AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60976


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60976.t1 MTR_2g064160 94.888 313 14 1 1 311 1 313 0.0 598
MS.gene60976.t1 MTR_2g099740 55.660 212 82 4 1 204 1 208 1.05e-69 222
MS.gene60976.t1 MTR_8g017440 64.780 159 47 2 1 158 1 151 3.11e-68 216
MS.gene60976.t1 MTR_8g017540 54.673 214 82 5 1 203 47 256 1.56e-67 216
MS.gene60976.t1 MTR_4g105130 55.738 183 68 2 1 170 1 183 3.30e-67 214
MS.gene60976.t1 MTR_1g085040 70.769 130 37 1 1 129 1 130 3.70e-67 214
MS.gene60976.t1 MTR_1g112760 52.525 198 77 4 3 194 5 191 5.19e-66 207
MS.gene60976.t1 MTR_7g110830 70.769 130 37 1 1 129 1 130 1.61e-65 210
MS.gene60976.t1 MTR_1g085640 69.231 130 39 1 1 129 1 130 7.93e-65 209
MS.gene60976.t1 MTR_8g017500 65.972 144 48 1 1 143 1 144 8.48e-65 207
MS.gene60976.t1 MTR_3g077110 72.222 126 34 1 1 125 1 126 2.53e-64 206
MS.gene60976.t1 MTR_8g017340 76.613 124 27 2 1 122 1 124 6.72e-63 207
MS.gene60976.t1 MTR_8g017390 77.311 119 25 2 1 117 1 119 3.34e-62 204
MS.gene60976.t1 MTR_8g017350 76.613 124 27 2 1 122 1 124 4.70e-62 208
MS.gene60976.t1 MTR_8g098860 72.414 116 31 1 1 115 1 116 2.37e-60 195
MS.gene60976.t1 MTR_7g111290 70.000 130 38 1 1 129 1 130 4.29e-60 196
MS.gene60976.t1 MTR_3g074520 66.942 121 40 0 5 125 6 126 3.48e-59 193
MS.gene60976.t1 MTR_5g010020 73.636 110 28 1 1 109 1 110 1.27e-58 191
MS.gene60976.t1 MTR_4g478180 66.116 121 41 0 5 125 7 127 2.43e-58 191
MS.gene60976.t1 MTR_5g029840 62.810 121 45 0 5 125 6 126 1.45e-57 189
MS.gene60976.t1 MTR_6g012690 47.179 195 98 1 5 194 6 200 5.76e-57 187
MS.gene60976.t1 MTR_4g073420 49.419 172 82 2 5 171 6 177 2.34e-56 184
MS.gene60976.t1 MTR_5g007370 45.455 220 105 4 11 217 12 229 3.12e-56 184
MS.gene60976.t1 MTR_8g031360 63.846 130 45 2 5 132 6 135 3.58e-56 184
MS.gene60976.t1 MTR_5g079670 62.205 127 48 0 1 127 1 127 1.32e-55 179
MS.gene60976.t1 MTR_7g076740 62.992 127 46 1 5 130 6 132 1.81e-55 182
MS.gene60976.t1 MTR_4g102380 64.341 129 45 1 1 128 1 129 1.89e-55 181
MS.gene60976.t1 MTR_3g097450 60.630 127 50 0 5 131 6 132 5.08e-55 181
MS.gene60976.t1 MTR_3g065440 62.121 132 49 1 1 131 1 132 5.64e-55 181
MS.gene60976.t1 MTR_7g011170 59.259 135 50 1 5 134 6 140 8.75e-55 181
MS.gene60976.t1 MTR_6g009430 61.600 125 48 0 5 129 6 130 9.17e-55 181
MS.gene60976.t1 MTR_4g091490 63.415 123 44 1 5 126 6 128 1.98e-54 181
MS.gene60976.t1 MTR_8g095390 61.111 126 49 0 5 130 6 131 2.48e-54 179
MS.gene60976.t1 MTR_3g461490 62.400 125 47 0 5 129 6 130 4.19e-54 179
MS.gene60976.t1 MTR_5g078140 61.364 132 50 1 1 131 1 132 7.59e-54 179
MS.gene60976.t1 MTR_2g089620 61.983 121 46 0 5 125 6 126 9.39e-54 178
MS.gene60976.t1 MTR_2g011660 62.295 122 45 1 5 125 6 127 1.34e-53 179
MS.gene60976.t1 MTR_4g082230 55.882 136 60 0 5 140 6 141 1.70e-53 180
MS.gene60976.t1 MTR_1g100653 62.121 132 45 2 5 136 6 132 2.17e-53 177
MS.gene60976.t1 MTR_4g082290 56.618 136 59 0 5 140 6 141 2.57e-53 179
MS.gene60976.t1 MTR_3g028740 67.890 109 35 0 7 115 18 126 3.07e-51 172
MS.gene60976.t1 MTR_3g083540 55.333 150 64 1 5 151 35 184 4.86e-51 171
MS.gene60976.t1 MTR_4g485530 60.976 123 48 0 5 127 6 128 1.78e-50 166
MS.gene60976.t1 MTR_1g076150 57.778 135 56 1 5 139 6 139 1.84e-50 168
MS.gene60976.t1 MTR_4g065017 65.179 112 39 0 10 121 16 127 2.88e-50 169
MS.gene60976.t1 MTR_1g100667 50.602 166 77 3 7 172 9 169 4.15e-50 167
MS.gene60976.t1 MTR_2g097910 60.976 123 39 1 11 133 20 133 6.54e-50 168
MS.gene60976.t1 MTR_2g089450 61.261 111 43 0 6 116 7 117 3.96e-49 164
MS.gene60976.t1 MTR_1g043050 61.607 112 43 0 5 116 6 117 9.01e-49 163
MS.gene60976.t1 MTR_1g017000 49.383 162 70 3 5 154 6 167 1.02e-48 163
MS.gene60976.t1 MTR_2g067420 63.810 105 38 0 5 109 8 112 1.08e-48 166
MS.gene60976.t1 MTR_1g043080 53.623 138 61 1 5 139 6 143 4.02e-48 162
MS.gene60976.t1 MTR_5g042030 59.130 115 47 0 11 125 7 121 6.28e-48 162
MS.gene60976.t1 MTR_6g055910 57.576 132 55 1 8 138 11 142 6.84e-48 162
MS.gene60976.t1 MTR_7g115650 49.091 165 65 3 5 157 6 163 1.16e-47 159
MS.gene60976.t1 MTR_7g096930 60.360 111 44 0 5 115 6 116 3.68e-47 160
MS.gene60976.t1 MTR_0251s0050 59.459 111 45 0 5 115 7 117 1.14e-46 159
MS.gene60976.t1 MTR_4g121460 40.351 228 108 6 5 206 6 231 1.66e-46 160
MS.gene60976.t1 MTR_7g010210 61.261 111 43 0 5 115 6 116 2.26e-46 159
MS.gene60976.t1 MTR_7g010210 61.261 111 43 0 5 115 6 116 2.70e-46 157
MS.gene60976.t1 MTR_0008s0390 59.821 112 45 0 5 116 7 118 2.74e-46 157
MS.gene60976.t1 MTR_7g117730 59.649 114 46 0 5 118 6 119 1.07e-45 155
MS.gene60976.t1 MTR_4g125520 57.658 111 47 0 5 115 6 116 1.21e-45 157
MS.gene60976.t1 MTR_2g034790 41.451 193 98 4 5 184 6 196 3.81e-45 156
MS.gene60976.t1 MTR_0140s0030 59.459 111 45 0 5 115 7 117 1.06e-44 155
MS.gene60976.t1 MTR_0489s0020 59.459 111 45 0 5 115 7 117 1.06e-44 155
MS.gene60976.t1 MTR_7g087130 55.556 135 56 2 5 135 6 140 1.48e-44 155
MS.gene60976.t1 MTR_3g039990 59.459 111 45 0 5 115 7 117 2.31e-44 154
MS.gene60976.t1 MTR_0008s0470 56.250 112 49 0 5 116 7 118 2.46e-44 153
MS.gene60976.t1 MTR_8g027345 57.658 111 47 0 5 115 6 116 6.57e-44 152
MS.gene60976.t1 MTR_3g103570 44.565 184 90 4 5 177 6 188 7.95e-44 153
MS.gene60976.t1 MTR_6g012180 60.000 105 42 0 5 109 6 110 2.08e-43 151
MS.gene60976.t1 MTR_2g089420 54.955 111 50 0 6 116 6 116 3.15e-43 154
MS.gene60976.t1 MTR_0008s0280 56.604 106 46 0 8 113 9 114 1.03e-42 147
MS.gene60976.t1 MTR_4g057635 57.895 114 47 1 5 117 6 119 1.04e-42 150
MS.gene60976.t1 MTR_0063s0090 59.048 105 43 0 8 112 9 113 2.05e-42 146
