AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022479


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022479.t1 MTR_3g074520 97.118 347 9 1 1 347 1 346 0.0 699
MS.gene022479.t1 MTR_4g478180 67.005 197 53 5 1 194 2 189 7.46e-89 271
MS.gene022479.t1 MTR_5g007370 72.956 159 39 2 1 155 1 159 1.12e-81 251
MS.gene022479.t1 MTR_5g029840 59.113 203 70 3 1 200 1 193 4.21e-81 250
MS.gene022479.t1 MTR_6g012690 77.444 133 30 0 1 133 1 133 5.70e-78 243
MS.gene022479.t1 MTR_7g011170 58.659 179 68 1 1 179 1 173 3.87e-75 234
MS.gene022479.t1 MTR_4g091490 73.881 134 34 1 1 133 1 134 4.99e-75 236
MS.gene022479.t1 MTR_2g011660 76.154 130 30 1 1 129 1 130 1.22e-74 234
MS.gene022479.t1 MTR_4g082290 59.140 186 67 2 1 183 1 180 3.68e-73 232
MS.gene022479.t1 MTR_7g076740 44.404 277 131 4 1 269 1 262 8.79e-73 228
MS.gene022479.t1 MTR_2g089620 73.282 131 35 0 1 131 1 131 1.62e-71 226
MS.gene022479.t1 MTR_4g082230 58.065 186 69 2 1 183 1 180 4.14e-71 227
MS.gene022479.t1 MTR_8g031360 73.077 130 33 2 1 128 1 130 8.70e-68 215
MS.gene022479.t1 MTR_3g461490 51.256 199 85 1 1 199 1 187 5.41e-66 211
MS.gene022479.t1 MTR_5g078140 71.094 128 37 0 1 128 1 128 2.18e-65 209
MS.gene022479.t1 MTR_4g102380 69.531 128 39 0 1 128 1 128 4.55e-65 207
MS.gene022479.t1 MTR_7g115650 74.138 116 30 0 1 116 1 116 2.97e-64 203
MS.gene022479.t1 MTR_3g065440 70.079 127 38 0 1 127 1 127 8.26e-64 205
MS.gene022479.t1 MTR_4g073420 65.625 128 44 0 1 128 1 128 1.69e-63 204
MS.gene022479.t1 MTR_7g110830 65.909 132 45 0 1 132 1 132 2.14e-62 203
MS.gene022479.t1 MTR_1g076150 72.881 118 32 0 1 118 1 118 2.54e-62 199
MS.gene022479.t1 MTR_6g009430 54.194 155 67 1 1 151 1 155 6.68e-62 201
MS.gene022479.t1 MTR_3g097450 64.122 131 47 0 1 131 1 131 7.11e-62 200
MS.gene022479.t1 MTR_1g085040 64.394 132 47 0 1 132 1 132 8.88e-62 202
MS.gene022479.t1 MTR_8g095390 63.636 132 48 0 1 132 1 132 1.25e-61 200
MS.gene022479.t1 MTR_1g100653 70.339 118 35 0 1 118 1 118 1.34e-61 199
MS.gene022479.t1 MTR_1g085640 64.394 132 47 0 1 132 1 132 1.73e-61 201
MS.gene022479.t1 MTR_5g079670 62.400 125 47 0 3 127 2 126 4.10e-60 192
MS.gene022479.t1 MTR_4g105130 64.122 131 47 0 1 131 1 131 6.62e-60 197
MS.gene022479.t1 MTR_7g096930 70.339 118 35 0 1 118 1 118 9.12e-60 194
MS.gene022479.t1 MTR_7g010210 69.828 116 35 0 1 116 1 116 1.48e-59 194
MS.gene022479.t1 MTR_7g010210 69.828 116 35 0 1 116 1 116 1.91e-59 192
MS.gene022479.t1 MTR_1g043080 70.085 117 35 0 1 117 1 117 2.63e-59 192
MS.gene022479.t1 MTR_1g043050 70.940 117 34 0 1 117 1 117 2.79e-59 192
MS.gene022479.t1 MTR_2g064160 66.116 121 41 0 6 126 5 125 5.81e-59 192
MS.gene022479.t1 MTR_3g083540 66.129 124 42 0 5 128 34 157 8.35e-59 192
MS.gene022479.t1 MTR_3g077110 59.559 136 55 0 1 136 1 136 2.39e-57 189
MS.gene022479.t1 MTR_7g111290 65.649 131 45 0 1 131 1 131 3.20e-57 190
MS.gene022479.t1 MTR_4g121460 67.241 116 38 0 1 116 1 116 5.40e-57 188
MS.gene022479.t1 MTR_2g034790 60.000 135 54 0 1 135 1 135 1.67e-56 187
MS.gene022479.t1 MTR_7g087130 65.600 125 41 1 1 123 1 125 2.11e-56 187
MS.gene022479.t1 MTR_0140s0030 67.241 116 38 0 1 116 2 117 3.49e-56 186
MS.gene022479.t1 MTR_0489s0020 67.241 116 38 0 1 116 2 117 3.49e-56 186
MS.gene022479.t1 MTR_5g042030 65.000 120 42 0 11 130 6 125 5.25e-56 184
MS.gene022479.t1 MTR_2g067420 70.000 110 33 0 2 111 4 113 5.61e-56 186
MS.gene022479.t1 MTR_1g112760 62.698 126 47 0 3 128 4 129 5.65e-56 182
MS.gene022479.t1 MTR_8g027345 68.103 116 37 0 1 116 1 116 6.09e-56 184
MS.gene022479.t1 MTR_7g117730 67.241 116 38 0 1 116 1 116 6.88e-56 183
MS.gene022479.t1 MTR_3g039990 64.706 119 42 0 1 119 2 120 8.91e-56 184
MS.gene022479.t1 MTR_2g099740 50.602 166 72 2 1 159 1 163 1.34e-55 187
MS.gene022479.t1 MTR_2g089450 64.407 118 42 0 1 118 1 118 1.53e-55 182
MS.gene022479.t1 MTR_8g017440 51.534 163 70 2 1 154 1 163 5.49e-55 183
MS.gene022479.t1 MTR_4g125520 64.706 119 42 0 1 119 1 119 6.82e-54 179
MS.gene022479.t1 MTR_5g014990 44.053 227 102 7 1 222 1 207 7.28e-54 179
MS.gene022479.t1 MTR_4g057635 60.000 130 51 1 1 129 1 130 1.74e-53 179
MS.gene022479.t1 MTR_1g017000 54.422 147 62 3 1 144 1 145 2.84e-53 176
MS.gene022479.t1 MTR_8g017540 62.393 117 44 0 1 117 47 163 6.03e-53 179
MS.gene022479.t1 MTR_6g012180 65.766 111 38 0 1 111 1 111 6.75e-53 177
MS.gene022479.t1 MTR_0251s0050 62.393 117 43 1 1 116 1 117 1.55e-52 175
MS.gene022479.t1 MTR_7g102110 61.667 120 45 1 1 119 1 120 3.21e-52 174
MS.gene022479.t1 MTR_8g017500 62.069 116 44 0 1 116 1 116 4.45e-52 176
MS.gene022479.t1 MTR_0008s0390 62.712 118 43 1 1 117 1 118 5.60e-52 173
MS.gene022479.t1 MTR_4g485530 60.000 125 49 1 3 126 2 126 7.84e-52 170
MS.gene022479.t1 MTR_8g098860 60.345 116 46 0 1 116 1 116 1.17e-51 174
MS.gene022479.t1 MTR_0008s0470 61.017 118 45 1 1 117 1 118 1.46e-51 173
MS.gene022479.t1 MTR_3g103570 56.618 136 58 1 1 135 1 136 3.30e-51 174
MS.gene022479.t1 MTR_1g017140 63.559 118 42 1 1 117 1 118 4.73e-51 173
MS.gene022479.t1 MTR_0008s0280 62.281 114 43 0 1 114 1 114 5.70e-51 169
MS.gene022479.t1 MTR_5g010020 60.909 110 43 0 1 110 1 110 1.23e-49 169
MS.gene022479.t1 MTR_2g095520 63.964 111 39 1 1 110 1 111 1.32e-49 169
MS.gene022479.t1 MTR_2g089420 60.169 118 46 1 1 118 1 117 1.99e-49 172
MS.gene022479.t1 MTR_8g017390 56.115 139 57 3 1 138 1 136 3.11e-49 172
MS.gene022479.t1 MTR_7g109320 64.655 116 41 0 1 116 1 116 1.57e-48 167
MS.gene022479.t1 MTR_6g090405 61.017 118 45 1 1 117 1 118 1.63e-48 164
MS.gene022479.t1 MTR_8g017340 58.065 124 51 1 1 123 1 124 8.85e-48 168
MS.gene022479.t1 MTR_4g097570 63.636 110 39 1 1 109 1 110 1.04e-47 163
