCAATATTG+AGG | - | chr5.1:75257547-75257566 | None:intergenic | 45.0% | |
| TGGTTGAACAGGTTGCATGT+AGG | - | chr5.1:75259523-75259542 | None:intergenic | 45.0% | |
| TTGAGGCTGCAGGGAAAATA+GGG | - | chr5.1:75257530-75257549 | None:intergenic | 45.0% | |
| TTTCCCTGCAGCCTCAATAT+TGG | + | chr5.1:75257533-75257552 | MS.gene63842:intron | 45.0% | |
| TTTGTAGGGGATGGGATCAT+GGG | - | chr5.1:75256040-75256059 | None:intergenic | 45.0% | |
| ! | CAAAAAGGTGTGTGAGAGGA+AGG | + | chr5.1:75259194-75259213 | MS.gene63842:intron | 45.0% |
| ! | CCAACAAAAAGGTGTGTGAG+AGG | + | chr5.1:75259190-75259209 | MS.gene63842:intron | 45.0% |
| ! | CCTCTCACACACCTTTTTGT+TGG | - | chr5.1:75259193-75259212 | None:intergenic | 45.0% |
| ! | GAAGCTAGTTTGAGCAACTG+TGG | - | chr5.1:75257076-75257095 | None:intergenic | 45.0% |
| ! | TACCAGATTGACGAGAGTGT+CGG | + | chr5.1:75258689-75258708 | MS.gene63842:CDS | 45.0% |
| ! | TCTGAGACCAAAGAGGTATG+TGG | - | chr5.1:75255652-75255671 | None:intergenic | 45.0% |
| !! | AGAAGGTGCCTAGTCTAAGA+TGG | - | chr5.1:75256379-75256398 | None:intergenic | 45.0% |
| !! | ATTTTAGCAACCGGAGGCAA+AGG | - | chr5.1:75259636-75259655 | None:intergenic | 45.0% |
| !! | GTCCCATCGTTCTTAGCTTT+TGG | - | chr5.1:75257591-75257610 | None:intergenic | 45.0% |
| !! | TCCCTGCTTTTCTGCAAGAT+AGG | - | chr5.1:75258531-75258550 | None:intergenic | 45.0% |
| !!! | GCTGGAGCTATTTTAGCAAC+CGG | - | chr5.1:75259645-75259664 | None:intergenic | 45.0% |
| !!! | TTTTTCAGGAAGTCCACCAC+TGG | + | chr5.1:75254659-75254678 | MS.gene63842:intron | 45.0% |
| !!! | ATTTATTTTATTTTTTTTGA+AGG | - | chr5.1:75259346-75259365 | None:intergenic | 5.0% |
| AACCTTAGGCTGTGCGTTTC+CGG | - | chr5.1:75259700-75259719 | None:intergenic | 50.0% | |
| ACTAGGCACCTTCTCTAGAC+AGG | + | chr5.1:75256385-75256404 | MS.gene63842:intron | 50.0% | |
| ATCCCCTACCTGTCTAGAGA+AGG | - | chr5.1:75256396-75256415 | None:intergenic | 50.0% | |
| CAAGGCCATACAAGATGGTG+TGG | + | chr5.1:75256972-75256991 | MS.gene63842:CDS | 50.0% | |
| CACCTTCTCTAGACAGGTAG+GGG | + | chr5.1:75256391-75256410 | MS.gene63842:intron | 50.0% | |
| CACGGCCAGATTTGATCTCA+GGG | - | chr5.1:75257119-75257138 | None:intergenic | 50.0% | |
| CCAAGCTCTCGAATTCATGG+AGG | + | chr5.1:75257990-75258009 | MS.gene63842:intron | 50.0% | |
| CCACAAACCTGGTGTTTGTG+GGG | - | chr5.1:75255226-75255245 | None:intergenic | 50.0% | |
| CCTCCATGAATTCGAGAGCT+TGG | - | chr5.1:75257993-75258012 | None:intergenic | 50.0% | |
