Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038042.t1 | XP_013468411.1 | 95.1 | 474 | 17 | 2 | 1 | 469 | 1 | 473 | 5.10E-253 | 883.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038042.t1 | Q8L3X9 | 77.4 | 434 | 95 | 1 | 31 | 464 | 29 | 459 | 2.6e-197 | 689.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038042.t1 | A0A072VM15 | 95.1 | 474 | 17 | 2 | 1 | 469 | 1 | 473 | 3.7e-253 | 883.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95807 | MS.gene038042 | PPI |
| MS.gene038042 | MS.gene006411 | PPI |
| MS.gene34377 | MS.gene038042 | PPI |
| MS.gene038042 | MS.gene028308 | PPI |
| MS.gene038042 | MS.gene36484 | PPI |
| MS.gene038042 | MS.gene070951 | PPI |
| MS.gene038042 | MS.gene023146 | PPI |
| MS.gene038042 | MS.gene35149 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038042.t1 | MTR_1g069385 | 96.203 | 474 | 12 | 2 | 1 | 469 | 1 | 473 | 0.0 | 930 |
| MS.gene038042.t1 | MTR_1g069385 | 98.857 | 350 | 4 | 0 | 120 | 469 | 1 | 350 | 0.0 | 707 |
| MS.gene038042.t1 | MTR_4g124880 | 41.686 | 439 | 219 | 8 | 33 | 464 | 80 | 488 | 9.43e-93 | 290 |
| MS.gene038042.t1 | MTR_2g043530 | 39.093 | 463 | 255 | 7 | 4 | 464 | 48 | 485 | 3.73e-92 | 288 |
| MS.gene038042.t1 | MTR_4g124880 | 45.402 | 348 | 177 | 5 | 122 | 464 | 3 | 342 | 3.63e-91 | 281 |
| MS.gene038042.t1 | MTR_1g103020 | 38.479 | 434 | 240 | 6 | 33 | 464 | 60 | 468 | 7.59e-91 | 284 |
| MS.gene038042.t1 | MTR_8g099695 | 36.129 | 465 | 263 | 7 | 9 | 464 | 39 | 478 | 8.58e-90 | 282 |
| MS.gene038042.t1 | MTR_4g096690 | 39.171 | 434 | 237 | 7 | 33 | 464 | 58 | 466 | 1.12e-87 | 276 |
| MS.gene038042.t1 | MTR_2g043530 | 39.294 | 425 | 231 | 7 | 4 | 426 | 48 | 447 | 1.14e-81 | 260 |
| MS.gene038042.t1 | MTR_8g099715 | 33.565 | 432 | 213 | 9 | 33 | 464 | 33 | 390 | 1.09e-69 | 227 |
| MS.gene038042.t1 | MTR_8g099700 | 31.418 | 261 | 130 | 5 | 33 | 291 | 76 | 289 | 6.84e-32 | 124 |
| MS.gene038042.t1 | MTR_8g099705 | 44.554 | 101 | 53 | 1 | 321 | 421 | 1 | 98 | 2.33e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038042.t1 | AT2G04540 | 77.419 | 434 | 95 | 1 | 31 | 464 | 29 | 459 | 0.0 | 689 |
| MS.gene038042.t1 | AT5G46290 | 38.710 | 434 | 239 | 6 | 33 | 464 | 61 | 469 | 1.53e-91 | 286 |
| MS.gene038042.t1 | AT5G46290 | 37.556 | 450 | 238 | 7 | 33 | 464 | 61 | 485 | 8.09e-89 | 280 |
| MS.gene038042.t1 | AT1G74960 | 39.062 | 448 | 242 | 7 | 21 | 464 | 118 | 538 | 6.14e-88 | 279 |
| MS.gene038042.t1 | AT1G74960 | 39.062 | 448 | 242 | 7 | 21 | 464 | 118 | 538 | 6.14e-88 | 279 |
| MS.gene038042.t1 | AT1G74960 | 39.062 | 448 | 242 | 7 | 21 | 464 | 118 | 538 | 6.14e-88 | 279 |
| MS.gene038042.t1 | AT5G46290 | 34.101 | 434 | 204 | 8 | 33 | 464 | 61 | 414 | 8.02e-66 | 218 |
Find 109 sgRNAs with CRISPR-Local
Find 419 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGATATGCTTCGGTAAA+TGG | 0.144969 | 1.2:+52402996 | None:intergenic |
| CGGAACATCGCGAAGGGTTT+TGG | 0.152340 | 1.2:-52403022 | MS.gene038042:CDS |
| ACAAGGCCAGATTCTGTATT+TGG | 0.163247 | 1.2:-52397746 | MS.gene038042:CDS |
| GTGAATTCAACCACGAAATT+TGG | 0.170597 | 1.2:-52402647 | MS.gene038042:CDS |
| CGAAATTTGGCTTAATTCTA+AGG | 0.209556 | 1.2:-52402634 | MS.gene038042:intron |
| ACGAATCTCTGCATAGATTT+TGG | 0.215851 | 1.2:+52400151 | None:intergenic |
| GCAATGAGAATGATTCAATT+TGG | 0.244331 | 1.2:-52400727 | MS.gene038042:CDS |
| GCAGTCACTGCTTGTGCTAC+TGG | 0.246599 | 1.2:-52400769 | MS.gene038042:CDS |
| ACTTGGAACCAACTAATTAA+TGG | 0.270968 | 1.2:-52402801 | MS.gene038042:CDS |
| AAGCTCTTAAAGATTCTAAT+TGG | 0.273978 | 1.2:-52401830 | MS.gene038042:CDS |
| CAATGAGAATGATTCAATTT+GGG | 0.278917 | 1.2:-52400726 | MS.gene038042:CDS |
| TTTGACATAGCTACTCTAAT+TGG | 0.296884 | 1.2:+52397686 | None:intergenic |
| GTAGCTATGTCAAACTCTTT+TGG | 0.297068 | 1.2:-52397677 | MS.gene038042:CDS |
| ATTGATGCATTATCAATTGC+AGG | 0.313043 | 1.2:-52400664 | MS.gene038042:CDS |
| GGCCACGTTAGCATGAAATA+TGG | 0.325924 | 1.2:-52401404 | MS.gene038042:CDS |
| TGGGGTAAGGGCACTGCGTT+TGG | 0.333218 | 1.2:-52402772 | MS.gene038042:CDS |
| CTTGTTAAATTAAGAGTTAA+TGG | 0.337796 | 1.2:+52397764 | None:intergenic |
| GGTCATCTCCTTGGTGCTGC+TGG | 0.343211 | 1.2:-52397972 | MS.gene038042:CDS |
| GCTAGCATGGTCAGAGAATA+TGG | 0.347485 | 1.2:+52398229 | None:intergenic |
| TGATGGGAGAGGTGCCATTC+TGG | 0.350310 | 1.2:-52399996 | MS.gene038042:CDS |
| CTCAGGATAGGTGAAGGTTC+TGG | 0.377739 | 1.2:-52400322 | MS.gene038042:intron |
| TTGTCACCAAATACAGAATC+TGG | 0.389800 | 1.2:+52397740 | None:intergenic |
| GCAGTGACTGCAGCATGATT+TGG | 0.395312 | 1.2:+52400781 | None:intergenic |
| GGGAACAAGTGCAGCAACTT+TGG | 0.398670 | 1.2:+52402686 | None:intergenic |
| ACCAGTGACAACTACTCTTC+GGG | 0.408769 | 1.2:+52402942 | None:intergenic |
| CATGACTCGTGCTTTAAAAC+AGG | 0.411211 | 1.2:-52399972 | MS.gene038042:intron |
| GCTACTGGGTCACATTCTAT+TGG | 0.420147 | 1.2:-52400754 | MS.gene038042:CDS |
| TAGCATGAAATATGGGTTCC+AGG | 0.420812 | 1.2:-52401396 | MS.gene038042:intron |
| CATGCCATTGACTGCTTCAA+AGG | 0.421259 | 1.2:-52397714 | MS.gene038042:CDS |
| ATTTGGGGATGCAGATGTTA+TGG | 0.426257 | 1.2:-52400710 | MS.gene038042:CDS |
| TAGAATTAAGCCAAATTTCG+TGG | 0.428412 | 1.2:+52402637 | None:intergenic |
| TATGCAGAGATTCGTGGCTA+TGG | 0.430190 | 1.2:-52400143 | MS.gene038042:CDS |
