Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023146.t1 | XP_003608492.1 | 93 | 471 | 32 | 1 | 1 | 471 | 1 | 470 | 1.80E-242 | 848.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023146.t1 | P52410 | 87.0 | 409 | 53 | 0 | 63 | 471 | 65 | 473 | 1.0e-209 | 730.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023146.t1 | G7JDY8 | 93.0 | 471 | 32 | 1 | 1 | 471 | 1 | 470 | 1.3e-242 | 848.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46486 | MS.gene023146 | PPI |
| MS.gene006293 | MS.gene023146 | PPI |
| MS.gene24009 | MS.gene023146 | PPI |
| MS.gene89534 | MS.gene023146 | PPI |
| MS.gene94820 | MS.gene023146 | PPI |
| MS.gene034624 | MS.gene023146 | PPI |
| MS.gene49091 | MS.gene023146 | PPI |
| MS.gene023146 | MS.gene41434 | PPI |
| MS.gene023146 | MS.gene34495 | PPI |
| MS.gene038042 | MS.gene023146 | PPI |
| MS.gene39202 | MS.gene023146 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023146.t1 | MTR_4g096690 | 98.726 | 471 | 5 | 1 | 1 | 471 | 1 | 470 | 0.0 | 955 |
| MS.gene023146.t1 | MTR_1g103020 | 90.295 | 474 | 41 | 4 | 1 | 471 | 1 | 472 | 0.0 | 867 |
| MS.gene023146.t1 | MTR_8g099695 | 71.591 | 440 | 124 | 1 | 32 | 471 | 44 | 482 | 0.0 | 663 |
| MS.gene023146.t1 | MTR_8g099715 | 61.412 | 425 | 113 | 3 | 47 | 471 | 21 | 394 | 0.0 | 529 |
| MS.gene023146.t1 | MTR_2g043530 | 59.398 | 399 | 160 | 2 | 73 | 470 | 91 | 488 | 1.02e-173 | 497 |
| MS.gene023146.t1 | MTR_4g124880 | 59.250 | 400 | 159 | 4 | 73 | 470 | 94 | 491 | 2.53e-170 | 488 |
| MS.gene023146.t1 | MTR_2g043530 | 60.665 | 361 | 141 | 1 | 73 | 433 | 91 | 450 | 1.06e-160 | 462 |
| MS.gene023146.t1 | MTR_4g124880 | 60.519 | 347 | 133 | 4 | 126 | 470 | 1 | 345 | 1.89e-149 | 430 |
| MS.gene023146.t1 | MTR_8g099700 | 67.063 | 252 | 57 | 1 | 47 | 298 | 64 | 289 | 4.16e-117 | 345 |
| MS.gene023146.t1 | MTR_1g069385 | 39.631 | 434 | 235 | 7 | 59 | 467 | 37 | 468 | 1.90e-87 | 276 |
| MS.gene023146.t1 | MTR_1g069385 | 43.149 | 343 | 188 | 4 | 130 | 467 | 5 | 345 | 2.63e-81 | 256 |
| MS.gene023146.t1 | MTR_8g099705 | 74.590 | 122 | 31 | 0 | 328 | 449 | 1 | 122 | 1.34e-55 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023146.t1 | AT5G46290 | 80.882 | 476 | 83 | 3 | 1 | 471 | 1 | 473 | 0.0 | 786 |
| MS.gene023146.t1 | AT5G46290 | 78.252 | 492 | 83 | 4 | 1 | 471 | 1 | 489 | 0.0 | 776 |
| MS.gene023146.t1 | AT5G46290 | 69.748 | 476 | 81 | 5 | 1 | 471 | 1 | 418 | 0.0 | 647 |
| MS.gene023146.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 39 | 470 | 110 | 541 | 1.17e-167 | 483 |
| MS.gene023146.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 39 | 470 | 110 | 541 | 1.17e-167 | 483 |
| MS.gene023146.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 39 | 470 | 110 | 541 | 1.17e-167 | 483 |
| MS.gene023146.t1 | AT2G04540 | 40.230 | 435 | 230 | 12 | 59 | 468 | 31 | 460 | 7.55e-82 | 261 |
Find 138 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTATGCTATTACAAATA+TGG | 0.182977 | 4.3:-18940885 | MS.gene023146:CDS |
| TTGGGATTGATTTAGGTTTC+AGG | 0.183362 | 4.3:-18940850 | MS.gene023146:CDS |
| GCCATTATTCCTATTGGTTT+GGG | 0.188973 | 4.3:-18940710 | MS.gene023146:CDS |
| GGGCACTGCCTTGGCGCAGC+TGG | 0.190007 | 4.3:-18938699 | MS.gene023146:CDS |
| GCTTTACTTGGGATTGATTT+AGG | 0.219677 | 4.3:-18940857 | MS.gene023146:CDS |
| GCAGTTGAAATAGAATAATT+TGG | 0.222982 | 4.3:+18940824 | None:intergenic |
| CCAGGCATTTCAAATTCTTT+TGG | 0.230083 | 4.3:-18937786 | MS.gene023146:intron |
| GGAGAGTCTCTTTGGGGTTT+TGG | 0.230728 | 4.3:+18941460 | None:intergenic |
| TGCCATTATTCCTATTGGTT+TGG | 0.267531 | 4.3:-18940711 | MS.gene023146:CDS |
| GAGACGACGGAGAGTCTCTT+TGG | 0.301000 | 4.3:+18941452 | None:intergenic |
| TGCGAACCGAGTAGGGAATT+TGG | 0.306727 | 4.3:+18941262 | None:intergenic |
| ATGACCCTAAAACTGCTTCT+AGG | 0.311296 | 4.3:-18940649 | MS.gene023146:CDS |
| TCAAAATCAACTGCAGGTTC+TGG | 0.321272 | 4.3:+18937948 | None:intergenic |
| AGAGATTAATGCTATCAAAA+AGG | 0.331270 | 4.3:-18938894 | MS.gene023146:CDS |
| TTGGGATCCTTCTCTCTTTG+AGG | 0.337127 | 4.3:+18941407 | None:intergenic |
| GTGGGATCACATTGATTGAT+AGG | 0.337601 | 4.3:-18941295 | MS.gene023146:CDS |
| CTGTGATACCAGTCTATGAT+AGG | 0.352309 | 4.3:-18938720 | MS.gene023146:intron |
| AATATGGCTTCAGCTTTACT+TGG | 0.353169 | 4.3:-18940869 | MS.gene023146:CDS |
| GAAGCTGCCATTATTCCTAT+TGG | 0.362133 | 4.3:-18940716 | MS.gene023146:CDS |
| TGGGATTGATTTAGGTTTCA+GGG | 0.362251 | 4.3:-18940849 | MS.gene023146:CDS |
| ATCTTCAAGTGCTTTCTTCC+CGG | 0.364383 | 4.3:+18941151 | None:intergenic |
| TTTGGCGGTGGTGGTGGCGG+CGG | 0.369732 | 4.3:+18941478 | None:intergenic |
| GGGTGAAGGTGCTGGAGTTT+TGG | 0.370027 | 4.3:-18940594 | MS.gene023146:intron |
| TTTGTTATGGGTGAAGGTGC+TGG | 0.375390 | 4.3:-18940602 | MS.gene023146:CDS |
| ACCTATCATTGCTGAATACT+TGG | 0.377637 | 4.3:-18940202 | MS.gene023146:CDS |
| CCCCAAACCAATAGGAATAA+TGG | 0.379340 | 4.3:+18940709 | None:intergenic |
| AGACGACGGAGAGTCTCTTT+GGG | 0.379518 | 4.3:+18941453 | None:intergenic |
| CTCGCTTCATGGCATGTTCA+AGG | 0.383805 | 4.3:+18940229 | None:intergenic |
| GGCACTGCCTTGGCGCAGCT+GGG | 0.383994 | 4.3:-18938698 | MS.gene023146:CDS |
| GGTGGTGGTGGCGGCGGCAT+TGG | 0.384156 | 4.3:+18941484 | None:intergenic |
| AGTGATCACGACACGCTTCT+TGG | 0.384823 | 4.3:+18941388 | None:intergenic |
| CGTACGAATTGATTGATTGA+TGG | 0.387158 | 4.3:+18938624 | None:intergenic |
| TTCCACTCTTGTTGGTGACT+TGG | 0.387671 | 4.3:-18938918 | MS.gene023146:CDS |
| GATAGGTGCACCTCGCTTCA+TGG | 0.393092 | 4.3:+18940218 | None:intergenic |