MS.gene022479.t1 MTR_0063s0090 61.062 113 44 0 1 113 1 113 1.32e-47 160
MS.gene022479.t1 MTR_2g097910 63.810 105 38 0 12 116 20 124 2.40e-47 163
MS.gene022479.t1 MTR_4g065017 62.162 111 42 0 12 122 17 127 2.63e-47 163
MS.gene022479.t1 MTR_8g017350 58.065 124 51 1 1 123 1 124 3.78e-47 169
MS.gene022479.t1 MTR_1g100667 66.038 106 36 0 13 118 14 119 3.95e-47 161
MS.gene022479.t1 MTR_3g028740 65.138 109 38 0 8 116 18 126 5.41e-47 162
MS.gene022479.t1 MTR_4g097570 63.063 111 39 2 1 109 1 111 8.98e-47 160
MS.gene022479.t1 MTR_1g073170 61.111 108 42 0 8 115 16 123 7.92e-46 157
MS.gene022479.t1 MTR_4g128670 60.360 111 43 1 1 110 1 111 5.15e-45 157
MS.gene022479.t1 MTR_4g100720 64.423 104 37 0 12 115 13 116 3.89e-44 150
MS.gene022479.t1 MTR_3g052450 59.459 111 45 0 8 118 36 146 7.03e-44 158
MS.gene022479.t1 MTR_1g045610 58.182 110 46 0 6 115 15 124 7.64e-44 152
MS.gene022479.t1 MTR_6g055910 60.000 110 44 0 9 118 11 120 1.56e-43 152
MS.gene022479.t1 MTR_1g110460 57.391 115 49 0 8 122 22 136 2.37e-43 152
MS.gene022479.t1 MTR_1g086510 53.571 140 64 1 2 140 11 150 2.78e-43 150
MS.gene022479.t1 MTR_6g006030 55.372 121 52 1 1 119 1 121 3.06e-43 149
MS.gene022479.t1 MTR_0197s0010 56.198 121 53 0 17 137 6 126 8.09e-43 148
MS.gene022479.t1 MTR_3g052430 58.716 109 45 0 10 118 39 147 3.13e-42 154
MS.gene022479.t1 MTR_5g007300 72.727 88 24 0 1 88 53 140 3.49e-42 144
MS.gene022479.t1 MTR_8g042410 61.538 104 40 0 12 115 37 140 5.26e-42 154
MS.gene022479.t1 MTR_7g035075 58.879 107 44 0 12 118 14 120 7.89e-42 145
MS.gene022479.t1 MTR_3g011610 59.615 104 42 0 12 115 37 140 9.70e-42 152
MS.gene022479.t1 MTR_1g021230 60.577 104 41 0 12 115 57 160 1.47e-41 150
MS.gene022479.t1 MTR_5g079220 55.856 111 49 0 7 117 16 126 2.05e-41 146
MS.gene022479.t1 MTR_1g086530 50.000 134 66 1 8 140 29 162 6.13e-41 145
MS.gene022479.t1 MTR_5g079290 57.009 107 46 0 11 117 16 122 8.16e-41 144
MS.gene022479.t1 MTR_2g088170 61.682 107 41 0 9 115 26 132 1.27e-40 148
MS.gene022479.t1 MTR_5g078800 59.813 107 43 0 11 117 6 112 1.63e-40 143
MS.gene022479.t1 MTR_5g078910 58.491 106 44 0 12 117 7 112 2.21e-40 144
MS.gene022479.t1 MTR_5g079120 53.636 110 51 0 8 117 57 166 4.79e-40 143
MS.gene022479.t1 MTR_0247s0040 57.009 107 46 0 7 113 2 108 9.98e-40 139
MS.gene022479.t1 MTR_8g020490 56.897 116 46 1 1 116 1 112 1.35e-39 140
MS.gene022479.t1 MTR_7g017260 57.798 109 44 1 11 117 24 132 1.42e-39 141
MS.gene022479.t1 MTR_4g063100 56.604 106 46 0 13 118 8 113 2.67e-39 140
MS.gene022479.t1 MTR_0193s0090 54.630 108 49 0 10 117 5 112 1.08e-38 137
MS.gene022479.t1 MTR_1g062940 56.364 110 47 1 12 120 6 115 1.37e-38 137
MS.gene022479.t1 MTR_5g078860 57.944 107 45 0 11 117 6 112 1.77e-38 139
MS.gene022479.t1 MTR_2g096380 57.692 104 44 0 12 115 6 109 1.96e-38 137
MS.gene022479.t1 MTR_3g045430 47.761 134 69 1 1 133 1 134 2.24e-38 139
MS.gene022479.t1 MTR_0001s0360 56.075 107 47 0 11 117 6 112 4.10e-38 137
MS.gene022479.t1 MTR_2g033170 55.000 120 54 0 8 127 20 139 7.39e-38 138
MS.gene022479.t1 MTR_8g060940 56.863 102 44 0 11 112 6 107 1.18e-37 135
MS.gene022479.t1 MTR_5g078930 55.856 111 48 1 6 115 2 112 2.77e-37 134
MS.gene022479.t1 MTR_7g111290 68.539 89 28 0 43 131 1 89 1.97e-35 132
MS.gene022479.t1 MTR_4g123040 50.000 132 62 1 8 139 20 147 2.01e-35 131
MS.gene022479.t1 MTR_5g078950 53.398 103 48 0 11 113 6 108 2.02e-35 130
MS.gene022479.t1 MTR_5g062790 51.327 113 53 2 13 124 10 121 1.48e-34 129
MS.gene022479.t1 MTR_5g088080 50.442 113 54 2 13 124 13 124 1.54e-34 127
MS.gene022479.t1 MTR_5g088150 50.442 113 54 2 13 124 13 124 1.54e-34 127
MS.gene022479.t1 MTR_5g488210 50.442 113 54 2 13 124 13 124 1.54e-34 127
MS.gene022479.t1 MTR_5g088640 50.442 113 54 2 13 124 13 124 1.89e-34 127
MS.gene022479.t1 MTR_5g488170 50.442 113 54 2 13 124 13 124 2.85e-34 126
MS.gene022479.t1 MTR_1g083630 51.304 115 56 0 1 115 1 115 8.82e-34 131
MS.gene022479.t1 MTR_4g029540 50.962 104 50 1 12 114 10 113 1.05e-32 124
MS.gene022479.t1 MTR_8g006470 48.148 108 55 1 8 114 6 113 1.22e-32 123
MS.gene022479.t1 MTR_5g088610 48.673 113 56 2 13 124 10 121 2.56e-30 118
MS.gene022479.t1 MTR_6g055910 61.728 81 31 0 38 118 11 91 3.32e-30 116
MS.gene022479.t1 MTR_4g063100 63.158 76 28 0 43 118 9 84 4.89e-30 114
MS.gene022479.t1 MTR_4g019370 52.381 105 47 2 14 117 38 140 1.19e-29 116
MS.gene022479.t1 MTR_5g016510 48.182 110 54 2 14 122 5 112 3.75e-29 114
MS.gene022479.t1 MTR_7g061330 54.717 106 45 2 12 116 111 214 6.31e-29 117
MS.gene022479.t1 MTR_7g461410 54.717 106 45 2 12 116 111 214 6.31e-29 117
MS.gene022479.t1 MTR_7g061330 54.717 106 45 2 12 116 75 178 1.13e-28 116
MS.gene022479.t1 MTR_2g096380 64.384 73 26 0 43 115 18 90 1.28e-28 110
MS.gene022479.t1 MTR_4g128190 49.524 105 39 2 11 114 10 101 1.76e-28 110
MS.gene022479.t1 MTR_4g094982 49.057 106 45 2 14 115 5 105 4.43e-28 110
MS.gene022479.t1 MTR_6g015455 35.829 187 104 4 14 186 5 189 4.97e-28 115
MS.gene022479.t1 MTR_3g463400 46.154 117 59 3 1 115 119 233 1.21e-27 112
MS.gene022479.t1 MTR_5g070020 45.299 117 60 3 1 115 108 222 2.27e-27 110
MS.gene022479.t1 MTR_3g101290 47.059 102 53 1 14 115 37 137 5.05e-27 106
MS.gene022479.t1 MTR_5g049190 50.000 102 48 2 8 108 13 112 1.32e-26 106
MS.gene022479.t1 MTR_3g110028 47.170 106 53 2 12 116 83 186 1.85e-26 110
MS.gene022479.t1 MTR_6g074860 47.059 102 51 2 14 114 4 103 1.27e-25 103
MS.gene022479.t1 MTR_1g026870 47.170 106 53 2 12 116 83 186 2.44e-25 107
MS.gene022479.t1 MTR_1g026870 36.000 100 62 2 14 112 33 131 2.15e-14 74.7
