AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021407

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021407.t1 MTR_1g007150 95.646 689 7 4 1 671 1 684 0.0 1361
MS.gene021407.t1 MTR_3g110240 80.371 647 111 2 39 671 37 681 0.0 1094
MS.gene021407.t1 MTR_7g006030 80.314 574 103 2 103 670 29 598 0.0 997
MS.gene021407.t1 MTR_1g116210 78.735 569 116 2 103 670 111 675 0.0 974
MS.gene021407.t1 MTR_8g014050 77.778 576 117 3 103 671 120 691 0.0 939
MS.gene021407.t1 MTR_7g085540 75.567 573 131 2 103 670 139 707 0.0 934
MS.gene021407.t1 MTR_4g126010 38.828 273 156 5 111 380 9 273 5.85e-59 205
MS.gene021407.t1 MTR_2g099670 38.828 273 156 5 111 380 9 273 1.13e-58 205
MS.gene021407.t1 MTR_2g039930 38.462 273 157 5 111 380 9 273 1.66e-57 202
MS.gene021407.t1 MTR_1g075870 38.710 279 158 6 105 380 6 274 1.63e-56 195
MS.gene021407.t1 MTR_8g018310 37.828 267 154 6 111 374 9 266 4.83e-56 198
MS.gene021407.t1 MTR_7g097160 38.095 273 158 5 111 380 9 273 5.12e-56 197
MS.gene021407.t1 MTR_1g075870 38.710 279 158 6 105 380 6 274 9.16e-56 197
MS.gene021407.t1 MTR_1g042280 37.634 279 161 6 105 380 6 274 1.00e-55 197
MS.gene021407.t1 MTR_8g018310 37.828 267 154 6 111 374 9 266 1.10e-55 195
MS.gene021407.t1 MTR_1g069720 37.276 279 162 6 105 380 5 273 2.26e-54 193
MS.gene021407.t1 MTR_6g087070 37.363 273 160 5 111 380 9 273 7.89e-54 191
MS.gene021407.t1 MTR_1g004990 36.918 279 163 6 105 380 5 273 1.67e-53 190
MS.gene021407.t1 MTR_8g102930 37.276 279 162 6 105 380 5 273 2.03e-53 189
MS.gene021407.t1 MTR_3g110180 36.201 279 165 6 105 380 5 273 1.90e-52 187
MS.gene021407.t1 MTR_0492s0030 37.102 283 163 6 103 380 3 275 2.50e-52 185
MS.gene021407.t1 MTR_0543s0020 37.102 283 163 6 103 380 3 275 2.50e-52 185
MS.gene021407.t1 MTR_3g110180 36.201 279 164 7 105 380 5 272 7.24e-51 182
MS.gene021407.t1 MTR_1g042280 39.381 226 131 3 158 380 20 242 5.35e-50 177
MS.gene021407.t1 MTR_2g099670 39.437 213 123 3 171 380 12 221 2.58e-47 172
MS.gene021407.t1 MTR_1g075870 39.269 219 127 3 165 380 2 217 7.99e-47 167
MS.gene021407.t1 MTR_2g039930 38.974 195 113 3 189 380 1 192 8.70e-41 154
MS.gene021407.t1 MTR_1g116205 83.871 62 9 1 103 163 111 172 3.57e-28 111
MS.gene021407.t1 MTR_7g097160 41.985 131 72 2 253 380 25 154 1.76e-26 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021407.t1 AT2G25760 75.072 690 133 9 3 671 2 673 0.0 1070
MS.gene021407.t1 AT2G25760 74.459 693 135 10 3 671 2 676 0.0 1060
MS.gene021407.t1 AT3G13670 76.087 598 127 3 90 671 106 703 0.0 983
MS.gene021407.t1 AT3G03940 66.141 697 198 8 6 670 10 700 0.0 947
MS.gene021407.t1 AT5G18190 74.520 573 137 2 103 670 122 690 0.0 930
MS.gene021407.t1 AT5G18190 74.520 573 137 2 103 670 122 690 0.0 930
MS.gene021407.t1 AT3G03930 71.250 240 69 0 431 670 48 287 1.67e-123 369
MS.gene021407.t1 AT2G19470 38.828 273 156 5 111 380 9 273 3.25e-58 203
MS.gene021407.t1 AT4G26100 38.095 273 158 5 111 380 9 273 8.03e-58 202
MS.gene021407.t1 AT3G23340 38.710 279 158 6 105 380 5 273 9.04e-58 202
MS.gene021407.t1 AT5G57015 38.095 273 158 5 111 380 9 273 9.28e-58 202
MS.gene021407.t1 AT4G14340 38.710 279 158 6 105 380 11 279 6.79e-57 197
MS.gene021407.t1 AT1G03930 37.993 279 160 6 105 380 5 273 9.50e-57 200
MS.gene021407.t1 AT4G14340 38.710 279 158 6 105 380 11 279 1.21e-56 199
MS.gene021407.t1 AT1G72710 38.462 273 156 6 111 380 9 272 6.60e-56 197
MS.gene021407.t1 AT5G44100 36.918 279 163 6 105 380 5 273 1.10e-55 197
MS.gene021407.t1 AT5G44100 36.918 279 163 6 105 380 5 273 1.10e-55 197
MS.gene021407.t1 AT4G28540 37.276 279 162 6 105 380 9 277 1.99e-55 196
MS.gene021407.t1 AT5G43320 37.276 279 162 6 105 380 5 273 5.90e-54 192
MS.gene021407.t1 AT4G28880 37.276 279 162 6 105 380 5 273 7.32e-54 191
MS.gene021407.t1 AT4G28880 37.276 279 162 6 105 380 5 273 7.32e-54 191
MS.gene021407.t1 AT4G28880 37.276 279 162 6 105 380 5 273 7.32e-54 191
MS.gene021407.t1 AT4G28880 37.276 279 162 6 105 380 5 273 7.32e-54 191
MS.gene021407.t1 AT4G28860 37.276 279 162 6 105 380 5 273 1.60e-53 188
MS.gene021407.t1 AT5G43320 37.276 279 162 6 105 380 5 273 2.22e-53 188
MS.gene021407.t1 AT5G43320 37.276 279 162 6 105 380 5 273 2.22e-53 188
MS.gene021407.t1 AT4G28860 37.276 279 162 6 105 380 5 273 2.76e-53 189
MS.gene021407.t1 AT1G04440 36.559 279 164 6 105 380 5 273 6.96e-53 189
MS.gene021407.t1 AT3G23340 38.314 261 150 5 123 380 7 259 3.21e-51 184
MS.gene021407.t1 AT4G08800 33.333 273 139 6 111 380 9 241 8.38e-42 154

Find 173 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATATATTTGGCATAATT+TGG 0.158062 1.4:+12098049 None:intergenic
CTGAGCACCGTCAGTGTTTA+TGG 0.167427 1.4:+12097985 None:intergenic
CCCATTCTGACTTTCTTCTT+TGG 0.171287 1.4:+12097808 None:intergenic
CTCACGTGCCGGAACAAATT+AGG 0.172612 1.4:-12100853 MS.gene021407:CDS
ATATTCTTGGCCCTAGTTTA+TGG 0.174994 1.4:-12099388 MS.gene021407:CDS
TAACCTTTGGGCACTGATTA+TGG 0.191586 1.4:-12097555 MS.gene021407:CDS
ATCGAAAAGTGATATATATT+TGG 0.208565 1.4:+12098039 None:intergenic
AGAATGCATCTTCTCTAATA+TGG 0.254263 1.4:+12099185 None:intergenic
TGCTGTTAAGCTTATTTATC+AGG 0.256618 1.4:-12097881 MS.gene021407:intron
ACCAGTAAAGGGTGTAATTA+TGG 0.259169 1.4:-12099687 MS.gene021407:CDS
TTCTGATAAGCAAGAGATTA+TGG 0.259548 1.4:-12100828 MS.gene021407:CDS
TAGGTTGTTGTTCTAACCTT+TGG 0.265781 1.4:-12097568 MS.gene021407:CDS
TCCATAATTACACCCTTTAC+TGG 0.271957 1.4:+12099686 None:intergenic
TCTTGTTTGCAAGAAGAAAA+TGG 0.283561 1.4:-12098161 MS.gene021407:CDS
GCCCTAGTTTATGGGATGTT+TGG 0.283968 1.4:-12099379 MS.gene021407:CDS
GAAGAAAACCTTTGCTTCAT+AGG 0.289095 1.4:+12097742 None:intergenic
TTGTTTGTATGTAGTGTATT+AGG 0.289760 1.4:-12099570 MS.gene021407:intron
TCGGGTTTAGCGATCGGGTT+CGG 0.292385 1.4:+12101004 None:intergenic
ATGGGTCTAATGTCTGGATT+TGG 0.294234 1.4:+12098004 None:intergenic
CTACCTCGTGTAGCAGGTTC+GGG 0.297016 1.4:+12100986 None:intergenic
TATTCTTGGCCCTAGTTTAT+GGG 0.314228 1.4:-12099387 MS.gene021407:CDS
CGGGTTTAGCGATCGGGTTC+GGG 0.318336 1.4:+12101005 None:intergenic
TCACGTGCCGGAACAAATTA+GGG 0.325179 1.4:-12100852 MS.gene021407:CDS
TCTACCTCGTGTAGCAGGTT+CGG 0.330630 1.4:+12100985 None:intergenic
TGAGCACCGTCAGTGTTTAT+GGG 0.331178 1.4:+12097986 None:intergenic
AAGCTAGGGAAAGGAGGTTT+TGG 0.342457 1.4:-12100554 MS.gene021407:CDS
TTTCTGGTCGATCTTGGTTT+AGG 0.344239 1.4:-12098680 MS.gene021407:intron
ATCAACGTCCAGATGTATTT+AGG 0.344411 1.4:-12098503 MS.gene021407:intron
TATAAGATTGCTGCAAGTAT+TGG 0.346054 1.4:+12097060 None:intergenic
ACACTAATCCATTGTGTTGC+TGG 0.346898 1.4:+12097781 None:intergenic
TTGCAGGTCATGGATATTCT+TGG 0.355219 1.4:-12099401 MS.gene021407:intron
AGGTTGTTGTTCTAACCTTT+GGG 0.362175 1.4:-12097567 MS.gene021407:CDS