| ATGCAGCCACCCTGTTGTTA+TGG | 0.398709 | 4.3:+18938647 | None:intergenic |
| TAAAGAACGTGCTGGTGTTT+TGG | 0.402018 | 4.3:-18940999 | MS.gene023146:CDS |
| ACAATAAAAGCCATAACAAC+AGG | 0.409441 | 4.3:-18938657 | MS.gene023146:CDS |
| GTCAGGAATGGGTGGTTTAA+CGG | 0.413571 | 4.3:-18940972 | MS.gene023146:CDS |
| CTAAAACTGCTTCTAGGCCT+TGG | 0.415317 | 4.3:-18940643 | MS.gene023146:CDS |
| GTGATCACGACACGCTTCTT+GGG | 0.422936 | 4.3:+18941389 | None:intergenic |
| CACTGCCTTGGCGCAGCTGG+GGG | 0.431565 | 4.3:-18938696 | MS.gene023146:CDS |
| CGGAGTGGTTCGAGTGGTGA+AGG | 0.433580 | 4.3:+18941518 | None:intergenic |
| CTCTCTTTGAGGAGCGGCAG+TGG | 0.435852 | 4.3:+18941418 | None:intergenic |
| GGTGGTGGCGGCGGCATTGG+AGG | 0.443199 | 4.3:+18941487 | None:intergenic |
| GCCATATTTGTAATAGCATA+AGG | 0.446803 | 4.3:+18940884 | None:intergenic |
| GTTAAGAATCTGATTGAAAA+GGG | 0.449404 | 4.3:-18940935 | MS.gene023146:CDS |
| CATGCAACTTCCACTCTTGT+TGG | 0.451361 | 4.3:-18938926 | MS.gene023146:CDS |
| GCACTGCCTTGGCGCAGCTG+GGG | 0.451754 | 4.3:-18938697 | MS.gene023146:CDS |
| ACGCCAAGCCCATCAGATCT+TGG | 0.452089 | 4.3:+18940141 | None:intergenic |
| AGTTAAGAATCTGATTGAAA+AGG | 0.455234 | 4.3:-18940936 | MS.gene023146:CDS |
| CTCCGGTACTGCAATGTCGC+CGG | 0.463407 | 4.3:-18941170 | MS.gene023146:CDS |
| TCCCGGCGACATTGCAGTAC+CGG | 0.468002 | 4.3:+18941168 | None:intergenic |
| TAAAACTGCTTCTAGGCCTT+GGG | 0.469150 | 4.3:-18940642 | MS.gene023146:CDS |
| CCCACCCGCAATCATCAAAT+CGG | 0.469221 | 4.3:+18940742 | None:intergenic |
| GGTGAAGGGCGGAGAGTGAA+GGG | 0.471647 | 4.3:+18941533 | None:intergenic |
| TTGGTTGGGTCAGGAATGGG+TGG | 0.473581 | 4.3:-18940980 | MS.gene023146:CDS |
| CCATTATTCCTATTGGTTTG+GGG | 0.476862 | 4.3:-18940709 | MS.gene023146:CDS |
| CTGCTGCCAATCACATTCGT+AGG | 0.477416 | 4.3:-18940772 | MS.gene023146:CDS |
| ATGACTGATCCAAGATCTGA+TGG | 0.479018 | 4.3:-18940150 | MS.gene023146:CDS |
| CATTATTCCTATTGGTTTGG+GGG | 0.482868 | 4.3:-18940708 | MS.gene023146:CDS |
| GAGGCCGATTTGATGATTGC+GGG | 0.483517 | 4.3:-18940746 | MS.gene023146:CDS |
| CCCAAGTATTCAGCAATGAT+AGG | 0.484502 | 4.3:+18940201 | None:intergenic |
| AAATTCCCTACTCGGTTCGC+AGG | 0.490002 | 4.3:-18941260 | MS.gene023146:CDS |
| CTCACCCCTACGAATGTGAT+TGG | 0.491901 | 4.3:+18940766 | None:intergenic |
| GATCCAAGATCTGATGGGCT+TGG | 0.498358 | 4.3:-18940144 | MS.gene023146:CDS |
| TGCTGCCAATCACATTCGTA+GGG | 0.501866 | 4.3:-18940771 | MS.gene023146:CDS |
| TCTGACCTGCGAACCGAGTA+GGG | 0.504912 | 4.3:+18941255 | None:intergenic |
| GCACTTGAAGATGCTGGTCT+CGG | 0.506363 | 4.3:-18941140 | MS.gene023146:CDS |
| TCCGGTACTGCAATGTCGCC+GGG | 0.507162 | 4.3:-18941169 | MS.gene023146:CDS |
| TTGAGGAGCGGCAGTGGTGA+CGG | 0.507766 | 4.3:+18941424 | None:intergenic |
| AAGAAGCGTGTCGTGATCAC+TGG | 0.508002 | 4.3:-18941386 | MS.gene023146:CDS |
| GAGTAAGACAATACCTCCTC+GGG | 0.513068 | 4.3:+18940075 | None:intergenic |
| ATGCTTCCAAATTCCCTACT+CGG | 0.516081 | 4.3:-18941268 | MS.gene023146:CDS |
| CAGCAGCATGAAATTAATGT+TGG | 0.518157 | 4.3:-18937906 | MS.gene023146:intron |
| AGCTTCTCGCCGGTGAGAGT+GGG | 0.518796 | 4.3:-18941313 | MS.gene023146:CDS |
| TGAGGCCGATTTGATGATTG+CGG | 0.522914 | 4.3:-18940747 | MS.gene023146:CDS |
| AAGAAAGCACTTGAAGATGC+TGG | 0.527588 | 4.3:-18941146 | MS.gene023146:CDS |
| AGCTCTGAGGGTTACATCGA+CGG | 0.529142 | 4.3:-18941221 | MS.gene023146:CDS |
| CGGCGTCTACAAGACTGCTC+TGG | 0.531158 | 4.3:+18940106 | None:intergenic |
| CGGGAAGAATGACCGGAGAC+AGG | 0.533743 | 4.3:-18941201 | MS.gene023146:CDS |
| ATCCGTGGGTTTAGCTCTGA+GGG | 0.533824 | 4.3:-18941233 | MS.gene023146:CDS |
| AAGCTTCTCGCCGGTGAGAG+TGG | 0.533893 | 4.3:-18941314 | MS.gene023146:CDS |
| ATATGGCTTCAGCTTTACTT+GGG | 0.536843 | 4.3:-18940868 | MS.gene023146:CDS |
| ATTATTCCTATTGGTTTGGG+GGG | 0.537089 | 4.3:-18940707 | MS.gene023146:CDS |
| CAATGTGATCCCACTCTCAC+CGG | 0.537398 | 4.3:+18941304 | None:intergenic |
| GCTCTGAGGGTTACATCGAC+GGG | 0.540385 | 4.3:-18941220 | MS.gene023146:CDS |
| GACGACGGAGAGTCTCTTTG+GGG | 0.543879 | 4.3:+18941454 | None:intergenic |
| GATCCGTGGGTTTAGCTCTG+AGG | 0.548499 | 4.3:-18941234 | MS.gene023146:CDS |
| GGTTCGCAGGTCAGATCCGT+GGG | 0.552078 | 4.3:-18941247 | MS.gene023146:CDS |
| CGGTGCCGAAAATCTCGATA+AGG | 0.557505 | 4.3:-18941120 | MS.gene023146:intron |
| CGGTTCGCAGGTCAGATCCG+TGG | 0.558021 | 4.3:-18941248 | MS.gene023146:CDS |
| AGAGTAAGACAATACCTCCT+CGG | 0.558328 | 4.3:+18940074 | None:intergenic |
| GGGATTGATTTAGGTTTCAG+GGG | 0.561124 | 4.3:-18940848 | MS.gene023146:CDS |
| ATGGGTGGCGTCACTGTACA+TGG | 0.561821 | 4.3:-18941362 | MS.gene023146:CDS |
| TGGTGAAGGGCGGAGAGTGA+AGG | 0.562830 | 4.3:+18941532 | None:intergenic |
| GGAGACAATCATCCTGTCTC+CGG | 0.564955 | 4.3:+18941189 | None:intergenic |
| GCCGATTTGATGATTGCGGG+TGG | 0.565161 | 4.3:-18940743 | MS.gene023146:CDS |
| CAATCACATTCGTAGGGGTG+AGG | 0.569075 | 4.3:-18940765 | MS.gene023146:CDS |
| AATCAGATTCTTAACTCCGT+CGG | 0.570042 | 4.3:+18940943 | None:intergenic |
| CCTATCATTGCTGAATACTT+GGG | 0.577362 | 4.3:-18940201 | MS.gene023146:CDS |
| ACGGTATCAAAATCAACTGC+AGG | 0.580461 | 4.3:+18937942 | None:intergenic |
| ACATCGACGGGAAGAATGAC+CGG | 0.581180 | 4.3:-18941208 | MS.gene023146:CDS |
| TGCCGCTCCTCAAAGAGAGA+AGG | 0.582705 | 4.3:-18941414 | MS.gene023146:CDS |
| TGCCAAGTCACCAACAAGAG+TGG | 0.586198 | 4.3:+18938916 | None:intergenic |
| TTCTACGAGAAGCTTCTCGC+CGG | 0.588660 | 4.3:-18941323 | MS.gene023146:CDS |
| TACCTCCTCGGGTGACACAC+CGG | 0.588795 | 4.3:+18940086 | None:intergenic |