MS.gene022479.t1 MTR_1g085880 51.429 105 49 2 12 114 11 115 3.86e-25 100
MS.gene022479.t1 MTR_5g041570 38.750 160 70 6 2 140 127 279 1.12e-24 104
MS.gene022479.t1 MTR_1g057980 46.078 102 54 1 9 110 75 175 1.68e-24 101
MS.gene022479.t1 MTR_1g085770 51.429 105 49 2 12 114 11 115 1.73e-24 102
MS.gene022479.t1 MTR_4g082040 48.544 103 50 2 14 115 105 205 1.81e-24 103
MS.gene022479.t1 MTR_4g105660 46.602 103 52 2 14 115 180 280 2.40e-24 103
MS.gene022479.t1 MTR_7g451170 44.118 102 56 1 14 115 191 291 2.42e-24 103
MS.gene022479.t1 MTR_7g037260 43.137 102 57 1 14 115 145 245 3.27e-24 102
MS.gene022479.t1 MTR_0023s0210 51.852 81 39 0 8 88 3 83 3.98e-24 94.7
MS.gene022479.t1 MTR_6g027360 50.000 100 47 2 10 108 74 171 4.99e-24 100
MS.gene022479.t1 MTR_3g077650 46.602 103 52 2 14 115 181 281 6.36e-24 102
MS.gene022479.t1 MTR_6g027340 48.958 96 46 2 14 108 16 109 2.58e-23 96.3
MS.gene022479.t1 MTR_5g010650 48.485 99 48 2 12 109 108 204 4.47e-23 100
MS.gene022479.t1 MTR_4g088015 43.564 101 56 1 14 114 221 320 5.43e-23 99.8
MS.gene022479.t1 MTR_3g089045 46.789 109 55 2 8 115 10 116 7.54e-23 97.1
MS.gene022479.t1 MTR_7g035350 45.745 94 50 1 17 110 228 320 8.60e-23 99.0
MS.gene022479.t1 MTR_6g027370 45.631 103 53 2 14 115 99 199 1.09e-22 97.8
MS.gene022479.t1 MTR_5g082910 44.860 107 55 3 8 112 12 116 1.33e-22 96.3
MS.gene022479.t1 MTR_7g450950 42.268 97 55 1 14 110 157 252 1.51e-20 91.3
MS.gene022479.t1 MTR_7g086960 43.103 116 58 3 1 115 81 189 1.80e-20 91.3
MS.gene022479.t1 MTR_7g037130 41.237 97 56 1 14 110 145 240 2.39e-20 91.3
MS.gene022479.t1 MTR_7g061550 37.624 101 61 1 17 115 10 110 7.48e-18 84.0
MS.gene022479.t1 MTR_5g038910 39.394 99 59 1 17 115 29 126 5.38e-16 79.3
MS.gene022479.t1 MTR_5g007310 39.695 131 57 4 98 223 6 119 5.66e-16 76.6
MS.gene022479.t1 MTR_5g038910 39.394 99 59 1 17 115 29 126 9.07e-16 78.2
MS.gene022479.t1 MTR_8g017480 53.846 52 24 0 1 52 1 52 2.44e-15 69.7
MS.gene022479.t1 MTR_8g468380 36.364 99 62 1 17 115 25 122 3.18e-14 73.6
MS.gene022479.t1 MTR_6g055910 61.224 49 19 0 70 118 2 50 4.73e-14 70.9
MS.gene022479.t1 MTR_4g063100 60.870 46 18 0 73 118 4 49 1.53e-13 68.9
MS.gene022479.t1 MTR_2g096380 64.286 42 15 0 74 115 5 46 1.72e-12 65.5
MS.gene022479.t1 MTR_1g008970 43.478 69 39 0 48 116 124 192 3.55e-11 63.2
MS.gene022479.t1 MTR_1g076150 75.676 37 9 0 82 118 30 66 7.14e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022479.t1 AT1G34670 51.175 383 133 12 1 347 1 365 1.64e-111 329
MS.gene022479.t1 AT5G10280 49.030 361 141 10 1 346 1 333 3.89e-102 304
MS.gene022479.t1 AT5G16770 61.353 207 64 2 1 204 1 194 1.19e-89 272
MS.gene022479.t1 AT5G16770 61.353 207 64 2 1 204 1 194 1.19e-89 272
MS.gene022479.t1 AT5G16770 61.353 207 64 2 1 204 1 194 3.91e-89 271
MS.gene022479.t1 AT5G16770 61.353 207 64 2 1 204 1 194 3.91e-89 271
MS.gene022479.t1 AT5G65230 70.899 189 48 3 1 188 1 183 4.80e-87 265
MS.gene022479.t1 AT3G02940 52.273 264 104 5 1 256 1 250 1.70e-85 261
MS.gene022479.t1 AT3G02940 52.273 264 104 5 1 256 1 250 3.92e-85 260
MS.gene022479.t1 AT3G02940 52.273 264 104 5 1 256 1 250 3.92e-85 260
MS.gene022479.t1 AT5G15310 62.431 181 61 3 1 179 1 176 6.66e-79 242
MS.gene022479.t1 AT5G15310 62.431 181 61 3 1 179 1 176 7.56e-79 244
MS.gene022479.t1 AT5G15310 62.431 181 61 3 1 179 1 176 8.32e-79 244
MS.gene022479.t1 AT4G21440 67.262 168 40 3 1 154 1 167 2.33e-78 244
MS.gene022479.t1 AT3G01140 75.556 135 33 0 1 135 1 135 1.19e-77 242
MS.gene022479.t1 AT4G05100 76.154 130 30 1 1 129 1 130 1.97e-74 233
MS.gene022479.t1 AT3G01140 75.000 132 33 0 4 135 47 178 2.14e-74 235
MS.gene022479.t1 AT4G17785 72.993 137 36 1 1 136 1 137 6.42e-74 233
MS.gene022479.t1 AT4G17785 72.993 137 36 1 1 136 1 137 8.46e-74 233
MS.gene022479.t1 AT4G28110 74.419 129 33 0 1 129 1 129 1.38e-73 229
MS.gene022479.t1 AT3G61250 75.000 128 32 0 1 128 1 128 1.40e-73 230
MS.gene022479.t1 AT5G54230 71.223 139 40 0 1 139 1 139 1.12e-68 218
MS.gene022479.t1 AT4G22680 73.438 128 34 0 1 128 1 128 8.43e-68 214
MS.gene022479.t1 AT5G60890 68.750 128 40 0 1 128 1 128 4.95e-66 210
MS.gene022479.t1 AT5G16600 71.094 128 37 0 1 128 1 128 3.43e-65 209
MS.gene022479.t1 AT1G66230 70.312 128 38 0 1 128 1 128 6.44e-65 207
MS.gene022479.t1 AT4G12350 70.312 128 38 0 1 128 1 128 1.12e-64 207
MS.gene022479.t1 AT5G61420 67.969 128 41 0 1 128 1 128 2.94e-64 208
MS.gene022479.t1 AT5G07690 68.750 128 40 0 1 128 1 128 4.81e-64 207
MS.gene022479.t1 AT1G35515 61.745 149 45 2 1 137 1 149 5.32e-64 202
MS.gene022479.t1 AT1G18570 68.750 128 39 1 1 127 1 128 5.38e-64 207
MS.gene022479.t1 AT4G09460 67.717 127 41 0 1 127 1 127 7.84e-64 203
MS.gene022479.t1 AT4G38620 66.406 128 43 0 1 128 1 128 1.70e-63 203
MS.gene022479.t1 AT1G74080 67.176 131 43 0 1 131 1 131 2.46e-63 205
MS.gene022479.t1 AT4G34990 67.188 128 42 0 1 128 1 128 2.59e-63 202
MS.gene022479.t1 AT1G22640 66.142 127 43 0 1 127 1 127 2.68e-63 202
MS.gene022479.t1 AT5G07700 57.485 167 62 2 1 167 1 158 9.22e-63 203
MS.gene022479.t1 AT5G07700 57.485 167 62 2 1 167 1 158 9.22e-63 203
MS.gene022479.t1 AT2G16720 65.354 127 44 0 1 127 1 127 1.71e-62 201
MS.gene022479.t1 AT5G26660 67.969 128 41 0 1 128 1 128 1.89e-62 203
MS.gene022479.t1 AT5G56110 53.143 175 70 1 1 175 1 163 5.48e-62 201
MS.gene022479.t1 AT3G23250 74.138 116 30 0 1 116 1 116 8.51e-62 199
MS.gene022479.t1 AT1G09540 52.542 177 77 1 1 177 1 170 1.09e-61 201
MS.gene022479.t1 AT2G31180 51.955 179 75 1 1 168 1 179 1.38e-61 197
MS.gene022479.t1 AT5G62320 64.662 133 40 1 2 127 3 135 3.63e-61 196
MS.gene022479.t1 AT1G57560 62.121 132 50 0 1 132 1 132 4.90e-61 198