MS.gene60976.t1 MTR_1g017140 55.652 115 50 1 5 118 6 120 4.17e-42 149
MS.gene60976.t1 MTR_8g020490 56.250 112 49 0 7 118 4 115 7.92e-42 145
MS.gene60976.t1 MTR_2g095520 49.068 161 64 4 5 159 6 154 1.23e-41 147
MS.gene60976.t1 MTR_4g100720 58.333 108 45 0 7 114 9 116 1.63e-41 142
MS.gene60976.t1 MTR_7g035075 55.752 113 48 1 5 115 6 118 3.47e-41 142
MS.gene60976.t1 MTR_6g006030 40.404 198 86 4 5 200 6 173 3.53e-41 142
MS.gene60976.t1 MTR_7g102110 52.308 130 57 2 5 129 6 135 5.97e-41 144
MS.gene60976.t1 MTR_1g045610 53.509 114 53 0 1 114 11 124 7.01e-41 143
MS.gene60976.t1 MTR_5g014990 53.913 115 52 1 5 118 6 120 7.69e-41 144
MS.gene60976.t1 MTR_8g042410 59.615 104 42 0 11 114 37 140 1.19e-40 149
MS.gene60976.t1 MTR_6g090405 57.895 114 47 1 5 117 6 119 1.31e-40 142
MS.gene60976.t1 MTR_4g097570 60.000 105 41 1 5 108 6 110 2.70e-40 142
MS.gene60976.t1 MTR_3g011610 57.692 104 44 0 11 114 37 140 3.33e-40 147
MS.gene60976.t1 MTR_1g073170 53.097 113 53 0 2 114 11 123 5.14e-40 140
MS.gene60976.t1 MTR_4g097570 59.434 106 41 2 5 108 6 111 3.15e-39 140
MS.gene60976.t1 MTR_7g109320 59.322 118 47 1 1 117 1 118 3.78e-39 141
MS.gene60976.t1 MTR_1g086510 55.769 104 46 0 11 114 21 124 4.13e-39 139
MS.gene60976.t1 MTR_1g110460 53.333 105 49 0 10 114 25 129 4.54e-39 140
MS.gene60976.t1 MTR_3g052450 55.455 110 48 1 11 120 40 148 5.99e-39 144
MS.gene60976.t1 MTR_1g021230 57.692 104 44 0 11 114 57 160 1.26e-38 142
MS.gene60976.t1 MTR_3g052430 54.545 110 49 1 11 120 41 149 1.54e-38 143
MS.gene60976.t1 MTR_4g128670 55.660 106 46 1 5 109 6 111 2.92e-38 139
MS.gene60976.t1 MTR_1g062940 50.000 110 54 1 11 119 6 115 3.23e-38 135
MS.gene60976.t1 MTR_0197s0010 36.735 196 104 3 16 191 6 201 2.38e-37 133
MS.gene60976.t1 MTR_1g086530 52.885 104 49 0 11 114 33 136 2.94e-37 134
MS.gene60976.t1 MTR_3g045430 38.614 202 105 4 5 202 7 193 2.84e-36 132
MS.gene60976.t1 MTR_4g063100 48.182 110 57 0 5 114 1 110 3.17e-36 130
MS.gene60976.t1 MTR_2g096380 47.664 107 56 0 8 114 3 109 2.06e-35 128
MS.gene60976.t1 MTR_5g079120 48.246 114 59 0 8 121 58 171 3.60e-35 129
MS.gene60976.t1 MTR_7g111290 68.182 88 28 0 42 129 1 88 4.30e-35 130
MS.gene60976.t1 MTR_2g088170 56.481 108 47 0 7 114 25 132 8.89e-35 131
MS.gene60976.t1 MTR_5g062790 49.573 117 57 2 12 127 10 125 1.10e-34 128
MS.gene60976.t1 MTR_5g079290 49.091 110 56 0 11 120 17 126 1.73e-34 126
MS.gene60976.t1 MTR_5g079220 46.903 113 60 0 6 118 16 128 3.65e-34 126
MS.gene60976.t1 MTR_7g017260 50.000 110 53 1 11 118 25 134 7.28e-34 125
MS.gene60976.t1 MTR_5g088080 48.718 117 58 2 12 127 13 128 1.50e-33 124
MS.gene60976.t1 MTR_5g088150 48.718 117 58 2 12 127 13 128 1.50e-33 124
MS.gene60976.t1 MTR_5g488210 48.718 117 58 2 12 127 13 128 1.50e-33 124
MS.gene60976.t1 MTR_5g488170 48.718 117 58 2 12 127 13 128 1.72e-33 123
MS.gene60976.t1 MTR_5g088640 48.718 117 58 2 12 127 13 128 1.74e-33 124
MS.gene60976.t1 MTR_5g078910 49.541 109 55 0 9 117 5 113 3.72e-33 124
MS.gene60976.t1 MTR_2g033170 52.427 103 49 0 11 113 24 126 4.22e-33 124
MS.gene60976.t1 MTR_5g078800 49.091 110 56 0 9 118 5 114 4.86e-33 122
MS.gene60976.t1 MTR_8g006470 50.000 112 55 1 3 113 2 113 9.15e-33 122
MS.gene60976.t1 MTR_8g060940 50.505 99 49 0 11 109 7 105 1.50e-32 121
MS.gene60976.t1 MTR_1g083630 48.387 124 58 1 10 127 11 134 2.30e-32 126
MS.gene60976.t1 MTR_0001s0360 48.182 110 57 0 9 118 5 114 3.22e-32 120
MS.gene60976.t1 MTR_0247s0040 49.020 102 52 0 11 112 7 108 4.10e-32 118
MS.gene60976.t1 MTR_4g123040 52.427 103 49 0 11 113 24 126 4.29e-32 121
MS.gene60976.t1 MTR_5g078950 50.000 104 52 0 9 112 5 108 5.19e-32 120
MS.gene60976.t1 MTR_5g078930 48.276 116 59 1 5 119 2 117 1.02e-31 118
MS.gene60976.t1 MTR_5g078860 47.273 110 58 0 9 118 5 114 1.56e-31 120
MS.gene60976.t1 MTR_0193s0090 46.226 106 57 0 11 116 7 112 2.18e-31 117
MS.gene60976.t1 MTR_4g029540 51.923 104 49 1 11 113 10 113 2.53e-31 119
MS.gene60976.t1 MTR_5g070020 36.364 187 96 5 13 197 122 287 1.63e-30 118
MS.gene60976.t1 MTR_6g055910 54.082 98 44 1 42 138 16 113 5.80e-30 114
MS.gene60976.t1 MTR_5g088610 44.355 124 67 2 5 127 3 125 8.15e-30 116
MS.gene60976.t1 MTR_5g007300 59.259 81 33 0 7 87 60 140 8.95e-30 110
MS.gene60976.t1 MTR_7g061330 52.885 104 46 2 13 115 113 214 3.21e-29 117
MS.gene60976.t1 MTR_7g461410 52.885 104 46 2 13 115 113 214 3.21e-29 117
MS.gene60976.t1 MTR_4g019370 51.429 105 48 2 13 116 38 140 3.70e-29 114
MS.gene60976.t1 MTR_7g061330 52.885 104 46 2 13 115 77 178 3.91e-29 117
MS.gene60976.t1 MTR_1g057980 50.000 100 49 1 11 110 78 176 1.71e-28 111
MS.gene60976.t1 MTR_6g074860 43.165 139 66 5 13 144 4 136 2.55e-28 109
MS.gene60976.t1 MTR_3g463400 46.602 103 52 2 13 114 133 233 6.99e-28 112
MS.gene60976.t1 MTR_5g016510 49.091 110 53 2 13 121 5 112 1.09e-27 110
MS.gene60976.t1 MTR_4g063100 59.722 72 29 0 43 114 10 81 1.16e-27 107
MS.gene60976.t1 MTR_7g451170 36.709 158 81 3 13 170 191 329 1.23e-27 111
MS.gene60976.t1 MTR_3g110028 46.218 119 58 3 13 127 85 201 1.34e-27 113
MS.gene60976.t1 MTR_4g094982 49.020 102 51 1 13 114 5 105 4.56e-27 107
MS.gene60976.t1 MTR_7g037260 45.192 104 56 1 11 114 143 245 4.97e-27 108
MS.gene60976.t1 MTR_4g088015 45.631 103 55 1 11 113 219 320 1.26e-26 108
MS.gene60976.t1 MTR_5g041570 47.273 110 55 2 10 118 131 238 1.51e-26 108
MS.gene60976.t1 MTR_3g101290 48.039 102 52 1 13 114 37 137 1.58e-26 104
MS.gene60976.t1 MTR_1g026870 46.789 109 55 2 10 117 82 188 1.76e-26 110
MS.gene60976.t1 MTR_4g082040 37.975 158 94 3 13 168 105 260 3.27e-26 107