| TGGTGGACACAACTCTGTCG+TGG | 0.588850 | 4.3:-18937760 | MS.gene023146:CDS |
| CTGCTGCTTGACATTTGCCA+CGG | 0.591270 | 4.3:+18937923 | None:intergenic |
| TCTATGATAGGGCACTGCCT+TGG | 0.593139 | 4.3:-18938708 | MS.gene023146:CDS |
| GCGTGTCGTGATCACTGGCA+TGG | 0.595938 | 4.3:-18941381 | MS.gene023146:CDS |
| ATGACATGATAATACCTTGG+TGG | 0.597289 | 4.3:+18938838 | None:intergenic |
| CGTGTCGTGATCACTGGCAT+GGG | 0.597426 | 4.3:-18941380 | MS.gene023146:CDS |
| GTCGTGATCACTGGCATGGG+TGG | 0.597540 | 4.3:-18941377 | MS.gene023146:CDS |
| CCGATTTGATGATTGCGGGT+GGG | 0.602467 | 4.3:-18940742 | MS.gene023146:CDS |
| TGTGATACCAGTCTATGATA+GGG | 0.603213 | 4.3:-18938719 | MS.gene023146:intron |
| ATCCTTCTCTCTTTGAGGAG+CGG | 0.604302 | 4.3:+18941412 | None:intergenic |
| GGAGTGGTTCGAGTGGTGAA+GGG | 0.605118 | 4.3:+18941519 | None:intergenic |
| ATCTGACCTGCGAACCGAGT+AGG | 0.609425 | 4.3:+18941254 | None:intergenic |
| GGAGACAGGATGATTGTCTC+CGG | 0.614203 | 4.3:-18941187 | MS.gene023146:CDS |
| CATCAAAATTAATGCCACCA+AGG | 0.623828 | 4.3:-18938852 | MS.gene023146:intron |
| CCATCACGGTCTTTATCCCA+AGG | 0.625058 | 4.3:+18940626 | None:intergenic |
| CCTTGGGATAAAGACCGTGA+TGG | 0.627148 | 4.3:-18940626 | MS.gene023146:CDS |
| CTTGAACATGCCATGAAGCG+AGG | 0.627955 | 4.3:-18940228 | MS.gene023146:CDS |
| CGCCGGTGTGTCACCCGAGG+AGG | 0.641700 | 4.3:-18940088 | MS.gene023146:intron |
| TGGCAATCAGGGTCTGAAAG+CGG | 0.643041 | 4.3:+18937731 | None:intergenic |
| TAGATTGATAAAGAACGTGC+TGG | 0.644130 | 4.3:-18941007 | MS.gene023146:CDS |
| TGACTGATCCAAGATCTGAT+GGG | 0.646479 | 4.3:-18940149 | MS.gene023146:CDS |
| AGACGCCGGTGTGTCACCCG+AGG | 0.647368 | 4.3:-18940091 | MS.gene023146:CDS |
| AGGAGCGGCAGTGGTGACGG+CGG | 0.651078 | 4.3:+18941427 | None:intergenic |
| ATCATTGCTGAATACTTGGG+AGG | 0.652856 | 4.3:-18940198 | MS.gene023146:CDS |
| CAGAGCAGTCTTGTAGACGC+CGG | 0.652992 | 4.3:-18940105 | MS.gene023146:CDS |
| GTGGTTCGAGTGGTGAAGGG+CGG | 0.658669 | 4.3:+18941522 | None:intergenic |
| GGTGACGGCGGAAGAGACGA+CGG | 0.668181 | 4.3:+18941439 | None:intergenic |
| CACCCATAACAAAACCATCA+CGG | 0.674295 | 4.3:+18940612 | None:intergenic |
| CAATAAAAGCCATAACAACA+GGG | 0.677458 | 4.3:-18938656 | MS.gene023146:CDS |
| AACCCTCAGAGCTAAACCCA+CGG | 0.685542 | 4.3:+18941231 | None:intergenic |
| GCTGCCAATCACATTCGTAG+GGG | 0.729757 | 4.3:-18940770 | MS.gene023146:CDS |
| TAAAAGCCATAACAACAGGG+TGG | 0.762513 | 4.3:-18938653 | MS.gene023146:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTCAATTACATAAATT+AGG | - | chr4.3:18939562-18939581 | MS.gene023146:intron | 10.0% |
| !! | TTTAATAAAAGTTAAATAAC+AGG | + | chr4.3:18940931-18940950 | None:intergenic | 10.0% |
| !!! | AACTTTTATATTGTTAATTA+AGG | + | chr4.3:18938784-18938803 | None:intergenic | 10.0% |
| !!! | AATATATTTAAAACATCAAT+CGG | - | chr4.3:18939918-18939937 | MS.gene023146:intron | 10.0% |
| !! | AAAATATTAATCAGACATTA+AGG | + | chr4.3:18940109-18940128 | None:intergenic | 15.0% |
| !! | ATAAATAAGGTTATATTGAA+CGG | + | chr4.3:18940897-18940916 | None:intergenic | 15.0% |
| !! | ATTAATTATAATTCTTACGA+AGG | + | chr4.3:18940997-18941016 | None:intergenic | 15.0% |
| !! | TTAAATATATTCTAATCACA+AGG | + | chr4.3:18939909-18939928 | None:intergenic | 15.0% |
| !!! | AATTTGCTTATAAAAAGAAA+CGG | + | chr4.3:18940280-18940261 | None:intergenic | 15.0% |
| !!! | AATTTGCTTATAAAAAGAAA+TGG | - | chr4.3:18940261-18940280 | MS.gene023146:intron | 15.0% |
| !!! | CCTGTTTTTTTTTTTTTTTT+GGG | - | chr4.3:18938980-18938999 | MS.gene023146:intron | 15.0% |
| !!! | GATTTAGAATTATTCTTTTT+TGG | + | chr4.3:18938919-18938938 | None:intergenic | 15.0% |
| !!! | TCCTGTTTTTTTTTTTTTTT+TGG | - | chr4.3:18938979-18938998 | MS.gene023146:intron | 15.0% |
| !!! | TTCAATATAACCTTATTTAT+TGG | - | chr4.3:18940897-18940916 | MS.gene023146:CDS | 15.0% |
| !! | AAAAAAATCCAAATCCAATT+AGG | + | chr4.3:18938258-18938277 | None:intergenic | 20.0% |
| !! | AAAAAATCCAAATCCAATTA+GGG | + | chr4.3:18938257-18938276 | None:intergenic | 20.0% |
| !! | AGAAAAGCAATGAATTAAAT+GGG | + | chr4.3:18939302-18939321 | None:intergenic | 20.0% |
| !! | AGAACAATAACAAATCATTA+AGG | + | chr4.3:18938746-18938765 | None:intergenic | 20.0% |
| !! | ATAAAAGTTAAATAACAGGT+TGG | + | chr4.3:18940927-18940946 | None:intergenic | 20.0% |
| !! | ATAGCATAAGGAATAAAAAA+AGG | + | chr4.3:18938401-18938420 | None:intergenic | 20.0% |
| !! | CCCAAAAAAAAAAAAAAAAC+AGG | + | chr4.3:18938983-18939002 | None:intergenic | 20.0% |
| !! | TAAAAGTTAAATAACAGGTT+GGG | + | chr4.3:18940926-18940945 | None:intergenic | 20.0% |
| !! | TATATGAACTATCATGTTAT+TGG | - | chr4.3:18941141-18941160 | MS.gene023146:CDS | 20.0% |
| !! | TTAGTAAAATCAAAAACAGT+TGG | + | chr4.3:18939789-18939808 | None:intergenic | 20.0% |
| !!! | AATTCTTGTTTTTCATGATT+AGG | - | chr4.3:18940700-18940719 | MS.gene023146:CDS | 20.0% |
| !!! | ATGATTTGTTATTGTTCTTT+TGG | - | chr4.3:18938748-18938767 | MS.gene023146:intron | 20.0% |
| !!! | ATTTCAAATTCTTTTGGATT+TGG | - | chr4.3:18941514-18941533 | MS.gene023146:CDS | 20.0% |
| ! | AAAAGTTAAATAACAGGTTG+GGG | + | chr4.3:18940925-18940944 | None:intergenic | 25.0% |
| ! | AGAAAACGTAAAAGAAGAAA+AGG | - | chr4.3:18939693-18939712 | MS.gene023146:intron | 25.0% |
| ! | AGAGATTAATGCTATCAAAA+AGG | - | chr4.3:18940400-18940419 | MS.gene023146:intron | 25.0% |
| ! | AGTTAAGAATCTGATTGAAA+AGG | - | chr4.3:18938358-18938377 | MS.gene023146:intron | 25.0% |
| ! | ATGTATGTGGTTCATAATAT+GGG | + | chr4.3:18940214-18940233 | None:intergenic | 25.0% |