MS.gene022479.t1 AT1G57560 62.595 131 49 0 1 131 1 131 9.85e-61 196
MS.gene022479.t1 AT1G06180 72.414 116 32 0 1 116 1 116 1.81e-59 192
MS.gene022479.t1 AT4G01680 62.879 132 49 0 1 132 1 132 2.66e-59 191
MS.gene022479.t1 AT3G47600 68.908 119 37 0 1 119 1 119 2.90e-59 194
MS.gene022479.t1 AT5G14340 63.158 133 49 0 1 133 13 145 3.98e-59 192
MS.gene022479.t1 AT1G74650 62.044 137 51 1 1 136 1 137 4.01e-59 194
MS.gene022479.t1 AT1G56160 70.435 115 34 0 2 116 4 118 8.32e-59 192
MS.gene022479.t1 AT3G13540 64.000 125 45 0 4 128 15 139 1.01e-58 190
MS.gene022479.t1 AT4G01680 62.879 132 49 0 1 132 1 132 1.69e-58 192
MS.gene022479.t1 AT5G62470 67.227 119 39 0 1 119 1 119 3.35e-58 192
MS.gene022479.t1 AT3G12720 65.289 121 42 0 6 126 16 136 3.70e-58 191
MS.gene022479.t1 AT1G79180 68.376 117 37 0 2 118 4 120 2.99e-57 188
MS.gene022479.t1 AT1G74430 60.294 136 54 0 1 136 1 136 7.88e-57 186
MS.gene022479.t1 AT3G28910 66.393 122 41 0 1 122 1 122 9.73e-57 187
MS.gene022479.t1 AT5G62470 67.227 119 38 1 1 119 1 118 1.56e-56 187
MS.gene022479.t1 AT1G08810 68.966 116 36 0 1 116 1 116 1.69e-56 185
MS.gene022479.t1 AT5G49330 67.241 116 38 0 1 116 1 116 7.30e-56 186
MS.gene022479.t1 AT1G16490 67.826 115 37 0 2 116 4 118 1.87e-55 182
MS.gene022479.t1 AT4G01680 57.639 144 49 1 1 132 1 144 3.14e-55 184
MS.gene022479.t1 AT3G12820 66.379 116 39 0 3 118 5 120 4.73e-55 180
MS.gene022479.t1 AT3G62610 67.241 116 38 0 1 116 1 116 2.30e-54 182
MS.gene022479.t1 AT2G47460 60.000 135 54 0 1 135 1 135 2.90e-54 182
MS.gene022479.t1 AT1G18710 60.156 128 51 0 1 128 1 128 6.18e-54 178
MS.gene022479.t1 AT3G28470 60.448 134 53 0 1 134 1 134 4.08e-53 178
MS.gene022479.t1 AT3G13890 63.248 117 43 0 1 117 1 117 4.38e-53 179
MS.gene022479.t1 AT1G63910 55.970 134 59 0 1 134 1 134 4.98e-53 179
MS.gene022479.t1 AT5G23000 61.017 118 45 1 1 117 1 118 9.33e-52 174
MS.gene022479.t1 AT5G57620 63.559 118 42 1 1 117 1 118 3.34e-51 173
MS.gene022479.t1 AT3G49690 64.407 118 41 1 1 117 1 118 5.78e-51 172
MS.gene022479.t1 AT1G79180 52.667 150 38 1 2 118 4 153 7.77e-51 172
MS.gene022479.t1 AT5G65790 62.712 118 43 1 1 117 1 118 1.04e-50 173
MS.gene022479.t1 AT2G36890 59.055 127 51 1 1 126 1 127 2.17e-50 170
MS.gene022479.t1 AT2G36890 59.055 127 51 1 1 126 42 168 4.38e-50 171
MS.gene022479.t1 AT3G13890 58.730 126 43 1 1 117 1 126 5.28e-50 171
MS.gene022479.t1 AT4G37780 58.475 118 48 1 1 117 1 118 1.07e-47 163
MS.gene022479.t1 AT3G08500 66.667 105 35 0 12 116 30 134 1.07e-46 162
MS.gene022479.t1 AT5G12870 63.889 108 39 0 12 119 18 125 3.20e-46 159
MS.gene022479.t1 AT5G14750 53.676 136 55 3 13 147 17 145 2.00e-45 154
MS.gene022479.t1 AT5G40350 58.929 112 46 0 9 120 14 125 4.62e-45 154
MS.gene022479.t1 AT3G24310 62.617 107 40 0 9 115 15 121 5.43e-45 155
MS.gene022479.t1 AT3G30210 64.423 104 37 0 11 114 26 129 3.29e-44 153
MS.gene022479.t1 AT4G13480 62.617 107 40 0 9 115 3 109 6.79e-44 152
MS.gene022479.t1 AT3G27810 59.091 110 45 0 9 118 17 126 9.77e-44 150
MS.gene022479.t1 AT5G52260 55.634 142 58 2 13 151 13 152 1.20e-43 152
MS.gene022479.t1 AT3G11440 59.813 107 43 0 9 115 38 144 1.99e-43 156
MS.gene022479.t1 AT3G01530 54.167 120 55 0 8 127 21 140 2.70e-43 149
MS.gene022479.t1 AT5G40330 57.407 108 46 0 9 116 9 116 4.59e-43 149
MS.gene022479.t1 AT5G06100 58.333 108 45 0 8 115 28 135 4.71e-43 155
MS.gene022479.t1 AT1G48000 64.078 103 37 0 12 114 32 134 6.06e-43 149
MS.gene022479.t1 AT3G11440 59.813 107 43 0 9 115 38 144 6.85e-43 156
MS.gene022479.t1 AT3G11440 59.813 107 43 0 9 115 38 144 6.85e-43 156
MS.gene022479.t1 AT3G11440 59.813 107 43 0 9 115 38 144 6.85e-43 156
MS.gene022479.t1 AT2G32460 60.000 105 42 0 11 115 5 109 8.18e-43 154
MS.gene022479.t1 AT2G32460 60.000 105 42 0 11 115 17 121 9.03e-43 155
MS.gene022479.t1 AT5G06100 58.333 108 45 0 8 115 28 135 1.67e-42 154
MS.gene022479.t1 AT5G06100 58.333 108 45 0 8 115 28 135 1.67e-42 154
MS.gene022479.t1 AT5G06100 58.333 108 45 0 8 115 28 135 1.67e-42 154
MS.gene022479.t1 AT5G06100 58.333 108 45 0 8 115 28 135 1.67e-42 154
MS.gene022479.t1 AT5G35550 57.627 118 46 1 12 129 14 127 3.02e-42 147
MS.gene022479.t1 AT3G27920 56.190 105 46 0 13 117 15 119 4.19e-42 146
MS.gene022479.t1 AT4G25560 63.208 106 39 0 13 118 11 116 9.59e-42 147
MS.gene022479.t1 AT3G48920 60.784 102 40 0 13 114 19 120 2.99e-41 145
MS.gene022479.t1 AT5G55020 58.879 107 44 0 12 118 26 132 4.78e-41 150
MS.gene022479.t1 AT2G26960 56.364 110 47 1 12 121 20 128 6.14e-41 149
MS.gene022479.t1 AT5G52600 55.752 113 47 1 6 115 3 115 8.24e-41 142
MS.gene022479.t1 AT1G66370 57.391 115 45 1 1 115 1 111 1.13e-40 143
MS.gene022479.t1 AT4G26930 58.252 103 43 0 12 114 19 121 1.84e-40 146
MS.gene022479.t1 AT5G26660 73.810 84 22 0 45 128 14 97 4.08e-40 144
MS.gene022479.t1 AT1G25340 53.913 115 53 0 13 127 19 133 5.40e-40 142
MS.gene022479.t1 AT3G53200 58.879 107 44 0 9 115 6 112 6.59e-40 141
MS.gene022479.t1 AT3G06490 53.788 132 57 1 8 139 15 142 2.24e-39 142
MS.gene022479.t1 AT2G47190 53.043 115 54 0 8 122 16 130 2.27e-39 140
MS.gene022479.t1 AT1G68320 54.955 111 50 0 12 122 19 129 5.66e-39 140
MS.gene022479.t1 AT3G46130 57.009 107 46 0 9 115 6 112 9.53e-39 139
MS.gene022479.t1 AT5G59780 57.282 103 44 0 13 115 9 111 7.48e-38 135
MS.gene022479.t1 AT1G66380 61.321 106 41 0 10 115 6 111 2.10e-37 131
MS.gene022479.t1 AT5G49620 50.000 132 62 1 8 139 22 149 3.68e-37 135
MS.gene022479.t1 AT1G56650 60.377 106 42 0 10 115 6 111 3.36e-36 132
MS.gene022479.t1 AT1G66390 60.000 105 42 0 11 115 7 111 1.93e-35 129
MS.gene022479.t1 AT1G25340 51.304 115 51 1 13 127 19 128 2.24e-35 130