TGGCCACTGCTGGAAGTAGA+TGG 0.368491 1.4:-12096968 MS.gene021407:CDS
CTTTAGGATGTCTGCTGAAA+TGG 0.375494 1.4:-12099235 MS.gene021407:intron
ATAAGATTGCTGCAAGTATT+GGG 0.378251 1.4:+12097061 None:intergenic
TTCTTCGCGGACGGCTACCC+TGG 0.381224 1.4:-12098292 MS.gene021407:CDS
TCAGAAACCCTAATTTGTTC+CGG 0.382437 1.4:+12100845 None:intergenic
GTGTTTATGGGTCTAATGTC+TGG 0.388332 1.4:+12097998 None:intergenic
ATAAATTACCTAAATACATC+TGG 0.391749 1.4:+12098495 None:intergenic
AGGTAGCAGAAGAGATGATT+TGG 0.392165 1.4:-12098342 MS.gene021407:CDS
ATACTTGCAGCAATCTTATA+AGG 0.401113 1.4:-12097057 MS.gene021407:CDS
TAGCTGCAGGGTGAAAATAA+AGG 0.408921 1.4:-12098187 MS.gene021407:intron
GGGAGAACCGCAGCTGATAA+AGG 0.410075 1.4:-12100782 MS.gene021407:CDS
CAGGTTCGGGTTTAGCGATC+GGG 0.426435 1.4:+12100999 None:intergenic
GTTTATGTTGGTCGTCGTAT+TGG 0.427782 1.4:-12100527 MS.gene021407:CDS
ATTGTTATGTCCCGTGGTGC+TGG 0.431009 1.4:-12096942 MS.gene021407:CDS
CTGATTATGGATGCCGGCAC+TGG 0.434575 1.4:-12097542 MS.gene021407:CDS
ACGTGCAGCGGCGGCGGCGA+TGG 0.440494 1.4:+12100931 None:intergenic
TATATTGCATCTATTTGTTA+CGG 0.443891 1.4:-12096523 MS.gene021407:CDS
TATGACCTGGTATCCTTGCC+AGG 0.447271 1.4:+12098274 None:intergenic
CGTCGTATTGGTGCCGGAGC+CGG 0.448238 1.4:-12100515 MS.gene021407:CDS
GTTAAGCTTATTTATCAGGT+TGG 0.450203 1.4:-12097877 MS.gene021407:intron
ACAAGGGACGGCAAGGTGAT+TGG 0.451632 1.4:-12099518 MS.gene021407:CDS
CGGCGGCGATGGTGTTGTTA+CGG 0.451967 1.4:+12100942 None:intergenic
TTTACTTTGACATGAGTACT+AGG 0.452416 1.4:+12096640 None:intergenic
TTGATCACGTGCAGCGGCGG+CGG 0.456771 1.4:+12100925 None:intergenic
GCCATAGCAGGATCTAATAG+TGG 0.459499 1.4:-12097271 MS.gene021407:CDS
TTTGAGCATAAAACCAGTAA+AGG 0.460416 1.4:-12099699 MS.gene021407:CDS
GGGTTATTTATCAGTAGTGT+AGG 0.469943 1.4:-12097587 MS.gene021407:CDS
AACTCAATAAACTGCCGAAA+AGG 0.471641 1.4:+12098100 None:intergenic
ATCGAAAAGGGATATGAAGA+TGG 0.473461 1.4:-12097608 MS.gene021407:CDS
TCGGCAGTTTATTGAGTTCG+TGG 0.473854 1.4:-12098095 MS.gene021407:CDS
TACAGAGTAGATAGGAAGCT+AGG 0.474012 1.4:-12100569 MS.gene021407:CDS
GCAGGTTCGGGTTTAGCGAT+CGG 0.477658 1.4:+12100998 None:intergenic
CTCATCCTTCTTCCTTCACA+AGG 0.477955 1.4:-12097495 MS.gene021407:intron
CTCATCATCATCTCCTTCCA+TGG 0.479092 1.4:+12097834 None:intergenic
GTCACTGCTATGGCCACTGC+TGG 0.481033 1.4:-12096978 MS.gene021407:CDS
GCCAAAGAAGAAAGTCAGAA+TGG 0.481635 1.4:-12097809 MS.gene021407:CDS
AACAAATAGATGCAATATAG+AGG 0.484055 1.4:+12096527 None:intergenic
TTGAGCATAAAACCAGTAAA+GGG 0.485067 1.4:-12099698 MS.gene021407:CDS
TGGACCTCCTTACGAGTGGC+AGG 0.485361 1.4:-12099667 MS.gene021407:CDS
GTGAATCATTTCCATTCAAG+TGG 0.485946 1.4:-12097031 MS.gene021407:CDS
GAATACCTTCACTAGGATAC+AGG 0.489180 1.4:+12096794 None:intergenic
AGGGTAGCCGTCCGCGAAGA+AGG 0.489461 1.4:+12098294 None:intergenic
AACAACCTTGTGAAGGAAGA+AGG 0.492459 1.4:+12097490 None:intergenic
GTTGTCCCAACACATCGAAA+AGG 0.495024 1.4:-12097621 MS.gene021407:CDS
GTGCAACAGGTTCAGGTGGG+TGG 0.497947 1.4:-12100602 MS.gene021407:intron
GATAGGAAGCTAGGGAAAGG+AGG 0.498291 1.4:-12100560 MS.gene021407:CDS
TACCTCAACAGCACCGGCTC+CGG 0.498945 1.4:+12100502 None:intergenic
GATGACTGTGATAGCGGCGG+TGG 0.500267 1.4:-12100803 MS.gene021407:CDS
CCTCTTCTACCTCGTGTAGC+AGG 0.507663 1.4:+12100980 None:intergenic
AGGAATGGATTATGGAACAG+TGG 0.508088 1.4:-12097315 MS.gene021407:CDS
GCTAGTGTACATGCTCATCT+TGG 0.512428 1.4:-12098371 MS.gene021407:CDS
TATTACATTAGTGCCATAGC+AGG 0.514536 1.4:-12097283 MS.gene021407:CDS
GTTGGTCGTCGTATTGGTGC+CGG 0.516374 1.4:-12100521 MS.gene021407:CDS
ATCTGAAAATCCAGCACCAC+GGG 0.518126 1.4:+12096932 None:intergenic
TTCCAAACATCCCATAAACT+AGG 0.518224 1.4:+12099377 None:intergenic
GTTTCTTGAGTTTCATCAGT+CGG 0.518437 1.4:+12096682 None:intergenic
CATGCTCATCTTGGTAGGAC+AGG 0.525496 1.4:-12098362 MS.gene021407:CDS
CCAAAGAAGAAAGTCAGAAT+GGG 0.530872 1.4:-12097808 MS.gene021407:CDS
AACCGCAGCTGATAAAGGTC+CGG 0.531660 1.4:-12100777 MS.gene021407:intron
ATAAACTGCCGAAAAGGTGC+GGG 0.538646 1.4:+12098106 None:intergenic
TTTGCCATGCAGCAACTCGT+TGG 0.539312 1.4:-12098560 MS.gene021407:intron
TTGTCCCAACACATCGAAAA+GGG 0.539526 1.4:-12097620 MS.gene021407:CDS
AAAACCTTTGCTTCATAGGT+CGG 0.541274 1.4:+12097746 None:intergenic
CGCGGACGGCTACCCTGGCA+AGG 0.543822 1.4:-12098287 MS.gene021407:CDS
CACCGATGTACAGAGTAGAT+AGG 0.545760 1.4:-12100577 MS.gene021407:CDS
ACAGAGTAGATAGGAAGCTA+GGG 0.546436 1.4:-12100568 MS.gene021407:CDS
AAACACTGACGGTGCTCAGA+AGG 0.548675 1.4:-12097981 MS.gene021407:intron
CGTCCCTTGTAATGAACTCG+TGG 0.549783 1.4:+12099531 None:intergenic
GCTACCCTGGCAAGGATACC+AGG 0.551712 1.4:-12098279 MS.gene021407:intron
TACTAAGAACAAGAGCGGCC+TGG 0.553288 1.4:+12096719 None:intergenic
GTGAAGGTATTCATCGAAGG+TGG 0.556433 1.4:-12096783 MS.gene021407:CDS
AAACGAACAACCTCACGTGC+CGG 0.557745 1.4:-12100864 MS.gene021407:CDS
GCATATCAGCAACATTGTAA+TGG 0.559923 1.4:+12097645 None:intergenic
TTTGTATGTAGTGTATTAGG+AGG 0.562063 1.4:-12099567 MS.gene021407:intron
TCCAAACATCCCATAAACTA+GGG 0.562426 1.4:+12099378 None:intergenic
GGAATGGATTATGGAACAGT+GGG 0.563150 1.4:-12097314 MS.gene021407:CDS
TGCCGGAGCCGGTGCTGTTG+AGG 0.563693 1.4:-12100504 MS.gene021407:intron
TTGTAAACCTGCCACTCGTA+AGG 0.564528 1.4:+12099660 None:intergenic
CACGAGTTCATTACAAGGGA+CGG 0.566096 1.4:-12099530 MS.gene021407:CDS
GCCGAAAAGGTGCGGGACAG+AGG 0.569844 1.4:+12098113 None:intergenic
TGGGCACTGATTATGGATGC+CGG 0.570860 1.4:-12097548 MS.gene021407:CDS
ATCTAATAGTGGGAGCTCGT+TGG 0.570915 1.4:-12097260 MS.gene021407:CDS
GATTTCCTGTATCCTAGTGA+AGG 0.571117 1.4:-12096799 MS.gene021407:CDS
GGCCACTGCTGGAAGTAGAT+GGG 0.571298 1.4:-12096967 MS.gene021407:CDS
CTTCGATGAATACCTTCACT+AGG 0.572280 1.4:+12096787 None:intergenic
AGAGGACGGTTGACCATGGA+AGG 0.574941 1.4:-12097847 MS.gene021407:CDS
CTAATTTGTTCCGGCACGTG+AGG 0.575786 1.4:+12100854 None:intergenic
CCATCATACCTCAACAGCAC+CGG 0.576707 1.4:+12100496 None:intergenic
TCGAAAAGGGATATGAAGAT+GGG 0.578550 1.4:-12097607 MS.gene021407:CDS
CCTGCTACACGAGGTAGAAG+AGG 0.583611 1.4:-12100980 MS.gene021407:CDS
CGTTGGCGTGATAATTCGAC+TGG 0.587524 1.4:-12098543 MS.gene021407:CDS
GCAAGGTGATTGGTATGTCA+TGG 0.589006 1.4:-12099508 MS.gene021407:intron
CGCGCCGACCTATGAAGCAA+AGG 0.589757 1.4:-12097750 MS.gene021407:intron
AACTGCTGCTACATATGACC+AGG 0.592537 1.4:-12096737 MS.gene021407:CDS
TACTTGATCACGTGCAGCGG+CGG 0.595072 1.4:+12100922 None:intergenic
AACCGGACCTTTATCAGCTG+CGG 0.595722 1.4:+12100775 None:intergenic
AATAAACTGCCGAAAAGGTG+CGG 0.597388 1.4:+12098105 None:intergenic
GTGTACATGCTCATCTTGGT+AGG 0.600986 1.4:-12098367 MS.gene021407:CDS
TTTCTGGTTCGAAGTTGAGG+AGG 0.607805 1.4:+12101058 None:intergenic