MS.gene60976.t1 MTR_6g015455 50.000 110 52 2 13 121 5 112 4.15e-26 108
MS.gene60976.t1 MTR_2g096380 56.944 72 31 0 43 114 19 90 1.09e-25 102
MS.gene60976.t1 MTR_6g027360 46.465 99 50 2 10 107 75 171 2.06e-25 103
MS.gene60976.t1 MTR_4g105660 45.370 108 56 2 8 114 175 280 3.51e-25 104
MS.gene60976.t1 MTR_5g049190 36.905 168 99 5 8 174 14 175 3.51e-25 101
MS.gene60976.t1 MTR_7g450950 42.857 98 55 1 13 110 157 253 8.45e-25 102
MS.gene60976.t1 MTR_3g077650 44.545 110 56 3 8 114 174 281 1.19e-24 103
MS.gene60976.t1 MTR_4g128190 39.837 123 58 3 1 122 1 108 1.75e-24 99.8
MS.gene60976.t1 MTR_1g085880 46.729 107 55 2 9 113 9 115 1.78e-24 98.2
MS.gene60976.t1 MTR_7g037130 41.071 112 62 2 11 119 143 253 3.22e-24 101
MS.gene60976.t1 MTR_6g027340 45.455 99 51 2 10 107 13 109 5.80e-24 97.4
MS.gene60976.t1 MTR_1g085770 46.729 107 55 2 9 113 9 115 9.97e-24 99.0
MS.gene60976.t1 MTR_7g035350 40.625 128 61 3 11 138 224 336 1.02e-23 100
MS.gene60976.t1 MTR_5g082910 47.000 100 50 2 13 111 19 116 1.03e-23 98.6
MS.gene60976.t1 MTR_3g089045 49.515 103 49 2 13 114 16 116 1.72e-23 98.2
MS.gene60976.t1 MTR_8g017480 78.846 52 10 1 1 51 1 52 2.03e-23 91.3
MS.gene60976.t1 MTR_5g010650 44.898 98 52 2 11 108 109 204 6.30e-22 95.9
MS.gene60976.t1 MTR_6g027370 36.735 147 69 4 13 158 99 222 1.36e-20 90.9
MS.gene60976.t1 MTR_7g086960 42.157 102 58 1 13 114 89 189 7.50e-20 89.0
MS.gene60976.t1 MTR_5g038910 37.190 121 73 2 16 135 29 147 9.50e-20 89.0
MS.gene60976.t1 MTR_5g038910 37.190 121 73 2 16 135 29 147 1.58e-19 89.0
MS.gene60976.t1 MTR_7g061550 27.751 209 122 6 13 203 7 204 2.01e-18 85.1
MS.gene60976.t1 MTR_8g468380 37.143 140 74 5 16 154 25 151 3.02e-18 85.1
MS.gene60976.t1 MTR_0023s0210 44.156 77 43 0 11 87 7 83 3.61e-18 78.2
MS.gene60976.t1 MTR_6g055910 45.070 71 38 1 69 138 2 72 2.38e-13 68.6
MS.gene60976.t1 MTR_1g008970 55.769 52 23 0 47 98 124 175 4.95e-12 65.1
MS.gene60976.t1 MTR_4g063100 50.000 46 23 0 69 114 1 46 8.58e-12 63.5
MS.gene60976.t1 MTR_2g096380 47.826 46 24 0 69 114 1 46 7.75e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60976.t1 AT3G12720 62.745 204 67 3 1 203 12 207 1.31e-84 257
MS.gene60976.t1 AT1G57560 50.000 216 91 2 3 203 4 217 4.84e-69 218
MS.gene60976.t1 AT1G57560 55.155 194 60 5 3 180 4 186 1.26e-68 215
MS.gene60976.t1 AT5G26660 72.093 129 35 1 1 128 1 129 6.10e-67 213
MS.gene60976.t1 AT4G01680 70.769 130 37 1 1 129 1 130 1.06e-66 209
MS.gene60976.t1 AT3G13890 56.477 193 81 2 1 192 1 191 1.67e-66 213
MS.gene60976.t1 AT1G09540 70.769 130 37 1 1 129 1 130 5.37e-66 211
MS.gene60976.t1 AT4G01680 70.769 130 37 1 1 129 1 130 7.28e-66 210
MS.gene60976.t1 AT3G13890 53.960 202 81 3 1 192 1 200 2.44e-63 204
MS.gene60976.t1 AT4G01680 64.789 142 37 2 1 129 1 142 2.57e-62 201
MS.gene60976.t1 AT1G63910 72.414 116 31 1 1 115 1 116 2.48e-60 197
MS.gene60976.t1 AT3G02940 66.942 121 40 0 5 125 6 126 1.18e-59 193
MS.gene60976.t1 AT5G65230 69.565 115 35 0 11 125 12 126 1.30e-59 193
MS.gene60976.t1 AT3G02940 66.942 121 40 0 5 125 6 126 2.74e-59 192
MS.gene60976.t1 AT3G02940 66.942 121 40 0 5 125 6 126 2.74e-59 192
MS.gene60976.t1 AT3G61250 65.079 126 44 0 5 130 6 131 3.04e-59 192
MS.gene60976.t1 AT5G15310 45.872 218 108 3 5 218 6 217 4.23e-59 190
MS.gene60976.t1 AT3G01140 62.319 138 48 1 5 138 6 143 6.26e-59 192
MS.gene60976.t1 AT3G01140 62.319 138 48 1 5 138 49 186 2.74e-58 192
MS.gene60976.t1 AT1G34670 66.116 121 41 0 5 125 6 126 6.68e-58 190
MS.gene60976.t1 AT5G15310 44.690 226 114 4 5 226 6 224 5.33e-57 187
MS.gene60976.t1 AT5G16770 63.636 121 44 0 5 125 6 126 6.93e-57 186
MS.gene60976.t1 AT5G16770 63.636 121 44 0 5 125 6 126 6.93e-57 186
MS.gene60976.t1 AT5G15310 64.463 121 43 0 5 125 6 126 8.19e-57 186
MS.gene60976.t1 AT5G10280 61.905 126 47 1 1 125 1 126 1.18e-56 186
MS.gene60976.t1 AT5G16770 63.636 121 44 0 5 125 6 126 1.52e-56 186
MS.gene60976.t1 AT5G16770 63.636 121 44 0 5 125 6 126 1.52e-56 186
MS.gene60976.t1 AT5G54230 52.332 193 70 6 11 199 12 186 2.00e-56 185
MS.gene60976.t1 AT5G61420 54.839 155 65 2 5 154 6 160 3.22e-56 186
MS.gene60976.t1 AT4G21440 64.463 121 43 0 5 125 6 126 3.49e-56 186
MS.gene60976.t1 AT5G56110 51.829 164 66 1 5 168 6 156 7.13e-56 184
MS.gene60976.t1 AT4G09460 62.205 127 48 0 5 131 6 132 9.94e-56 181
MS.gene60976.t1 AT4G22680 53.846 156 72 0 5 160 6 161 1.71e-55 181
MS.gene60976.t1 AT4G05100 62.295 122 45 1 5 125 6 127 2.25e-55 182
MS.gene60976.t1 AT1G22640 60.630 127 50 0 5 131 6 132 2.88e-55 180
MS.gene60976.t1 AT4G34990 56.296 135 59 0 5 139 6 140 3.06e-55 181
MS.gene60976.t1 AT2G16720 61.157 121 47 0 5 125 6 126 5.88e-55 180
MS.gene60976.t1 AT5G07700 51.220 164 69 1 6 158 7 170 9.29e-55 181
MS.gene60976.t1 AT5G07700 51.220 164 69 1 6 158 7 170 9.29e-55 181
MS.gene60976.t1 AT4G38620 49.704 169 76 2 5 169 6 169 1.46e-54 179
MS.gene60976.t1 AT4G12350 62.097 124 47 0 5 128 6 129 1.96e-54 179
MS.gene60976.t1 AT1G35515 48.538 171 72 2 5 170 6 165 2.93e-54 176
MS.gene60976.t1 AT4G28110 59.836 122 49 0 5 126 6 127 6.63e-54 177
MS.gene60976.t1 AT1G66230 61.538 130 49 1 1 129 1 130 4.03e-53 176
MS.gene60976.t1 AT3G13540 58.730 126 52 0 5 130 17 142 4.31e-53 174
MS.gene60976.t1 AT1G18570 52.381 147 63 2 5 144 6 152 5.30e-53 177
MS.gene60976.t1 AT5G07690 58.400 125 52 0 5 129 6 130 9.63e-53 176
MS.gene60976.t1 AT4G17785 59.836 122 48 1 5 125 6 127 1.31e-52 176
MS.gene60976.t1 AT3G23250 46.875 192 95 4 5 195 6 191 1.49e-52 174
MS.gene60976.t1 AT4G17785 59.836 122 48 1 5 125 6 127 1.64e-52 176
MS.gene60976.t1 AT5G60890 49.664 149 70 1 5 148 6 154 7.24e-52 172