MS.gene022479.t1 AT1G25340 51.304 115 51 1 13 127 19 128 4.43e-35 130
MS.gene022479.t1 AT3G60460 52.885 104 48 1 12 114 11 114 7.61e-35 129
MS.gene022479.t1 AT3G47600 72.000 75 21 0 45 119 39 113 3.14e-34 128
MS.gene022479.t1 AT3G12820 73.239 71 19 0 48 118 2 72 9.84e-34 123
MS.gene022479.t1 AT5G49620 45.205 146 62 2 8 139 22 163 1.56e-33 126
MS.gene022479.t1 AT5G14750 54.545 110 39 4 39 147 12 111 3.71e-32 119
MS.gene022479.t1 AT2G26950 51.000 100 49 0 12 111 16 115 4.02e-32 124
MS.gene022479.t1 AT5G40350 64.474 76 27 0 45 120 5 80 2.88e-31 116
MS.gene022479.t1 AT5G35550 65.385 78 27 0 39 116 44 121 4.47e-31 118
MS.gene022479.t1 AT3G27810 63.514 74 27 0 45 118 4 77 1.09e-29 112
MS.gene022479.t1 AT1G22640 66.667 69 23 0 59 127 2 70 1.73e-29 112
MS.gene022479.t1 AT3G53200 69.014 71 22 0 45 115 9 79 1.74e-29 112
MS.gene022479.t1 AT3G46130 65.278 72 25 0 44 115 9 80 7.14e-29 111
MS.gene022479.t1 AT5G59780 66.197 71 24 0 45 115 20 90 8.50e-29 111
MS.gene022479.t1 AT3G46130 66.197 71 24 0 45 115 20 90 1.44e-28 111
MS.gene022479.t1 AT4G37260 52.427 103 46 2 14 115 13 113 1.69e-28 113
MS.gene022479.t1 AT5G02320 51.887 106 48 2 12 116 125 228 4.89e-28 115
MS.gene022479.t1 AT5G02320 51.887 106 48 2 12 116 125 228 4.89e-28 115
MS.gene022479.t1 AT5G02320 51.887 106 48 2 12 116 65 168 5.84e-28 114
MS.gene022479.t1 AT2G39880 50.943 106 43 2 14 115 50 150 6.88e-28 112
MS.gene022479.t1 AT1G18960 45.669 127 62 4 10 134 6 127 7.10e-28 111
MS.gene022479.t1 AT5G58850 49.524 105 50 2 12 115 103 205 2.48e-27 111
MS.gene022479.t1 AT3G09230 47.273 110 49 2 14 119 55 159 2.61e-27 111
MS.gene022479.t1 AT1G66380 67.123 73 24 0 43 115 6 78 4.42e-27 103
MS.gene022479.t1 AT2G23290 51.456 103 47 2 14 115 13 113 5.31e-27 108
MS.gene022479.t1 AT3G09370 51.429 105 48 2 12 115 133 235 5.32e-27 111
MS.gene022479.t1 AT3G09370 51.429 105 48 2 12 115 128 230 5.52e-27 111
MS.gene022479.t1 AT3G09370 51.429 105 48 2 12 115 141 243 5.87e-27 111
MS.gene022479.t1 AT1G71030 52.222 90 42 1 38 127 7 95 6.13e-27 105
MS.gene022479.t1 AT1G71030 55.844 77 34 0 51 127 5 81 6.62e-27 105
MS.gene022479.t1 AT5G67300 49.515 103 49 2 14 115 6 106 1.12e-26 107
MS.gene022479.t1 AT1G17950 29.921 254 143 9 14 255 5 235 1.22e-26 106
MS.gene022479.t1 AT5G40360 45.714 105 55 2 12 116 156 258 1.52e-26 108
MS.gene022479.t1 AT3G50060 48.544 103 50 2 14 115 6 106 1.62e-26 107
MS.gene022479.t1 AT5G11050 47.573 103 51 2 14 115 105 205 3.73e-26 108
MS.gene022479.t1 AT4G18770 39.716 141 79 4 9 149 212 346 1.02e-25 107
MS.gene022479.t1 AT3G55730 46.364 110 50 2 14 119 56 160 2.09e-25 105
MS.gene022479.t1 AT3G27785 43.925 107 59 1 9 115 184 289 2.20e-25 106
MS.gene022479.t1 AT4G32730 46.226 106 54 2 12 116 85 188 2.57e-25 107
MS.gene022479.t1 AT4G32730 36.000 100 62 2 14 112 35 133 2.86e-14 74.7
MS.gene022479.t1 AT4G32730 46.226 106 54 2 12 116 85 188 2.57e-25 107
MS.gene022479.t1 AT4G32730 36.000 100 62 2 14 112 35 133 2.86e-14 74.7
MS.gene022479.t1 AT4G32730 46.226 106 54 2 12 116 85 188 2.57e-25 107
MS.gene022479.t1 AT4G32730 36.000 100 62 2 14 112 35 133 2.86e-14 74.7
MS.gene022479.t1 AT4G32730 46.226 106 54 2 12 116 85 188 2.57e-25 107
MS.gene022479.t1 AT4G32730 36.000 100 62 2 14 112 35 133 2.86e-14 74.7
MS.gene022479.t1 AT4G32730 46.226 106 54 2 12 116 85 188 2.61e-25 107
MS.gene022479.t1 AT4G32730 36.000 100 62 2 14 112 35 133 2.75e-14 74.3
MS.gene022479.t1 AT1G69560 39.394 132 74 3 9 139 118 244 4.12e-25 104
MS.gene022479.t1 AT1G69560 39.394 132 74 3 9 139 102 228 4.16e-25 103
MS.gene022479.t1 AT3G23250 74.138 58 15 0 59 116 2 59 5.65e-25 101
MS.gene022479.t1 AT5G11510 44.762 105 57 1 12 116 79 182 1.13e-24 105
MS.gene022479.t1 AT5G11510 32.000 100 66 2 14 112 29 127 4.29e-11 64.7
MS.gene022479.t1 AT5G11510 44.762 105 57 1 12 116 79 182 1.13e-24 105
MS.gene022479.t1 AT5G11510 32.000 100 66 2 14 112 29 127 4.29e-11 64.7
MS.gene022479.t1 AT5G11510 44.762 105 57 1 12 116 79 182 1.13e-24 105
MS.gene022479.t1 AT5G11510 32.000 100 66 2 14 112 29 127 4.29e-11 64.7
MS.gene022479.t1 AT5G11510 44.762 105 57 1 12 116 79 182 1.31e-24 105
MS.gene022479.t1 AT5G11510 32.000 100 66 2 14 112 29 127 3.63e-11 65.1
MS.gene022479.t1 AT5G11510 44.762 105 57 1 12 116 79 182 1.38e-24 105
MS.gene022479.t1 AT5G11510 32.000 100 66 2 14 112 29 127 3.68e-11 64.7
MS.gene022479.t1 AT1G73410 33.468 248 139 9 14 255 6 233 1.10e-23 98.2
MS.gene022479.t1 AT1G26780 46.667 105 53 2 12 115 96 198 1.26e-23 99.0
MS.gene022479.t1 AT1G26780 46.667 105 53 2 12 115 96 198 1.66e-23 100
MS.gene022479.t1 AT1G66380 50.000 98 48 1 11 107 7 104 2.23e-23 93.6
MS.gene022479.t1 AT5G14750 52.222 90 35 3 59 147 2 84 5.89e-23 93.6
MS.gene022479.t1 AT5G14750 52.222 90 35 3 59 147 2 84 5.89e-23 93.6
MS.gene022479.t1 AT1G73410 48.113 106 52 2 14 118 6 109 6.16e-23 95.1
MS.gene022479.t1 AT2G25230 42.857 112 61 2 4 114 16 125 3.31e-22 94.0
MS.gene022479.t1 AT4G33450 40.351 114 60 3 3 115 13 119 3.42e-22 94.4
MS.gene022479.t1 AT3G29020 38.710 124 69 2 14 131 65 187 2.04e-21 92.0
MS.gene022479.t1 AT5G17800 44.118 102 56 1 14 115 93 193 3.22e-21 93.2
MS.gene022479.t1 AT3G29020 38.710 124 69 2 14 131 67 189 1.01e-20 91.3
MS.gene022479.t1 AT5G15310 46.316 95 44 3 88 180 9 98 4.17e-19 85.9
MS.gene022479.t1 AT4G00540 42.857 112 58 3 12 119 101 210 9.21e-19 87.0
MS.gene022479.t1 AT5G61420 70.833 48 14 0 81 128 2 49 1.78e-18 84.7
MS.gene022479.t1 AT4G00540 42.857 112 58 3 12 119 99 208 1.81e-18 86.3
MS.gene022479.t1 AT5G40430 36.036 111 69 1 4 114 44 152 1.54e-17 81.6