GTAGATAGGAAGCTAGGGAA+AGG 0.610159 1.4:-12100563 MS.gene021407:CDS
TTGTGCAGTGAAACCAGTGC+CGG 0.610323 1.4:+12097529 None:intergenic
TGCCCATCTACTTCCAGCAG+TGG 0.611695 1.4:+12096965 None:intergenic
CCATAGCAGGATCTAATAGT+GGG 0.612424 1.4:-12097270 MS.gene021407:CDS
CCCACTATTAGATCCTGCTA+TGG 0.617210 1.4:+12097270 None:intergenic
TCTCTTCATGAGTTCCCGGA+GGG 0.618779 1.4:+12098711 None:intergenic
GTTCATTACAAGGGACGGCA+AGG 0.622003 1.4:-12099525 MS.gene021407:CDS
TATCAGGTTGGACAGAAGAG+AGG 0.622077 1.4:-12097865 MS.gene021407:CDS
GAAGAGAGGACGGTTGACCA+TGG 0.624209 1.4:-12097851 MS.gene021407:CDS
TTGTACTTGATCACGTGCAG+CGG 0.625961 1.4:+12100919 None:intergenic
TGAAGGTATTCATCGAAGGT+GGG 0.628022 1.4:-12096782 MS.gene021407:CDS
TCGTTGGTTGTAATGTCGAA+AGG 0.629923 1.4:-12097244 MS.gene021407:intron
TTCTCTTCATGAGTTCCCGG+AGG 0.630312 1.4:+12098710 None:intergenic
TTCCTATCTACTCTGTACAT+CGG 0.632869 1.4:+12100575 None:intergenic
TGGGAATGCCAGCAACACAA+TGG 0.633757 1.4:-12097789 MS.gene021407:CDS
CTAGTGAAGGTATTCATCGA+AGG 0.635960 1.4:-12096786 MS.gene021407:CDS
TAGAGAAGATGCATTCTAGA+GGG 0.637214 1.4:-12099179 MS.gene021407:intron
TTTGTGCAACAGGTTCAGGT+GGG 0.638924 1.4:-12100605 MS.gene021407:intron
ATTTGTTTCAGATATGTGCA+TGG 0.641831 1.4:-12098764 MS.gene021407:intron
ATGACCTGGTATCCTTGCCA+GGG 0.644585 1.4:+12098275 None:intergenic
TTAGAGAAGATGCATTCTAG+AGG 0.645638 1.4:-12099180 MS.gene021407:CDS
ATTCATCGAAGGTGGGACAA+TGG 0.646078 1.4:-12096775 MS.gene021407:CDS
TGGGCAATTGTTATGTCCCG+TGG 0.648130 1.4:-12096948 MS.gene021407:CDS
TGTCCCACGAGTTCATTACA+AGG 0.652591 1.4:-12099535 MS.gene021407:CDS
AATGAACTCGTGGGACACCA+TGG 0.653940 1.4:+12099541 None:intergenic
TAAACCTGCCACTCGTAAGG+AGG 0.654486 1.4:+12099663 None:intergenic
CATCCATAATCAGTGCCCAA+AGG 0.657903 1.4:+12097552 None:intergenic
ATGACTGTGATAGCGGCGGT+GGG 0.665147 1.4:-12100802 MS.gene021407:CDS
GGTGTCGTGTATAGCAATCG+AGG 0.667047 1.4:-12099214 MS.gene021407:CDS
AGTGTATTAGGAGGTAGCCA+TGG 0.671950 1.4:-12099558 MS.gene021407:CDS
GATCTGAAAATCCAGCACCA+CGG 0.671996 1.4:+12096931 None:intergenic
GTCCCTTGTAATGAACTCGT+GGG 0.673497 1.4:+12099532 None:intergenic
ATTACAATGTTGCTGATATG+CGG 0.677018 1.4:-12097643 MS.gene021407:CDS
ATGGATGATGACTGTGATAG+CGG 0.678914 1.4:-12100809 MS.gene021407:CDS
AGGTTGGACAGAAGAGAGGA+CGG 0.682501 1.4:-12097861 MS.gene021407:CDS
ATTAGACCCATAAACACTGA+CGG 0.692330 1.4:-12097992 MS.gene021407:CDS
GTCCCACGAGTTCATTACAA+GGG 0.693718 1.4:-12099534 MS.gene021407:CDS
TGGAATACTAAGAACAAGAG+CGG 0.693783 1.4:+12096714 None:intergenic
TAGCAGCAGTTGAAGTAATG+CGG 0.693804 1.4:+12096749 None:intergenic
ATTATGGACCTCCTTACGAG+TGG 0.700752 1.4:-12099671 MS.gene021407:CDS
AAACCCGAACCTGCTACACG+AGG 0.727738 1.4:-12100989 MS.gene021407:CDS
GATGATGACTGTGATAGCGG+CGG 0.731600 1.4:-12100806 MS.gene021407:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATAAAAAATGGAAAGA+AGG - chr1.4:12100560-12100579 MS.gene021407:CDS 15.0%
!! TTATTTGCATTTCTAATTTA+CGG - chr1.4:12099092-12099111 MS.gene021407:intron 15.0%
!!! AAGATTTTATTTTTTTATCG+AGG - chr1.4:12098096-12098115 MS.gene021407:CDS 15.0%
!!! AGAAAAAAAATTACTTTTTC+AGG + chr1.4:12096849-12096868 None:intergenic 15.0%
!!! AGATTTTATTTTTTTATCGA+GGG - chr1.4:12098097-12098116 MS.gene021407:CDS 15.0%
!!! ATAACTACTTTTGTTTTTAT+AGG - chr1.4:12100233-12100252 MS.gene021407:intron 15.0%
!!! TTCAATTTTATTTTTTAACC+TGG - chr1.4:12098137-12098156 MS.gene021407:CDS 15.0%
!! AATAAAAACATCAATCAATG+TGG + chr1.4:12097468-12097487 None:intergenic 20.0%
!! ATAAATTACCTAAATACATC+TGG + chr1.4:12099076-12099095 None:intergenic 20.0%
!! ATCGAAAAGTGATATATATT+TGG + chr1.4:12099532-12099551 None:intergenic 20.0%
!! GATATATATTTGGCATAATT+TGG + chr1.4:12099522-12099541 None:intergenic 20.0%
!! GTAATTGACTATATTGTATT+AGG - chr1.4:12100394-12100413 MS.gene021407:intron 20.0%
!! TATTAAAAACAAATATGACC+TGG + chr1.4:12099310-12099329 None:intergenic 20.0%
!! TTATGATTGTAAATTGATGT+CGG - chr1.4:12097215-12097234 MS.gene021407:intron 20.0%
!!! AAAATTACTTTTTCAGGAAT+AGG + chr1.4:12096843-12096862 None:intergenic 20.0%
!!! AAATATATATCACTTTTCGA+TGG - chr1.4:12099531-12099550 MS.gene021407:CDS 20.0%
!!! AGCTAACAATTTTATTAGAA+CGG + chr1.4:12099366-12099385 None:intergenic 20.0%
!!! AGTGATTTGCATTTTTATTT+CGG + chr1.4:12098723-12098742 None:intergenic 20.0%
!!! ATAATTTTAGCAACATACAA+TGG + chr1.4:12097973-12097992 None:intergenic 20.0%
!!! CTTTCTTGCATATTTTTTTT+GGG - chr1.4:12098571-12098590 MS.gene021407:intron 20.0%
!!! TAACTGTATTTTCTATTTTG+TGG - chr1.4:12098310-12098329 MS.gene021407:CDS 20.0%
!!! TACTTTTGTTTTTATAGGAA+TGG - chr1.4:12100238-12100257 MS.gene021407:intron 20.0%
!!! TATATTGCATCTATTTGTTA+CGG - chr1.4:12101045-12101064 MS.gene021407:CDS 20.0%
!!! TCAAGTGGATTAATAAAAAA+TGG - chr1.4:12100552-12100571 MS.gene021407:CDS 20.0%
!!! TCAATTATTCATTTTTACGT+CGG + chr1.4:12097337-12097356 None:intergenic 20.0%
!!! TCAATTTTTTTTTATCTGCA+TGG - chr1.4:12096886-12096905 MS.gene021407:intron 20.0%
!!! TTAGGTTATTTTGCATATTT+TGG - chr1.4:12100412-12100431 MS.gene021407:intron 20.0%
!!! TTTCTTGCATATTTTTTTTG+GGG - chr1.4:12098572-12098591 MS.gene021407:intron 20.0%
!!! TTTTAAAATTTTTGTGCAAC+AGG - chr1.4:12096953-12096972 MS.gene021407:CDS 20.0%
!!! TTTTTATTAATCCACTTGAA+TGG + chr1.4:12100551-12100570 None:intergenic 20.0%
! AAAAAATAACAACCTTGTGA+AGG + chr1.4:12100088-12100107 None:intergenic 25.0%
! AACAAATAGATGCAATATAG+AGG + chr1.4:12101044-12101063 None:intergenic 25.0%
! AATAAATCAAAAACAGGATC+AGG + chr1.4:12098428-12098447 None:intergenic 25.0%
! TAATAAAATTGTTAGCTGCA+GGG - chr1.4:12099369-12099388 MS.gene021407:CDS 25.0%
! TAATGTATTCTTCACTGTAT+TGG - chr1.4:12100184-12100203 MS.gene021407:intron 25.0%
! TCCACAAATAAATCAAAAAC+AGG + chr1.4:12098434-12098453 None:intergenic 25.0%
! TGAAGTTAAATGAGTCTTTA+TGG - chr1.4:12099849-12099868 MS.gene021407:intron 25.0%
! TGATTGAAAATTGATGTCAA+TGG - chr1.4:12097363-12097382 MS.gene021407:intron 25.0%
! TGTAGGAATATCATAAAAAC+TGG - chr1.4:12097541-12097560 MS.gene021407:CDS 25.0%
! TTCATGATTAAAGAAGACTA+TGG + chr1.4:12100977-12100996 None:intergenic 25.0%
! TTGTTTGTATGTAGTGTATT+AGG - chr1.4:12097998-12098017 MS.gene021407:CDS 25.0%
! TTTCATTCATAATCAAAGTC+TGG - chr1.4:12097513-12097532 MS.gene021407:CDS 25.0%
!! ATTTTCTATTTTGTGGCTTT+AGG - chr1.4:12098317-12098336 MS.gene021407:CDS 25.0%
!!! ATGATAAAGTATTGTCTATG+TGG - chr1.4:12097145-12097164 MS.gene021407:intron 25.0%
!!! ATGTTTGATGTTATTTTTGC+AGG - chr1.4:12101002-12101021 MS.gene021407:CDS 25.0%
!!! GCTTTCTTGCATATTTTTTT+TGG - chr1.4:12098570-12098589 MS.gene021407:intron 25.0%
!!! GTTATTTTTGCAGGAAAAAT+GGG - chr1.4:12101011-12101030 MS.gene021407:CDS 25.0%