MS.gene60976.t1 AT5G16600 60.769 130 50 1 1 129 1 130 2.28e-51 172
MS.gene60976.t1 AT1G74430 63.478 115 42 0 11 125 12 126 4.08e-51 170
MS.gene60976.t1 AT5G12870 70.093 107 32 0 9 115 16 122 4.32e-51 170
MS.gene60976.t1 AT5G62320 58.594 128 46 1 5 125 7 134 2.43e-50 167
MS.gene60976.t1 AT1G56160 63.964 111 40 0 5 115 8 118 4.16e-50 168
MS.gene60976.t1 AT3G28470 60.000 125 50 0 5 129 6 130 7.71e-50 168
MS.gene60976.t1 AT2G31180 63.063 111 41 0 5 115 6 116 1.94e-49 165
MS.gene60976.t1 AT3G08500 62.393 117 40 1 3 115 18 134 1.96e-49 168
MS.gene60976.t1 AT1G79180 63.964 111 40 0 5 115 8 118 2.21e-49 166
MS.gene60976.t1 AT1G74080 50.704 142 61 1 5 137 6 147 4.68e-49 166
MS.gene60976.t1 AT1G16490 61.404 114 44 0 5 118 8 121 1.05e-48 164
MS.gene60976.t1 AT1G06180 62.162 111 42 0 5 115 6 116 2.18e-48 162
MS.gene60976.t1 AT5G49330 59.200 125 50 1 5 128 6 130 2.19e-48 165
MS.gene60976.t1 AT5G14340 61.157 121 47 0 5 125 18 138 3.14e-48 162
MS.gene60976.t1 AT1G18710 60.000 115 46 0 11 125 12 126 1.51e-47 160
MS.gene60976.t1 AT3G12820 58.772 114 47 0 5 118 8 121 5.06e-47 158
MS.gene60976.t1 AT3G47600 50.993 151 59 2 5 145 6 151 3.79e-46 159
MS.gene60976.t1 AT2G47460 63.063 111 41 0 5 115 6 116 4.33e-46 160
MS.gene60976.t1 AT1G74650 60.714 112 44 0 5 116 6 117 1.54e-45 157
MS.gene60976.t1 AT5G62470 52.857 140 66 0 5 144 6 145 3.14e-45 157
MS.gene60976.t1 AT1G08810 52.482 141 65 1 5 143 6 146 6.82e-45 154
MS.gene60976.t1 AT5G52260 62.385 109 41 0 8 116 9 117 7.21e-45 154
MS.gene60976.t1 AT3G48920 60.748 107 42 0 7 113 14 120 1.28e-44 153
MS.gene60976.t1 AT3G28910 60.360 111 44 0 5 115 6 116 1.68e-44 154
MS.gene60976.t1 AT4G25560 61.947 113 42 1 9 120 8 120 1.94e-44 153
MS.gene60976.t1 AT3G62610 54.331 127 58 0 5 131 6 132 2.30e-44 154
MS.gene60976.t1 AT5G23000 58.407 113 46 1 5 116 6 118 9.40e-44 152
MS.gene60976.t1 AT5G62470 52.857 140 65 1 5 144 6 144 2.03e-43 152
MS.gene60976.t1 AT5G35550 47.586 145 66 2 8 152 11 145 3.11e-43 149
MS.gene60976.t1 AT2G36890 54.839 124 55 1 5 127 6 129 4.07e-43 150
MS.gene60976.t1 AT2G36890 54.839 124 55 1 5 127 47 170 7.96e-43 150
MS.gene60976.t1 AT5G14750 58.654 104 43 0 12 115 17 120 8.56e-43 146
MS.gene60976.t1 AT1G79180 49.306 144 40 1 5 115 8 151 1.15e-42 150
MS.gene60976.t1 AT5G40350 56.364 110 48 0 10 119 16 125 1.44e-42 146
MS.gene60976.t1 AT5G52600 57.407 108 46 0 7 114 8 115 1.73e-42 145
MS.gene60976.t1 AT3G27810 48.630 146 73 2 7 152 16 159 1.93e-42 146
MS.gene60976.t1 AT5G40330 58.654 104 43 0 12 115 13 116 3.82e-42 145
MS.gene60976.t1 AT3G27920 54.128 109 50 0 9 117 12 120 7.85e-42 145
MS.gene60976.t1 AT5G26660 72.941 85 23 0 44 128 14 98 1.25e-41 147
MS.gene60976.t1 AT3G49690 55.652 115 50 1 5 118 6 120 1.28e-41 146
MS.gene60976.t1 AT5G06100 54.310 116 50 1 2 114 20 135 1.79e-41 149
MS.gene60976.t1 AT4G37780 55.652 115 50 1 5 118 6 120 2.06e-41 146
MS.gene60976.t1 AT3G01530 58.095 105 44 0 11 115 25 129 2.10e-41 143
MS.gene60976.t1 AT5G57620 53.913 115 52 1 5 118 6 120 3.07e-41 146
MS.gene60976.t1 AT5G06100 54.310 116 50 1 2 114 20 135 6.02e-41 149
MS.gene60976.t1 AT5G06100 54.310 116 50 1 2 114 20 135 6.02e-41 149
MS.gene60976.t1 AT5G06100 54.310 116 50 1 2 114 20 135 6.02e-41 149
MS.gene60976.t1 AT5G06100 54.310 116 50 1 2 114 20 135 6.02e-41 149
MS.gene60976.t1 AT3G11440 53.982 113 49 1 5 114 32 144 2.27e-40 147
MS.gene60976.t1 AT5G65790 53.913 115 52 1 5 118 6 120 2.69e-40 144
MS.gene60976.t1 AT3G11440 53.982 113 49 1 5 114 32 144 7.94e-40 147
MS.gene60976.t1 AT3G11440 53.982 113 49 1 5 114 32 144 7.94e-40 147
MS.gene60976.t1 AT3G11440 53.982 113 49 1 5 114 32 144 7.94e-40 147
MS.gene60976.t1 AT1G48000 56.731 104 45 0 10 113 31 134 8.37e-40 140
MS.gene60976.t1 AT2G32460 56.604 106 46 0 9 114 16 121 9.34e-40 145
MS.gene60976.t1 AT2G32460 56.604 106 46 0 9 114 4 109 9.35e-40 145
MS.gene60976.t1 AT5G55020 55.455 110 48 1 11 120 26 134 1.90e-39 145
MS.gene60976.t1 AT4G13480 59.223 103 42 0 12 114 7 109 2.72e-39 139
MS.gene60976.t1 AT3G30210 57.843 102 43 0 12 113 28 129 6.20e-39 139
MS.gene60976.t1 AT3G24310 58.252 103 43 0 12 114 19 121 7.63e-39 138
MS.gene60976.t1 AT2G26960 53.774 106 49 0 8 113 17 122 9.30e-39 142
MS.gene60976.t1 AT4G26930 54.545 110 49 1 11 120 19 127 4.41e-38 139
MS.gene60976.t1 AT2G47190 50.000 104 52 0 11 114 20 123 5.54e-37 133
MS.gene60976.t1 AT1G68320 50.943 106 52 0 9 114 17 122 3.41e-36 132
MS.gene60976.t1 AT3G53200 50.450 111 55 0 8 118 6 116 5.12e-36 130
MS.gene60976.t1 AT1G25340 45.299 117 64 0 12 128 19 135 7.69e-36 130
MS.gene60976.t1 AT3G06490 57.282 103 44 0 11 113 19 121 1.88e-35 130
MS.gene60976.t1 AT5G59780 48.598 107 55 0 8 114 5 111 1.14e-34 126
MS.gene60976.t1 AT3G46130 49.515 103 52 0 12 114 10 112 9.02e-34 124
MS.gene60976.t1 AT2G26950 45.690 116 62 1 5 120 10 124 1.42e-33 127
MS.gene60976.t1 AT3G60460 51.376 109 52 1 6 113 6 114 2.00e-33 125
MS.gene60976.t1 AT5G49620 53.398 103 48 0 11 113 26 128 2.47e-33 124
MS.gene60976.t1 AT1G66370 44.094 127 71 0 7 133 4 130 1.96e-32 120
MS.gene60976.t1 AT3G27810 51.351 111 52 2 42 152 2 110 1.20e-31 116
MS.gene60976.t1 AT5G40350 63.158 76 28 0 44 119 5 80 3.28e-31 115
MS.gene60976.t1 AT1G25340 42.735 117 62 1 12 128 19 130 6.06e-31 117
MS.gene60976.t1 AT1G25340 42.735 117 62 1 12 128 19 130 1.32e-30 117
MS.gene60976.t1 AT5G35550 47.748 111 48 2 42 152 48 148 5.09e-30 115
MS.gene60976.t1 AT5G14750 66.667 69 23 0 47 115 18 86 7.03e-30 112
MS.gene60976.t1 AT3G47600 50.893 112 40 2 44 145 39 145 7.69e-30 115