| CAGTCACTGCTTGTGCTACT+GGG | 0.430249 | 1.2:-52400768 | MS.gene038042:CDS |
| GGGGCTATTGGTCATCTCCT+TGG | 0.431894 | 1.2:-52397981 | MS.gene038042:CDS |
| AGGTTCTGGAGTCTTGGTCT+TGG | 0.434365 | 1.2:-52400308 | MS.gene038042:CDS |
| AACCAGTGACAACTACTCTT+CGG | 0.437019 | 1.2:+52402941 | None:intergenic |
| AATTGATAATGCATCAATAC+TGG | 0.442107 | 1.2:+52400669 | None:intergenic |
| TTCTGGAGTCTTGGTCTTGG+AGG | 0.446638 | 1.2:-52400305 | MS.gene038042:intron |
| TCTTTGTGTTCCTGCTCAGT+GGG | 0.460236 | 1.2:+52401804 | None:intergenic |
| AAGCTTTATCTGATATGCTT+CGG | 0.465093 | 1.2:+52402989 | None:intergenic |
| TTGGGCATGGTGACACCTCT+TGG | 0.467880 | 1.2:-52402840 | MS.gene038042:CDS |
| TTAATGGAAAATGTGGGGTA+AGG | 0.468366 | 1.2:-52402785 | MS.gene038042:CDS |
| CATTAACTCTTAATTTAACA+AGG | 0.477564 | 1.2:-52397763 | MS.gene038042:CDS |
| CATGCTACATCTACACCTTT+AGG | 0.481993 | 1.2:-52398409 | MS.gene038042:intron |
| AAGGGCCGCGATGCTTCTTG+TGG | 0.483481 | 1.2:+52400496 | None:intergenic |
| TAATTGGTTTCCCACTGAGC+AGG | 0.484051 | 1.2:-52401814 | MS.gene038042:CDS |
| CAACTAATTAATGGAAAATG+TGG | 0.484527 | 1.2:-52402792 | MS.gene038042:CDS |
| TAATGGAAAATGTGGGGTAA+GGG | 0.484865 | 1.2:-52402784 | MS.gene038042:CDS |
| ATTCGTGGCTATGGGATGTC+AGG | 0.488176 | 1.2:-52400134 | MS.gene038042:intron |
| GCATCGCGGCCCTTTGATAG+TGG | 0.490347 | 1.2:-52400487 | MS.gene038042:CDS |
| GGTAAGGGCACTGCGTTTGG+AGG | 0.494902 | 1.2:-52402769 | MS.gene038042:CDS |
| AGGTGAAGGTTCTGGAGTCT+TGG | 0.497176 | 1.2:-52400314 | MS.gene038042:CDS |
| AGGGCCGCGATGCTTCTTGT+GGG | 0.506418 | 1.2:+52400497 | None:intergenic |
| TCCCGAAGAGTAGTTGTCAC+TGG | 0.506500 | 1.2:-52402943 | MS.gene038042:intron |
| CCCTTTGATAGTGGTCGAGA+TGG | 0.506777 | 1.2:-52400478 | MS.gene038042:CDS |
| TTCTTTGTGTTCCTGCTCAG+TGG | 0.510962 | 1.2:+52401803 | None:intergenic |
| GTTGTGGAGTCCATAAAACT+TGG | 0.511122 | 1.2:-52402818 | MS.gene038042:CDS |
| ATTTCGTGGTTGAATTCACC+AGG | 0.512525 | 1.2:+52402651 | None:intergenic |
| ATATTGATAAACATGGCATC+AGG | 0.513692 | 1.2:-52401425 | MS.gene038042:CDS |
| GCCACGTTAGCATGAAATAT+GGG | 0.514383 | 1.2:-52401403 | MS.gene038042:CDS |
| AAAATCTATGCAGAGATTCG+TGG | 0.515530 | 1.2:-52400149 | MS.gene038042:CDS |
| TGCAACCACTCTTACCTTGG+TGG | 0.516765 | 1.2:+52398184 | None:intergenic |
| GATGCAGATGTTATGGTGAC+TGG | 0.517325 | 1.2:-52400703 | MS.gene038042:CDS |
| TGCTCAACTGATATGTGAAA+AGG | 0.518775 | 1.2:-52401641 | MS.gene038042:intron |
| AGAATCTTTAAGAGCTTCAT+CGG | 0.520139 | 1.2:+52401836 | None:intergenic |
| ATGCAGAGATTCGTGGCTAT+GGG | 0.522380 | 1.2:-52400142 | MS.gene038042:CDS |
| AACTAATTAATGGAAAATGT+GGG | 0.522501 | 1.2:-52402791 | MS.gene038042:CDS |
| ATCTCCTTTGAAGCAGTCAA+TGG | 0.522727 | 1.2:+52397710 | None:intergenic |
| TCCATCTCGACCACTATCAA+AGG | 0.533832 | 1.2:+52400477 | None:intergenic |
| GTTGCTGCACTTGTTCCCAC+TGG | 0.535358 | 1.2:-52402681 | MS.gene038042:CDS |
| TCTTACCTTGGTGGATGAGA+AGG | 0.535724 | 1.2:+52398193 | None:intergenic |
| TTCACCAGGGTTAGTTCCAG+TGG | 0.540554 | 1.2:+52402665 | None:intergenic |
| GAAGAAACAAGAGGAGGAGG+TGG | 0.549891 | 1.2:+52402964 | None:intergenic |
| CTAAAGAAAACGAGCTAGCA+TGG | 0.550761 | 1.2:+52398216 | None:intergenic |
| AGCACGAGTCATGGCCAGAA+TGG | 0.551728 | 1.2:+52399982 | None:intergenic |
| ATTACTCAACCTCCTAGTGA+TGG | 0.557704 | 1.2:-52400013 | MS.gene038042:CDS |
| GGAAGTCAATTGATCAAATG+TGG | 0.558097 | 1.2:+52402707 | None:intergenic |
| TTGATGTAATCTACATCAGA+AGG | 0.558485 | 1.2:+52398436 | None:intergenic |
| TAATGCATCAATACTGGACT+CGG | 0.561888 | 1.2:+52400675 | None:intergenic |
| CGGGAAGAAACAAGAGGAGG+AGG | 0.573055 | 1.2:+52402961 | None:intergenic |
| CCATCTCGACCACTATCAAA+GGG | 0.575537 | 1.2:+52400478 | None:intergenic |
| TTACTCAACCTCCTAGTGAT+GGG | 0.586083 | 1.2:-52400012 | MS.gene038042:CDS |
| ATGGCACCTCTCCCATCACT+AGG | 0.594673 | 1.2:+52400001 | None:intergenic |
| ATGGTGACACCTCTTGGTTG+TGG | 0.599365 | 1.2:-52402834 | MS.gene038042:CDS |
| GTTCCCACTGGAACTAACCC+TGG | 0.605390 | 1.2:-52402669 | MS.gene038042:CDS |
| ATTGTATGTAGGTTTGGGCA+TGG | 0.609629 | 1.2:-52402853 | MS.gene038042:intron |
| CAACCTCCTAGTGATGGGAG+AGG | 0.613052 | 1.2:-52400007 | MS.gene038042:CDS |
| AGGAACATCGATCCGTGACA+AGG | 0.617850 | 1.2:-52401884 | MS.gene038042:CDS |
| ACCACGGATATTGATAAACA+TGG | 0.621168 | 1.2:-52401432 | MS.gene038042:CDS |
| GCGTGGCGGAACATCGCGAA+GGG | 0.625508 | 1.2:-52403028 | MS.gene038042:CDS |
| TGCGTGGCGGAACATCGCGA+AGG | 0.630823 | 1.2:-52403029 | MS.gene038042:CDS |
| ACTAATTAATGGAAAATGTG+GGG | 0.632550 | 1.2:-52402790 | MS.gene038042:CDS |
| AATGAGAATGATTCAATTTG+GGG | 0.633075 | 1.2:-52400725 | MS.gene038042:CDS |
| ACCCATATTTCATGCTAACG+TGG | 0.635539 | 1.2:+52401402 | None:intergenic |
| TCACCAGGGTTAGTTCCAGT+GGG | 0.639371 | 1.2:+52402666 | None:intergenic |
| ATATGCTATAAACCTTGTCA+CGG | 0.646530 | 1.2:+52401872 | None:intergenic |
| TTTAGCCTTCTCATCCACCA+AGG | 0.647399 | 1.2:-52398198 | MS.gene038042:intron |
| TTGTTTGTGATGGCAATGCG+TGG | 0.649163 | 1.2:-52403045 | None:intergenic |
| GCACCTCTCCCATCACTAGG+AGG | 0.650311 | 1.2:+52400004 | None:intergenic |
| GCCATGTTTATCAATATCCG+TGG | 0.652979 | 1.2:+52401431 | None:intergenic |
| GCAGGAACACAAAGAAAGAA+CGG | 0.659294 | 1.2:-52401796 | MS.gene038042:intron |