!!! GTTTTTATAGGAATGGATTA+TGG - chr1.4:12100245-12100264 MS.gene021407:intron 25.0%
!!! GTTTTTTATTCTTTTTGTCC+AGG - chr1.4:12099898-12099917 MS.gene021407:intron 25.0%
!!! TCCTGTTTTTGATTTATTTG+TGG - chr1.4:12098430-12098449 MS.gene021407:intron 25.0%
!!! TCTCTTCTAAAATTAATTCC+AGG - chr1.4:12100735-12100754 MS.gene021407:intron 25.0%
!!! TGATAAAGTATTGTCTATGT+GGG - chr1.4:12097146-12097165 MS.gene021407:intron 25.0%
!!! TGTTATTTTTGCAGGAAAAA+TGG - chr1.4:12101010-12101029 MS.gene021407:CDS 25.0%
!!! TTCTTGCATATTTTTTTTGG+GGG - chr1.4:12098573-12098592 MS.gene021407:intron 25.0%
AACTCAGCTTAAATTAGTTG+GGG - chr1.4:12098664-12098683 MS.gene021407:intron 30.0%
ACAACATCATACTTATATGG+CGG + chr1.4:12097422-12097441 None:intergenic 30.0%
ACCACAACATCATACTTATA+TGG + chr1.4:12097425-12097444 None:intergenic 30.0%
AGAAGAGAAAACATCACATA+TGG + chr1.4:12100723-12100742 None:intergenic 30.0%
AGAATGCATCTTCTCTAATA+TGG + chr1.4:12098386-12098405 None:intergenic 30.0%
AGATTACTGTTTACAGATGA+GGG - chr1.4:12099632-12099651 MS.gene021407:intron 30.0%
ATAAGATTGCTGCAAGTATT+GGG + chr1.4:12100510-12100529 None:intergenic 30.0%
ATACTTGCAGCAATCTTATA+AGG - chr1.4:12100511-12100530 MS.gene021407:CDS 30.0%
ATGGTAATAAATGAGCTGAA+AGG + chr1.4:12097954-12097973 None:intergenic 30.0%
ATTACAATGTTGCTGATATG+CGG - chr1.4:12099925-12099944 MS.gene021407:intron 30.0%
ATTTGTTTCAGATATGTGCA+TGG - chr1.4:12098804-12098823 MS.gene021407:intron 30.0%
CAACTCAGCTTAAATTAGTT+GGG - chr1.4:12098663-12098682 MS.gene021407:intron 30.0%
CTAAAATTAATTCCAGGTTG+TGG - chr1.4:12100741-12100760 MS.gene021407:intron 30.0%
CTAATAAAATTGTTAGCTGC+AGG - chr1.4:12099368-12099387 MS.gene021407:CDS 30.0%
GGTAATAACAATTGCTTGTT+TGG - chr1.4:12097649-12097668 MS.gene021407:CDS 30.0%
GTAAATAAAAGAGAGATCAC+CGG - chr1.4:12097738-12097757 MS.gene021407:intron 30.0%
GTTAAGCTTATTTATCAGGT+TGG - chr1.4:12099691-12099710 MS.gene021407:CDS 30.0%
TATAAGATTGCTGCAAGTAT+TGG + chr1.4:12100511-12100530 None:intergenic 30.0%
TCAACTCAGCTTAAATTAGT+TGG - chr1.4:12098662-12098681 MS.gene021407:intron 30.0%
TGCTGTTAAGCTTATTTATC+AGG - chr1.4:12099687-12099706 MS.gene021407:CDS 30.0%
TTAACCTGGAATTATATTGC+AGG - chr1.4:12098151-12098170 MS.gene021407:CDS 30.0%
TTCTGATAAGCAAGAGATTA+TGG - chr1.4:12096740-12096759 MS.gene021407:CDS 30.0%
TTGAGCATAAAACCAGTAAA+GGG - chr1.4:12097870-12097889 MS.gene021407:CDS 30.0%
TTTACTTTGACATGAGTACT+AGG + chr1.4:12100931-12100950 None:intergenic 30.0%
TTTGAGCATAAAACCAGTAA+AGG - chr1.4:12097869-12097888 MS.gene021407:CDS 30.0%
TTTGTATGTAGTGTATTAGG+AGG - chr1.4:12098001-12098020 MS.gene021407:CDS 30.0%
! GAATTTTCTGATCAAAATCC+AGG - chr1.4:12099116-12099135 MS.gene021407:intron 30.0%
! TCTTGTTGCTAATATTTTCC+TGG - chr1.4:12099660-12099679 MS.gene021407:CDS 30.0%
! TCTTGTTTGCAAGAAGAAAA+TGG - chr1.4:12099407-12099426 MS.gene021407:intron 30.0%
! TTGTGCAATGAATAATTTGC+AGG - chr1.4:12097835-12097854 MS.gene021407:CDS 30.0%
!! GTCTCTGATCATTTTAACAT+TGG + chr1.4:12099875-12099894 None:intergenic 30.0%
!! TCATTTTTACGTCGGATATT+AGG + chr1.4:12097329-12097348 None:intergenic 30.0%
!! TGAAGAGAAAAAGCTTTTTC+TGG - chr1.4:12098872-12098891 MS.gene021407:intron 30.0%
!!! ATTACTTTTTCAGGAATAGG+CGG + chr1.4:12096840-12096859 None:intergenic 30.0%
!!! ATTTTTTTATCGAGGGCTAT+GGG - chr1.4:12098104-12098123 MS.gene021407:CDS 30.0%
!!! TATTTTTTTATCGAGGGCTA+TGG - chr1.4:12098103-12098122 MS.gene021407:CDS 30.0%
AAAACCTTTGCTTCATAGGT+CGG + chr1.4:12099825-12099844 None:intergenic 35.0%
AAATTAGTTGGGGTCTAATG+TGG - chr1.4:12098674-12098693 MS.gene021407:intron 35.0%
AACTCAATAAACTGCCGAAA+AGG + chr1.4:12099471-12099490 None:intergenic 35.0%
ACTGCAAATTACACACACTA+AGG + chr1.4:12097799-12097818 None:intergenic 35.0%
ATATTCTTGGCCCTAGTTTA+TGG - chr1.4:12098180-12098199 MS.gene021407:CDS 35.0%
ATCAAAGTCTGGATACATGT+AGG - chr1.4:12097524-12097543 MS.gene021407:CDS 35.0%
ATCAACGTCCAGATGTATTT+AGG - chr1.4:12099065-12099084 MS.gene021407:intron 35.0%
ATCGAAAAGGGATATGAAGA+TGG - chr1.4:12099960-12099979 MS.gene021407:intron 35.0%
ATCTGTATCACATTCACCAT+AGG + chr1.4:12097302-12097321 None:intergenic 35.0%
ATGACCTGCAATATAATTCC+AGG + chr1.4:12098158-12098177 None:intergenic 35.0%
ATTAGACCCATAAACACTGA+CGG - chr1.4:12099576-12099595 MS.gene021407:intron 35.0%
ATTGCCATATTCTTGCAACA+GGG - chr1.4:12099160-12099179 MS.gene021407:intron 35.0%
CCAAAGAAGAAAGTCAGAAT+GGG - chr1.4:12099760-12099779 MS.gene021407:intron 35.0%
CCCATTAAAAAAGAATGCAC+CGG + chr1.4:12097760-12097779 None:intergenic 35.0%
GAAGAAAACCTTTGCTTCAT+AGG + chr1.4:12099829-12099848 None:intergenic 35.0%
GAGATTACTGTTTACAGATG+AGG - chr1.4:12099631-12099650 MS.gene021407:intron 35.0%
GCATATCAGCAACATTGTAA+TGG + chr1.4:12099926-12099945 None:intergenic 35.0%
GCCATATAAGTATGATGTTG+TGG - chr1.4:12097421-12097440 MS.gene021407:intron 35.0%
GGACACAAAAAGCTTAATCT+AGG + chr1.4:12098634-12098653 None:intergenic 35.0%
GGGTTATTTATCAGTAGTGT+AGG - chr1.4:12099981-12100000 MS.gene021407:intron 35.0%
GTGAATCATTTCCATTCAAG+TGG - chr1.4:12100537-12100556 MS.gene021407:CDS 35.0%
GTTTCTTGAGTTTCATCAGT+CGG + chr1.4:12100889-12100908 None:intergenic 35.0%
TAATCTAGGTACACACACTA+CGG + chr1.4:12098620-12098639 None:intergenic 35.0%
TAGAGAAGATGCATTCTAGA+GGG - chr1.4:12098389-12098408 MS.gene021407:CDS 35.0%
TATTACATTAGTGCCATAGC+AGG - chr1.4:12100285-12100304 MS.gene021407:intron 35.0%
TATTCTTGGCCCTAGTTTAT+GGG - chr1.4:12098181-12098200 MS.gene021407:CDS 35.0%
TCCAAACATCCCATAAACTA+GGG + chr1.4:12098193-12098212 None:intergenic 35.0%
TCCATAATTACACCCTTTAC+TGG + chr1.4:12097885-12097904 None:intergenic 35.0%
TCGAAAAGGGATATGAAGAT+GGG - chr1.4:12099961-12099980 MS.gene021407:intron 35.0%
TCGTTAAAGCTCTATTCTTC+AGG - chr1.4:12100351-12100370 MS.gene021407:intron 35.0%
TGCAAGGAGACAAACTAATA+CGG + chr1.4:12097612-12097631 None:intergenic 35.0%
TGGAATACTAAGAACAAGAG+CGG + chr1.4:12100857-12100876 None:intergenic 35.0%
TGGAATTATATTGCAGGTCA+TGG - chr1.4:12098157-12098176 MS.gene021407:CDS 35.0%
TGGAGAACTAGCATTATATG+TGG - chr1.4:12097561-12097580 MS.gene021407:CDS 35.0%
TGTTATTACCAACTCTCATG+TGG + chr1.4:12097639-12097658 None:intergenic 35.0%
TTAGAGAAGATGCATTCTAG+AGG - chr1.4:12098388-12098407 MS.gene021407:CDS 35.0%
TTCCAAACATCCCATAAACT+AGG + chr1.4:12098194-12098213 None:intergenic 35.0%
TTCCTATCTACTCTGTACAT+CGG + chr1.4:12096996-12097015 None:intergenic 35.0%
TTCTTCACTGTATTGGAACT+TGG - chr1.4:12100191-12100210 MS.gene021407:intron 35.0%
! AAACCTGAGAACTTTTTGCT+TGG - chr1.4:12098834-12098853 MS.gene021407:intron 35.0%
! AAGCTTTTTGTGTCCTTACT+AGG - chr1.4:12098639-12098658 MS.gene021407:intron 35.0%
! AATTTTTGTGCAACAGGTTC+AGG - chr1.4:12096959-12096978 MS.gene021407:CDS 35.0%