| CTTCTCAGAAAACCAGCCTC+AGG | - | chr5.1:75255436-75255455 | None:intergenic | 50.0% | |
| GCACCTTCTCTAGACAGGTA+GGG | + | chr5.1:75256390-75256409 | MS.gene63842:intron | 50.0% | |
| GGTACTTGTTCTTGCCATGC+TGG | + | chr5.1:75256193-75256212 | MS.gene63842:intron | 50.0% | |
| GTGTGTGCACCATCAGCATT+AGG | - | chr5.1:75256296-75256315 | None:intergenic | 50.0% | |
| TACGTCATTGCCTCCAGCTA+TGG | + | chr5.1:75259569-75259588 | MS.gene63842:CDS | 50.0% | |
| TATTGAGGGTGATGTGCTGG+TGG | + | chr5.1:75259061-75259080 | MS.gene63842:intron | 50.0% | |
| TCTTTAGTCAAGGGAGGGAG+TGG | - | chr5.1:75259597-75259616 | None:intergenic | 50.0% | |
| TGAACAGGTTGCATGTAGGG+AGG | - | chr5.1:75259519-75259538 | None:intergenic | 50.0% | |
| TGTGAGAGGAAGGAGTAGGT+AGG | + | chr5.1:75259204-75259223 | MS.gene63842:intron | 50.0% | |
| ! | ATTGAGGGTGATGTGCTGGT+GGG | + | chr5.1:75259062-75259081 | MS.gene63842:intron | 50.0% |
| ! | TCACTGAGGAGCTTTGGTCT+GGG | + | chr5.1:75259269-75259288 | MS.gene63842:intron | 50.0% |
| ! | TTCACTGAGGAGCTTTGGTC+TGG | + | chr5.1:75259268-75259287 | MS.gene63842:intron | 50.0% |
| !! | AGTTTGTAGGAGCACCAGCA+TGG | - | chr5.1:75256210-75256229 | None:intergenic | 50.0% |
| !! | ATTGGGTGTGCTGGTTTGTG+CGG | - | chr5.1:75254748-75254767 | None:intergenic | 50.0% |
| !!! | GGAGCTATTTTAGCAACCGG+AGG | - | chr5.1:75259642-75259661 | None:intergenic | 50.0% |
| AACGGCGAGTTCACCGTTGA+TGG | + | chr5.1:75255781-75255800 | MS.gene63842:CDS | 55.0% | |
| ACCTTAGGCTGTGCGTTTCC+GGG | - | chr5.1:75259699-75259718 | None:intergenic | 55.0% | |
| AGTAGGTCACCCCTTCTCGA+TGG | + | chr5.1:75255153-75255172 | MS.gene63842:CDS | 55.0% | |
| CACCGACACTCTCGTCAATC+TGG | - | chr5.1:75258694-75258713 | None:intergenic | 55.0% | |
| CCACCACTGGTCATCTCACA+TGG | + | chr5.1:75254672-75254691 | MS.gene63842:CDS | 55.0% | |
| CCACCATGTGAGATGACCAG+TGG | - | chr5.1:75254678-75254697 | None:intergenic | 55.0% | |
| CCACGGCCAGATTTGATCTC+AGG | - | chr5.1:75257120-75257139 | None:intergenic | 55.0% | |
| CCACTGGTCATCTCACATGG+TGG | + | chr5.1:75254675-75254694 | MS.gene63842:CDS | 55.0% | |
| CCATGTGAGATGACCAGTGG+TGG | - | chr5.1:75254675-75254694 | None:intergenic | 55.0% | |
| CCCCACAAACACCAGGTTTG+TGG | + | chr5.1:75255223-75255242 | MS.gene63842:CDS | 55.0% | |
| CCTGAGATCAAATCTGGCCG+TGG | + | chr5.1:75257117-75257136 | MS.gene63842:CDS | 55.0% | |
| CTCTAGACAGGTAGGGGATC+TGG | + | chr5.1:75256397-75256416 | MS.gene63842:intron | 55.0% | |