| CAACAGCTCCAGCAGCACCA+AGG | 0.665891 | 1.2:+52397964 | None:intergenic |
| ACTCTTCGGGAAGAAACAAG+AGG | 0.666135 | 1.2:+52402955 | None:intergenic |
| TTTCGTGGTTGAATTCACCA+GGG | 0.690900 | 1.2:+52402652 | None:intergenic |
| TTTGTGATGGCAATGCGTGG+CGG | 0.692252 | 1.2:-52403042 | None:intergenic |
| TTATGGACTCCACAACCAAG+AGG | 0.692764 | 1.2:+52402825 | None:intergenic |
| CAAGCCCACAAGAAGCATCG+CGG | 0.701523 | 1.2:-52400501 | MS.gene038042:CDS |
| CTTCGGGAAGAAACAAGAGG+AGG | 0.712604 | 1.2:+52402958 | None:intergenic |
| GCAGATGTTATGGTGACTGG+AGG | 0.730564 | 1.2:-52400700 | MS.gene038042:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAAAAAAAAAACTTT+GGG | + | chr1.2:52400906-52400925 | None:intergenic | 10.0% |
| !! | AACATTCTATTTAAATTAAA+AGG | - | chr1.2:52398565-52398584 | MS.gene038042:intron | 10.0% |
| !!! | TTTTTCTCTTAAATTTTTAA+TGG | + | chr1.2:52402603-52402622 | None:intergenic | 10.0% |
| !! | AAAATTATATCTGAAAAACA+GGG | - | chr1.2:52399750-52399769 | MS.gene038042:intron | 15.0% |
| !! | ATTTAAGAGAAAAATTTGAA+TGG | - | chr1.2:52402609-52402628 | MS.gene038042:intron | 15.0% |
| !! | CAACAAAAAAAAAAAAACTT+TGG | + | chr1.2:52400907-52400926 | None:intergenic | 15.0% |
| !! | TTAAAAAATGGTTGTAATAT+AGG | - | chr1.2:52398267-52398286 | MS.gene038042:intron | 15.0% |
| !! | TTTAAGAGAAAAATTTGAAT+GGG | - | chr1.2:52402610-52402629 | MS.gene038042:intron | 15.0% |
| !!! | CAAAGTTTTTTTTTTTTTGT+TGG | - | chr1.2:52400905-52400924 | MS.gene038042:intron | 15.0% |
| !!! | GACAGTTATTTTTTAAAAAA+TGG | - | chr1.2:52398255-52398274 | MS.gene038042:CDS | 15.0% |
| !!! | TACATTTCTTGTTTAAATTA+CGG | + | chr1.2:52402023-52402042 | None:intergenic | 15.0% |
| !!! | TACTTTTCATTTTGAAATTA+CGG | - | chr1.2:52401897-52401916 | MS.gene038042:intron | 15.0% |
| !!! | TTATAAGTTTTTAACTCAAA+TGG | - | chr1.2:52399705-52399724 | MS.gene038042:intron | 15.0% |
| !!! | TTTAACTTCAAAATTAATCA+GGG | - | chr1.2:52398949-52398968 | MS.gene038042:intron | 15.0% |
| !!! | TTTTAACTTCAAAATTAATC+AGG | - | chr1.2:52398948-52398967 | MS.gene038042:intron | 15.0% |
| !! | AAAAACTACTTTCGATTTAT+TGG | - | chr1.2:52399290-52399309 | MS.gene038042:intron | 20.0% |
| !! | AAAGAAAAAAAACTTGAATG+AGG | + | chr1.2:52399092-52399111 | None:intergenic | 20.0% |
| !! | AACTAATTAATGGAAAATGT+GGG | - | chr1.2:52397870-52397889 | MS.gene038042:intron | 20.0% |
| !! | AATATTCAAACTTAAATTGC+TGG | + | chr1.2:52402307-52402326 | None:intergenic | 20.0% |
| !! | ACTTATTATGTATGAATAAG+TGG | - | chr1.2:52400783-52400802 | MS.gene038042:CDS | 20.0% |
| !! | AGTGACAATTAAAGTTAAAA+AGG | + | chr1.2:52401570-52401589 | None:intergenic | 20.0% |
| !! | ATATCTACATAAGTTAGTAA+AGG | + | chr1.2:52399374-52399393 | None:intergenic | 20.0% |
| !! | CATTAACTCTTAATTTAACA+AGG | - | chr1.2:52402898-52402917 | MS.gene038042:intron | 20.0% |
| !! | CTTATTATGTATGAATAAGT+GGG | - | chr1.2:52400784-52400803 | MS.gene038042:CDS | 20.0% |
| !! | CTTGTTAAATTAAGAGTTAA+TGG | + | chr1.2:52402900-52402919 | None:intergenic | 20.0% |
| !! | GAAAATTATATCTGAAAAAC+AGG | - | chr1.2:52399749-52399768 | MS.gene038042:intron | 20.0% |
| !! | GGAAATGAATAAACAAAAAA+AGG | + | chr1.2:52400451-52400470 | None:intergenic | 20.0% |
| !! | TAACAAATACAAAACAACAT+AGG | + | chr1.2:52400727-52400746 | None:intergenic | 20.0% |
| !! | TCTTTAGATATATAAAATGC+AGG | - | chr1.2:52399418-52399437 | MS.gene038042:intron | 20.0% |
| !! | TGAACATTAAGCAAAATAAA+TGG | + | chr1.2:52400258-52400277 | None:intergenic | 20.0% |
| !! | TGATACTTAAAAACTGATAT+TGG | - | chr1.2:52400101-52400120 | MS.gene038042:intron | 20.0% |
| !! | TTAACTTCAAAATTAATCAG+GGG | - | chr1.2:52398950-52398969 | MS.gene038042:intron | 20.0% |
| !! | TTAAGAGAAAAATTTGAATG+GGG | - | chr1.2:52402611-52402630 | MS.gene038042:intron | 20.0% |
| !! | TTTGATATCATTAACACTTA+GGG | + | chr1.2:52402090-52402109 | None:intergenic | 20.0% |
| !!! | ATATGAAGTATTTGACATAT+TGG | - | chr1.2:52398534-52398553 | MS.gene038042:intron | 20.0% |
| !!! | ATTCAAACTGTTTTCATATA+AGG | - | chr1.2:52398178-52398197 | MS.gene038042:intron | 20.0% |
| !!! | GTGTTATTATAAGTTTCTTT+TGG | - | chr1.2:52398648-52398667 | MS.gene038042:intron | 20.0% |
| !!! | TAATTTTTTCTGATTGGATA+TGG | + | chr1.2:52399569-52399588 | None:intergenic | 20.0% |
| !!! | TTTATAACTCTAAAACCTTT+GGG | + | chr1.2:52401066-52401085 | None:intergenic | 20.0% |
| !!! | TTTTATAACTCTAAAACCTT+TGG | + | chr1.2:52401067-52401086 | None:intergenic | 20.0% |
| !!! | TTTTGGCATATATTATTTCA+GGG | - | chr1.2:52401797-52401816 | MS.gene038042:CDS | 20.0% |
| !!! | TTTTTATATTCAAGTGCTTT+TGG | - | chr1.2:52401780-52401799 | MS.gene038042:intron | 20.0% |
| ! | AAATTATATGCTCATCTGTT+TGG | - | chr1.2:52402515-52402534 | MS.gene038042:intron | 25.0% |
| ! | AAGCTCTTAAAGATTCTAAT+TGG | - | chr1.2:52398831-52398850 | MS.gene038042:intron | 25.0% |
| ! | AAGTGTAAAGAAAACAAAGT+TGG | - | chr1.2:52398621-52398640 | MS.gene038042:intron | 25.0% |
| ! | AATATCCGTGGTATAAAAAA+TGG | + | chr1.2:52399221-52399240 | None:intergenic | 25.0% |
| ! | AATGAGAATGATTCAATTTG+GGG | - | chr1.2:52399936-52399955 | MS.gene038042:intron | 25.0% |
| ! | ACAAAGGCAAATAACTAATA+AGG | + | chr1.2:52400076-52400095 | None:intergenic | 25.0% |