! ACACTAATTTTCCTTCTTCG+CGG - chr1.4:12099263-12099282 MS.gene021407:intron 35.0%
! ACCAGTAAAGGGTGTAATTA+TGG - chr1.4:12097881-12097900 MS.gene021407:intron 35.0%
! AGGTTGTTGTTCTAACCTTT+GGG - chr1.4:12100001-12100020 MS.gene021407:intron 35.0%
! ATATCCCTTTTCGATGTGTT+GGG + chr1.4:12099955-12099974 None:intergenic 35.0%
! ATTGATGTCAATGGTAACGA+TGG - chr1.4:12097372-12097391 MS.gene021407:intron 35.0%
! CAGAGGATACACATATTTTC+TGG + chr1.4:12099441-12099460 None:intergenic 35.0%
! CGTGTCTTGATTTTTACTGT+TGG - chr1.4:12098269-12098288 MS.gene021407:intron 35.0%
! GTGGATTTTTCATTACTGCA+CGG - chr1.4:12098449-12098468 MS.gene021407:intron 35.0%
! TAGGTTGTTGTTCTAACCTT+TGG - chr1.4:12100000-12100019 MS.gene021407:intron 35.0%
! TCTTCAGGCATTTGGTATTT+TGG - chr1.4:12100366-12100385 MS.gene021407:intron 35.0%
! TGCAATGAATAATTTGCAGG+TGG - chr1.4:12097838-12097857 MS.gene021407:CDS 35.0%
! TTAGTGTGTGTAATTTGCAG+TGG - chr1.4:12097798-12097817 MS.gene021407:CDS 35.0%
! TTTTTCATTACTGCACGGAT+TGG - chr1.4:12098454-12098473 MS.gene021407:intron 35.0%
! TTTTTCTCTTCATGAGTTCC+CGG + chr1.4:12098864-12098883 None:intergenic 35.0%
!! ATTCGGATTCGGGTTATTTT+TGG + chr1.4:12096538-12096557 None:intergenic 35.0%
!! TCACTTTTCGATGGAATTGT+TGG - chr1.4:12099540-12099559 MS.gene021407:CDS 35.0%
!! TCAGAAACCCTAATTTGTTC+CGG + chr1.4:12096726-12096745 None:intergenic 35.0%
!! TTGATGTCGGTGTTATTGAT+TGG - chr1.4:12097228-12097247 MS.gene021407:intron 35.0%
!!! ACCGGTGCATTCTTTTTTAA+TGG - chr1.4:12097756-12097775 MS.gene021407:CDS 35.0%
!!! CAATCAATGCTTGCTTTTTG+AGG + chr1.4:12097681-12097700 None:intergenic 35.0%
!!! CCGGTGCATTCTTTTTTAAT+GGG - chr1.4:12097757-12097776 MS.gene021407:CDS 35.0%
!!! CGGGTTATTTTTGGTTTTTC+TGG + chr1.4:12096529-12096548 None:intergenic 35.0%
!!! CGGTGCATTCTTTTTTAATG+GGG - chr1.4:12097758-12097777 MS.gene021407:CDS 35.0%
!!! GGTTTTGGACAAGTTTATGT+TGG - chr1.4:12097029-12097048 MS.gene021407:CDS 35.0%
!!! TGCATATTTTTTTTGGGGGT+GGG - chr1.4:12098577-12098596 MS.gene021407:intron 35.0%
!!! TTATTTCGGTTTTAGACCCA+CGG + chr1.4:12098709-12098728 None:intergenic 35.0%
!!! TTGCATATTTTTTTTGGGGG+TGG - chr1.4:12098576-12098595 MS.gene021407:intron 35.0%
AACAACCTTGTGAAGGAAGA+AGG + chr1.4:12100081-12100100 None:intergenic 40.0%
AATAAACTGCCGAAAAGGTG+CGG + chr1.4:12099466-12099485 None:intergenic 40.0%
AATCTAGGTACACACACTAC+GGG + chr1.4:12098619-12098638 None:intergenic 40.0%
ACAACACTGTACTTGTATGG+CGG + chr1.4:12097277-12097296 None:intergenic 40.0%
ACACTAATCCATTGTGTTGC+TGG + chr1.4:12099790-12099809 None:intergenic 40.0%
ACAGAGTAGATAGGAAGCTA+GGG - chr1.4:12097000-12097019 MS.gene021407:CDS 40.0%
ACTATGTCTCTCACTTCTAC+TGG - chr1.4:12100464-12100483 MS.gene021407:intron 40.0%
AGCAACATTGTAATGGTACC+TGG + chr1.4:12099919-12099938 None:intergenic 40.0%
AGCTCTATTCTTCAGGCATT+TGG - chr1.4:12100358-12100377 MS.gene021407:intron 40.0%
AGGTAGCAGAAGAGATGATT+TGG - chr1.4:12099226-12099245 MS.gene021407:CDS 40.0%
ATGGATGATGACTGTGATAG+CGG - chr1.4:12096759-12096778 MS.gene021407:CDS 40.0%
ATGGGTCTAATGTCTGGATT+TGG + chr1.4:12099567-12099586 None:intergenic 40.0%
CATCAAAATCAACCAAAGCC+TGG + chr1.4:12099137-12099156 None:intergenic 40.0%
CCATAGCAGGATCTAATAGT+GGG - chr1.4:12100298-12100317 MS.gene021407:intron 40.0%
CCCATTCTGACTTTCTTCTT+TGG + chr1.4:12099763-12099782 None:intergenic 40.0%
CTTCGATGAATACCTTCACT+AGG + chr1.4:12100784-12100803 None:intergenic 40.0%
GAATACCTTCACTAGGATAC+AGG + chr1.4:12100777-12100796 None:intergenic 40.0%
GATTGCCATATTCTTGCAAC+AGG - chr1.4:12099159-12099178 MS.gene021407:intron 40.0%
GATTTCCTGTATCCTAGTGA+AGG - chr1.4:12100769-12100788 MS.gene021407:intron 40.0%
GCCAAAGAAGAAAGTCAGAA+TGG - chr1.4:12099759-12099778 MS.gene021407:intron 40.0%
GTGTTTATGGGTCTAATGTC+TGG + chr1.4:12099573-12099592 None:intergenic 40.0%
GTTAAACTGTGAAAGCCACA+AGG + chr1.4:12098548-12098567 None:intergenic 40.0%
GTTTATGTTGGTCGTCGTAT+TGG - chr1.4:12097041-12097060 MS.gene021407:CDS 40.0%
TAAGCTTAACAGCACAAACC+AGG + chr1.4:12099681-12099700 None:intergenic 40.0%
TACAGAGTAGATAGGAAGCT+AGG - chr1.4:12096999-12097018 MS.gene021407:CDS 40.0%
TAGCAGCAGTTGAAGTAATG+CGG + chr1.4:12100822-12100841 None:intergenic 40.0%
TAGCTGCAGGGTGAAAATAA+AGG - chr1.4:12099381-12099400 MS.gene021407:CDS 40.0%
TCTACCTTGCCAAGAAAAGT+TGG - chr1.4:12098918-12098937 MS.gene021407:intron 40.0%
TCTGATCAAAATCCAGGCTT+TGG - chr1.4:12099122-12099141 MS.gene021407:intron 40.0%
TGTGGCTTTCACAGTTTAAC+AGG - chr1.4:12098548-12098567 MS.gene021407:CDS 40.0%
TTGCAGGTCATGGATATTCT+TGG - chr1.4:12098167-12098186 MS.gene021407:CDS 40.0%
TTGCCATATTCTTGCAACAG+GGG - chr1.4:12099161-12099180 MS.gene021407:intron 40.0%
TTGTCCCAACACATCGAAAA+GGG - chr1.4:12099948-12099967 MS.gene021407:intron 40.0%
! AGGATTTTTCGTCACTGCTA+TGG - chr1.4:12100580-12100599 MS.gene021407:CDS 40.0%
! CACTTCTACTGGTGATTTGT+TGG - chr1.4:12100475-12100494 MS.gene021407:intron 40.0%
! CATATCCCTTTTCGATGTGT+TGG + chr1.4:12099956-12099975 None:intergenic 40.0%
! GTGTAAGCACCAACTTTTCT+TGG + chr1.4:12098930-12098949 None:intergenic 40.0%
! GTGTTATTGATTGGAGTTGG+CGG - chr1.4:12097237-12097256 MS.gene021407:intron 40.0%
! TAAGCTGAGTTGACCTAGTA+AGG + chr1.4:12098655-12098674 None:intergenic 40.0%
! TAATTTTCCTTCTTCGCGGA+CGG - chr1.4:12099267-12099286 MS.gene021407:intron 40.0%
! TCAATGGTAACGATGGTAGA+TGG - chr1.4:12097379-12097398 MS.gene021407:intron 40.0%
! TCGTTGGTTGTAATGTCGAA+AGG - chr1.4:12100324-12100343 MS.gene021407:intron 40.0%
! TGTTATTGATTGGAGTTGGC+GGG - chr1.4:12097238-12097257 MS.gene021407:intron 40.0%
! TTTCTGGTCGATCTTGGTTT+AGG - chr1.4:12098888-12098907 MS.gene021407:intron 40.0%
!! AAGCTTTTTCTGGTCGATCT+TGG - chr1.4:12098882-12098901 MS.gene021407:intron 40.0%
!! ACTGGTGATTTGTTGGTTTC+AGG - chr1.4:12100482-12100501 MS.gene021407:intron 40.0%
!! AGGAATGGATTATGGAACAG+TGG - chr1.4:12100253-12100272 MS.gene021407:intron 40.0%
!! CTAGTGAAGGTATTCATCGA+AGG - chr1.4:12100782-12100801 MS.gene021407:CDS 40.0%
!! CTGGTGATTTGTTGGTTTCA+GGG - chr1.4:12100483-12100502 MS.gene021407:intron 40.0%
!! CTTTAGGATGTCTGCTGAAA+TGG - chr1.4:12098333-12098352 MS.gene021407:CDS 40.0%
!! GATACACATATTTTCTGGCG+AGG + chr1.4:12099436-12099455 None:intergenic 40.0%
!! GCTCAAGCTTTAAGCAAAAG+CGG + chr1.4:12097587-12097606 None:intergenic 40.0%
!! GGAATGGATTATGGAACAGT+GGG - chr1.4:12100254-12100273 MS.gene021407:intron 40.0%
!! TAACCTTTGGGCACTGATTA+TGG - chr1.4:12100013-12100032 MS.gene021407:intron 40.0%
!! TCATCAGTCGGTTTTCTTCT+TGG + chr1.4:12100877-12100896 None:intergenic 40.0%
!! TCGGTGTTATTGATTGGAGT+TGG - chr1.4:12097234-12097253 MS.gene021407:intron 40.0%
!! TGAAGGTATTCATCGAAGGT+GGG - chr1.4:12100786-12100805 MS.gene021407:CDS 40.0%