| ! | ATTTAGTGGTATGATAAAAC+TGG | - | chr4.3:18939670-18939689 | MS.gene023146:intron | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | - | chr4.3:18940188-18940207 | MS.gene023146:CDS | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | + | chr4.3:18940207-18940188 | None:intergenic | 25.0% |
| ! | CTTTCACTTTGCTAATTTAT+GGG | + | chr4.3:18940308-18940327 | None:intergenic | 25.0% |
| ! | GAGAAAAGCAATGAATTAAA+TGG | + | chr4.3:18939303-18939322 | None:intergenic | 25.0% |
| ! | GCAAACAAAATGATTACATA+TGG | + | chr4.3:18941304-18941323 | None:intergenic | 25.0% |
| ! | GCAGTTGAAATAGAATAATT+TGG | + | chr4.3:18938473-18938492 | None:intergenic | 25.0% |
| ! | GTTAAGAATCTGATTGAAAA+GGG | - | chr4.3:18938359-18938378 | MS.gene023146:intron | 25.0% |
| ! | TATAAACTGATTATTTGCAG+AGG | + | chr4.3:18939968-18939987 | None:intergenic | 25.0% |
| ! | TATATCTGAATTGAACTGAA+CGG | - | chr4.3:18938229-18938248 | MS.gene023146:intron | 25.0% |
| ! | TCCTTATGCTATTACAAATA+TGG | - | chr4.3:18938409-18938428 | MS.gene023146:intron | 25.0% |
| ! | TGCTTATAAAAAGAAATGGA+GGG | - | chr4.3:18940265-18940284 | MS.gene023146:intron | 25.0% |
| ! | TTAATGATTTCTTTACTGTG+TGG | - | chr4.3:18941012-18941031 | MS.gene023146:intron | 25.0% |
| ! | TTGCTTATAAAAAGAAATGG+AGG | - | chr4.3:18940264-18940283 | MS.gene023146:intron | 25.0% |
| !! | AAATTTATAGCATTGAGTTC+TGG | - | chr4.3:18939507-18939526 | MS.gene023146:intron | 25.0% |
| !! | AACATATCATATCCTTTTAC+TGG | - | chr4.3:18941256-18941275 | MS.gene023146:CDS | 25.0% |
| !! | TACTATAACTTTAAAGGTGA+TGG | - | chr4.3:18939038-18939057 | MS.gene023146:intron | 25.0% |
| !! | TTAAACCTTATCGAGATTTT+CGG | + | chr4.3:18938182-18938201 | None:intergenic | 25.0% |
| !!! | ATACAGAAATTAACTTGTAG+AGG | + | chr4.3:18939007-18939026 | None:intergenic | 25.0% |
| AAAAATAGAGTAAGCTGGAA+AGG | + | chr4.3:18939341-18939360 | None:intergenic | 30.0% | |
| AAAACATCAATCGGATGTAA+GGG | - | chr4.3:18939927-18939946 | MS.gene023146:intron | 30.0% | |
| AACAGAAAAATAGAGTAAGC+TGG | + | chr4.3:18939346-18939365 | None:intergenic | 30.0% | |
| ACAATAAAAGCCATAACAAC+AGG | - | chr4.3:18940637-18940656 | MS.gene023146:CDS | 30.0% | |
| ACGTGATAAAGACCATAATT+TGG | - | chr4.3:18941453-18941472 | MS.gene023146:CDS | 30.0% | |
| ATAAAGACCATAATTTGGAC+TGG | - | chr4.3:18941458-18941477 | MS.gene023146:CDS | 30.0% | |
| ATTAGAATCAACTGAGAGAA+TGG | - | chr4.3:18940737-18940756 | MS.gene023146:CDS | 30.0% | |
| ATTATTGAAGGGAGAAACTA+AGG | - | chr4.3:18939741-18939760 | MS.gene023146:intron | 30.0% | |
| CAATAAAAGCCATAACAACA+GGG | - | chr4.3:18940638-18940657 | MS.gene023146:CDS | 30.0% | |
| GATGTATGTGGTTCATAATA+TGG | + | chr4.3:18940215-18940234 | None:intergenic | 30.0% | |
| GCCATATTTGTAATAGCATA+AGG | + | chr4.3:18938413-18938432 | None:intergenic | 30.0% | |
| GCTTTCACTTTGCTAATTTA+TGG | + | chr4.3:18940309-18940328 | None:intergenic | 30.0% | |
| GGGTTTCATTTCTAATCATA+TGG | - | chr4.3:18941210-18941229 | MS.gene023146:CDS | 30.0% | |
| TAAAACATCAATCGGATGTA+AGG | - | chr4.3:18939926-18939945 | MS.gene023146:intron | 30.0% | |
| TGCTTATAAAAAGAAACGGA+GGG | + | chr4.3:18940150-18940169 | None:intergenic | 30.0% | |
| TTAGAATCAACTGAGAGAAT+GGG | - | chr4.3:18940738-18940757 | MS.gene023146:CDS | 30.0% | |
| TTAGTTACCAGTCCAAATTA+TGG | + | chr4.3:18941468-18941487 | None:intergenic | 30.0% | |
| TTGCTTATAAAAAGAAACGG+AGG | + | chr4.3:18940151-18940170 | None:intergenic | 30.0% | |
| ! | AAGTGGAAAGACAATTTGTT+AGG | - | chr4.3:18940045-18940064 | MS.gene023146:intron | 30.0% |
| ! | ATGAAAGTTAATTTGAGACC+AGG | + | chr4.3:18940833-18940852 | None:intergenic | 30.0% |
| ! | TCAAATTCTTTTGGATTTGG+TGG | - | chr4.3:18941517-18941536 | MS.gene023146:CDS | 30.0% |
| ! | TGTGTGTTTTCAACATCTTT+TGG | - | chr4.3:18939385-18939404 | MS.gene023146:intron | 30.0% |
| ! | TGTTGTTATGGCTTTTATTG+TGG | + | chr4.3:18940638-18940657 | None:intergenic | 30.0% |
| ! | TTTCAACATCTTTTGGTACA+CGG | - | chr4.3:18939392-18939411 | MS.gene023146:intron | 30.0% |
| !! | ATAGTGAGAGCATTATTGAA+GGG | - | chr4.3:18939730-18939749 | MS.gene023146:intron | 30.0% |
| !! | CATGTCATTTGCTTCTTTTT+AGG | - | chr4.3:18940328-18940347 | MS.gene023146:intron | 30.0% |
| !! | CATTAATTTTGATGCCAGAA+GGG | + | chr4.3:18940436-18940455 | None:intergenic | 30.0% |
| !! | CGAGAGTACTATAACTTTAA+AGG | - | chr4.3:18939032-18939051 | MS.gene023146:intron | 30.0% |
| !! | TGATTACATATGGTTCTGAA+AGG | + | chr4.3:18941294-18941313 | None:intergenic | 30.0% |
| !! | TGTAATCATTTTGTTTGCCT+TGG | - | chr4.3:18941306-18941325 | MS.gene023146:CDS | 30.0% |
| !!! | CTTTTTTGGATCATGTACAA+AGG | + | chr4.3:18938905-18938924 | None:intergenic | 30.0% |
| !!! | GTTATTTTTGATTCATTCCC+TGG | - | chr4.3:18940527-18940546 | MS.gene023146:intron | 30.0% |
| AAACATCAATCGGATGTAAG+GGG | - | chr4.3:18939928-18939947 | MS.gene023146:intron | 35.0% | |
| AAACTGATTATTTGCAGAGG+AGG | + | chr4.3:18939965-18939984 | None:intergenic | 35.0% | |
| AAGCTGCTAGCATAAATAAG+TGG | - | chr4.3:18940028-18940047 | MS.gene023146:intron | 35.0% | |
| AATATGGCTTCAGCTTTACT+TGG | - | chr4.3:18938425-18938444 | MS.gene023146:intron | 35.0% | |
| AATCAGATTCTTAACTCCGT+CGG | + | chr4.3:18938354-18938373 | None:intergenic | 35.0% | |
| ACAGCATATGCATCAGTTAA+TGG | + | chr4.3:18940553-18940572 | None:intergenic | 35.0% | |
| ACCACGTGAGTAAAAAGAAA+AGG | + | chr4.3:18941101-18941120 | None:intergenic | 35.0% | |