MS.gene60976.t1 AT1G66380 50.000 108 54 0 7 114 4 111 8.74e-30 110
MS.gene60976.t1 AT3G09370 37.500 200 115 5 13 205 135 331 1.08e-29 118
MS.gene60976.t1 AT3G09370 37.500 200 115 5 13 205 130 326 1.13e-29 118
MS.gene60976.t1 AT3G09370 37.500 200 115 5 13 205 143 339 1.28e-29 118
MS.gene60976.t1 AT5G40360 48.649 111 53 3 8 117 153 260 1.32e-29 115
MS.gene60976.t1 AT5G49620 47.009 117 48 1 11 113 26 142 1.35e-29 115
MS.gene60976.t1 AT3G27785 50.000 108 51 2 8 114 184 289 1.76e-29 117
MS.gene60976.t1 AT1G22640 62.162 74 28 0 58 131 2 75 4.76e-29 110
MS.gene60976.t1 AT3G12820 63.889 72 26 0 47 118 2 73 9.13e-29 109
MS.gene60976.t1 AT1G56650 50.000 108 54 0 7 114 4 111 1.33e-28 110
MS.gene60976.t1 AT1G66390 49.074 108 55 0 7 114 4 111 2.29e-28 110
MS.gene60976.t1 AT5G02320 50.000 104 49 2 13 115 127 228 5.34e-28 114
MS.gene60976.t1 AT5G02320 28.926 121 84 2 13 132 75 194 1.36e-11 65.5
MS.gene60976.t1 AT5G02320 50.000 104 49 2 13 115 127 228 5.34e-28 114
MS.gene60976.t1 AT5G02320 28.926 121 84 2 13 132 75 194 1.36e-11 65.5
MS.gene60976.t1 AT5G02320 50.000 104 49 2 13 115 67 168 5.41e-28 113
MS.gene60976.t1 AT5G02320 28.926 121 84 2 13 132 15 134 1.49e-11 65.5
MS.gene60976.t1 AT1G69560 45.378 119 60 3 2 119 98 212 8.56e-28 110
MS.gene60976.t1 AT1G69560 45.378 119 60 3 2 119 114 228 1.10e-27 110
MS.gene60976.t1 AT3G09230 52.381 105 47 2 13 116 55 157 1.67e-27 110
MS.gene60976.t1 AT2G23290 51.961 102 48 1 13 114 13 113 2.13e-27 108
MS.gene60976.t1 AT5G58850 42.202 109 60 2 7 114 99 205 4.66e-27 110
MS.gene60976.t1 AT5G11510 45.614 114 58 2 10 120 78 190 4.80e-27 111
MS.gene60976.t1 AT5G11510 45.614 114 58 2 10 120 78 190 4.80e-27 111
MS.gene60976.t1 AT5G11510 45.614 114 58 2 10 120 78 190 4.80e-27 111
MS.gene60976.t1 AT5G11510 41.606 137 74 3 10 143 78 211 5.76e-27 111
MS.gene60976.t1 AT5G11510 41.606 137 74 3 10 143 78 211 6.30e-27 111
MS.gene60976.t1 AT3G53200 58.667 75 31 0 44 118 9 83 1.45e-26 104
MS.gene60976.t1 AT3G46130 58.333 72 30 0 43 114 9 80 1.78e-26 104
MS.gene60976.t1 AT1G18960 44.186 129 66 3 1 129 1 123 2.11e-26 106
MS.gene60976.t1 AT4G37260 47.664 107 55 1 13 119 13 118 2.31e-26 106
MS.gene60976.t1 AT5G11050 42.857 105 57 2 11 114 103 205 2.33e-26 108
MS.gene60976.t1 AT5G59780 59.155 71 29 0 44 114 20 90 3.27e-26 103
MS.gene60976.t1 AT4G18770 40.741 108 63 1 8 115 212 318 4.02e-26 107
MS.gene60976.t1 AT3G46130 59.155 71 29 0 44 114 20 90 4.97e-26 103
MS.gene60976.t1 AT1G26780 34.694 196 110 4 11 205 96 274 1.01e-25 103
MS.gene60976.t1 AT5G67300 48.039 102 52 1 13 114 6 106 1.49e-25 103
MS.gene60976.t1 AT4G32730 44.954 109 57 2 10 117 84 190 2.27e-25 106
MS.gene60976.t1 AT4G32730 44.954 109 57 2 10 117 84 190 2.30e-25 107
MS.gene60976.t1 AT4G32730 44.954 109 57 2 10 117 84 190 2.30e-25 107
MS.gene60976.t1 AT4G32730 44.954 109 57 2 10 117 84 190 2.30e-25 107
MS.gene60976.t1 AT4G32730 44.954 109 57 2 10 117 84 190 2.30e-25 107
MS.gene60976.t1 AT2G39880 46.903 113 56 3 7 118 45 154 2.34e-25 104
MS.gene60976.t1 AT1G26780 46.667 105 53 2 11 114 96 198 2.57e-25 104
MS.gene60976.t1 AT1G17950 47.573 103 51 2 13 114 5 105 3.80e-25 101
MS.gene60976.t1 AT4G33450 44.860 107 58 1 8 114 14 119 1.11e-24 100
MS.gene60976.t1 AT3G55730 49.074 108 51 3 8 114 52 156 1.12e-24 103
MS.gene60976.t1 AT3G50060 46.602 103 52 2 13 114 6 106 5.71e-24 99.8
MS.gene60976.t1 AT2G25230 38.710 124 71 3 8 128 21 142 9.20e-24 97.4
MS.gene60976.t1 AT3G29020 38.298 141 73 3 13 150 65 194 1.17e-23 97.4
MS.gene60976.t1 AT1G71030 50.000 78 39 0 50 127 5 82 1.71e-23 95.5
MS.gene60976.t1 AT3G23250 41.007 139 75 4 58 195 2 134 1.79e-23 96.7
MS.gene60976.t1 AT1G71030 50.000 78 39 0 50 127 19 96 1.90e-23 95.9
MS.gene60976.t1 AT3G29020 38.298 141 73 3 13 150 67 196 2.20e-23 98.2
MS.gene60976.t1 AT1G73410 47.573 103 51 2 13 114 6 106 4.71e-23 95.9
MS.gene60976.t1 AT1G73410 47.573 103 51 2 13 114 6 106 9.43e-23 94.0
MS.gene60976.t1 AT1G66380 55.844 77 34 0 38 114 2 78 1.61e-22 90.5
MS.gene60976.t1 AT5G17800 44.118 102 56 1 13 114 93 193 2.34e-22 95.5
MS.gene60976.t1 AT5G14750 62.069 58 22 0 58 115 2 59 3.96e-21 87.8
MS.gene60976.t1 AT5G14750 62.069 58 22 0 58 115 2 59 3.96e-21 87.8
MS.gene60976.t1 AT5G40430 39.450 109 62 3 6 113 47 152 1.18e-20 89.7
MS.gene60976.t1 AT2G02820 40.566 106 60 2 16 120 33 136 1.92e-20 90.5
MS.gene60976.t1 AT2G02820 38.333 120 69 3 4 120 19 136 3.73e-20 90.9
MS.gene60976.t1 AT2G02820 38.333 120 69 3 4 120 19 136 5.01e-20 90.5
MS.gene60976.t1 AT4G00540 43.119 109 56 3 11 115 101 207 7.99e-20 89.4
MS.gene60976.t1 AT4G00540 43.119 109 56 3 11 115 99 205 1.30e-19 89.0
MS.gene60976.t1 AT1G14350 40.566 106 60 2 16 120 28 131 2.38e-19 88.2
MS.gene60976.t1 AT1G14350 40.566 106 60 2 16 120 28 131 2.38e-19 88.2
MS.gene60976.t1 AT1G66380 46.341 82 44 0 7 88 4 85 7.63e-18 78.2
MS.gene60976.t1 AT2G37630 40.206 97 56 1 13 107 4 100 3.11e-17 81.6
MS.gene60976.t1 AT5G61420 50.000 80 35 2 80 154 2 81 1.27e-16 79.0
MS.gene60976.t1 AT5G39700 37.719 114 64 2 8 118 51 160 1.37e-16 77.0
MS.gene60976.t1 AT4G25560 63.462 52 18 1 70 120 3 54 2.02e-14 71.6
MS.gene60976.t1 AT1G22640 60.000 45 18 0 87 131 16 60 3.55e-13 67.4
MS.gene60976.t1 AT1G74430 52.000 50 24 0 76 125 8 57 1.05e-12 66.2
MS.gene60976.t1 AT1G14350 46.667 60 32 0 55 114 23 82 1.83e-12 67.8
MS.gene60976.t1 AT1G14350 46.667 60 32 0 55 114 23 82 1.83e-12 67.8
MS.gene60976.t1 AT5G59780 50.000 46 23 0 69 114 1 46 5.86e-12 63.5
MS.gene60976.t1 AT3G46130 50.000 46 23 0 69 114 1 46 1.14e-11 63.2