!!! ATATTTTTTTTGGGGGTGGG+GGG - chr1.4:12098580-12098599 MS.gene021407:intron 40.0%
!!! CATATTTTTTTTGGGGGTGG+GGG - chr1.4:12098579-12098598 MS.gene021407:intron 40.0%
!!! GCATATTTTTTTTGGGGGTG+GGG - chr1.4:12098578-12098597 MS.gene021407:intron 40.0%
!!! GTGTTGTTACGGTTTTTAGC+AGG + chr1.4:12096618-12096637 None:intergenic 40.0%
!!! GTTTTTCTGGTTCGAAGTTG+AGG + chr1.4:12096516-12096535 None:intergenic 40.0%
!!! TTCGGGTTTTGATTCGGATT+CGG + chr1.4:12096549-12096568 None:intergenic 40.0%
AACTGCTGCTACATATGACC+AGG - chr1.4:12100831-12100850 MS.gene021407:CDS 45.0%
AAGTACAGTGTTGTGGCCTA+TGG - chr1.4:12097283-12097302 MS.gene021407:CDS 45.0%
ACTCTCATGTGGAGTTTGCA+AGG + chr1.4:12097628-12097647 None:intergenic 45.0%
AGTGAGAGACATAGTCACAC+AGG + chr1.4:12100459-12100478 None:intergenic 45.0%
AGTGTATTAGGAGGTAGCCA+TGG - chr1.4:12098010-12098029 MS.gene021407:CDS 45.0%
ATCTGAAAATCCAGCACCAC+GGG + chr1.4:12100639-12100658 None:intergenic 45.0%
ATTATGGACCTCCTTACGAG+TGG - chr1.4:12097897-12097916 MS.gene021407:intron 45.0%
ATTCATCGAAGGTGGGACAA+TGG - chr1.4:12100793-12100812 MS.gene021407:CDS 45.0%
CACCGATGTACAGAGTAGAT+AGG - chr1.4:12096991-12097010 MS.gene021407:CDS 45.0%
CACGAGTTCATTACAAGGGA+CGG - chr1.4:12098038-12098057 MS.gene021407:CDS 45.0%
CATCCATAATCAGTGCCCAA+AGG + chr1.4:12100019-12100038 None:intergenic 45.0%
CATGCTAAACCAGTCATGCT+AGG - chr1.4:12098487-12098506 MS.gene021407:intron 45.0%
CCCACTATTAGATCCTGCTA+TGG + chr1.4:12100301-12100320 None:intergenic 45.0%
CTCATCATCATCTCCTTCCA+TGG + chr1.4:12099737-12099756 None:intergenic 45.0%
CTCATCCTTCTTCCTTCACA+AGG - chr1.4:12100073-12100092 MS.gene021407:intron 45.0%
GATCTGAAAATCCAGCACCA+CGG + chr1.4:12100640-12100659 None:intergenic 45.0%
GCAAGGTGATTGGTATGTCA+TGG - chr1.4:12098060-12098079 MS.gene021407:CDS 45.0%
GCCACAACACTGTACTTGTA+TGG + chr1.4:12097280-12097299 None:intergenic 45.0%
GCCATACAAGTACAGTGTTG+TGG - chr1.4:12097276-12097295 MS.gene021407:CDS 45.0%
GCCATAGCAGGATCTAATAG+TGG - chr1.4:12100297-12100316 MS.gene021407:intron 45.0%
GCCCTAGTTTATGGGATGTT+TGG - chr1.4:12098189-12098208 MS.gene021407:intron 45.0%
GCTAGTGTACATGCTCATCT+TGG - chr1.4:12099197-12099216 MS.gene021407:CDS 45.0%
GTAGATAGGAAGCTAGGGAA+AGG - chr1.4:12097005-12097024 MS.gene021407:CDS 45.0%
GTCCCACGAGTTCATTACAA+GGG - chr1.4:12098034-12098053 MS.gene021407:CDS 45.0%
GTCCCTTGTAATGAACTCGT+GGG + chr1.4:12098039-12098058 None:intergenic 45.0%
GTGTACATGCTCATCTTGGT+AGG - chr1.4:12099201-12099220 MS.gene021407:CDS 45.0%
GTTCCCCTGTTGCAAGAATA+TGG + chr1.4:12099167-12099186 None:intergenic 45.0%
GTTGTCCCAACACATCGAAA+AGG - chr1.4:12099947-12099966 MS.gene021407:intron 45.0%
TCACGTGCCGGAACAAATTA+GGG - chr1.4:12096716-12096735 MS.gene021407:CDS 45.0%
TCGGCAGTTTATTGAGTTCG+TGG - chr1.4:12099473-12099492 MS.gene021407:intron 45.0%
TGCAAACTCCACATGAGAGT+TGG - chr1.4:12097628-12097647 MS.gene021407:CDS 45.0%
TGTCCCACGAGTTCATTACA+AGG - chr1.4:12098033-12098052 MS.gene021407:CDS 45.0%
TTGGGGTCTAATGTGGCTTT+AGG - chr1.4:12098681-12098700 MS.gene021407:CDS 45.0%
TTGTAAACCTGCCACTCGTA+AGG + chr1.4:12097911-12097930 None:intergenic 45.0%
TTGTACTTGATCACGTGCAG+CGG + chr1.4:12096652-12096671 None:intergenic 45.0%
TTTGTGCAACAGGTTCAGGT+GGG - chr1.4:12096963-12096982 MS.gene021407:CDS 45.0%
! AAGCTAGGGAAAGGAGGTTT+TGG - chr1.4:12097014-12097033 MS.gene021407:CDS 45.0%
! AGCACCAACTTTTCTTGGCA+AGG + chr1.4:12098925-12098944 None:intergenic 45.0%
! ATAAACTGCCGAAAAGGTGC+GGG + chr1.4:12099465-12099484 None:intergenic 45.0%
! ATCTAATAGTGGGAGCTCGT+TGG - chr1.4:12100308-12100327 MS.gene021407:intron 45.0%
! ATGGTAACGATGGTAGATGG+CGG - chr1.4:12097382-12097401 MS.gene021407:intron 45.0%
! TGAGCACCGTCAGTGTTTAT+GGG + chr1.4:12099585-12099604 None:intergenic 45.0%
! TTTTGTGCAACAGGTTCAGG+TGG - chr1.4:12096962-12096981 MS.gene021407:CDS 45.0%
!! AATGTGGCTTTAGGATCCGT+GGG - chr1.4:12098690-12098709 MS.gene021407:CDS 45.0%
!! ACACATATTTTCTGGCGAGG+TGG + chr1.4:12099433-12099452 None:intergenic 45.0%
!! GTGAAGGTATTCATCGAAGG+TGG - chr1.4:12100785-12100804 MS.gene021407:CDS 45.0%
!! TAATGTGGCTTTAGGATCCG+TGG - chr1.4:12098689-12098708 MS.gene021407:CDS 45.0%
!! TATCAGGTTGGACAGAAGAG+AGG - chr1.4:12099703-12099722 MS.gene021407:CDS 45.0%
!! TGGTGCTGGATTTTCAGATC+AGG - chr1.4:12100640-12100659 MS.gene021407:intron 45.0%
!! TTTCTGGTTCGAAGTTGAGG+AGG + chr1.4:12096513-12096532 None:intergenic 45.0%
!!! ATCGGGTTCGGGTTTTGATT+CGG + chr1.4:12096555-12096574 None:intergenic 45.0%
!!! TATTTTTTTTGGGGGTGGGG+GGG - chr1.4:12098581-12098600 MS.gene021407:intron 45.0%
!!! TCGGGTTTTGATTCGGATTC+GGG + chr1.4:12096548-12096567 None:intergenic 45.0%
AAACACTGACGGTGCTCAGA+AGG - chr1.4:12099587-12099606 MS.gene021407:intron 50.0%
AAACGAACAACCTCACGTGC+CGG - chr1.4:12096704-12096723 MS.gene021407:CDS 50.0%
AACCGCAGCTGATAAAGGTC+CGG - chr1.4:12096791-12096810 MS.gene021407:CDS 50.0%
AACCGGACCTTTATCAGCTG+CGG + chr1.4:12096796-12096815 None:intergenic 50.0%
AATGAACTCGTGGGACACCA+TGG + chr1.4:12098030-12098049 None:intergenic 50.0%
AGGTTGGACAGAAGAGAGGA+CGG - chr1.4:12099707-12099726 MS.gene021407:CDS 50.0%
ATGACCTGGTATCCTTGCCA+GGG + chr1.4:12099296-12099315 None:intergenic 50.0%
ATTGTTATGTCCCGTGGTGC+TGG - chr1.4:12100626-12100645 MS.gene021407:intron 50.0%
CATGCTCATCTTGGTAGGAC+AGG - chr1.4:12099206-12099225 MS.gene021407:CDS 50.0%
CCAAAGAAGCCTAGCATGAC+TGG + chr1.4:12098499-12098518 None:intergenic 50.0%
CCAGTCATGCTAGGCTTCTT+TGG - chr1.4:12098496-12098515 MS.gene021407:intron 50.0%
CCATCATACCTCAACAGCAC+CGG + chr1.4:12097075-12097094 None:intergenic 50.0%
CGTAAGTTCATCTCTCGTGC+TGG - chr1.4:12098228-12098247 MS.gene021407:intron 50.0%
CGTCCCTTGTAATGAACTCG+TGG + chr1.4:12098040-12098059 None:intergenic 50.0%
CGTTGGCGTGATAATTCGAC+TGG - chr1.4:12099025-12099044 MS.gene021407:intron 50.0%
CTCACGTGCCGGAACAAATT+AGG - chr1.4:12096715-12096734 MS.gene021407:CDS 50.0%
CTCCCTTCATCTTCAGCAAC+CGG + chr1.4:12096813-12096832 None:intergenic 50.0%
GATAGGAAGCTAGGGAAAGG+AGG - chr1.4:12097008-12097027 MS.gene021407:CDS 50.0%
GGAAATCAAGCTCCACAACC+TGG + chr1.4:12100756-12100775 None:intergenic 50.0%
GGACACAGCACAATCAACTG+CGG + chr1.4:12100956-12100975 None:intergenic 50.0%
GGCAATTTCAGTTGCCAGAC+TGG - chr1.4:12098517-12098536 MS.gene021407:CDS 50.0%
GGCAGGTTTACAAGTGAGTG+TGG - chr1.4:12097918-12097937 MS.gene021407:intron 50.0%
GGGCCAAGCAAAAAGTTCTC+AGG + chr1.4:12098840-12098859 None:intergenic 50.0%
GTCCGGTTGCTGAAGATGAA+GGG - chr1.4:12096808-12096827 MS.gene021407:CDS 50.0%
GTTCATTACAAGGGACGGCA+AGG - chr1.4:12098043-12098062 MS.gene021407:CDS 50.0%
TAAACCTGCCACTCGTAAGG+AGG + chr1.4:12097908-12097927 None:intergenic 50.0%