| ACCTATCATTGCTGAATACT+TGG | - | chr4.3:18939092-18939111 | MS.gene023146:intron | 35.0% | |
| ACGTGAAATGAAAAATGCAC+TGG | + | chr4.3:18941437-18941456 | None:intergenic | 35.0% | |
| ATAAAACAGAAAGCTTTCGC+TGG | + | chr4.3:18940495-18940514 | None:intergenic | 35.0% | |
| ATATGGCTTCAGCTTTACTT+GGG | - | chr4.3:18938426-18938445 | MS.gene023146:intron | 35.0% | |
| ATGACATGATAATACCTTGG+TGG | + | chr4.3:18940459-18940478 | None:intergenic | 35.0% | |
| CAGCAGCATGAAATTAATGT+TGG | - | chr4.3:18941388-18941407 | MS.gene023146:CDS | 35.0% | |
| CATCAAAATTAATGCCACCA+AGG | - | chr4.3:18940442-18940461 | MS.gene023146:intron | 35.0% | |
| CATTCATCAGGTCAAATAGA+GGG | - | chr4.3:18940002-18940021 | MS.gene023146:intron | 35.0% | |
| CCTATCATTGCTGAATACTT+GGG | - | chr4.3:18939093-18939112 | MS.gene023146:intron | 35.0% | |
| CGTACGAATTGATTGATTGA+TGG | + | chr4.3:18940673-18940692 | None:intergenic | 35.0% | |
| TAGATTGATAAAGAACGTGC+TGG | - | chr4.3:18938287-18938306 | MS.gene023146:intron | 35.0% | |
| TAGTTACTTGCTCATTCATC+AGG | - | chr4.3:18939990-18940009 | MS.gene023146:intron | 35.0% | |
| TCATTCATCAGGTCAAATAG+AGG | - | chr4.3:18940001-18940020 | MS.gene023146:intron | 35.0% | |
| TCCATGACATGATAATACCT+TGG | + | chr4.3:18940462-18940481 | None:intergenic | 35.0% | |
| TGATGAATGAGCAAGTAACT+AGG | + | chr4.3:18939991-18940010 | None:intergenic | 35.0% | |
| TGCCTGGAAGAAAGAAAAAA+AGG | + | chr4.3:18941495-18941514 | None:intergenic | 35.0% | |
| TGTGATACCAGTCTATGATA+GGG | - | chr4.3:18940575-18940594 | MS.gene023146:intron | 35.0% | |
| ! | ACCAAGGTATTATCATGTCA+TGG | - | chr4.3:18940458-18940477 | MS.gene023146:intron | 35.0% |
| ! | ACCTTTTCTTTTTACTCACG+TGG | - | chr4.3:18941097-18941116 | MS.gene023146:intron | 35.0% |
| ! | AGAGAATGGGCTTTCATTAT+TGG | - | chr4.3:18940751-18940770 | MS.gene023146:CDS | 35.0% |
| ! | CCAAAAGAATTTGAAATGCC+TGG | + | chr4.3:18941511-18941530 | None:intergenic | 35.0% |
| ! | CCAGGCATTTCAAATTCTTT+TGG | - | chr4.3:18941508-18941527 | MS.gene023146:CDS | 35.0% |
| ! | GCTTTACTTGGGATTGATTT+AGG | - | chr4.3:18938437-18938456 | MS.gene023146:intron | 35.0% |
| ! | TCTGTTTTATAGATCATCGC+AGG | - | chr4.3:18940505-18940524 | MS.gene023146:intron | 35.0% |
| ! | TGCCATTATTCCTATTGGTT+TGG | - | chr4.3:18938583-18938602 | MS.gene023146:intron | 35.0% |
| ! | TGGGATTGATTTAGGTTTCA+GGG | - | chr4.3:18938445-18938464 | MS.gene023146:intron | 35.0% |
| ! | TGTCTTGTATTTCTGCATAC+TGG | - | chr4.3:18939824-18939843 | MS.gene023146:intron | 35.0% |
| ! | TTGGGATTGATTTAGGTTTC+AGG | - | chr4.3:18938444-18938463 | MS.gene023146:intron | 35.0% |
| ! | TTTCACGAAGTGTCTATAAG+TGG | - | chr4.3:18938942-18938961 | MS.gene023146:CDS | 35.0% |
| ! | TTTTGGTACACGGTACAATA+GGG | - | chr4.3:18939402-18939421 | MS.gene023146:intron | 35.0% |
| !! | AATTTGGACTGGTAACTAAC+TGG | - | chr4.3:18941469-18941488 | MS.gene023146:CDS | 35.0% |
| !! | ATGGTTCTGAAAGGCAAAAT+AGG | + | chr4.3:18941285-18941304 | None:intergenic | 35.0% |
| !! | ATTATTCCTATTGGTTTGGG+GGG | - | chr4.3:18938587-18938606 | MS.gene023146:intron | 35.0% |
| !! | CATAGTGAGAGCATTATTGA+AGG | - | chr4.3:18939729-18939748 | MS.gene023146:intron | 35.0% |
| !! | CATTATTCCTATTGGTTTGG+GGG | - | chr4.3:18938586-18938605 | MS.gene023146:intron | 35.0% |
| !! | CCATTATTCCTATTGGTTTG+GGG | - | chr4.3:18938585-18938604 | MS.gene023146:intron | 35.0% |
| !! | GCATTAATTTTGATGCCAGA+AGG | + | chr4.3:18940437-18940456 | None:intergenic | 35.0% |
| !! | GCCATTATTCCTATTGGTTT+GGG | - | chr4.3:18938584-18938603 | MS.gene023146:intron | 35.0% |
| AACGGATCCCTAATTGGATT+TGG | - | chr4.3:18938247-18938266 | MS.gene023146:intron | 40.0% | |
| ACGGTATCAAAATCAACTGC+AGG | + | chr4.3:18941355-18941374 | None:intergenic | 40.0% | |
| ACTATGGCGTTAGCATTTAG+TGG | - | chr4.3:18939656-18939675 | MS.gene023146:intron | 40.0% | |
| AGAGTAAGACAATACCTCCT+CGG | + | chr4.3:18939223-18939242 | None:intergenic | 40.0% | |
| ATATGCATCAGTTAATGGCC+AGG | + | chr4.3:18940548-18940567 | None:intergenic | 40.0% | |
| ATCATTGCTGAATACTTGGG+AGG | - | chr4.3:18939096-18939115 | MS.gene023146:intron | 40.0% | |
| ATCTTCAAGTGCTTTCTTCC+CGG | + | chr4.3:18938146-18938165 | None:intergenic | 40.0% | |
| ATGACCCTAAAACTGCTTCT+AGG | - | chr4.3:18938645-18938664 | MS.gene023146:CDS | 40.0% | |
| ATGACTGATCCAAGATCTGA+TGG | - | chr4.3:18939144-18939163 | MS.gene023146:intron | 40.0% | |
| ATGCTTCCAAATTCCCTACT+CGG | - | chr4.3:18938026-18938045 | MS.gene023146:intron | 40.0% | |
| CAAAATAGGAGGCCAGTAAA+AGG | + | chr4.3:18941271-18941290 | None:intergenic | 40.0% | |
| CACCCATAACAAAACCATCA+CGG | + | chr4.3:18938685-18938704 | None:intergenic | 40.0% | |
| CCCAAGTATTCAGCAATGAT+AGG | + | chr4.3:18939096-18939115 | None:intergenic | 40.0% | |
| CCCCAAACCAATAGGAATAA+TGG | + | chr4.3:18938588-18938607 | None:intergenic | 40.0% | |
| CTGTGATACCAGTCTATGAT+AGG | - | chr4.3:18940574-18940593 | MS.gene023146:intron | 40.0% | |
| CTTAGCAACAGCTTTACAAG+AGG | + | chr4.3:18939460-18939479 | None:intergenic | 40.0% | |
| GAAGCTGCCATTATTCCTAT+TGG | - | chr4.3:18938578-18938597 | MS.gene023146:intron | 40.0% | |
| GACAAATCAACATGCAGCAA+TGG | + | chr4.3:18940071-18940090 | None:intergenic | 40.0% | |
| GCTAACATAATGTAGCATCC+TGG | + | chr4.3:18939864-18939883 | None:intergenic | 40.0% | |
| GGAAAGGAAAAACACACTGA+AGG | + | chr4.3:18939325-18939344 | None:intergenic | 40.0% | |
| GTCAAGCCAAGATTTCTTAG+AGG | + | chr4.3:18939767-18939786 | None:intergenic | 40.0% | |
| TAAAACTGCTTCTAGGCCTT+GGG | - | chr4.3:18938652-18938671 | MS.gene023146:CDS | 40.0% | |