| ! | ACTAATTAATGGAAAATGTG+GGG | - | chr1.2:52397871-52397890 | MS.gene038042:intron | 25.0% |
| ! | ACTATTAGATTAAGCATACA+GGG | + | chr1.2:52402841-52402860 | None:intergenic | 25.0% |
| ! | ATAAATAAAGAGAGAATGAG+AGG | + | chr1.2:52401465-52401484 | None:intergenic | 25.0% |
| ! | ATAGATTAAGCACAAATTCA+CGG | + | chr1.2:52402811-52402830 | None:intergenic | 25.0% |
| ! | ATATAGGATTACATGACAAT+AGG | - | chr1.2:52398283-52398302 | MS.gene038042:intron | 25.0% |
| ! | CAACTAATTAATGGAAAATG+TGG | - | chr1.2:52397869-52397888 | MS.gene038042:intron | 25.0% |
| ! | CAATAAGCATAATAGTTGTT+CGG | + | chr1.2:52398723-52398742 | None:intergenic | 25.0% |
| ! | CAATGAGAATGATTCAATTT+GGG | - | chr1.2:52399935-52399954 | MS.gene038042:intron | 25.0% |
| ! | GAAAACACAACAATACAATA+TGG | + | chr1.2:52402121-52402140 | None:intergenic | 25.0% |
| ! | GATAATAAGAGAAATAGAAC+AGG | + | chr1.2:52401494-52401513 | None:intergenic | 25.0% |
| ! | GTTTGATATCATTAACACTT+AGG | + | chr1.2:52402091-52402110 | None:intergenic | 25.0% |
| ! | TAAATAAAGAGAGAATGAGA+GGG | + | chr1.2:52401464-52401483 | None:intergenic | 25.0% |
| ! | TAACTTCAAAATTAATCAGG+GGG | - | chr1.2:52398951-52398970 | MS.gene038042:intron | 25.0% |
| ! | TATAGGATTACATGACAATA+GGG | - | chr1.2:52398284-52398303 | MS.gene038042:intron | 25.0% |
| ! | TATTCATTTCCCTATTGTTT+AGG | - | chr1.2:52400460-52400479 | MS.gene038042:intron | 25.0% |
| ! | TGAAGTTAAAATACAATGCA+AGG | + | chr1.2:52398939-52398958 | None:intergenic | 25.0% |
| ! | TGAATGAAATTATCATGTGA+AGG | - | chr1.2:52401755-52401774 | MS.gene038042:intron | 25.0% |
| ! | TTTGAATTGTATGTAGGTTT+GGG | - | chr1.2:52397803-52397822 | MS.gene038042:intron | 25.0% |
| !! | AAAAAAAAAAACTTTGGGAG+AGG | + | chr1.2:52400901-52400920 | None:intergenic | 25.0% |
| !! | AAAAAAAAAACTTTGGGAGA+GGG | + | chr1.2:52400900-52400919 | None:intergenic | 25.0% |
| !! | ACGGTATGCAAATTTTTATA+TGG | - | chr1.2:52398884-52398903 | MS.gene038042:intron | 25.0% |
| !! | CACATTTTCCATTAATTAGT+TGG | + | chr1.2:52397871-52397890 | None:intergenic | 25.0% |
| !! | CTCATTCTCTCTTTATTTAT+TGG | - | chr1.2:52401465-52401484 | MS.gene038042:intron | 25.0% |
| !! | CTTTTGGCATATATTATTTC+AGG | - | chr1.2:52401796-52401815 | MS.gene038042:intron | 25.0% |
| !! | GTAATATGTTTGTTAGTTGA+CGG | + | chr1.2:52401543-52401562 | None:intergenic | 25.0% |
| !! | TGAGTTATATTTTGTACTCA+AGG | + | chr1.2:52400142-52400161 | None:intergenic | 25.0% |
| !! | TTTTGAATTGTATGTAGGTT+TGG | - | chr1.2:52397802-52397821 | MS.gene038042:intron | 25.0% |
| !!! | AATTGATAATGCATCAATAC+TGG | + | chr1.2:52399995-52400014 | None:intergenic | 25.0% |
| !!! | ATCAGTTTTTAAGTATCAGA+GGG | + | chr1.2:52400099-52400118 | None:intergenic | 25.0% |
| !!! | ATTTCATATGGATTTTGACT+AGG | - | chr1.2:52400612-52400631 | MS.gene038042:intron | 25.0% |
| !!! | CCATTCTAGTTTTGTTATTA+GGG | - | chr1.2:52401315-52401334 | MS.gene038042:intron | 25.0% |
| !!! | CTTTGTTTTCTTTACACTTT+TGG | + | chr1.2:52398620-52398639 | None:intergenic | 25.0% |
| !!! | GGTAAGTTAAATTTTTTGTG+TGG | - | chr1.2:52400377-52400396 | MS.gene038042:intron | 25.0% |
| !!! | TATCAGTTTTTAAGTATCAG+AGG | + | chr1.2:52400100-52400119 | None:intergenic | 25.0% |
| !!! | TTAGTCCATTTTTTATACCA+CGG | - | chr1.2:52399213-52399232 | MS.gene038042:intron | 25.0% |
| !!! | TTTCATATGGATTTTGACTA+GGG | - | chr1.2:52400613-52400632 | MS.gene038042:intron | 25.0% |
| !!! | TTTGCTTAATGTTCACTTTT+TGG | - | chr1.2:52400263-52400282 | MS.gene038042:intron | 25.0% |
| !!! | TTTTAAAAGAGTAAGAAGCA+TGG | + | chr1.2:52399534-52399553 | None:intergenic | 25.0% |
| AAAAACTGATATTGGAATGC+AGG | - | chr1.2:52400109-52400128 | MS.gene038042:intron | 30.0% | |
| AAGGCAAATAACTAATAAGG+TGG | + | chr1.2:52400073-52400092 | None:intergenic | 30.0% | |
| AATGGTTGCAATTTAGAGAT+TGG | - | chr1.2:52399723-52399742 | MS.gene038042:intron | 30.0% | |
| ACATTGATGGAAAAGACAAA+GGG | + | chr1.2:52401104-52401123 | None:intergenic | 30.0% | |
| ACCACAAATAAAACTAAGAC+TGG | + | chr1.2:52400585-52400604 | None:intergenic | 30.0% | |
| ACCTATTCAGAAGAAACTAA+GGG | - | chr1.2:52401830-52401849 | MS.gene038042:CDS | 30.0% | |
| ACTATATAAGCTTGGCTATT+TGG | - | chr1.2:52401134-52401153 | MS.gene038042:intron | 30.0% | |
| ACTCTTCACAAAAGAACTAT+TGG | - | chr1.2:52401221-52401240 | MS.gene038042:intron | 30.0% | |
| ACTTGGAACCAACTAATTAA+TGG | - | chr1.2:52397860-52397879 | MS.gene038042:intron | 30.0% | |
| ATAATTATATCCGAAGTGAC+AGG | + | chr1.2:52399628-52399647 | None:intergenic | 30.0% | |
| ATATGCTATAAACCTTGTCA+CGG | + | chr1.2:52398792-52398811 | None:intergenic | 30.0% | |
| ATATTGATAAACATGGCATC+AGG | - | chr1.2:52399236-52399255 | MS.gene038042:intron | 30.0% | |
| ATCACCTGTATAAAGAATTC+TGG | + | chr1.2:52402387-52402406 | None:intergenic | 30.0% | |
| ATGTTTGAATACTACAACAG+TGG | - | chr1.2:52402331-52402350 | MS.gene038042:intron | 30.0% | |
| ATTATGTATGAATAAGTGGG+AGG | - | chr1.2:52400787-52400806 | MS.gene038042:CDS | 30.0% | |
| ATTGATGCATTATCAATTGC+AGG | - | chr1.2:52399997-52400016 | MS.gene038042:CDS | 30.0% | |
| CAAATAACTAATAAGGTGGT+TGG | + | chr1.2:52400069-52400088 | None:intergenic | 30.0% | |
| CACTATTAGATTAAGCATAC+AGG | + | chr1.2:52402842-52402861 | None:intergenic | 30.0% | |