MS.gene022479.t1 AT2G37630 37.624 101 61 1 17 115 7 107 1.13e-16 80.5
MS.gene022479.t1 AT1G74650 55.000 60 26 1 78 136 2 61 2.84e-16 77.8
MS.gene022479.t1 AT1G14350 39.394 99 59 1 17 115 28 125 3.51e-16 79.7
MS.gene022479.t1 AT1G14350 39.394 99 59 1 17 115 28 125 3.51e-16 79.7
MS.gene022479.t1 AT4G28110 69.048 42 13 0 88 129 4 45 7.80e-16 75.5
MS.gene022479.t1 AT4G25560 70.833 48 14 0 71 118 3 50 9.95e-16 75.5
MS.gene022479.t1 AT2G02820 38.384 99 60 1 17 115 33 130 1.01e-15 77.4
MS.gene022479.t1 AT2G02820 38.384 99 60 1 17 115 33 130 1.10e-15 78.2
MS.gene022479.t1 AT2G02820 38.384 99 60 1 17 115 33 130 1.11e-15 78.2
MS.gene022479.t1 AT5G39700 40.625 96 56 1 15 110 57 151 4.98e-15 73.2
MS.gene022479.t1 AT3G28910 62.000 50 17 1 78 127 2 49 5.65e-14 71.2
MS.gene022479.t1 AT5G59780 62.791 43 16 0 73 115 4 46 2.33e-13 67.8
MS.gene022479.t1 AT3G46130 62.791 43 16 0 73 115 4 46 3.76e-13 67.8
MS.gene022479.t1 AT1G22640 65.000 40 14 0 88 127 16 55 3.91e-13 67.8
MS.gene022479.t1 AT5G14340 58.696 46 19 0 88 133 10 55 7.57e-13 66.6
MS.gene022479.t1 AT1G74430 51.852 54 26 0 77 130 8 61 1.50e-12 66.2
MS.gene022479.t1 AT1G74650 52.727 55 25 1 83 136 2 56 1.26e-11 64.3
MS.gene022479.t1 AT3G18100 33.333 96 63 1 13 108 497 591 2.40e-11 65.5
MS.gene022479.t1 AT3G18100 33.333 96 63 1 13 108 545 639 2.52e-11 65.5
MS.gene022479.t1 AT3G18100 33.333 96 63 1 13 108 384 478 3.24e-11 65.1
MS.gene022479.t1 AT3G18100 33.333 96 63 1 13 108 332 426 3.47e-11 64.7

Find 76 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATGAGATAAAGAATTTC+TGG 0.217847 3.2:+67085272 MS.gene022479:CDS
TAAGGTGGACCAATTATTTA+AGG 0.230486 3.2:+67084765 MS.gene022479:CDS
AATATCAGGCCTTAAATAAT+TGG 0.239292 3.2:-67084774 None:intergenic
AGCAAACATGACAGAACTTA+TGG 0.291406 3.2:+67085396 MS.gene022479:CDS
GAGTCCAAGGTCCTTTCTTT+AGG 0.299866 3.2:-67084542 None:intergenic
TAAGATAAATCATGCATAAT+GGG 0.300700 3.2:-67085991 None:intergenic
TTGTTCCATGTTTGTGATCA+TGG 0.305258 3.2:-67085578 None:intergenic
CTTCATCTTCATTCAATCCT+TGG 0.313241 3.2:+67084836 MS.gene022479:CDS
ATCTCATTATCTGTTCTTCC+AGG 0.321841 3.2:-67085259 None:intergenic
GACCCTCTCCAGTATCTTAT+TGG 0.336984 3.2:+67085947 MS.gene022479:CDS
GCATTTAGAGGAACAGATAT+TGG 0.337009 3.2:-67085865 None:intergenic
GATTGTGTTTAATAAACTTA+AGG 0.341619 3.2:-67085608 None:intergenic
TGTTTGTGATCATGGCATTT+TGG 0.355569 3.2:-67085570 None:intergenic
TTAAGATAAATCATGCATAA+TGG 0.364715 3.2:-67085992 None:intergenic
ATAGATGTGGTAAGAGTTGT+AGG 0.378368 3.2:+67084741 MS.gene022479:CDS
ATTGTGTTTAATAAACTTAA+GGG 0.382518 3.2:-67085607 None:intergenic
TGTGAAAGAGAACATAATAA+TGG 0.389720 3.2:+67085636 MS.gene022479:CDS
GTGGAAACAAGATCAGTTCT+TGG 0.391507 3.2:-67085352 None:intergenic
ATATACAAACCAGCTAGCTT+AGG 0.400759 3.2:-67084630 None:intergenic
GTTCTTGGTTGATGAGTCAT+TGG 0.401091 3.2:-67085337 None:intergenic
TTTGCTAAAGCTAGTAGATA+TGG 0.401581 3.2:-67085379 None:intergenic
TTCATCAACTGTTGCAAAGT+TGG 0.405862 3.2:-67085809 None:intergenic
AGTTCAGACCAATAAGATAC+TGG 0.423026 3.2:-67085955 None:intergenic
AATAATGGACTGTTCACAAC+TGG 0.429961 3.2:+67085651 MS.gene022479:CDS
ATCTGTTCCTCTAAATGCTA+TGG 0.430587 3.2:+67085870 MS.gene022479:CDS
GAAATCCCCATAGCATTTAG+AGG 0.431719 3.2:-67085877 None:intergenic
AAGATTGGAGTAAATATTGA+AGG 0.443048 3.2:-67085510 None:intergenic
AGCAACATGGCCATGGAAGT+TGG 0.453352 3.2:+67084598 MS.gene022479:CDS
TTATAGAAGAATTTGAAGAT+TGG 0.453453 3.2:-67085525 None:intergenic
TATACAAACCAGCTAGCTTA+GGG 0.459441 3.2:-67084629 None:intergenic
TCTGTTCCTCTAAATGCTAT+GGG 0.463500 3.2:+67085871 MS.gene022479:CDS
ATGAAAAGTACTTGTTTCCA+AGG 0.465521 3.2:-67084853 None:intergenic
TGATCTTCTTCAGGAGTCCA+AGG 0.474736 3.2:-67084555 None:intergenic
AGCAGCTGCACTTCTAGCTA+TGG 0.500161 3.2:+67085913 MS.gene022479:CDS
TCTAGCTATGGAGGAGGAGG+AGG 0.506389 3.2:+67085925 MS.gene022479:CDS
ACAGATATTGGAGCAGAAGA+TGG 0.509435 3.2:-67085853 None:intergenic
AGCACACTTTGGTGGTGGAG+TGG 0.513813 3.2:-67085703 None:intergenic
AGAGCACTCCCTAAGCTAGC+TGG 0.515419 3.2:+67084621 MS.gene022479:CDS
ATCATCATAATCAGTCATCA+TGG 0.518139 3.2:+67085419 MS.gene022479:CDS
GTGGTAAGAGTTGTAGGCTA+AGG 0.531197 3.2:+67084747 MS.gene022479:CDS
GATGAGAGTGGCCTAAAGAA+AGG 0.535518 3.2:+67084531 MS.gene022479:CDS
GCAATTGCCACACATCTACC+TGG 0.544495 3.2:+67085241 MS.gene022479:CDS
AATGCTATGGGGATTTCAGC+AGG 0.548148 3.2:+67085883 MS.gene022479:CDS
TAAAGCTAGTAGATATGGTA+TGG 0.550765 3.2:-67085374 None:intergenic
GTAAGAGTTGTAGGCTAAGG+TGG 0.552172 3.2:+67084750 MS.gene022479:CDS
AAAAGTGGGGTAGCACACTT+TGG 0.555610 3.2:-67085714 None:intergenic
GGGGTAGCACACTTTGGTGG+TGG 0.564100 3.2:-67085708 None:intergenic
TTTGCAGGTCTTAATAGATG+TGG 0.566002 3.2:+67084728 MS.gene022479:intron
ACTTCTAGCTATGGAGGAGG+AGG 0.567377 3.2:+67085922 MS.gene022479:CDS
TTAAGGCCTGATATTAAGAG+AGG 0.570407 3.2:+67084782 MS.gene022479:CDS
AGGCCACTCTCATCACAACA+TGG 0.571440 3.2:-67084522 None:intergenic
TGCACTTCTAGCTATGGAGG+AGG 0.572187 3.2:+67085919 MS.gene022479:CDS
CAGTTGATGAAACATCATCA+TGG 0.575439 3.2:+67085821 MS.gene022479:CDS
CACATTCAGCAACATGGCCA+TGG 0.584236 3.2:+67084591 MS.gene022479:CDS
GGAGTGCTCTCCAACTTCCA+TGG 0.591428 3.2:-67084608 None:intergenic
TCATCATAATCAGTCATCAT+GGG 0.591481 3.2:+67085420 MS.gene022479:CDS
TTGAATAATGAACAAAGTCA+AGG 0.593810 3.2:+67085775 MS.gene022479:CDS
GTGGAGTGGTTGAGAAAATG+AGG 0.597647 3.2:-67085689 None:intergenic
AGCTGCACTTCTAGCTATGG+AGG 0.598375 3.2:+67085916 MS.gene022479:CDS
GGCCACTCTCATCACAACAT+GGG 0.598870 3.2:-67084521 None:intergenic
AACTGAAAGAGACTTGTTGT+GGG 0.601545 3.2:-67085741 None:intergenic