| TAAAAGCCATAACAACAGGG+TGG | - | chr4.3:18940641-18940660 | MS.gene023146:CDS | 40.0% | |
| TATGCATCAGTTAATGGCCA+GGG | + | chr4.3:18940547-18940566 | None:intergenic | 40.0% | |
| TATGTAAAGCTGTCTGCACA+CGG | - | chr4.3:18939610-18939629 | MS.gene023146:intron | 40.0% | |
| TCAAAATCAACTGCAGGTTC+TGG | + | chr4.3:18941349-18941368 | None:intergenic | 40.0% | |
| TGACTGATCCAAGATCTGAT+GGG | - | chr4.3:18939145-18939164 | MS.gene023146:intron | 40.0% | |
| TTTGGTACACGGTACAATAG+GGG | - | chr4.3:18939403-18939422 | MS.gene023146:intron | 40.0% | |
| TTTGTTTGCCTTGGTCTCTT+TGG | - | chr4.3:18941315-18941334 | MS.gene023146:CDS | 40.0% | |
| ! | AAGGCCTAGAAGCAGTTTTA+GGG | + | chr4.3:18938652-18938671 | None:intergenic | 40.0% |
| ! | ACATTTTATCTGCCACCTCT+TGG | - | chr4.3:18940799-18940818 | MS.gene023146:CDS | 40.0% |
| ! | CTAAGGCCTCTAAGAAATCT+TGG | - | chr4.3:18939758-18939777 | MS.gene023146:intron | 40.0% |
| ! | CTTTTGGTACACGGTACAAT+AGG | - | chr4.3:18939401-18939420 | MS.gene023146:intron | 40.0% |
| ! | GGGATTGATTTAGGTTTCAG+GGG | - | chr4.3:18938446-18938465 | MS.gene023146:intron | 40.0% |
| ! | GGTTGGGGTACCAATAAATA+AGG | + | chr4.3:18940910-18940929 | None:intergenic | 40.0% |
| ! | GTGGGATCACATTGATTGAT+AGG | - | chr4.3:18937999-18938018 | MS.gene023146:intron | 40.0% |
| ! | TTTTGTGGGGTGGATAAAAG+AGG | - | chr4.3:18941181-18941200 | MS.gene023146:CDS | 40.0% |
| !! | AAGAAAGCACTTGAAGATGC+TGG | - | chr4.3:18938148-18938167 | MS.gene023146:intron | 40.0% |
| !! | AAGGTTTTCAAGAACCCTTC+TGG | - | chr4.3:18940419-18940438 | MS.gene023146:intron | 40.0% |
| !! | GGTGGATAAAAGAGGTGTTT+GGG | - | chr4.3:18941189-18941208 | MS.gene023146:CDS | 40.0% |
| !! | GTGGATAAAAGAGGTGTTTG+GGG | - | chr4.3:18941190-18941209 | MS.gene023146:CDS | 40.0% |
| !! | GTTCTGAAAGGCAAAATAGG+AGG | + | chr4.3:18941282-18941301 | None:intergenic | 40.0% |
| !! | TAAAGAACGTGCTGGTGTTT+TGG | - | chr4.3:18938295-18938314 | MS.gene023146:intron | 40.0% |
| !! | TGCAGTTGATTTTGATACCG+TGG | - | chr4.3:18941354-18941373 | MS.gene023146:CDS | 40.0% |
| !!! | AGACCGTGATGGTTTTGTTA+TGG | - | chr4.3:18938679-18938698 | MS.gene023146:CDS | 40.0% |
| !!! | GACCGTGATGGTTTTGTTAT+GGG | - | chr4.3:18938680-18938699 | MS.gene023146:CDS | 40.0% |
| !!! | GATGGTTTTGTTATGGGTGA+AGG | - | chr4.3:18938686-18938705 | MS.gene023146:CDS | 40.0% |
| !!! | GGCCTTTTTTTCTTTCTTCC+AGG | - | chr4.3:18941490-18941509 | MS.gene023146:CDS | 40.0% |
| !!! | TCAAGTCGCGTTGTTTTTGT+GGG | - | chr4.3:18941167-18941186 | MS.gene023146:CDS | 40.0% |
| ACAAAACCCCCCAAACCAAT+AGG | + | chr4.3:18938596-18938615 | None:intergenic | 45.0% | |
| ATTCTGCACCAAAGAGACCA+AGG | + | chr4.3:18941326-18941345 | None:intergenic | 45.0% | |
| CATGCAACTTCCACTCTTGT+TGG | - | chr4.3:18940368-18940387 | MS.gene023146:intron | 45.0% | |
| CTAAAACTGCTTCTAGGCCT+TGG | - | chr4.3:18938651-18938670 | MS.gene023146:CDS | 45.0% | |
| GAACTGAACGGATCCCTAAT+TGG | - | chr4.3:18938241-18938260 | MS.gene023146:intron | 45.0% | |
| GAGTAAGACAATACCTCCTC+GGG | + | chr4.3:18939222-18939241 | None:intergenic | 45.0% | |
| GTCAGGAATGGGTGGTTTAA+CGG | - | chr4.3:18938322-18938341 | MS.gene023146:intron | 45.0% | |
| TCTGCCACCTCTTGGAATAA+TGG | - | chr4.3:18940807-18940826 | MS.gene023146:CDS | 45.0% | |
| TGCTGCCAATCACATTCGTA+GGG | - | chr4.3:18938523-18938542 | MS.gene023146:intron | 45.0% | |
| TTGGGATCCTTCTCTCTTTG+AGG | + | chr4.3:18937890-18937909 | None:intergenic | 45.0% | |
| ! | ATCCTTCTCTCTTTGAGGAG+CGG | + | chr4.3:18937885-18937904 | None:intergenic | 45.0% |
| ! | CAAGGCCTAGAAGCAGTTTT+AGG | + | chr4.3:18938653-18938672 | None:intergenic | 45.0% |
| ! | GGTTTAACGGTGTTTTCCGA+CGG | - | chr4.3:18938335-18938354 | MS.gene023146:intron | 45.0% |
| ! | TTTGTTATGGGTGAAGGTGC+TGG | - | chr4.3:18938692-18938711 | MS.gene023146:CDS | 45.0% |
| !! | CTGGTATCGATATCAGTACC+AGG | - | chr4.3:18939843-18939862 | MS.gene023146:intron | 45.0% |
| !! | GGGTGGATAAAAGAGGTGTT+TGG | - | chr4.3:18941188-18941207 | MS.gene023146:CDS | 45.0% |
| !! | TGAGGCCGATTTGATGATTG+CGG | - | chr4.3:18938547-18938566 | MS.gene023146:intron | 45.0% |
| !! | TTCCACTCTTGTTGGTGACT+TGG | - | chr4.3:18940376-18940395 | MS.gene023146:intron | 45.0% |
| !!! | AACGTGCTGGTGTTTTGGTT+GGG | - | chr4.3:18938300-18938319 | MS.gene023146:intron | 45.0% |
| !!! | AAGGTGCTGGAGTTTTGGTA+AGG | - | chr4.3:18938705-18938724 | MS.gene023146:CDS | 45.0% |
| !!! | CAAGTCGCGTTGTTTTTGTG+GGG | - | chr4.3:18941168-18941187 | MS.gene023146:CDS | 45.0% |
| !!! | CGGCATTGGAGGATTTTTTG+CGG | + | chr4.3:18937799-18937818 | None:intergenic | 45.0% |
| !!! | GTCAAGTCGCGTTGTTTTTG+TGG | - | chr4.3:18941166-18941185 | MS.gene023146:CDS | 45.0% |
| !!! | GTTTTGGTTGGGTCAGGAAT+GGG | - | chr4.3:18938311-18938330 | MS.gene023146:intron | 45.0% |
| !!! | TGTTTTGGTTGGGTCAGGAA+TGG | - | chr4.3:18938310-18938329 | MS.gene023146:intron | 45.0% |
| !!! | TTGGAGGATTTTTTGCGGAG+TGG | + | chr4.3:18937794-18937813 | None:intergenic | 45.0% |
| AAAACAGGACACACGCGACA+TGG | + | chr4.3:18938968-18938987 | None:intergenic | 50.0% | |
| AACCCTCAGAGCTAAACCCA+CGG | + | chr4.3:18938066-18938085 | None:intergenic | 50.0% | |
| ACATCGACGGGAAGAATGAC+CGG | - | chr4.3:18938086-18938105 | MS.gene023146:intron | 50.0% | |
| AGACGACGGAGAGTCTCTTT+GGG | + | chr4.3:18937844-18937863 | None:intergenic | 50.0% | |
| AGTGATCACGACACGCTTCT+TGG | + | chr4.3:18937909-18937928 | None:intergenic | 50.0% | |