| CATAAAATCTCATGTATTCG+TGG | - | chr1.2:52397777-52397796 | MS.gene038042:intron | 30.0% | |
| CCCTAATAACAAAACTAGAA+TGG | + | chr1.2:52401318-52401337 | None:intergenic | 30.0% | |
| CCTGACTGAAATATATGAAA+AGG | + | chr1.2:52402198-52402217 | None:intergenic | 30.0% | |
| CGAACAACTATTATGCTTAT+TGG | - | chr1.2:52398721-52398740 | MS.gene038042:intron | 30.0% | |
| CGATAAACGTCTTAATTAAG+TGG | - | chr1.2:52398107-52398126 | MS.gene038042:intron | 30.0% | |
| CTAACCAATCTCTTAAAACA+TGG | + | chr1.2:52399656-52399675 | None:intergenic | 30.0% | |
| CTTCAAATTATTGCTCTGTT+TGG | - | chr1.2:52400286-52400305 | MS.gene038042:intron | 30.0% | |
| GAAATGTCACAATACTACAA+TGG | + | chr1.2:52398753-52398772 | None:intergenic | 30.0% | |
| GATGTCAGGTAATTTATTGT+AGG | - | chr1.2:52400541-52400560 | MS.gene038042:intron | 30.0% | |
| GATGTTATCTGTTATTGCTT+TGG | - | chr1.2:52398676-52398695 | MS.gene038042:intron | 30.0% | |
| GCAATGAGAATGATTCAATT+TGG | - | chr1.2:52399934-52399953 | MS.gene038042:intron | 30.0% | |
| GGTCAGATTATAAACAAAGA+AGG | + | chr1.2:52400430-52400449 | None:intergenic | 30.0% | |
| GTATGCTTAATCTAATAGTG+CGG | - | chr1.2:52402842-52402861 | MS.gene038042:CDS | 30.0% | |
| GTGAAATTATGGAACAGTTA+TGG | + | chr1.2:52402651-52402670 | None:intergenic | 30.0% | |
| TAAGTTAGTAAAGGACAATG+TGG | + | chr1.2:52399365-52399384 | None:intergenic | 30.0% | |
| TACCTATTCAGAAGAAACTA+AGG | - | chr1.2:52401829-52401848 | MS.gene038042:CDS | 30.0% | |
| TAGAATTAAGCCAAATTTCG+TGG | + | chr1.2:52398027-52398046 | None:intergenic | 30.0% | |
| TATAAACAAAGAAGGAGAAC+AGG | + | chr1.2:52400422-52400441 | None:intergenic | 30.0% | |
| TCCTGAGTAAAAACATAACT+TGG | + | chr1.2:52400326-52400345 | None:intergenic | 30.0% | |
| TTCACAAAAGAACTATTGGT+TGG | - | chr1.2:52401225-52401244 | MS.gene038042:intron | 30.0% | |
| TTCTAAATCAGTTTCACACA+AGG | + | chr1.2:52399494-52399513 | None:intergenic | 30.0% | |
| TTGATGTAATCTACATCAGA+AGG | + | chr1.2:52402228-52402247 | None:intergenic | 30.0% | |
| TTTGACATAGCTACTCTAAT+TGG | + | chr1.2:52402978-52402997 | None:intergenic | 30.0% | |
| ! | AAGCTTTATCTGATATGCTT+CGG | + | chr1.2:52397675-52397694 | None:intergenic | 30.0% |
| ! | AATAAGCTAAAACCAGCTTT+TGG | - | chr1.2:52398371-52398390 | MS.gene038042:intron | 30.0% |
| ! | AATAGTTCTTTTGTGAAGAG+TGG | + | chr1.2:52401222-52401241 | None:intergenic | 30.0% |
| ! | AGAATCTTTAAGAGCTTCAT+CGG | + | chr1.2:52398828-52398847 | None:intergenic | 30.0% |
| ! | CAGATGAGCATATAATTTGT+TGG | + | chr1.2:52402513-52402532 | None:intergenic | 30.0% |
| ! | CCTTTTCATATATTTCAGTC+AGG | - | chr1.2:52402195-52402214 | MS.gene038042:intron | 30.0% |
| ! | CGAAATTTGGCTTAATTCTA+AGG | - | chr1.2:52398027-52398046 | MS.gene038042:intron | 30.0% |
| ! | GTATAGAGAAAAGTGTAAAC+TGG | - | chr1.2:52398200-52398219 | MS.gene038042:CDS | 30.0% |
| ! | GTGGTTGATTTCATTTCATA+TGG | - | chr1.2:52400600-52400619 | MS.gene038042:intron | 30.0% |
| ! | TATTAAACTGGTTGTTGTTG+TGG | - | chr1.2:52399773-52399792 | MS.gene038042:intron | 30.0% |
| ! | TATTCTCCTCTAAGAACTTA+TGG | + | chr1.2:52398517-52398536 | None:intergenic | 30.0% |
| ! | TGAAAAACAGGGTATTAAAC+TGG | - | chr1.2:52399761-52399780 | MS.gene038042:intron | 30.0% |
| ! | TGGCTTTTTGAATTGTATGT+AGG | - | chr1.2:52397797-52397816 | MS.gene038042:intron | 30.0% |
| !! | ATAATTTCACTGATTTCAGG+GGG | - | chr1.2:52402661-52402680 | MS.gene038042:CDS | 30.0% |
| !! | CATAATTTCACTGATTTCAG+GGG | - | chr1.2:52402660-52402679 | MS.gene038042:CDS | 30.0% |
| !! | CCATAATTTCACTGATTTCA+GGG | - | chr1.2:52402659-52402678 | MS.gene038042:CDS | 30.0% |
| !! | GTGGTATAAAAAATGGACTA+AGG | + | chr1.2:52399214-52399233 | None:intergenic | 30.0% |
| !! | GTTATGTTTTTACTCAGGAT+AGG | - | chr1.2:52400327-52400346 | MS.gene038042:intron | 30.0% |
| !! | TCCAAGTTATGTTTTTACTC+AGG | - | chr1.2:52400322-52400341 | MS.gene038042:intron | 30.0% |
| !! | TCCATAATTTCACTGATTTC+AGG | - | chr1.2:52402658-52402677 | MS.gene038042:CDS | 30.0% |
| !! | TTAGTTGGTTCCAAGTTTTA+TGG | + | chr1.2:52397856-52397875 | None:intergenic | 30.0% |
| !!! | ATCGAAAGTAGTTTTTTACC+TGG | + | chr1.2:52399286-52399305 | None:intergenic | 30.0% |
| !!! | ATGTCAAACTCTTTTGGTTT+TGG | - | chr1.2:52402990-52403009 | MS.gene038042:CDS | 30.0% |
| !!! | GCCATTCTAGTTTTGTTATT+AGG | - | chr1.2:52401314-52401333 | MS.gene038042:intron | 30.0% |
| !!! | TCAACCATGTTTTAAGAGAT+TGG | - | chr1.2:52399649-52399668 | MS.gene038042:intron | 30.0% |
| !!! | TCCAGTCTTAGTTTTATTTG+TGG | - | chr1.2:52400581-52400600 | MS.gene038042:intron | 30.0% |
| !!! | TTCATATGGATTTTGACTAG+GGG | - | chr1.2:52400614-52400633 | MS.gene038042:intron | 30.0% |
| AAAATCTATGCAGAGATTCG+TGG | - | chr1.2:52400512-52400531 | MS.gene038042:CDS | 35.0% | |
| AAGCTATGCTAGAGAACTTA+CGG | - | chr1.2:52398347-52398366 | MS.gene038042:intron | 35.0% | |
| AATGAGAGCTTTCATCTAAG+AGG | + | chr1.2:52402564-52402583 | None:intergenic | 35.0% | |
| ACCACGGATATTGATAAACA+TGG | - | chr1.2:52399229-52399248 | MS.gene038042:intron | 35.0% | |
| ACCCTTAGTTTCTTCTGAAT+AGG | + | chr1.2:52401834-52401853 | None:intergenic | 35.0% | |
| ACTTATAATTGTTCCACCTG+AGG | + | chr1.2:52399693-52399712 | None:intergenic | 35.0% | |
| AGATGAAAGCTCTCATTCAT+GGG | - | chr1.2:52402567-52402586 | MS.gene038042:intron | 35.0% | |