MS.gene60976.t1 AT4G28110 61.538 39 15 0 87 125 4 42 1.38e-11 63.2
MS.gene60976.t1 AT5G15310 61.538 39 15 0 87 125 9 47 1.70e-11 63.5
MS.gene60976.t1 AT3G18100 31.532 111 70 2 2 107 482 591 3.12e-11 64.7
MS.gene60976.t1 AT3G18100 32.673 101 65 3 16 115 450 548 5.38e-11 63.9
MS.gene60976.t1 AT3G18100 31.532 111 70 2 2 107 369 478 3.54e-11 64.3
MS.gene60976.t1 AT3G18100 32.673 101 65 3 16 115 337 435 6.57e-11 63.5
MS.gene60976.t1 AT3G18100 31.532 111 70 2 2 107 530 639 3.84e-11 64.3
MS.gene60976.t1 AT3G18100 32.673 101 65 3 16 115 498 596 5.68e-11 63.9
MS.gene60976.t1 AT3G18100 31.532 111 70 2 2 107 317 426 3.93e-11 64.3
MS.gene60976.t1 AT3G18100 32.673 101 65 3 16 115 285 383 7.98e-11 63.2
MS.gene60976.t1 AT1G74650 58.537 41 17 0 76 116 1 41 6.48e-11 62.0

Find 45 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAATTCTAACTTTGATTT+TGG 0.080150 2.1:+31944607 MS.gene60976:CDS
ATTTATATACCTGCAAATTT+TGG 0.137872 2.1:-31942585 None:intergenic
CAGGAAGGTGCTTTGCTATT+TGG 0.167836 2.1:-31944039 None:intergenic
AGGAAGGTGCTTTGCTATTT+GGG 0.225820 2.1:-31944038 None:intergenic
ATTGACATACATAGAATTCT+TGG 0.254609 2.1:+31943554 MS.gene60976:CDS
AACTCTTTCCACATCTTTGC+AGG 0.257084 2.1:-31943454 None:intergenic
TTGTGAACTAAGAATGAAAA+TGG 0.263875 2.1:-31944206 None:intergenic
TCAATGAGATAATTAGTATT+TGG 0.268636 2.1:-31944235 None:intergenic
CATTGAAAGATGTTTGATAT+TGG 0.327161 2.1:-31944333 None:intergenic
AAATTTGAGTTGTTTCTCTT+AGG 0.336904 2.1:-31944169 None:intergenic
AAAGATGTTTGATATTGGTT+AGG 0.341628 2.1:-31944328 None:intergenic
AGTTCTGTTCCAAAATTTGC+AGG 0.350597 2.1:+31942576 MS.gene60976:CDS
CCATATGCTATTCTCATTGC+AGG 0.361678 2.1:-31944437 None:intergenic
ACAAGCTTATCATCTTCTTC+AGG 0.367541 2.1:-31942519 None:intergenic
GAAAGTAAATTGTGAGTTTG+TGG 0.371752 2.1:-31944136 None:intergenic
TGGTTAGGGGAAACATTTGT+AGG 0.383380 2.1:-31944313 None:intergenic
ACTAAGAATGAAAATGGAAT+TGG 0.385324 2.1:-31944200 None:intergenic
TACATAGAATTCTTGGAAAC+AGG 0.385412 2.1:+31943561 MS.gene60976:CDS
AAGATGTTTGATATTGGTTA+GGG 0.398808 2.1:-31944327 None:intergenic
AAGGAGAAGATTTGTGAGAA+GGG 0.413880 2.1:+31944529 MS.gene60976:CDS
AGAAGATCAAAAGAGGATTA+TGG 0.415523 2.1:+31942493 MS.gene60976:CDS
CAAATAGCAAAGCACCTTCC+TGG 0.418082 2.1:+31944040 MS.gene60976:CDS
TTTCGAGGCAGTTCGTGCTC+GGG 0.427696 2.1:-31944379 None:intergenic
TCGGGAACAACGAGTTGATT+AGG 0.434836 2.1:-31944361 None:intergenic
AGCTCATGTGGAACAAGAAA+AGG 0.477629 2.1:+31944510 MS.gene60976:CDS
CTGTTCTTCTTCAGCAGTGA+AGG 0.479556 2.1:-31943525 None:intergenic
GAAGATTTGTGAGAAGGGAA+TGG 0.481113 2.1:+31944534 MS.gene60976:CDS
ATGAGATAATTAGTATTTGG+TGG 0.485047 2.1:-31944232 None:intergenic
AAAGGAGAAGATTTGTGAGA+AGG 0.488632 2.1:+31944528 MS.gene60976:CDS
CCTGCAATGAGAATAGCATA+TGG 0.492973 2.1:+31944437 MS.gene60976:CDS
CTGCAATGAGAATAGCATAT+GGG 0.510789 2.1:+31944438 MS.gene60976:CDS
GAAAGAGTTGCAGATTAAGA+TGG 0.516144 2.1:+31943468 MS.gene60976:CDS
AGAGGTTCAATGTTAGAAGA+AGG 0.517216 2.1:+31944481 MS.gene60976:CDS
TCTGCTTGCTGCAACAATGA+TGG 0.520800 2.1:-31942473 None:intergenic
ACTATATGAATCAACTTGCA+TGG 0.539760 2.1:+31944677 MS.gene60976:CDS
CCACTCATGGACATAAAAGC+TGG 0.540773 2.1:+31942553 MS.gene60976:CDS
AAAGAAGATATTGATATGAA+TGG 0.550253 2.1:+31944577 MS.gene60976:CDS
ACTTCATTGTCAGTTCTACC+AGG 0.555342 2.1:-31944058 None:intergenic
AGCAAGCAGAAGATCAAAAG+AGG 0.560509 2.1:+31942486 MS.gene60976:CDS
GTTACATATATCACCACTCA+TGG 0.572112 2.1:+31942540 MS.gene60976:CDS
TCAAGAGTTGATGATTGTAG+AGG 0.587417 2.1:+31944463 MS.gene60976:CDS
AGAAGGAACACAAGCTCATG+TGG 0.590709 2.1:+31944498 MS.gene60976:CDS
CATTGTCAGTTCTACCAGGA+AGG 0.595332 2.1:-31944054 None:intergenic
TATGCAGGCCTGCAAAGATG+TGG 0.603706 2.1:+31943446 MS.gene60976:intron
AGATGTTTGATATTGGTTAG+GGG 0.645618 2.1:-31944326 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATGAGTTAAAATTAA+AGG - chr2.1:31943718-31943737 None:intergenic 10.0%
!!! AATTGTTTTGTTTTTTTAGA+GGG + chr2.1:31943931-31943950 MS.gene60976:intron 15.0%
!!! CTTTTCAAAAAAAAAAAATG+CGG + chr2.1:31942944-31942963 MS.gene60976:intron 15.0%
!! AAAGAAGATATTGATATGAA+TGG + chr2.1:31944577-31944596 MS.gene60976:CDS 20.0%
!! GAAACCTCAAATTAATTTAT+TGG + chr2.1:31943353-31943372 MS.gene60976:intron 20.0%
!! TAATGAGTTAAAATTAAAGG+AGG - chr2.1:31943715-31943734 None:intergenic 20.0%
!! TCAATGAGATAATTAGTATT+TGG - chr2.1:31944238-31944257 None:intergenic 20.0%
!!! AATGCCAATAAATTAATTTG+AGG - chr2.1:31943360-31943379 None:intergenic 20.0%
!!! AGAATTCTAACTTTGATTTT+GGG + chr2.1:31944608-31944627 MS.gene60976:CDS 20.0%
!!! ATTGTTTTGTTTTTTTAGAG+GGG + chr2.1:31943932-31943951 MS.gene60976:intron 20.0%
!!! ATTTATATACCTGCAAATTT+TGG - chr2.1:31942588-31942607 None:intergenic 20.0%
!!! CGCATTTTTTTTTTTTGAAA+AGG - chr2.1:31942946-31942965 None:intergenic 20.0%
!!! GAATTGTTTTGTTTTTTTAG+AGG + chr2.1:31943930-31943949 MS.gene60976:intron 20.0%
!!! GTTTGAAGAATATTATTTTG+TGG - chr2.1:31944292-31944311 None:intergenic 20.0%
! ACTAAGAATGAAAATGGAAT+TGG - chr2.1:31944203-31944222 None:intergenic 25.0%
! ATGAGATAATTAGTATTTGG+TGG - chr2.1:31944235-31944254 None:intergenic 25.0%
! ATTGACATACATAGAATTCT+TGG + chr2.1:31943554-31943573 MS.gene60976:CDS 25.0%
! CATTGAAAGATGTTTGATAT+TGG - chr2.1:31944336-31944355 None:intergenic 25.0%
! GATTTCTCAAAATTTACTTG+CGG + chr2.1:31943617-31943636 MS.gene60976:intron 25.0%
! TTGTGAACTAAGAATGAAAA+TGG - chr2.1:31944209-31944228 None:intergenic 25.0%
!! AAAAAGAAGCTTATTTCTCA+AGG + chr2.1:31944106-31944125 MS.gene60976:CDS 25.0%
!! AAAGATGTTTGATATTGGTT+AGG - chr2.1:31944331-31944350 None:intergenic 25.0%