| ATGCAGCCACCCTGTTGTTA+TGG | + | chr4.3:18940650-18940669 | None:intergenic | 50.0% | |
| CAATCACATTCGTAGGGGTG+AGG | - | chr4.3:18938529-18938548 | MS.gene023146:intron | 50.0% | |
| CAATGTGATCCCACTCTCAC+CGG | + | chr4.3:18937993-18938012 | None:intergenic | 50.0% | |
| CACCTCTTGGAATAATGGCC+TGG | - | chr4.3:18940812-18940831 | MS.gene023146:CDS | 50.0% | |
| CAGGCCATTATTCCAAGAGG+TGG | + | chr4.3:18940814-18940833 | None:intergenic | 50.0% | |
| CCATCACGGTCTTTATCCCA+AGG | + | chr4.3:18938671-18938690 | None:intergenic | 50.0% | |
| CCCACCCGCAATCATCAAAT+CGG | + | chr4.3:18938555-18938574 | None:intergenic | 50.0% | |
| CCTTGGGATAAAGACCGTGA+TGG | - | chr4.3:18938668-18938687 | MS.gene023146:CDS | 50.0% | |
| CTCACCCCTACGAATGTGAT+TGG | + | chr4.3:18938531-18938550 | None:intergenic | 50.0% | |
| CTCGCTTCATGGCATGTTCA+AGG | + | chr4.3:18939068-18939087 | None:intergenic | 50.0% | |
| CTGCTGCCAATCACATTCGT+AGG | - | chr4.3:18938522-18938541 | MS.gene023146:intron | 50.0% | |
| CTTGAACATGCCATGAAGCG+AGG | - | chr4.3:18939066-18939085 | MS.gene023146:intron | 50.0% | |
| GACCAGGCCATTATTCCAAG+AGG | + | chr4.3:18940817-18940836 | None:intergenic | 50.0% | |
| GCTGCCAATCACATTCGTAG+GGG | - | chr4.3:18938524-18938543 | MS.gene023146:intron | 50.0% | |
| GGAGACAATCATCCTGTCTC+CGG | + | chr4.3:18938108-18938127 | None:intergenic | 50.0% | |
| GGAGACAGGATGATTGTCTC+CGG | - | chr4.3:18938107-18938126 | MS.gene023146:intron | 50.0% | |
| GTACACGGTACAATAGGGGA+TGG | - | chr4.3:18939407-18939426 | MS.gene023146:intron | 50.0% | |
| GTGATCACGACACGCTTCTT+GGG | + | chr4.3:18937908-18937927 | None:intergenic | 50.0% | |
| TAAAGCTGTCTGCACACGGT+GGG | - | chr4.3:18939614-18939633 | MS.gene023146:intron | 50.0% | |
| TGCCAAGTCACCAACAAGAG+TGG | + | chr4.3:18940381-18940400 | None:intergenic | 50.0% | |
| TGCGAACCGAGTAGGGAATT+TGG | + | chr4.3:18938035-18938054 | None:intergenic | 50.0% | |
| TGTGGGAAGGAGTAGCACTA+TGG | - | chr4.3:18939640-18939659 | MS.gene023146:intron | 50.0% | |
| TTCTACGAGAAGCTTCTCGC+CGG | - | chr4.3:18937971-18937990 | MS.gene023146:intron | 50.0% | |
| ! | AAATTCCCTACTCGGTTCGC+AGG | - | chr4.3:18938034-18938053 | MS.gene023146:intron | 50.0% |
| ! | AAGAAGCGTGTCGTGATCAC+TGG | - | chr4.3:18937908-18937927 | MS.gene023146:CDS | 50.0% |
| ! | CCGATTTGATGATTGCGGGT+GGG | - | chr4.3:18938552-18938571 | MS.gene023146:intron | 50.0% |
| ! | CGGTGCCGAAAATCTCGATA+AGG | - | chr4.3:18938174-18938193 | MS.gene023146:intron | 50.0% |
| ! | CTGCTGCTTGACATTTGCCA+CGG | + | chr4.3:18941374-18941393 | None:intergenic | 50.0% |
| ! | GCACTTGAAGATGCTGGTCT+CGG | - | chr4.3:18938154-18938173 | MS.gene023146:intron | 50.0% |
| ! | TTTTTGCGGAGTGGTTCGAG+TGG | + | chr4.3:18937785-18937804 | None:intergenic | 50.0% |
| !! | AGCTCTGAGGGTTACATCGA+CGG | - | chr4.3:18938073-18938092 | MS.gene023146:intron | 50.0% |
| !! | ATCCGTGGGTTTAGCTCTGA+GGG | - | chr4.3:18938061-18938080 | MS.gene023146:intron | 50.0% |
| !! | GAGGCCGATTTGATGATTGC+GGG | - | chr4.3:18938548-18938567 | MS.gene023146:intron | 50.0% |
| !! | GATCCAAGATCTGATGGGCT+TGG | - | chr4.3:18939150-18939169 | MS.gene023146:intron | 50.0% |
| !! | TCTATGATAGGGCACTGCCT+TGG | - | chr4.3:18940586-18940605 | MS.gene023146:intron | 50.0% |
| !!! | GAACGTGCTGGTGTTTTGGT+TGG | - | chr4.3:18938299-18938318 | MS.gene023146:intron | 50.0% |
| !!! | GAGTCTCTTTGGGGTTTTGG+CGG | + | chr4.3:18937834-18937853 | None:intergenic | 50.0% |
| !!! | GGAGAGTCTCTTTGGGGTTT+TGG | + | chr4.3:18937837-18937856 | None:intergenic | 50.0% |
| AAAGCTGTCTGCACACGGTG+GGG | - | chr4.3:18939615-18939634 | MS.gene023146:intron | 55.0% | |
| ACGCCAAGCCCATCAGATCT+TGG | + | chr4.3:18939156-18939175 | None:intergenic | 55.0% | |
| ATCTGACCTGCGAACCGAGT+AGG | + | chr4.3:18938043-18938062 | None:intergenic | 55.0% | |
| ATGGGTGGCGTCACTGTACA+TGG | - | chr4.3:18937932-18937951 | MS.gene023146:CDS | 55.0% | |
| CGGTACAATAGGGGATGGCA+TGG | - | chr4.3:18939412-18939431 | MS.gene023146:intron | 55.0% | |
| CGTGTCGTGATCACTGGCAT+GGG | - | chr4.3:18937914-18937933 | MS.gene023146:CDS | 55.0% | |
| GACGACGGAGAGTCTCTTTG+GGG | + | chr4.3:18937843-18937862 | None:intergenic | 55.0% | |
| GAGACGACGGAGAGTCTCTT+TGG | + | chr4.3:18937845-18937864 | None:intergenic | 55.0% | |
| GATAGGTGCACCTCGCTTCA+TGG | + | chr4.3:18939079-18939098 | None:intergenic | 55.0% | |
| GGAGTGGTTCGAGTGGTGAA+GGG | + | chr4.3:18937778-18937797 | None:intergenic | 55.0% | |
| GGCAGTGCCCTATCATAGAC+TGG | + | chr4.3:18940585-18940604 | None:intergenic | 55.0% | |
| GTAAAGCTGTCTGCACACGG+TGG | - | chr4.3:18939613-18939632 | MS.gene023146:intron | 55.0% | |
| TCGGATGTAAGGGGCCAAGT+TGG | - | chr4.3:18939937-18939956 | MS.gene023146:intron | 55.0% | |
| TCTGACCTGCGAACCGAGTA+GGG | + | chr4.3:18938042-18938061 | None:intergenic | 55.0% | |
| TGCCGCTCCTCAAAGAGAGA+AGG | - | chr4.3:18937880-18937899 | MS.gene023146:intron | 55.0% | |
| TTGGTTGGGTCAGGAATGGG+TGG | - | chr4.3:18938314-18938333 | MS.gene023146:intron | 55.0% | |
| ! | CAGAGCAGTCTTGTAGACGC+CGG | - | chr4.3:18939189-18939208 | MS.gene023146:intron | 55.0% |
| ! | TGGTGGACACAACTCTGTCG+TGG | - | chr4.3:18941534-18941553 | MS.gene023146:CDS | 55.0% |
| !! | GATCCGTGGGTTTAGCTCTG+AGG | - | chr4.3:18938060-18938079 | MS.gene023146:intron | 55.0% |
| !! | GCCGATTTGATGATTGCGGG+TGG | - | chr4.3:18938551-18938570 | MS.gene023146:intron | 55.0% |
| !! | GCTCTGAGGGTTACATCGAC+GGG | - | chr4.3:18938074-18938093 | MS.gene023146:intron | 55.0% |