| AGTATTGTGACATTTCCCTT+AGG | - | chr1.2:52398757-52398776 | MS.gene038042:intron | 35.0% | |
| ATCCAGAGTAAGCAAAAAGT+AGG | + | chr1.2:52403031-52403050 | None:intergenic | 35.0% | |
| ATCTGATATGCTTCGGTAAA+TGG | + | chr1.2:52397668-52397687 | None:intergenic | 35.0% | |
| ATGAGAGCTTTCATCTAAGA+GGG | + | chr1.2:52402563-52402582 | None:intergenic | 35.0% | |
| ATTAACACTTAGGGTGTGTT+TGG | + | chr1.2:52402081-52402100 | None:intergenic | 35.0% | |
| ATTGATGGAAAAGACAAAGG+GGG | + | chr1.2:52401102-52401121 | None:intergenic | 35.0% | |
| CATTGATGGAAAAGACAAAG+GGG | + | chr1.2:52401103-52401122 | None:intergenic | 35.0% | |
| CCCTGAAATCAGTGAAATTA+TGG | + | chr1.2:52402662-52402681 | None:intergenic | 35.0% | |
| CTCACCAGAATTCTTTATAC+AGG | - | chr1.2:52402380-52402399 | MS.gene038042:intron | 35.0% | |
| GACATTGATGGAAAAGACAA+AGG | + | chr1.2:52401105-52401124 | None:intergenic | 35.0% | |
| GCTCAAGTTCCTAAACAATA+GGG | + | chr1.2:52400472-52400491 | None:intergenic | 35.0% | |
| GGAAGTCAATTGATCAAATG+TGG | + | chr1.2:52397957-52397976 | None:intergenic | 35.0% | |
| GTGAATTCAACCACGAAATT+TGG | - | chr1.2:52398014-52398033 | MS.gene038042:intron | 35.0% | |
| TAATGCATCAATACTGGACT+CGG | + | chr1.2:52399989-52400008 | None:intergenic | 35.0% | |
| TAATGGAAAATGTGGGGTAA+GGG | - | chr1.2:52397877-52397896 | MS.gene038042:intron | 35.0% | |
| TAGATGAAAGCTCTCATTCA+TGG | - | chr1.2:52402566-52402585 | MS.gene038042:intron | 35.0% | |
| TAGCATAGCTTATGAAGAGA+CGG | + | chr1.2:52398338-52398357 | None:intergenic | 35.0% | |
| TATGCCAAAGTTAGAGTTGA+GGG | + | chr1.2:52400956-52400975 | None:intergenic | 35.0% | |
| TCCAGAGTAAGCAAAAAGTA+GGG | + | chr1.2:52403030-52403049 | None:intergenic | 35.0% | |
| TGAATGCGTAATTTGAGAGA+AGG | + | chr1.2:52397759-52397778 | None:intergenic | 35.0% | |
| TGCTAATATCTAACCAGTAC+TGG | + | chr1.2:52401650-52401669 | None:intergenic | 35.0% | |
| TGCTCAACTGATATGTGAAA+AGG | - | chr1.2:52399020-52399039 | MS.gene038042:intron | 35.0% | |
| TGCTCAAGTTCCTAAACAAT+AGG | + | chr1.2:52400473-52400492 | None:intergenic | 35.0% | |
| TGGCACTAACATAAAACACA+AGG | + | chr1.2:52400049-52400068 | None:intergenic | 35.0% | |
| TTAATGGAAAATGTGGGGTA+AGG | - | chr1.2:52397876-52397895 | MS.gene038042:intron | 35.0% | |
| TTATGCCAAAGTTAGAGTTG+AGG | + | chr1.2:52400957-52400976 | None:intergenic | 35.0% | |
| TTGTCACCAAATACAGAATC+TGG | + | chr1.2:52402924-52402943 | None:intergenic | 35.0% | |
| TTTAAGTATCAGAGGGACAA+AGG | + | chr1.2:52400092-52400111 | None:intergenic | 35.0% | |
| TTTCCCTATTCCTGAATACA+GGG | - | chr1.2:52399856-52399875 | MS.gene038042:intron | 35.0% | |
| TTTGTTAGTAGTTGGAAGCT+GGG | + | chr1.2:52401516-52401535 | None:intergenic | 35.0% | |
| ! | AAGAGATTGGTTAGTCAATC+AGG | - | chr1.2:52399662-52399681 | MS.gene038042:intron | 35.0% |
| ! | ACGAATCTCTGCATAGATTT+TGG | + | chr1.2:52400513-52400532 | None:intergenic | 35.0% |
| ! | ACTTTTTGCTTACTCTGGAT+CGG | - | chr1.2:52403031-52403050 | MS.gene038042:CDS | 35.0% |
| ! | CTTTTGATGTTCTTATCCCA+GGG | - | chr1.2:52402867-52402886 | MS.gene038042:intron | 35.0% |
| ! | GAGCTCTATCTTATTTCAAG+AGG | + | chr1.2:52399596-52399615 | None:intergenic | 35.0% |
| ! | GTAGCTATGTCAAACTCTTT+TGG | - | chr1.2:52402984-52403003 | MS.gene038042:CDS | 35.0% |
| ! | TCTTTTGATGTTCTTATCCC+AGG | - | chr1.2:52402866-52402885 | MS.gene038042:intron | 35.0% |
| ! | TTTTCCCTATTCCTGAATAC+AGG | - | chr1.2:52399855-52399874 | MS.gene038042:intron | 35.0% |
| ! | TTTTTACTCAGGATAGGTGA+AGG | - | chr1.2:52400333-52400352 | MS.gene038042:intron | 35.0% |
| !!! | GGTCGCTAATTTTTTCTGAT+TGG | + | chr1.2:52399575-52399594 | None:intergenic | 35.0% |
| !!! | TCAAACTCTTTTGGTTTTGG+AGG | - | chr1.2:52402993-52403012 | MS.gene038042:CDS | 35.0% |
| AAAGCTCTCATTCATGGGAA+TGG | - | chr1.2:52402572-52402591 | MS.gene038042:intron | 40.0% | |
| AACCAGTGACAACTACTCTT+CGG | + | chr1.2:52397723-52397742 | None:intergenic | 40.0% | |
| ACAAGGCCAGATTCTGTATT+TGG | - | chr1.2:52402915-52402934 | MS.gene038042:intron | 40.0% | |
| ACCCATATTTCATGCTAACG+TGG | + | chr1.2:52399262-52399281 | None:intergenic | 40.0% | |
| ACTCAAGTCCGAATTCTAAG+AGG | - | chr1.2:52400850-52400869 | MS.gene038042:intron | 40.0% | |
| AGTGGTAACCCAGAATTTCT+AGG | - | chr1.2:52401387-52401406 | MS.gene038042:intron | 40.0% | |
| ATTACTCAACCTCCTAGTGA+TGG | - | chr1.2:52400648-52400667 | MS.gene038042:intron | 40.0% | |
| ATTGGACATAGGGAGATTTG+CGG | + | chr1.2:52401415-52401434 | None:intergenic | 40.0% | |
| ATTGTATGTAGGTTTGGGCA+TGG | - | chr1.2:52397808-52397827 | MS.gene038042:intron | 40.0% | |
| ATTTCGTGGTTGAATTCACC+AGG | + | chr1.2:52398013-52398032 | None:intergenic | 40.0% | |
| ATTTGGGGATGCAGATGTTA+TGG | - | chr1.2:52399951-52399970 | MS.gene038042:intron | 40.0% | |
| CAAAGAAGGAGAACAGGAAT+TGG | + | chr1.2:52400416-52400435 | None:intergenic | 40.0% | |
| CATGCTACATCTACACCTTT+AGG | - | chr1.2:52402252-52402271 | MS.gene038042:intron | 40.0% | |
| CCATTGCCATAAGTTCTTAG+AGG | - | chr1.2:52398508-52398527 | MS.gene038042:intron | 40.0% | |
| CGTAATTTGAGAGAAGGAGA+GGG | + | chr1.2:52397753-52397772 | None:intergenic | 40.0% | |
| CTAAAGAAAACGAGCTAGCA+TGG | + | chr1.2:52402448-52402467 | None:intergenic | 40.0% | |