| GAGGACCTATCCAGTGTCAC+TGG | + | chr5.1:75254939-75254958 | MS.gene63842:CDS | 55.0% | |
| GCACACCCAATGCTGCTCTA+TGG | + | chr5.1:75254757-75254776 | MS.gene63842:CDS | 55.0% | |
| GGCACCTTCTCTAGACAGGT+AGG | + | chr5.1:75256389-75256408 | MS.gene63842:intron | 55.0% | |
| GGGCCAATATTGAGGCTGCA+GGG | - | chr5.1:75257539-75257558 | None:intergenic | 55.0% | |
| GGTCTCAGACGCGCATAAAG+CGG | + | chr5.1:75255663-75255682 | MS.gene63842:CDS | 55.0% | |
| GGTGTGTGAGAGGAAGGAGT+AGG | + | chr5.1:75259200-75259219 | MS.gene63842:intron | 55.0% | |
| GTCTCAGACGCGCATAAAGC+GGG | + | chr5.1:75255664-75255683 | MS.gene63842:CDS | 55.0% | |
| TCTCAGACGCGCATAAAGCG+GGG | + | chr5.1:75255665-75255684 | MS.gene63842:CDS | 55.0% | |
| TGCAGAAGGTCGTGGGTGTT+TGG | - | chr5.1:75256347-75256366 | None:intergenic | 55.0% | |
| TGCTACCAATGCTGCTGCTG+AGG | + | chr5.1:75258715-75258734 | MS.gene63842:CDS | 55.0% | |
| TTAGCAACCGGAGGCAAAGG+TGG | - | chr5.1:75259633-75259652 | None:intergenic | 55.0% | |
| TTAGTGGCCCCACAAACACC+AGG | + | chr5.1:75255216-75255235 | MS.gene63842:CDS | 55.0% | |
| TTCTGGATCATGCAGGGTGC+AGG | - | chr5.1:75258185-75258204 | None:intergenic | 55.0% | |
| ! | ATGCGCGTCTGAGACCAAAG+AGG | - | chr5.1:75255659-75255678 | None:intergenic | 55.0% |
| ! | TAGAGCAGCATTGGGTGTGC+TGG | - | chr5.1:75254757-75254776 | None:intergenic | 55.0% |
| !! | GGGAAATGTGAGTGCTGAGC+TGG | + | chr5.1:75259148-75259167 | MS.gene63842:intron | 55.0% |
| ACCCGGAAACGCACAGCCTA+AGG | + | chr5.1:75259695-75259714 | MS.gene63842:CDS | 60.0% | |
| GGGGCCAATATTGAGGCTGC+AGG | - | chr5.1:75257540-75257559 | None:intergenic | 60.0% | |
| GGTAGAGCCACCTTTGCCTC+CGG | + | chr5.1:75259623-75259642 | MS.gene63842:CDS | 60.0% | |
| TAGGCTGTGCGTTTCCGGGT+GGG | - | chr5.1:75259695-75259714 | None:intergenic | 60.0% | |
| TTAGGCTGTGCGTTTCCGGG+TGG | - | chr5.1:75259696-75259715 | None:intergenic | 60.0% | |
| ! | AGTGAAACGGAGAGAGCGCG+TGG | - | chr5.1:75254117-75254136 | None:intergenic | 60.0% |
| AGACGCGCATAAAGCGGGGC+TGG | + | chr5.1:75255669-75255688 | MS.gene63842:CDS | 65.0% | |
| AGGCTGTGCGTTTCCGGGTG+GGG | - | chr5.1:75259694-75259713 | None:intergenic | 65.0% | |
| CCAGCTGTTAGCCCTGCTGC+CGG | + | chr5.1:75259660-75259679 | MS.gene63842:CDS | 65.0% | |
| GGAGGGAGTGGAGCCATAGC+TGG | - | chr5.1:75259585-75259604 | None:intergenic | 65.0% | |
| GGGAGTGGAGCCATAGCTGG+AGG | - | chr5.1:75259582-75259601 | None:intergenic | 65.0% | |
| TGCGTTTCCGGGTGGGGACT+TGG | - | chr5.1:75259688-75259707 | None:intergenic | 65.0% | |