!! AAGATGTTTGATATTGGTTA+GGG - chr2.1:31944330-31944349 None:intergenic 25.0%
!! ACAATGAAGTGAAGAATTTT+TGG + chr2.1:31944071-31944090 MS.gene60976:CDS 25.0%
!!! AAATTTGAGTTGTTTCTCTT+AGG - chr2.1:31944172-31944191 None:intergenic 25.0%
!!! ATTTTGATTACCACACTTAA+AGG + chr2.1:31942810-31942829 MS.gene60976:intron 25.0%
!!! CTTTAAACACACTTTAAAAC+AGG - chr2.1:31942644-31942663 None:intergenic 25.0%
!!! GAGAATTCTAACTTTGATTT+TGG + chr2.1:31944607-31944626 MS.gene60976:CDS 25.0%
!!! TGAAGAATATTATTTTGTGG+AGG - chr2.1:31944289-31944308 None:intergenic 25.0%
AAAAAATATGATGCTAGCTG+TGG + chr2.1:31943416-31943435 MS.gene60976:intron 30.0%
AAAATTGTGAGAGGTCAAAT+AGG + chr2.1:31943815-31943834 MS.gene60976:intron 30.0%
AATTGAGCCCTTATATACAT+GGG - chr2.1:31943870-31943889 None:intergenic 30.0%
ACTATATGAATCAACTTGCA+TGG + chr2.1:31944677-31944696 MS.gene60976:CDS 30.0%
AGAAGATCAAAAGAGGATTA+TGG + chr2.1:31942493-31942512 MS.gene60976:CDS 30.0%
AGACACTTAAAAATTGTGAG+AGG + chr2.1:31943806-31943825 MS.gene60976:intron 30.0%
CAGCAATAGAAGAAAAACTT+AGG - chr2.1:31942867-31942886 None:intergenic 30.0%
CCTCAAAATGCTTTATATTG+CGG + chr2.1:31942988-31943007 MS.gene60976:intron 30.0%
GAAAGTAAATTGTGAGTTTG+TGG - chr2.1:31944139-31944158 None:intergenic 30.0%
GAATCCTTTGATGTGTTTAA+AGG + chr2.1:31942835-31942854 MS.gene60976:intron 30.0%
GTCTATAACTATTCTTAGAG+AGG + chr2.1:31943678-31943697 MS.gene60976:intron 30.0%
TACATAGAATTCTTGGAAAC+AGG + chr2.1:31943561-31943580 MS.gene60976:CDS 30.0%
TAGTAGTATAATATGAGTGC+TGG + chr2.1:31943973-31943992 MS.gene60976:intron 30.0%
! AGATGTTTGATATTGGTTAG+GGG - chr2.1:31944329-31944348 None:intergenic 30.0%
! ATTCTTGTCTAAGACTGAAT+CGG - chr2.1:31943644-31943663 None:intergenic 30.0%
!!! TAACTTTGATTTTGGGTTGT+TGG + chr2.1:31944615-31944634 MS.gene60976:CDS 30.0%
AAAGGAGAAGATTTGTGAGA+AGG + chr2.1:31944528-31944547 MS.gene60976:CDS 35.0%
AAGAATGAGAAACACTTGTG+CGG - chr2.1:31943300-31943319 None:intergenic 35.0%
AAGGAGAAGATTTGTGAGAA+GGG + chr2.1:31944529-31944548 MS.gene60976:CDS 35.0%
AAGGATTCAACCTTTAAGTG+TGG - chr2.1:31942823-31942842 None:intergenic 35.0%
AAGTTGGCCCATGTATATAA+GGG + chr2.1:31943860-31943879 MS.gene60976:intron 35.0%
ACAACTTGTGCTTATGATTG+AGG + chr2.1:31943086-31943105 MS.gene60976:intron 35.0%
ACAAGCTTATCATCTTCTTC+AGG - chr2.1:31942522-31942541 None:intergenic 35.0%
ACTGCCTTTAAACACATCAA+AGG - chr2.1:31942842-31942861 None:intergenic 35.0%
AGAGGTTCAATGTTAGAAGA+AGG + chr2.1:31944481-31944500 MS.gene60976:CDS 35.0%
AGTTCTGTTCCAAAATTTGC+AGG + chr2.1:31942576-31942595 MS.gene60976:CDS 35.0%
ATTATTTGTCTGCTGCAGAT+GGG + chr2.1:31944015-31944034 MS.gene60976:intron 35.0%
CAAACCAAAATTCTTGGTCT+TGG - chr2.1:31943154-31943173 None:intergenic 35.0%
CAATAAAAATCATGACGTCC+CGG - chr2.1:31943057-31943076 None:intergenic 35.0%
CACAATTGTGTGTTATGTGT+CGG + chr2.1:31943031-31943050 MS.gene60976:intron 35.0%
CTGCAATGAGAATAGCATAT+GGG + chr2.1:31944438-31944457 MS.gene60976:CDS 35.0%
GAAAGAGTTGCAGATTAAGA+TGG + chr2.1:31943468-31943487 MS.gene60976:CDS 35.0%
GAATTGAGCCCTTATATACA+TGG - chr2.1:31943871-31943890 None:intergenic 35.0%
GTGATCCACAACTGTAATTA+TGG - chr2.1:31943014-31943033 None:intergenic 35.0%
GTTACATATATCACCACTCA+TGG + chr2.1:31942540-31942559 MS.gene60976:CDS 35.0%
TCTCACATCTTTACTCGAAA+AGG + chr2.1:31942740-31942759 MS.gene60976:intron 35.0%
TGTGACCAAACCAAAATTCT+TGG - chr2.1:31943160-31943179 None:intergenic 35.0%
TTATATACATGGGCCAACTT+AGG - chr2.1:31943860-31943879 None:intergenic 35.0%
TTGAGACCAGATCTAAAAAG+AGG + chr2.1:31943500-31943519 MS.gene60976:CDS 35.0%
! AAGGAACCTCTTTTTAGATC+TGG - chr2.1:31943509-31943528 None:intergenic 35.0%
! ACGTTCTCAGTTAATTTTCG+AGG - chr2.1:31944397-31944416 None:intergenic 35.0%
! ATAGAGAGACGAATTTGTTC+TGG + chr2.1:31943737-31943756 MS.gene60976:intron 35.0%
! CTTTGAGAGAAAATCTTGTG+TGG + chr2.1:31943127-31943146 MS.gene60976:intron 35.0%
! GTTGAAACCATGATTTGTCT+CGG + chr2.1:31942690-31942709 MS.gene60976:intron 35.0%
! TAAGTTGGCCCATGTATATA+AGG + chr2.1:31943859-31943878 MS.gene60976:intron 35.0%
! TTCTTGTCTAAGACTGAATC+GGG - chr2.1:31943643-31943662 None:intergenic 35.0%
! TTGAAACCATGATTTGTCTC+GGG + chr2.1:31942691-31942710 MS.gene60976:intron 35.0%
!! CCGCAATATAAAGCATTTTG+AGG - chr2.1:31942991-31943010 None:intergenic 35.0%
!! TCAAGAGTTGATGATTGTAG+AGG + chr2.1:31944463-31944482 MS.gene60976:CDS 35.0%
!!! CAAGACCAAGAATTTTGGTT+TGG + chr2.1:31943152-31943171 MS.gene60976:intron 35.0%
!!! TTTTTTTTGAAAAGGCGTCC+TGG - chr2.1:31942938-31942957 None:intergenic 35.0%
AACTCTTTCCACATCTTTGC+AGG - chr2.1:31943457-31943476 None:intergenic 40.0%
ACTTCATTGTCAGTTCTACC+AGG - chr2.1:31944061-31944080 None:intergenic 40.0%
AGAGGTCAAATAGGTGTCAA+AGG + chr2.1:31943824-31943843 MS.gene60976:intron 40.0%
AGCAAGCAGAAGATCAAAAG+AGG + chr2.1:31942486-31942505 MS.gene60976:CDS 40.0%
AGCTCATGTGGAACAAGAAA+AGG + chr2.1:31944510-31944529 MS.gene60976:CDS 40.0%
CAAACCAAAATCCTTGGTCA+TGG + chr2.1:31943273-31943292 MS.gene60976:intron 40.0%
CATTATTTGTCTGCTGCAGA+TGG + chr2.1:31944014-31944033 MS.gene60976:intron 40.0%
CCATATGCTATTCTCATTGC+AGG - chr2.1:31944440-31944459 None:intergenic 40.0%
CCTGCAATGAGAATAGCATA+TGG + chr2.1:31944437-31944456 MS.gene60976:CDS 40.0%
GAAGATTTGTGAGAAGGGAA+TGG + chr2.1:31944534-31944553 MS.gene60976:CDS 40.0%
GAGGTCAAATAGGTGTCAAA+GGG + chr2.1:31943825-31943844 MS.gene60976:intron 40.0%
GTAAGAGTCAGACGTAATAG+TGG + chr2.1:31942762-31942781 MS.gene60976:intron 40.0%
TGGTTAGGGGAAACATTTGT+AGG - chr2.1:31944316-31944335 None:intergenic 40.0%