| !! | TTGCAGAGGAGGCACCAACT+TGG | + | chr4.3:18939954-18939973 | None:intergenic | 55.0% |
| !!! | GCTGGTGTTTTGGTTGGGTC+AGG | - | chr4.3:18938305-18938324 | MS.gene023146:intron | 55.0% |
| !!! | GGGTGAAGGTGCTGGAGTTT+TGG | - | chr4.3:18938700-18938719 | MS.gene023146:CDS | 55.0% |
| !!! | GTCGCGTTGTTTTTGTGGGG+TGG | - | chr4.3:18941171-18941190 | MS.gene023146:CDS | 55.0% |
| !!! | TCTCTTTGGGGTTTTGGCGG+TGG | + | chr4.3:18937831-18937850 | None:intergenic | 55.0% |
| AAGCTTCTCGCCGGTGAGAG+TGG | - | chr4.3:18937980-18937999 | MS.gene023146:intron | 60.0% | |
| AGCTTCTCGCCGGTGAGAGT+GGG | - | chr4.3:18937981-18938000 | MS.gene023146:intron | 60.0% | |
| CGGAGTGGTTCGAGTGGTGA+AGG | + | chr4.3:18937779-18937798 | None:intergenic | 60.0% | |
| CGGCGTCTACAAGACTGCTC+TGG | + | chr4.3:18939191-18939210 | None:intergenic | 60.0% | |
| CGGGAAGAATGACCGGAGAC+AGG | - | chr4.3:18938093-18938112 | MS.gene023146:intron | 60.0% | |
| CTCCGGTACTGCAATGTCGC+CGG | - | chr4.3:18938124-18938143 | MS.gene023146:intron | 60.0% | |
| GCGTGTCGTGATCACTGGCA+TGG | - | chr4.3:18937913-18937932 | MS.gene023146:CDS | 60.0% | |
| GGTGAAGGGCGGAGAGTGAA+GGG | + | chr4.3:18937764-18937783 | None:intergenic | 60.0% | |
| GGTTCGCAGGTCAGATCCGT+GGG | - | chr4.3:18938047-18938066 | MS.gene023146:intron | 60.0% | |
| GTCGTGATCACTGGCATGGG+TGG | - | chr4.3:18937917-18937936 | MS.gene023146:CDS | 60.0% | |
| GTGGTTCGAGTGGTGAAGGG+CGG | + | chr4.3:18937775-18937794 | None:intergenic | 60.0% | |
| TACCTCCTCGGGTGACACAC+CGG | + | chr4.3:18939211-18939230 | None:intergenic | 60.0% | |
| TCCCGGCGACATTGCAGTAC+CGG | + | chr4.3:18938129-18938148 | None:intergenic | 60.0% | |
| TCCGGTACTGCAATGTCGCC+GGG | - | chr4.3:18938125-18938144 | MS.gene023146:intron | 60.0% | |
| TGGTGAAGGGCGGAGAGTGA+AGG | + | chr4.3:18937765-18937784 | None:intergenic | 60.0% | |
| TTGAGGAGCGGCAGTGGTGA+CGG | + | chr4.3:18937873-18937892 | None:intergenic | 60.0% | |
| ! | CTCTCTTTGAGGAGCGGCAG+TGG | + | chr4.3:18937879-18937898 | None:intergenic | 60.0% |
| !!! | CTTTGGGGTTTTGGCGGTGG+TGG | + | chr4.3:18937828-18937847 | None:intergenic | 60.0% |
| ACACGGTGGGGTGTGTGGGA+AGG | - | chr4.3:18939627-18939646 | MS.gene023146:intron | 65.0% | |
| CGGTTCGCAGGTCAGATCCG+TGG | - | chr4.3:18938046-18938065 | MS.gene023146:intron | 65.0% | |
| CTGCACACGGTGGGGTGTGT+GGG | - | chr4.3:18939623-18939642 | MS.gene023146:intron | 65.0% | |
| TCTGCACACGGTGGGGTGTG+TGG | - | chr4.3:18939622-18939641 | MS.gene023146:intron | 65.0% | |
| ! | GGTGACGGCGGAAGAGACGA+CGG | + | chr4.3:18937858-18937877 | None:intergenic | 65.0% |
| !! | TGGGGTTTTGGCGGTGGTGG+TGG | + | chr4.3:18937825-18937844 | None:intergenic | 65.0% |
| !!! | GGTTTTGGCGGTGGTGGTGG+CGG | + | chr4.3:18937822-18937841 | None:intergenic | 65.0% |
| AGACGCCGGTGTGTCACCCG+AGG | - | chr4.3:18939203-18939222 | MS.gene023146:intron | 70.0% | |
| CACTGCCTTGGCGCAGCTGG+GGG | - | chr4.3:18940598-18940617 | MS.gene023146:CDS | 70.0% | |
| CCAAACCCCCAGCTGCGCCA+AGG | + | chr4.3:18940606-18940625 | None:intergenic | 70.0% | |
| CCTTGGCGCAGCTGGGGGTT+TGG | - | chr4.3:18940603-18940622 | MS.gene023146:CDS | 70.0% | |
| GCACTGCCTTGGCGCAGCTG+GGG | - | chr4.3:18940597-18940616 | MS.gene023146:CDS | 70.0% | |
| GGCACTGCCTTGGCGCAGCT+GGG | - | chr4.3:18940596-18940615 | MS.gene023146:CDS | 70.0% | |
| !! | AGGAGCGGCAGTGGTGACGG+CGG | + | chr4.3:18937870-18937889 | None:intergenic | 70.0% |
| !! | TTTGGCGGTGGTGGTGGCGG+CGG | + | chr4.3:18937819-18937838 | None:intergenic | 70.0% |
| CGCCGGTGTGTCACCCGAGG+AGG | - | chr4.3:18939206-18939225 | MS.gene023146:intron | 75.0% | |
| ! | GGGCACTGCCTTGGCGCAGC+TGG | - | chr4.3:18940595-18940614 | MS.gene023146:CDS | 75.0% |
| !! | GGTGGTGGCGGCGGCATTGG+AGG | + | chr4.3:18937810-18937829 | None:intergenic | 75.0% |
| !! | GGTGGTGGTGGCGGCGGCAT+TGG | + | chr4.3:18937813-18937832 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 18937737 | 18941579 | 18937737 | ID=MS.gene023146 |
| chr4.3 | mRNA | 18937737 | 18941579 | 18937737 | ID=MS.gene023146.t1;Parent=MS.gene023146 |
| chr4.3 | exon | 18941121 | 18941579 | 18941121 | ID=MS.gene023146.t1.exon1;Parent=MS.gene023146.t1 |
| chr4.3 | CDS | 18941121 | 18941579 | 18941121 | ID=cds.MS.gene023146.t1;Parent=MS.gene023146.t1 |
| chr4.3 | exon | 18940595 | 18941026 | 18940595 | ID=MS.gene023146.t1.exon2;Parent=MS.gene023146.t1 |
| chr4.3 | CDS | 18940595 | 18941026 | 18940595 | ID=cds.MS.gene023146.t1;Parent=MS.gene023146.t1 |
| chr4.3 | exon | 18940089 | 18940262 | 18940089 | ID=MS.gene023146.t1.exon3;Parent=MS.gene023146.t1 |
| chr4.3 | CDS | 18940089 | 18940262 | 18940089 | ID=cds.MS.gene023146.t1;Parent=MS.gene023146.t1 |
| chr4.3 | exon | 18938853 | 18938966 | 18938853 | ID=MS.gene023146.t1.exon4;Parent=MS.gene023146.t1 |
| chr4.3 | CDS | 18938853 | 18938966 | 18938853 | ID=cds.MS.gene023146.t1;Parent=MS.gene023146.t1 |
| chr4.3 | exon | 18938629 | 18938730 | 18938629 | ID=MS.gene023146.t1.exon5;Parent=MS.gene023146.t1 |
| chr4.3 | CDS | 18938629 | 18938730 | 18938629 | ID=cds.MS.gene023146.t1;Parent=MS.gene023146.t1 |
| chr4.3 | exon | 18937907 | 18937973 | 18937907 | ID=MS.gene023146.t1.exon6;Parent=MS.gene023146.t1 |
| chr4.3 | CDS | 18937907 | 18937973 | 18937907 | ID=cds.MS.gene023146.t1;Parent=MS.gene023146.t1 |
| chr4.3 | exon | 18937737 | 18937804 | 18937737 | ID=MS.gene023146.t1.exon7;Parent=MS.gene023146.t1 |
| chr4.3 | CDS | 18937737 | 18937804 | 18937737 | ID=cds.MS.gene023146.t1;Parent=MS.gene023146.t1 |
| Gene Sequence |
| Protein sequence |