| ! | GGGACTTGGTTCCGGCAGCA+GGG | - | chr5.1:75259674-75259693 | None:intergenic | 65.0% |
| ! | TCCGGGTGGGGACTTGGTTC+CGG | - | chr5.1:75259682-75259701 | None:intergenic | 65.0% |
| CCGGCAGCAGGGCTAACAGC+TGG | - | chr5.1:75259663-75259682 | None:intergenic | 70.0% | |
| GCCGGAACCAAGTCCCCACC+CGG | + | chr5.1:75259678-75259697 | MS.gene63842:CDS | 70.0% | |
| ! | GGGGACTTGGTTCCGGCAGC+AGG | - | chr5.1:75259675-75259694 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 75254105 | 75259779 | 75254105 | ID=MS.gene63842 |
| chr5.1 | mRNA | 75254105 | 75259779 | 75254105 | ID=MS.gene63842.t1;Parent=MS.gene63842 |
| chr5.1 | exon | 75254105 | 75254204 | 75254105 | ID=MS.gene63842.t1.exon1;Parent=MS.gene63842.t1 |
| chr5.1 | CDS | 75254105 | 75254204 | 75254105 | ID=cds.MS.gene63842.t1;Parent=MS.gene63842.t1 |
| chr5.1 | exon | 75254667 | 75254960 | 75254667 | ID=MS.gene63842.t1.exon2;Parent=MS.gene63842.t1 |
| chr5.1 | CDS | 75254667 | 75254960 | 75254667 | ID=cds.MS.gene63842.t1;Parent=MS.gene63842.t1 |
| chr5.1 | exon | 75255136 | 75255257 | 75255136 | ID=MS.gene63842.t1.exon3;Parent=MS.gene63842.t1 |
| chr5.1 | CDS | 75255136 | 75255257 | 75255136 | ID=cds.MS.gene63842.t1;Parent=MS.gene63842.t1 |
| chr5.1 | exon | 75255343 | 75255844 | 75255343 | ID=MS.gene63842.t1.exon4;Parent=MS.gene63842.t1 |
| chr5.1 | CDS | 75255343 | 75255844 | 75255343 | ID=cds.MS.gene63842.t1;Parent=MS.gene63842.t1 |
| chr5.1 | exon | 75256722 | 75256760 | 75256722 | ID=MS.gene63842.t1.exon5;Parent=MS.gene63842.t1 |
| chr5.1 | CDS | 75256722 | 75256760 | 75256722 | ID=cds.MS.gene63842.t1;Parent=MS.gene63842.t1 |
| chr5.1 | exon | 75256902 | 75257186 | 75256902 | ID=MS.gene63842.t1.exon6;Parent=MS.gene63842.t1 |
| chr5.1 | CDS | 75256902 | 75257186 | 75256902 | ID=cds.MS.gene63842.t1;Parent=MS.gene63842.t1 |
| chr5.1 | exon | 75257544 | 75257686 | 75257544 | ID=MS.gene63842.t1.exon7;Parent=MS.gene63842.t1 |
| chr5.1 | CDS | 75257544 | 75257686 | 75257544 | ID=cds.MS.gene63842.t1;Parent=MS.gene63842.t1 |
| chr5.1 | exon | 75258521 | 75259004 | 75258521 | ID=MS.gene63842.t1.exon8;Parent=MS.gene63842.t1 |
| chr5.1 | CDS | 75258521 | 75259004 | 75258521 | ID=cds.MS.gene63842.t1;Parent=MS.gene63842.t1 |
| chr5.1 | exon | 75259484 | 75259779 | 75259484 | ID=MS.gene63842.t1.exon9;Parent=MS.gene63842.t1 |
| chr5.1 | CDS | 75259484 | 75259779 | 75259484 | ID=cds.MS.gene63842.t1;Parent=MS.gene63842.t1 |
| Gene Sequence |
| Protein sequence |