GTTGAACACATTCAGCAACA+TGG 0.604570 3.2:+67084585 MS.gene022479:CDS
GTGGCCTAAAGAAAGGACCT+TGG 0.604603 3.2:+67084538 MS.gene022479:CDS
ATTAGTAACATAAAATGGGA+AGG 0.608632 3.2:+67084496 None:intergenic
AGTGGGGTAGCACACTTTGG+TGG 0.613172 3.2:-67085711 None:intergenic
AGCTAGTAGATATGGTATGG+TGG 0.620436 3.2:-67085371 None:intergenic
AAGATAAATCATGCATAATG+GGG 0.630533 3.2:-67085990 None:intergenic
AAATGCCATGATCACAAACA+TGG 0.631165 3.2:+67085573 MS.gene022479:CDS
GACCAATAAGATACTGGAGA+GGG 0.637113 3.2:-67085949 None:intergenic
GCCACTCTCATCACAACATG+GGG 0.657364 3.2:-67084520 None:intergenic
GAACTGAAAGAGACTTGTTG+TGG 0.658874 3.2:-67085742 None:intergenic
CTGTTCCTCTAAATGCTATG+GGG 0.667441 3.2:+67085872 MS.gene022479:CDS
AGACCAATAAGATACTGGAG+AGG 0.671942 3.2:-67085950 None:intergenic
AATAATGAACAAAGTCAAGG+TGG 0.687399 3.2:+67085778 MS.gene022479:CDS
TGTTCTTCCAGGTAGATGTG+TGG 0.695449 3.2:-67085248 None:intergenic
TCCCCATGTTGTGATGAGAG+TGG 0.715025 3.2:+67084519 MS.gene022479:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATATAACTATTAATATA+TGG + chr3.2:67084655-67084674 MS.gene022479:intron 10.0%
!! TACAAAAAAAATTAAAGTTA+TGG - chr3.2:67084880-67084899 None:intergenic 10.0%
!! TTAACAAAAAAAAAAAAAGA+AGG - chr3.2:67084973-67084992 None:intergenic 10.0%
!! AAGAAAAAAAAATAAGAATG+AGG - chr3.2:67084703-67084722 None:intergenic 15.0%
!! ATTGTGTTTAATAAACTTAA+GGG - chr3.2:67085610-67085629 None:intergenic 15.0%
!! TTATTAGTAGAAATTAAAGA+TGG + chr3.2:67085122-67085141 MS.gene022479:intron 15.0%
!!! CAACTTGTTTTAAAAATTTA+CGG - chr3.2:67085100-67085119 None:intergenic 15.0%
!! ATAATGAGATAAAGAATTTC+TGG + chr3.2:67085272-67085291 MS.gene022479:CDS 20.0%
!! GATTGTGTTTAATAAACTTA+AGG - chr3.2:67085611-67085630 None:intergenic 20.0%
!! TAAGATAAATCATGCATAAT+GGG - chr3.2:67085994-67086013 None:intergenic 20.0%
!! TTAAGATAAATCATGCATAA+TGG - chr3.2:67085995-67086014 None:intergenic 20.0%
!! TTATAGAAGAATTTGAAGAT+TGG - chr3.2:67085528-67085547 None:intergenic 20.0%
!!! TAAACAAGTTGAATTTTCAA+CGG - chr3.2:67085074-67085093 None:intergenic 20.0%
! AAGATAAATCATGCATAATG+GGG - chr3.2:67085993-67086012 None:intergenic 25.0%
! AAGATTGGAGTAAATATTGA+AGG - chr3.2:67085513-67085532 None:intergenic 25.0%
! AATATCAGGCCTTAAATAAT+TGG - chr3.2:67084777-67084796 None:intergenic 25.0%
! TATCTTTGGTTATATTTGCT+AGG - chr3.2:67084911-67084930 None:intergenic 25.0%
! TGTGAAAGAGAACATAATAA+TGG + chr3.2:67085636-67085655 MS.gene022479:CDS 25.0%
! TTGAATAATGAACAAAGTCA+AGG + chr3.2:67085775-67085794 MS.gene022479:CDS 25.0%
!! AAGAAAAAGTTGATTCAGAT+GGG + chr3.2:67085307-67085326 MS.gene022479:CDS 25.0%
!! AATTTTCCTCTCTTAATATC+AGG - chr3.2:67084791-67084810 None:intergenic 25.0%
!!! GTTTTAAGACTTGATATCTT+TGG - chr3.2:67084925-67084944 None:intergenic 25.0%
!!! TTTTTTTCTTGCAATTTTGC+AGG + chr3.2:67084713-67084732 MS.gene022479:intron 25.0%
AATAATGAACAAAGTCAAGG+TGG + chr3.2:67085778-67085797 MS.gene022479:CDS 30.0%
ATCATCATAATCAGTCATCA+TGG + chr3.2:67085419-67085438 MS.gene022479:CDS 30.0%
TAAAGCTAGTAGATATGGTA+TGG - chr3.2:67085377-67085396 None:intergenic 30.0%
TAAGGTGGACCAATTATTTA+AGG + chr3.2:67084765-67084784 MS.gene022479:CDS 30.0%
TCATCATAATCAGTCATCAT+GGG + chr3.2:67085420-67085439 MS.gene022479:CDS 30.0%
TTTGCTAAAGCTAGTAGATA+TGG - chr3.2:67085382-67085401 None:intergenic 30.0%
! AGGAAAATTTTCTCAAGAAG+AGG + chr3.2:67084802-67084821 MS.gene022479:CDS 30.0%
! GAAGAAAAAGTTGATTCAGA+TGG + chr3.2:67085306-67085325 MS.gene022479:CDS 30.0%
!! ATGAAAAGTACTTGTTTCCA+AGG - chr3.2:67084856-67084875 None:intergenic 30.0%
!!! TTGGTCTGAACTTTTTTTTG+AGG + chr3.2:67085966-67085985 MS.gene022479:CDS 30.0%
AAATGCCATGATCACAAACA+TGG + chr3.2:67085573-67085592 MS.gene022479:CDS 35.0%
AATTGCTGACCATCTGTTAA+AGG - chr3.2:67085227-67085246 None:intergenic 35.0%
AGCAAACATGACAGAACTTA+TGG + chr3.2:67085396-67085415 MS.gene022479:CDS 35.0%
AGTTCAGACCAATAAGATAC+TGG - chr3.2:67085958-67085977 None:intergenic 35.0%
ATAGATGTGGTAAGAGTTGT+AGG + chr3.2:67084741-67084760 MS.gene022479:CDS 35.0%
ATCTCATTATCTGTTCTTCC+AGG - chr3.2:67085262-67085281 None:intergenic 35.0%
ATCTGTTCCTCTAAATGCTA+TGG + chr3.2:67085870-67085889 MS.gene022479:CDS 35.0%
CTATATGCACCTTTAACAGA+TGG + chr3.2:67085215-67085234 MS.gene022479:intron 35.0%
CTTCATCTTCATTCAATCCT+TGG + chr3.2:67084836-67084855 MS.gene022479:CDS 35.0%
GCATTTAGAGGAACAGATAT+TGG - chr3.2:67085868-67085887 None:intergenic 35.0%
TCTGTTCCTCTAAATGCTAT+GGG + chr3.2:67085871-67085890 MS.gene022479:CDS 35.0%
TTAAGGCCTGATATTAAGAG+AGG + chr3.2:67084782-67084801 MS.gene022479:CDS 35.0%
TTCATCAACTGTTGCAAAGT+TGG - chr3.2:67085812-67085831 None:intergenic 35.0%
TTGTTCCATGTTTGTGATCA+TGG - chr3.2:67085581-67085600 None:intergenic 35.0%
TTGTTGTGGGTCTAAAAAGT+GGG - chr3.2:67085731-67085750 None:intergenic 35.0%
TTTGCAGGTCTTAATAGATG+TGG + chr3.2:67084728-67084747 MS.gene022479:intron 35.0%
! ACAAGCTTTTGATCTTCTTC+AGG - chr3.2:67084567-67084586 None:intergenic 35.0%
! ATATACAAACCAGCTAGCTT+AGG - chr3.2:67084633-67084652 None:intergenic 35.0%
! TATACAAACCAGCTAGCTTA+GGG - chr3.2:67084632-67084651 None:intergenic 35.0%
! TGTTTGTGATCATGGCATTT+TGG - chr3.2:67085573-67085592 None:intergenic 35.0%
!! AACTGAAAGAGACTTGTTGT+GGG - chr3.2:67085744-67085763 None:intergenic 35.0%
!! AATAATGGACTGTTCACAAC+TGG + chr3.2:67085651-67085670 MS.gene022479:CDS 35.0%
!! CAGTTGATGAAACATCATCA+TGG + chr3.2:67085821-67085840 MS.gene022479:CDS 35.0%
ACAGATATTGGAGCAGAAGA+TGG - chr3.2:67085856-67085875 None:intergenic 40.0%
AGACCAATAAGATACTGGAG+AGG - chr3.2:67085953-67085972 None:intergenic 40.0%