TGTGACCAAACCAAAATCCT+TGG + chr2.1:31943267-31943286 MS.gene60976:intron 40.0%
! CTTTGACTCTTTGTTTCTCC+AGG + chr2.1:31942917-31942936 MS.gene60976:intron 40.0%
! TGGACCAAGACCAAGAATTT+TGG + chr2.1:31943147-31943166 MS.gene60976:intron 40.0%
!! AGCTGTGGTTTGTTATATGC+AGG + chr2.1:31943431-31943450 MS.gene60976:intron 40.0%
!! AGGAAGGTGCTTTGCTATTT+GGG - chr2.1:31944041-31944060 None:intergenic 40.0%
!! CGGGACAACTACTTTTAATG+TGG + chr2.1:31942710-31942729 MS.gene60976:intron 40.0%
!!! CATGACCAAGGATTTTGGTT+TGG - chr2.1:31943275-31943294 None:intergenic 40.0%
AGAAGGAACACAAGCTCATG+TGG + chr2.1:31944498-31944517 MS.gene60976:CDS 45.0%
AGTTGTCCCGAGACAAATCA+TGG - chr2.1:31942700-31942719 None:intergenic 45.0%
CATTGTCAGTTCTACCAGGA+AGG - chr2.1:31944057-31944076 None:intergenic 45.0%
CCACTCATGGACATAAAAGC+TGG + chr2.1:31942553-31942572 MS.gene60976:CDS 45.0%
CTGTTCTTCTTCAGCAGTGA+AGG - chr2.1:31943528-31943547 None:intergenic 45.0%
GAGAGAAGAGAAGAGAGAGA+AGG + chr2.1:31943227-31943246 MS.gene60976:intron 45.0%
TATACATGGGCCAACTTAGG+TGG - chr2.1:31943857-31943876 None:intergenic 45.0%
TGCGGCCATAATTACAGTTG+TGG + chr2.1:31943006-31943025 MS.gene60976:intron 45.0%
! ATTGTGTGTTATGTGTCGGC+CGG + chr2.1:31943035-31943054 MS.gene60976:intron 45.0%
! CAAATAGCAAAGCACCTTCC+TGG + chr2.1:31944040-31944059 MS.gene60976:CDS 45.0%
! CCAGCTTTTATGTCCATGAG+TGG - chr2.1:31942556-31942575 None:intergenic 45.0%
! TCTGCTTGCTGCAACAATGA+TGG - chr2.1:31942476-31942495 None:intergenic 45.0%
!! CAGGAAGGTGCTTTGCTATT+TGG - chr2.1:31944042-31944061 None:intergenic 45.0%
!! TCGGGAACAACGAGTTGATT+AGG - chr2.1:31944364-31944383 None:intergenic 45.0%
AGGGTGTATGCCACCTAAGT+TGG + chr2.1:31943844-31943863 MS.gene60976:intron 50.0%
TATGCAGGCCTGCAAAGATG+TGG + chr2.1:31943446-31943465 MS.gene60976:intron 50.0%
! CGGACCATGACCAAGGATTT+TGG - chr2.1:31943280-31943299 None:intergenic 50.0%
! TTGTGTGTTATGTGTCGGCC+GGG + chr2.1:31943036-31943055 MS.gene60976:intron 50.0%
!! TTTTCGAGGCAGTTCGTGCT+CGG - chr2.1:31944383-31944402 None:intergenic 50.0%
ACTTGTGCGGACCATGACCA+AGG - chr2.1:31943287-31943306 None:intergenic 55.0%
TTTCGAGGCAGTTCGTGCTC+GGG - chr2.1:31944382-31944401 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 31942468 31944708 31942468 ID=MS.gene60976
chr2.1 mRNA 31942468 31944708 31942468 ID=MS.gene60976.t1;Parent=MS.gene60976
chr2.1 exon 31942468 31942597 31942468 ID=MS.gene60976.t1.exon1;Parent=MS.gene60976.t1
chr2.1 CDS 31942468 31942597 31942468 ID=cds.MS.gene60976.t1;Parent=MS.gene60976.t1
chr2.1 exon 31943453 31943582 31943453 ID=MS.gene60976.t1.exon2;Parent=MS.gene60976.t1
chr2.1 CDS 31943453 31943582 31943453 ID=cds.MS.gene60976.t1;Parent=MS.gene60976.t1
chr2.1 exon 31944033 31944708 31944033 ID=MS.gene60976.t1.exon3;Parent=MS.gene60976.t1
chr2.1 CDS 31944033 31944708 31944033 ID=cds.MS.gene60976.t1;Parent=MS.gene60976.t1
Gene Sequence

>MS.gene60976

ATGGGCCATCATTGTTGCAGCAAGCAGAAGATCAAAAGAGGATTATGGTCTCCTGAAGAAGATGATAAGCTTGTTACATATATCACCACTCATGGACATAAAAGCTGGAGTTCTGTTCCAAAATTTGCAGGTATATAAATTTCTTTCTTCTATACTTGTGAATTATTATTGTGCCTGTTTTAAAGTGTGTTTAAAGACTTTTATAAGTATGAGTATGCGTGTGTTGAAACCATGATTTGTCTCGGGACAACTACTTTTAATGTGGTTGATCTTCTCACATCTTTACTCGAAAAGGTAAGAGTCAGACGTAATAGTGGTTAAAATCGTGTTGCGTTTTGTTTGATTTTGATTACCACACTTAAAGGTTGAATCCTTTGATGTGTTTAAAGGCAGTTTCCTAAGTTTTTCTTCTATTGCTGCGTTTGCAGTGATTTTTTTGATGTAACATACTTTGACTCTTTGTTTCTCCAGGACGCCTTTTCAAAAAAAAAAAATGCGGTTCAAATTGTAGTTGCAGAAACCTCAAAATGCTTTATATTGCGGCCATAATTACAGTTGTGGATCACAATTGTGTGTTATGTGTCGGCCGGGACGTCATGATTTTTATTGTTTATGCAAACAACTTGTGCTTATGATTGAGGCAGCATTTGACTGCAATTCTTTGAGAGAAAATCTTGTGTGGACCAAGACCAAGAATTTTGGTTTGGTCACACACAAAGAGAGAAGAGCGAAGAGAGAGAAGAGAGAGCACATGTAGAAGAGAGAAGAGAAGAGAGAGAAGGAGAAAAACTTGTGTGTGTGTGACCAAACCAAAATCCTTGGTCATGGTCCGCACAAGTGTTTCTCATTCTTTGAAACATCAAGAATCATATGCAATTGTGTTATGAAACCTCAAATTAATTTATTGGCATTTCTTTTAGTTTCTTAGTGTGTTTGTGTGTATAGCAAAAAAAATATGATGCTAGCTGTGGTTTGTTATATGCAGGCCTGCAAAGATGTGGAAAGAGTTGCAGATTAAGATGGACAAACTATTTGAGACCAGATCTAAAAAGAGGTTCCTTCACTGCTGAAGAAGAACAGATCATAATTGACATACATAGAATTCTTGGAAACAGGTAAAGAGTAATAATAAAACTAAACAACAAATTTGATTTCTCAAAATTTACTTGCGGCCCGATTCAGTCTTAGACAAGAATTAATGTCGAAATTAGTCTATAACTATTCTTAGAGAGGAGAAATTAGTTCCTCCTTTAATTTTAACTCATTATAATAGAGAGACGAATTTGTTCTGGTACGAAGATATTAATTTGTATATTATTTTCGTCGTAGACTAAATTGAGACACTTAAAAATTGTGAGAGGTCAAATAGGTGTCAAAGGGTGTATGCCACCTAAGTTGGCCCATGTATATAAGGGCTCAATTCAATAATAGTTTCAACTAACAAGCACAAAGAGATGAGAGAGAATTGTTTTGTTTTTTTAGAGGGGAGAGAAAAATATTTGTAATAGTAGTATAATATGAGTGCTGGCATATTCATGAATGCATGCATTATTTGTCTGCTGCAGATGGGCCCAAATAGCAAAGCACCTTCCTGGTAGAACTGACAATGAAGTGAAGAATTTTTGGAACTCTTGCATTAAAAAGAAGCTTATTTCTCAAGGCTTAGATCCACAAACTCACAATTTACTTTCTTCTTCTCATCCTAAGAGAAACAACTCAAATTTTCAAAGTTCCAATTCCATTTTCATTCTTAGTTCACAAATGCCACCAAATACTAATTATCTCATTGAAACAACAAATCAAACTTTTTCATCACTACCTCCACAAAATAATATTCTTCAAACTCCTACAAATGTTTCCCCTAACCAATATCAAACATCTTTCAATGTACTTCCTAATCAACTCGTTGTTCCCGAGCACGAACTGCCTCGAAAATTAACTGAGAACGTATCAAACATTTGTTCTACTTCCTGCAATGAGAATAGCATATGGGTTTCAAGAGTTGATGATTGTAGAGGTTCAATGTTAGAAGAAGGAACACAAGCTCATGTGGAACAAGAAAAGGAGAAGATTTGTGAGAAGGGAATGGATGAAAAAGAAGTTAATGAGAAAGAAGATATTGATATGAATGGTTGTTTTGAGAATTCTAACTTTGATTTTGGGTTGTTGGAGAGTGTACTTAACTCTGAATTTATATCTCATGATCTAGACTATATGAATCAACTTGCATGGAACTTTTAA

Protein sequence

>MS.gene60976.t1

MGHHCCSKQKIKRGLWSPEEDDKLVTYITTHGHKSWSSVPKFAGLQRCGKSCRLRWTNYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHNLLSSSHPKRNNSNFQSSNSIFILSSQMPPNTNYLIETTNQTFSSLPPQNNILQTPTNVSPNQYQTSFNVLPNQLVVPEHELPRKLTENVSNICSTSCNENSIWVSRVDDCRGSMLEEGTQAHVEQEKEKICEKGMDEKEVNEKEDIDMNGCFENSNFDFGLLESVLNSEFISHDLDYMNQLAWNF