| CTGTGGCTACTATATAAGCT+TGG | - | chr1.2:52401126-52401145 | MS.gene038042:intron | 40.0% | |
| CTTATGACATGTCCAAAAGC+TGG | + | chr1.2:52398386-52398405 | None:intergenic | 40.0% | |
| GCAGGAACACAAAGAAAGAA+CGG | - | chr1.2:52398865-52398884 | MS.gene038042:intron | 40.0% | |
| GCCACGTTAGCATGAAATAT+GGG | - | chr1.2:52399258-52399277 | MS.gene038042:intron | 40.0% | |
| GCCATGTTTATCAATATCCG+TGG | + | chr1.2:52399233-52399252 | None:intergenic | 40.0% | |
| GTGGTAACCCAGAATTTCTA+GGG | - | chr1.2:52401388-52401407 | MS.gene038042:intron | 40.0% | |
| GTTGTGGAGTCCATAAAACT+TGG | - | chr1.2:52397843-52397862 | MS.gene038042:intron | 40.0% | |
| TAATGAGCTCCTGTAATTGC+TGG | - | chr1.2:52399331-52399350 | MS.gene038042:intron | 40.0% | |
| TACTTCCACTACAACTGCTA+TGG | + | chr1.2:52401368-52401387 | None:intergenic | 40.0% | |
| TAGATTAAGCATACAGGGTC+TGG | + | chr1.2:52402836-52402855 | None:intergenic | 40.0% | |
| TAGCATGAAATATGGGTTCC+AGG | - | chr1.2:52399265-52399284 | MS.gene038042:intron | 40.0% | |
| TATGTGAAAAGGTCAGTTCG+TGG | - | chr1.2:52399031-52399050 | MS.gene038042:intron | 40.0% | |
| TGAGAGCTTTCATCTAAGAG+GGG | + | chr1.2:52402562-52402581 | None:intergenic | 40.0% | |
| TTAAATTGCTGGAATCCGTG+AGG | + | chr1.2:52402296-52402315 | None:intergenic | 40.0% | |
| TTACTCAACCTCCTAGTGAT+GGG | - | chr1.2:52400649-52400668 | MS.gene038042:intron | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr1.2:52402073-52402092 | None:intergenic | 40.0% | |
| TTATATCCGAAGTGACAGGT+AGG | + | chr1.2:52399624-52399643 | None:intergenic | 40.0% | |
| TTCACCCTCAACTCTAACTT+TGG | - | chr1.2:52400949-52400968 | MS.gene038042:intron | 40.0% | |
| TTCCCTATTCCTGAATACAG+GGG | - | chr1.2:52399857-52399876 | MS.gene038042:intron | 40.0% | |
| TTTCGTGGTTGAATTCACCA+GGG | + | chr1.2:52398012-52398031 | None:intergenic | 40.0% | |
| TTTGGATGGAGGGTTTAGAA+GGG | - | chr1.2:52401857-52401876 | MS.gene038042:CDS | 40.0% | |
| ! | AAACTAAGGGTGTGTTTGGA+TGG | - | chr1.2:52401843-52401862 | MS.gene038042:CDS | 40.0% |
| ! | ACGGAGTGTTTGTTAGTAGT+TGG | + | chr1.2:52401524-52401543 | None:intergenic | 40.0% |
| ! | AGTTCTTTTGTGAAGAGTGG+TGG | + | chr1.2:52401219-52401238 | None:intergenic | 40.0% |
| ! | ATACTGTCATTTGAGTGAGC+TGG | + | chr1.2:52401441-52401460 | None:intergenic | 40.0% |
| ! | CCATGGTCTTAGAGTATGTT+TGG | + | chr1.2:52398478-52398497 | None:intergenic | 40.0% |
| ! | CCTCTAAGAACTTATGGCAA+TGG | + | chr1.2:52398511-52398530 | None:intergenic | 40.0% |
| ! | CTTTTCCATCAATGTCACTG+TGG | - | chr1.2:52401109-52401128 | MS.gene038042:intron | 40.0% |
| ! | GAAGAAACTAAGGGTGTGTT+TGG | - | chr1.2:52401839-52401858 | MS.gene038042:CDS | 40.0% |
| ! | GTTCTTTTGTGAAGAGTGGT+GGG | + | chr1.2:52401218-52401237 | None:intergenic | 40.0% |
| ! | GTTTGTTAGTAGTTGGAAGC+TGG | + | chr1.2:52401517-52401536 | None:intergenic | 40.0% |
| ! | TAAGCTTGGCTATTTGGTGA+TGG | - | chr1.2:52401140-52401159 | MS.gene038042:intron | 40.0% |
| ! | TACTGGTTGTGGCAAAAGTT+TGG | + | chr1.2:52401633-52401652 | None:intergenic | 40.0% |
| ! | TGTGTTTGGATTGAGGGTAT+AGG | + | chr1.2:52402067-52402086 | None:intergenic | 40.0% |
| ! | TTTGGATTGAGGGTATAGGA+GGG | + | chr1.2:52402063-52402082 | None:intergenic | 40.0% |
| !! | ATCTCCTTTGAAGCAGTCAA+TGG | + | chr1.2:52402954-52402973 | None:intergenic | 40.0% |
| !! | ATTAATCAGGGGGTGTCTAT+TGG | - | chr1.2:52398961-52398980 | MS.gene038042:intron | 40.0% |
| !! | CATGACTCGTGCTTTAAAAC+AGG | - | chr1.2:52400689-52400708 | MS.gene038042:CDS | 40.0% |
| !! | CCAAACATACTCTAAGACCA+TGG | - | chr1.2:52398475-52398494 | MS.gene038042:intron | 40.0% |
| !! | CTGATTCTGAAGTAGTTTGC+TGG | - | chr1.2:52399061-52399080 | MS.gene038042:intron | 40.0% |
| !! | TATCTAACCAGTACTGGTTG+TGG | + | chr1.2:52401644-52401663 | None:intergenic | 40.0% |
| !!! | CTGTTTTAAAGCACGAGTCA+TGG | + | chr1.2:52400691-52400710 | None:intergenic | 40.0% |
| !!! | TCCCTACTTTTTGCTTACTC+TGG | - | chr1.2:52403026-52403045 | MS.gene038042:CDS | 40.0% |
| AACTAGCAGCTATAGCGTAG+TGG | - | chr1.2:52401260-52401279 | MS.gene038042:intron | 45.0% | |
| ACAACTGCTATGGCTGAAAC+TGG | + | chr1.2:52401358-52401377 | None:intergenic | 45.0% | |
| ACCAGTGACAACTACTCTTC+GGG | + | chr1.2:52397722-52397741 | None:intergenic | 45.0% | |
| ACTCTTCGGGAAGAAACAAG+AGG | + | chr1.2:52397709-52397728 | None:intergenic | 45.0% | |
| AGACCTCGATGCTTGAATAG+TGG | + | chr1.2:52400992-52401011 | None:intergenic | 45.0% | |
| AGGCTCGACCTCTTAGAATT+CGG | + | chr1.2:52400861-52400880 | None:intergenic | 45.0% | |
| AGTAGCCACAGTGACATTGA+TGG | + | chr1.2:52401117-52401136 | None:intergenic | 45.0% | |
| AGTCAATCAGGACATACCTC+AGG | - | chr1.2:52399674-52399693 | MS.gene038042:intron | 45.0% | |
| AGTTAATGGAGCGATTCCCT+GGG | + | chr1.2:52402886-52402905 | None:intergenic | 45.0% | |
| ATCTACTAGCATAGTCCCCT+AGG | + | chr1.2:52398437-52398456 | None:intergenic | 45.0% | |
| ATGCAGAGATTCGTGGCTAT+GGG | - | chr1.2:52400519-52400538 | MS.gene038042:CDS | 45.0% | |
| CCATCTCGACCACTATCAAA+GGG | + | chr1.2:52400186-52400205 | None:intergenic | 45.0% | |
| CTCTCTCAAGTAGTCTCCTA+GGG | - | chr1.2:52398418-52398437 | MS.gene038042:CDS | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | + | chr1.2:52402074-52402093 | None:intergenic | 45.0% | |