TACTAAGAACAAGAGCGGCC+TGG + chr1.4:12100852-12100871 None:intergenic 50.0%
TATGACCTGGTATCCTTGCC+AGG + chr1.4:12099297-12099316 None:intergenic 50.0%
TCTACCTCGTGTAGCAGGTT+CGG + chr1.4:12096586-12096605 None:intergenic 50.0%
TCTCTTCATGAGTTCCCGGA+GGG + chr1.4:12098860-12098879 None:intergenic 50.0%
TGGGAATGCCAGCAACACAA+TGG - chr1.4:12099779-12099798 MS.gene021407:intron 50.0%
TGGGCAATTGTTATGTCCCG+TGG - chr1.4:12100620-12100639 MS.gene021407:intron 50.0%
TTCTCTTCATGAGTTCCCGG+AGG + chr1.4:12098861-12098880 None:intergenic 50.0%
TTGTGCAGTGAAACCAGTGC+CGG + chr1.4:12100042-12100061 None:intergenic 50.0%
TTTGCCATGCAGCAACTCGT+TGG - chr1.4:12099008-12099027 MS.gene021407:intron 50.0%
! AACTTTTTGCTTGGCCCTCC+GGG - chr1.4:12098843-12098862 MS.gene021407:intron 50.0%
! CTGAGCACCGTCAGTGTTTA+TGG + chr1.4:12099586-12099605 None:intergenic 50.0%
! GAACTTTTTGCTTGGCCCTC+CGG - chr1.4:12098842-12098861 MS.gene021407:intron 50.0%
! GGTGTCGTGTATAGCAATCG+AGG - chr1.4:12098354-12098373 MS.gene021407:CDS 50.0%
! TGGTAACGATGGTAGATGGC+GGG - chr1.4:12097383-12097402 MS.gene021407:intron 50.0%
!! CTAATTTGTTCCGGCACGTG+AGG + chr1.4:12096717-12096736 None:intergenic 50.0%
!! CTGCACGGATTGGATATAGC+CGG - chr1.4:12098464-12098483 MS.gene021407:intron 50.0%
!! GATGATGACTGTGATAGCGG+CGG - chr1.4:12096762-12096781 MS.gene021407:CDS 50.0%
!! GCATGACTGGTTTAGCATGC+CGG + chr1.4:12098486-12098505 None:intergenic 50.0%
!! TGGGCACTGATTATGGATGC+CGG - chr1.4:12100020-12100039 MS.gene021407:intron 50.0%
AAACCCGAACCTGCTACACG+AGG - chr1.4:12096579-12096598 MS.gene021407:intron 55.0%
ACAAGGGACGGCAAGGTGAT+TGG - chr1.4:12098050-12098069 MS.gene021407:CDS 55.0%
AGAGGACGGTTGACCATGGA+AGG - chr1.4:12099721-12099740 MS.gene021407:intron 55.0%
CCTCTTCTACCTCGTGTAGC+AGG + chr1.4:12096591-12096610 None:intergenic 55.0%
CCTGCTACACGAGGTAGAAG+AGG - chr1.4:12096588-12096607 MS.gene021407:intron 55.0%
CTACCTCGTGTAGCAGGTTC+GGG + chr1.4:12096585-12096604 None:intergenic 55.0%
CTGATTATGGATGCCGGCAC+TGG - chr1.4:12100026-12100045 MS.gene021407:intron 55.0%
GAAGAGAGGACGGTTGACCA+TGG - chr1.4:12099717-12099736 MS.gene021407:intron 55.0%
GGCCACTGCTGGAAGTAGAT+GGG - chr1.4:12100601-12100620 MS.gene021407:intron 55.0%
GGGAGAACCGCAGCTGATAA+AGG - chr1.4:12096786-12096805 MS.gene021407:CDS 55.0%
GGTCCGGTTGCTGAAGATGA+AGG - chr1.4:12096807-12096826 MS.gene021407:CDS 55.0%
TACTTGATCACGTGCAGCGG+CGG + chr1.4:12096649-12096668 None:intergenic 55.0%
TCGGGTTTAGCGATCGGGTT+CGG + chr1.4:12096567-12096586 None:intergenic 55.0%
TGCCCATCTACTTCCAGCAG+TGG + chr1.4:12100606-12100625 None:intergenic 55.0%
TGGCCACTGCTGGAAGTAGA+TGG - chr1.4:12100600-12100619 MS.gene021407:intron 55.0%
! CAGGTTCGGGTTTAGCGATC+GGG + chr1.4:12096572-12096591 None:intergenic 55.0%
! GCAGGTTCGGGTTTAGCGAT+CGG + chr1.4:12096573-12096592 None:intergenic 55.0%
! GTTGGTCGTCGTATTGGTGC+CGG - chr1.4:12097047-12097066 MS.gene021407:CDS 55.0%
! TCCTCTGTCCCGCACCTTTT+CGG - chr1.4:12099454-12099473 MS.gene021407:intron 55.0%
!! ATGACTGTGATAGCGGCGGT+GGG - chr1.4:12096766-12096785 MS.gene021407:CDS 55.0%
!! CCGGTGCTGTTGAGGTATGA+TGG - chr1.4:12097072-12097091 MS.gene021407:intron 55.0%
CACGCCAACGAGTTGCTGCA+TGG + chr1.4:12099015-12099034 None:intergenic 60.0%
CGGGTTTAGCGATCGGGTTC+GGG + chr1.4:12096566-12096585 None:intergenic 60.0%
GCCACAAGGTGAGACCAGTC+TGG + chr1.4:12098534-12098553 None:intergenic 60.0%
GCTACCCTGGCAAGGATACC+AGG - chr1.4:12099289-12099308 MS.gene021407:intron 60.0%
GTCACTGCTATGGCCACTGC+TGG - chr1.4:12100590-12100609 MS.gene021407:CDS 60.0%
GTGCAACAGGTTCAGGTGGG+TGG - chr1.4:12096966-12096985 MS.gene021407:CDS 60.0%
TGGACCTCCTTACGAGTGGC+AGG - chr1.4:12097901-12097920 MS.gene021407:intron 60.0%
! CGCGCCGACCTATGAAGCAA+AGG - chr1.4:12099818-12099837 MS.gene021407:intron 60.0%
!! CGATGGTAGATGGCGGGTGA+TGG - chr1.4:12097389-12097408 MS.gene021407:intron 60.0%
!! CGGCGGCGATGGTGTTGTTA+CGG + chr1.4:12096629-12096648 None:intergenic 60.0%
!! GATGACTGTGATAGCGGCGG+TGG - chr1.4:12096765-12096784 MS.gene021407:CDS 60.0%
!! GCCAGACTGGTCTCACCTTG+TGG - chr1.4:12098530-12098549 MS.gene021407:CDS 60.0%
!! TACCTCAACAGCACCGGCTC+CGG + chr1.4:12097069-12097088 None:intergenic 60.0%
AGGGTAGCCGTCCGCGAAGA+AGG + chr1.4:12099277-12099296 None:intergenic 65.0%
TTCTTCGCGGACGGCTACCC+TGG - chr1.4:12099276-12099295 MS.gene021407:intron 65.0%
TTGATCACGTGCAGCGGCGG+CGG + chr1.4:12096646-12096665 None:intergenic 65.0%
! GCCGAAAAGGTGCGGGACAG+AGG + chr1.4:12099458-12099477 None:intergenic 65.0%
!! CGTCGTATTGGTGCCGGAGC+CGG - chr1.4:12097053-12097072 MS.gene021407:CDS 65.0%
!! TGCCGGAGCCGGTGCTGTTG+AGG - chr1.4:12097064-12097083 MS.gene021407:CDS 70.0%
CGCGGACGGCTACCCTGGCA+AGG - chr1.4:12099281-12099300 MS.gene021407:intron 75.0%
! ACGTGCAGCGGCGGCGGCGA+TGG + chr1.4:12096640-12096659 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 12096507 12101083 12096507 ID=MS.gene021407
chr1.4 mRNA 12096507 12101083 12096507 ID=MS.gene021407.t1;Parent=MS.gene021407
chr1.4 exon 12100778 12101083 12100778 ID=MS.gene021407.t1.exon1;Parent=MS.gene021407.t1
chr1.4 CDS 12100778 12101083 12100778 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12100505 12100615 12100505 ID=MS.gene021407.t1.exon2;Parent=MS.gene021407.t1
chr1.4 CDS 12100505 12100615 12100505 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12099660 12099733 12099660 ID=MS.gene021407.t1.exon3;Parent=MS.gene021407.t1
chr1.4 CDS 12099660 12099733 12099660 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12099509 12099578 12099509 ID=MS.gene021407.t1.exon4;Parent=MS.gene021407.t1
chr1.4 CDS 12099509 12099578 12099509 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12099362 12099417 12099362 ID=MS.gene021407.t1.exon5;Parent=MS.gene021407.t1
chr1.4 CDS 12099362 12099417 12099362 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12099180 12099251 12099180 ID=MS.gene021407.t1.exon6;Parent=MS.gene021407.t1
chr1.4 CDS 12099180 12099251 12099180 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12098681 12098775 12098681 ID=MS.gene021407.t1.exon7;Parent=MS.gene021407.t1
chr1.4 CDS 12098681 12098775 12098681 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12098504 12098570 12098504 ID=MS.gene021407.t1.exon8;Parent=MS.gene021407.t1
chr1.4 CDS 12098504 12098570 12098504 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12098280 12098409 12098280 ID=MS.gene021407.t1.exon9;Parent=MS.gene021407.t1
chr1.4 CDS 12098280 12098409 12098280 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12097982 12098200 12097982 ID=MS.gene021407.t1.exon10;Parent=MS.gene021407.t1