AGCTAGTAGATATGGTATGG+TGG - chr3.2:67085374-67085393 None:intergenic 40.0%
CTGTTCCTCTAAATGCTATG+GGG + chr3.2:67085872-67085891 MS.gene022479:CDS 40.0%
GAAATCCCCATAGCATTTAG+AGG - chr3.2:67085880-67085899 None:intergenic 40.0%
GACCAATAAGATACTGGAGA+GGG - chr3.2:67085952-67085971 None:intergenic 40.0%
GTGGAAACAAGATCAGTTCT+TGG - chr3.2:67085355-67085374 None:intergenic 40.0%
GTTGAACACATTCAGCAACA+TGG + chr3.2:67084585-67084604 MS.gene022479:CDS 40.0%
TGTTGTGGGTCTAAAAAGTG+GGG - chr3.2:67085730-67085749 None:intergenic 40.0%
! CTTGTTGTGGGTCTAAAAAG+TGG - chr3.2:67085732-67085751 None:intergenic 40.0%
!! GAACTGAAAGAGACTTGTTG+TGG - chr3.2:67085745-67085764 None:intergenic 40.0%
!! GATCATGGCATTTTGGTCAT+AGG - chr3.2:67085566-67085585 None:intergenic 40.0%
!! GTTCTTGGTTGATGAGTCAT+TGG - chr3.2:67085340-67085359 None:intergenic 40.0%
AAAAGTGGGGTAGCACACTT+TGG - chr3.2:67085717-67085736 None:intergenic 45.0%
AATGCTATGGGGATTTCAGC+AGG + chr3.2:67085883-67085902 MS.gene022479:CDS 45.0%
GACCCTCTCCAGTATCTTAT+TGG + chr3.2:67085947-67085966 MS.gene022479:CDS 45.0%
GAGTCCAAGGTCCTTTCTTT+AGG - chr3.2:67084545-67084564 None:intergenic 45.0%
GATGAGAGTGGCCTAAAGAA+AGG + chr3.2:67084531-67084550 MS.gene022479:CDS 45.0%
GTAAGAGTTGTAGGCTAAGG+TGG + chr3.2:67084750-67084769 MS.gene022479:CDS 45.0%
GTGGAGTGGTTGAGAAAATG+AGG - chr3.2:67085692-67085711 None:intergenic 45.0%
GTGGTAAGAGTTGTAGGCTA+AGG + chr3.2:67084747-67084766 MS.gene022479:CDS 45.0%
TGATCTTCTTCAGGAGTCCA+AGG - chr3.2:67084558-67084577 None:intergenic 45.0%
TGTTCTTCCAGGTAGATGTG+TGG - chr3.2:67085251-67085270 None:intergenic 45.0%
AGCAACATGGCCATGGAAGT+TGG + chr3.2:67084598-67084617 MS.gene022479:CDS 50.0%
AGGCCACTCTCATCACAACA+TGG - chr3.2:67084525-67084544 None:intergenic 50.0%
CACATTCAGCAACATGGCCA+TGG + chr3.2:67084591-67084610 MS.gene022479:CDS 50.0%
GCAATTGCCACACATCTACC+TGG + chr3.2:67085241-67085260 MS.gene022479:CDS 50.0%
GCCACTCTCATCACAACATG+GGG - chr3.2:67084523-67084542 None:intergenic 50.0%
GGCCACTCTCATCACAACAT+GGG - chr3.2:67084524-67084543 None:intergenic 50.0%
GTGGCCTAAAGAAAGGACCT+TGG + chr3.2:67084538-67084557 MS.gene022479:CDS 50.0%
TCCCCATGTTGTGATGAGAG+TGG + chr3.2:67084519-67084538 MS.gene022479:CDS 50.0%
! ACTTCTAGCTATGGAGGAGG+AGG + chr3.2:67085922-67085941 MS.gene022479:CDS 50.0%
! AGCAGCTGCACTTCTAGCTA+TGG + chr3.2:67085913-67085932 MS.gene022479:CDS 50.0%
! AGCTGCACTTCTAGCTATGG+AGG + chr3.2:67085916-67085935 MS.gene022479:CDS 50.0%
! TGCACTTCTAGCTATGGAGG+AGG + chr3.2:67085919-67085938 MS.gene022479:CDS 50.0%
AGTGGGGTAGCACACTTTGG+TGG - chr3.2:67085714-67085733 None:intergenic 55.0%
TCTAGCTATGGAGGAGGAGG+AGG + chr3.2:67085925-67085944 MS.gene022479:CDS 55.0%
! AGAGCACTCCCTAAGCTAGC+TGG + chr3.2:67084621-67084640 MS.gene022479:CDS 55.0%
! GGAGTGCTCTCCAACTTCCA+TGG - chr3.2:67084611-67084630 None:intergenic 55.0%
!! AGCACACTTTGGTGGTGGAG+TGG - chr3.2:67085706-67085725 None:intergenic 55.0%
GGGGTAGCACACTTTGGTGG+TGG - chr3.2:67085711-67085730 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 67084510 67086014 67084510 ID=MS.gene022479
chr3.2 mRNA 67084510 67086014 67084510 ID=MS.gene022479.t1;Parent=MS.gene022479
chr3.2 exon 67084510 67084642 67084510 ID=MS.gene022479.t1.exon1;Parent=MS.gene022479.t1
chr3.2 CDS 67084510 67084642 67084510 ID=cds.MS.gene022479.t1;Parent=MS.gene022479.t1
chr3.2 exon 67084735 67084864 67084735 ID=MS.gene022479.t1.exon2;Parent=MS.gene022479.t1
chr3.2 CDS 67084735 67084864 67084735 ID=cds.MS.gene022479.t1;Parent=MS.gene022479.t1
chr3.2 exon 67085234 67086014 67085234 ID=MS.gene022479.t1.exon3;Parent=MS.gene022479.t1
chr3.2 CDS 67085234 67086014 67085234 ID=cds.MS.gene022479.t1;Parent=MS.gene022479.t1
Gene Sequence

>MS.gene022479

ATGGGAAGGTCCCCATGTTGTGATGAGAGTGGCCTAAAGAAAGGACCTTGGACTCCTGAAGAAGATCAAAAGCTTGTTGAACACATTCAGCAACATGGCCATGGAAGTTGGAGAGCACTCCCTAAGCTAGCTGGTTTGTATATTTATCATATAACTATTAATATATGGTTTCTCTTTTTACTTGATAACTCCTCATTCTTATTTTTTTTTCTTGCAATTTTGCAGGTCTTAATAGATGTGGTAAGAGTTGTAGGCTAAGGTGGACCAATTATTTAAGGCCTGATATTAAGAGAGGAAAATTTTCTCAAGAAGAGGAGCAAACAATTCTTCATCTTCATTCAATCCTTGGAAACAAGTACTTTTCATGCCATAACTTTAATTTTTTTTGTATAATTTTTCCTAGCAAATATAACCAAAGATATCAAGTCTTAAAACTATCATTTGAATTATGTTATCAATTCCTTCTTTTTTTTTTTTTGTTAATTTGTATTTTTACGTCTTTAACACTTAAAGATGAAATTATAAACTAGAGACGAATTTCATTTATGCTAGCTCTAATTTCCGTTGAAAATTCAACTTGTTTAAGACCGTAAATTTTTAAAACAAGTTGAATTATTAGTAGAAATTAAAGATGGTAGAAATGAAATTCTCTAAGCATTTATTTTGTATTTATTCTACTACGAATTATCATTATTATACTTACTTCTATATGCACCTTTAACAGATGGTCAGCAATTGCCACACATCTACCTGGAAGAACAGATAATGAGATAAAGAATTTCTGGAACACTCATTTGAAGAAAAAGTTGATTCAGATGGGTTTTGATCCAATGACTCATCAACCAAGAACTGATCTTGTTTCCACCATACCATATCTACTAGCTTTAGCAAACATGACAGAACTTATGGATCATCATAATCAGTCATCATGGGATGATCAACAACATGCTGCAATGAGTAGTTTACAAGCAGAAGCAGTTCATCTTGCAAAGTTTCAATGCCTTCAATATTTACTCCAATCTTCAAATTCTTCTATAAACATTAATAATAATTCCTATGACCAAAATGCCATGATCACAAACATGGAACAACAACAACCCTTAAGTTTATTAAACACAATCTCTAATGTGAAAGAGAACATAATAATGGACTGTTCACAACTGGATAGTACTCATGCAGCCTCATTTTCTCAACCACTCCACCACCAAAGTGTGCTACCCCACTTTTTAGACCCACAACAAGTCTCTTTCAGTTCACAATCATGTTTGAATAATGAACAAAGTCAAGGTGGTACTATTACCAACTTTGCAACAGTTGATGAAACATCATCATGGATTAATGTTCCATCTTCTGCTCCAATATCTGTTCCTCTAAATGCTATGGGGATTTCAGCAGGAGATGCAAGCAGCTGCACTTCTAGCTATGGAGGAGGAGGAGGACCCTCTCCAGTATCTTATTGGTCTGAACTTTTTTTTGAGGACCCCATTATGCATGATTTATCTTAA

Protein sequence

>MS.gene022479.t1

MGRSPCCDESGLKKGPWTPEEDQKLVEHIQQHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTIPYLLALANMTELMDHHNQSSWDDQQHAAMSSLQAEAVHLAKFQCLQYLLQSSNSSININNNSYDQNAMITNMEQQQPLSLLNTISNVKENIIMDCSQLDSTHAASFSQPLHHQSVLPHFLDPQQVSFSSQSCLNNEQSQGGTITNFATVDETSSWINVPSSAPISVPLNAMGISAGDASSCTSSYGGGGGPSPVSYWSELFFEDPIMHDLS