chr1.4 CDS 12097982 12098200 12097982 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12097751 12097893 12097751 ID=MS.gene021407.t1.exon11;Parent=MS.gene021407.t1
chr1.4 CDS 12097751 12097893 12097751 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12097496 12097670 12097496 ID=MS.gene021407.t1.exon12;Parent=MS.gene021407.t1
chr1.4 CDS 12097496 12097670 12097496 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12097245 12097335 12097245 ID=MS.gene021407.t1.exon13;Parent=MS.gene021407.t1
chr1.4 CDS 12097245 12097335 12097245 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12096929 12097086 12096929 ID=MS.gene021407.t1.exon14;Parent=MS.gene021407.t1
chr1.4 CDS 12096929 12097086 12096929 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12096645 12096833 12096645 ID=MS.gene021407.t1.exon15;Parent=MS.gene021407.t1
chr1.4 CDS 12096645 12096833 12096645 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
chr1.4 exon 12096507 12096566 12096507 ID=MS.gene021407.t1.exon16;Parent=MS.gene021407.t1
chr1.4 CDS 12096507 12096566 12096507 ID=cds.MS.gene021407.t1;Parent=MS.gene021407.t1
Gene Sequence

>MS.gene021407

ATGCCTCCTCAACTTCGAACCAGAAAAACCAAAAATAACCCGAATCCGAATCAAAACCCGAACCCGATCGCTAAACCCGAACCTGCTACACGAGGTAGAAGAGGTAGACCTGCTAAAAACCGTAACAACACCATCGCCGCCGCCGCTGCACGTGATCAAGTACAAGAACAACAACAACAACAACAACAACAACAACAAAACGAACAACCTCACGTGCCGGAACAAATTAGGGTTTCTGATAAGCAAGAGATTATGGATGATGACTGTGATAGCGGCGGTGGGAGAACCGCAGCTGATAAAGGTCCGGTTGCTGAAGATGAAGGGAGTACACCGCCTATTCCTGAAAAAGTAATTTTTTTTCTTTCTTTTCTTTTAATTATCAATTTTTTTTTATCTGCATGGTGTTTTTTATTAATTTTTTGTGAAATTTTGATAAAAAATTTGATTTTTAAAATTTTTGTGCAACAGGTTCAGGTGGGTGGTTCACCGATGTACAGAGTAGATAGGAAGCTAGGGAAAGGAGGTTTTGGACAAGTTTATGTTGGTCGTCGTATTGGTGCCGGAGCCGGTGCTGTTGAGGTATGATGGTATCAGTGTGTTTCTTTGTGTTTGATTTTAACTTCTGATTGAAAACAGTGATGATAAAGTATTGTCTATGTGGGAATTGATATAAAATTTGAAATTGTGATAAAAATGAATTATTGATGCTTATGATTGTAAATTGATGTCGGTGTTATTGATTGGAGTTGGCGGGTTGTGTAAAAAATCCGCCATACAAGTACAGTGTTGTGGCCTATGGTGAATGTGATACAGATTGAACCTAATATCCGACGTAAAAATGAATAATTGATGCTTATGATTGAAAATTGATGTCAATGGTAACGATGGTAGATGGCGGGTGATGGAAATGATCCGCCATATAAGTATGATGTTGTGGTCTATGCTGCTGTGACTCTGACCACATTGATTGATGTTTTTATTTTGTTGAGAAAACACAACTTATGCATTTCATTCATAATCAAAGTCTGGATACATGTAGGAATATCATAAAAACTGGAGAACTAGCATTATATGTGGCCGCTTTTGCTTAAAGCTTGAGCTACCGTATTAGTTTGTCTCCTTGCAAACTCCACATGAGAGTTGGTAATAACAATTGCTTGTTTGGAATCAACCTCAAAAAGCAAGCATTGATTGATGTTAATCTGCATTGTATGTTTATCATAAATGAAGCGTAAATAAAAGAGAGATCACCGGTGCATTCTTTTTTAATGGGGTATACATAGACTAGACCTTAGTGTGTGTAATTTGCAGTGGTTTTTTGACATTGTTTGTGCAATGAATAATTTGCAGGTGGCTTTGAAATTTGAGCATAAAACCAGTAAAGGGTGTAATTATGGACCTCCTTACGAGTGGCAGGTTTACAAGTGAGTGTGGTCTATCTTTTCCTTTCAGCTCATTTATTACCATTGTATGTTGCTAAAATTATGTTTTTTGTTTGTATGTAGTGTATTAGGAGGTAGCCATGGTGTCCCACGAGTTCATTACAAGGGACGGCAAGGTGATTGGTATGTCATGGTAAGTGCTTTTTAAAGATTTTATTTTTTTATCGAGGGCTATGGGTTTTTTATCTTTCAATTTTATTTTTTAACCTGGAATTATATTGCAGGTCATGGATATTCTTGGCCCTAGTTTATGGGATGTTTGGAATAACAAGACACACACGTAAGTTCATCTCTCGTGCTGGAATCATAGTGCAATGCAACGTGTCTTGATTTTTACTGTTGGAGTAAATAATGCTTGTTTTAACTGTATTTTCTATTTTGTGGCTTTAGGATGTCTGCTGAAATGGTGTCGTGTATAGCAATCGAGGCTGTTTCCATATTAGAGAAGATGCATTCTAGAGGGTGATTCTCTTCTTCCTGATCCTGTTTTTGATTTATTTGTGGATTTTTCATTACTGCACGGATTGGATATAGCCGGCATGCTAAACCAGTCATGCTAGGCTTCTTTGGCAATTTCAGTTGCCAGACTGGTCTCACCTTGTGGCTTTCACAGTTTAACAGGCTTTCTTGCATATTTTTTTTGGGGGTGGGGGGGTTACTCTTTATACCCGTAGTGTGTGTACCTAGATTAAGCTTTTTGTGTCCTTACTAGGTCAACTCAGCTTAAATTAGTTGGGGTCTAATGTGGCTTTAGGATCCGTGGGTCTAAAACCGAAATAAAAATGCAAATCACTTGTCTGACAATATTGAGCTCATGATTCTCATTGTTGCAAAAAATGTCATTGTGTTGCTTGCATTTGTTTCAGATATGTGCATGGTGACGTAAAACCTGAGAACTTTTTGCTTGGCCCTCCGGGAACTCATGAAGAGAAAAAGCTTTTTCTGGTCGATCTTGGTTTAGGTAAGTATTCTACCTTGCCAAGAAAAGTTGGTGCTTACACTTCATTGTATTTTTTCTTCTTCTAATTTCTCTTAATTTATTTATGCAATCTGCTCTCTTTTGCCATGCAGCAACTCGTTGGCGTGATAATTCGACTGGTCTTCATGTTGATTACGATCAACGTCCAGATGTATTTAGGTAATTTATTTGCATTTCTAATTTACGGTGAATTTTCTGATCAAAATCCAGGCTTTGGTTGATTTTGATGTTGATTGCCATATTCTTGCAACAGGGGAACTGTTCGTTATGCTAGTGTACATGCTCATCTTGGTAGGACAGGTAGCAGAAGAGATGATTTGGAATCTCTTGCATACACACTAATTTTCCTTCTTCGCGGACGGCTACCCTGGCAAGGATACCAGGTCATATTTGTTTTTAATAATAACTTTAGTGATAATAGAAAATAAAAATGTTCCGTTCTAATAAAATTGTTAGCTGCAGGGTGAAAATAAAGGATTTCTTGTTTGCAAGAAGAAAATGGCCACCTCGCCAGAAAATATGTGTATCCTCTGTCCCGCACCTTTTCGGCAGTTTATTGAGTTCGTGGTGAATTTGAAGTTCGACGAAGAACCAAATTATGCCAAATATATATCACTTTTCGATGGAATTGTTGGTCCAAATCCAGACATTAGACCCATAAACACTGACGGTGCTCAGAAGGTACTAAATTCTTCAATATTTAGAGATTACTGTTTACAGATGAGGGCTGAGTCTTGTTGCTAATATTTTCCTGGTTTGTGCTGTTAAGCTTATTTATCAGGTTGGACAGAAGAGAGGACGGTTGACCATGGAAGGAGATGATGATGAGCAGCCAAAGAAGAAAGTCAGAATGGGAATGCCAGCAACACAATGGATTAGTGTGTACAATGCGCGCCGACCTATGAAGCAAAGGTTTTCTTCTGAAGTTAAATGAGTCTTTATGGCCAATGTTAAAATGATCAGAGACTAAGTTTTTTATTCTTTTTGTCCAGGTACCATTACAATGTTGCTGATATGCGGTTGTCCCAACACATCGAAAAGGGATATGAAGATGGGTTATTTATCAGTAGTGTAGGTTGTTGTTCTAACCTTTGGGCACTGATTATGGATGCCGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCATCCTTCTTCCTTCACAAGGTTGTTATTTTTTGCTTTTGTTCATTACTTAGTAATATGTCATTTATGTTAGTAATATCATGTTTATACTTCATAGTTCATATCTGATATAATGTATTCTTCACTGTATTGGAACTTGGTGCATGTTGAAGAACTAATATAACTACTTTTGTTTTTATAGGAATGGATTATGGAACAGTGGGAAAAAAATTATTACATTAGTGCCATAGCAGGATCTAATAGTGGGAGCTCGTTGGTTGTAATGTCGAAAGGTAATTCGTTAAAGCTCTATTCTTCAGGCATTTGGTATTTTGGCGACAGTAATTGACTATATTGTATTAGGTTATTTTGCATATTTTGGCTTGTAGTGTTGAGTTTAGTTCCTGTGTGACTATGTCTCTCACTTCTACTGGTGATTTGTTGGTTTCAGGGACCCAATACTTGCAGCAATCTTATAAGGTCAGTGAATCATTTCCATTCAAGTGGATTAATAAAAAATGGAAAGAAGGATTTTTCGTCACTGCTATGGCCACTGCTGGAAGTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTTCAGATCAGGTTCTACTTTTTTCTTTTTTAAAAATGTTATATTAAGTTTTTTTTAGTTGCGCTTATACCATATGTGATGTTTTCTCTTCTAAAATTAATTCCAGGTTGTGGAGCTTGATTTCCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGACAATGGTTACCGCATTACTTCAACTGCTGCTACATATGACCAGGCCGCTCTTGTTCTTAGTATTCCAAGAAGAAAACCGACTGATGAAACTCAAGAAACACTTCGCACATCTGACTTTCCTAGTACTCATGTCAAAGTAAATACCGCAGTTGATTGTGCTGTGTCCATAGTCTTCTTTAATCATGAAAGCTTATGTTTGATGTTATTTTTGCAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATTTGTTACGGAAGAACTGTTTCATGA
Protein sequence

>MS.gene021407.t1

MPPQLRTRKTKNNPNPNQNPNPIAKPEPATRGRRGRPAKNRNNTIAAAAARDQVQEQQQQQQQQQQNEQPHVPEQIRVSDKQEIMDDDCDSGGGRTAADKGPVQVGGSPMYRVDRKLGKGGFGQVYVGRRIGAGAGAVEVALKFEHKTSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGRQGDWYVMVMDILGPSLWDVWNNKTHTMSAEMVSCIAIEAVSILEKMHSRGYVHGDVKPENFLLGPPGTHEEKKLFLVDLGLATRWRDNSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPENMCILCPAPFRQFIEFVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLIYQVGQKRGRLTMEGDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIEKGYEDGLFISSVGCCSNLWALIMDAGTGFTAQVYELSSFFLHKEWIMEQWEKNYYISAIAGSNSGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWKEGFFVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATYDQAALVLSIPRRKPTDETQETLRTSDFPSTHVKEKWAKNLYIASICYGRTVS