| CTTGAGCATGCTAAAAACCG+AGG | - | chr1.2:52400485-52400504 | MS.gene038042:CDS | 45.0% | |
| GAAGGAGAACAGGAATTGGA+AGG | + | chr1.2:52400412-52400431 | None:intergenic | 45.0% | |
| GAGAGCTTTCATCTAAGAGG+GGG | + | chr1.2:52402561-52402580 | None:intergenic | 45.0% | |
| GATCTGCTTCACTTGCCTAA+AGG | + | chr1.2:52402270-52402289 | None:intergenic | 45.0% | |
| GATGCAGATGTTATGGTGAC+TGG | - | chr1.2:52399958-52399977 | MS.gene038042:intron | 45.0% | |
| GCGTAATTTGAGAGAAGGAG+AGG | + | chr1.2:52397754-52397773 | None:intergenic | 45.0% | |
| GCTACTGGGTCACATTCTAT+TGG | - | chr1.2:52399907-52399926 | MS.gene038042:intron | 45.0% | |
| GCTAGCATGGTCAGAGAATA+TGG | + | chr1.2:52402435-52402454 | None:intergenic | 45.0% | |
| GGCCACGTTAGCATGAAATA+TGG | - | chr1.2:52399257-52399276 | MS.gene038042:intron | 45.0% | |
| GTTTGGATGGAGGGTTTAGA+AGG | - | chr1.2:52401856-52401875 | MS.gene038042:CDS | 45.0% | |
| TATGCAGAGATTCGTGGCTA+TGG | - | chr1.2:52400518-52400537 | MS.gene038042:CDS | 45.0% | |
| TCACGGATCGATGTTCCTAA+GGG | + | chr1.2:52398775-52398794 | None:intergenic | 45.0% | |
| TCCATCTCGACCACTATCAA+AGG | + | chr1.2:52400187-52400206 | None:intergenic | 45.0% | |
| TCTCTCAAGTAGTCTCCTAG+GGG | - | chr1.2:52398419-52398438 | MS.gene038042:CDS | 45.0% | |
| TCTTTGTGTTCCTGCTCAGT+GGG | + | chr1.2:52398860-52398879 | None:intergenic | 45.0% | |
| TGATGTCAAGTCGTCAACCA+GGG | + | chr1.2:52401043-52401062 | None:intergenic | 45.0% | |
| TTATGGACTCCACAACCAAG+AGG | + | chr1.2:52397839-52397858 | None:intergenic | 45.0% | |
| TTCAGCCATAGCAGTTGTAG+TGG | - | chr1.2:52401360-52401379 | MS.gene038042:intron | 45.0% | |
| TTCTTTGTGTTCCTGCTCAG+TGG | + | chr1.2:52398861-52398880 | None:intergenic | 45.0% | |
| TTGCGGACCCTAGAAATTCT+GGG | + | chr1.2:52401398-52401417 | None:intergenic | 45.0% | |
| TTGGATGGAGGGTTTAGAAG+GGG | - | chr1.2:52401858-52401877 | MS.gene038042:CDS | 45.0% | |
| TTTGCGGACCCTAGAAATTC+TGG | + | chr1.2:52401399-52401418 | None:intergenic | 45.0% | |
| ! | ACATTTTGTGTGCGAGTCAC+GGG | - | chr1.2:52402767-52402786 | MS.gene038042:CDS | 45.0% |
| ! | ACTTTTGCCACAACCAGTAC+TGG | - | chr1.2:52401634-52401653 | MS.gene038042:intron | 45.0% |
| ! | AGCAGTTGTAGTGGAAGTAG+TGG | - | chr1.2:52401369-52401388 | MS.gene038042:intron | 45.0% |
| ! | ATGATTTGGCCCCTGTATTC+AGG | + | chr1.2:52399869-52399888 | None:intergenic | 45.0% |
| ! | CATGCCATTGACTGCTTCAA+AGG | - | chr1.2:52402947-52402966 | MS.gene038042:CDS | 45.0% |
| ! | GACATTTTGTGTGCGAGTCA+CGG | - | chr1.2:52402766-52402785 | MS.gene038042:CDS | 45.0% |
| ! | GTTTGGATTGAGGGTATAGG+AGG | + | chr1.2:52402064-52402083 | None:intergenic | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr1.2:52401847-52401866 | MS.gene038042:CDS | 45.0% |
| ! | TAATTGGTTTCCCACTGAGC+AGG | - | chr1.2:52398847-52398866 | MS.gene038042:intron | 45.0% |
| ! | TACACTTTTGGCACTGCAGA+TGG | + | chr1.2:52398608-52398627 | None:intergenic | 45.0% |
| ! | TCTTACCTTGGTGGATGAGA+AGG | + | chr1.2:52402471-52402490 | None:intergenic | 45.0% |
| ! | TGACCACTATTCAAGCATCG+AGG | - | chr1.2:52400986-52401005 | MS.gene038042:intron | 45.0% |
| ! | TTGGATTGAGGGTATAGGAG+GGG | + | chr1.2:52402062-52402081 | None:intergenic | 45.0% |
| ! | TTTAGCCTTCTCATCCACCA+AGG | - | chr1.2:52402463-52402482 | MS.gene038042:intron | 45.0% |
| !! | ACTATTCAAGCATCGAGGTC+TGG | - | chr1.2:52400991-52401010 | MS.gene038042:intron | 45.0% |
| !!! | CTGCATAGATTTTGGCTCCT+CGG | + | chr1.2:52400505-52400524 | None:intergenic | 45.0% |
| !!! | TTTTGTGAAGAGTGGTGGGT+GGG | + | chr1.2:52401214-52401233 | None:intergenic | 45.0% |
| AGCTCCTGTAATTGCTGGAC+AGG | - | chr1.2:52399336-52399355 | MS.gene038042:intron | 50.0% | |
| AGGAACATCGATCCGTGACA+AGG | - | chr1.2:52398777-52398796 | MS.gene038042:intron | 50.0% | |
| ATCCGAAGTGACAGGTAGGA+AGG | + | chr1.2:52399620-52399639 | None:intergenic | 50.0% | |
| ATGGAGGGTTTAGAAGGGGA+AGG | - | chr1.2:52401862-52401881 | MS.gene038042:CDS | 50.0% | |
| ATGGTGACACCTCTTGGTTG+TGG | - | chr1.2:52397827-52397846 | MS.gene038042:intron | 50.0% | |
| ATTCGTGGCTATGGGATGTC+AGG | - | chr1.2:52400527-52400546 | MS.gene038042:CDS | 50.0% | |
| ATTGCTGGAATCCGTGAGGA+TGG | + | chr1.2:52402292-52402311 | None:intergenic | 50.0% | |
| ATTTGAGTGAGCTGGCGCAT+TGG | + | chr1.2:52401433-52401452 | None:intergenic | 50.0% | |
| CAATCAGGACATACCTCAGG+TGG | - | chr1.2:52399677-52399696 | MS.gene038042:intron | 50.0% | |
| CTCAGGATAGGTGAAGGTTC+TGG | - | chr1.2:52400339-52400358 | MS.gene038042:intron | 50.0% | |
| CTCATCCACCAAGGTAAGAG+TGG | - | chr1.2:52402472-52402491 | MS.gene038042:intron | 50.0% | |
| CTTCGGGAAGAAACAAGAGG+AGG | + | chr1.2:52397706-52397725 | None:intergenic | 50.0% | |
| GAAGAAACAAGAGGAGGAGG+TGG | + | chr1.2:52397700-52397719 | None:intergenic | 50.0% | |
| GACGACTTGACATCACCCAA+AGG | - | chr1.2:52401048-52401067 | MS.gene038042:intron | 50.0% | |
| GAGTTAATGGAGCGATTCCC+TGG | + | chr1.2:52402887-52402906 | None:intergenic | 50.0% | |
| GCAGATGTTATGGTGACTGG+AGG | - | chr1.2:52399961-52399980 | MS.gene038042:intron | 50.0% | |
| GCAGTGACTGCAGCATGATT+TGG | + | chr1.2:52399883-52399902 | None:intergenic | 50.0% | |
| GCTCTCTCAAGTAGTCTCCT+AGG | - | chr1.2:52398417-52398436 | MS.gene038042:CDS | 50.0% | |
| GCTTGCAACCACTCTTACCT+TGG | + | chr1.2:52402483-52402502 | None:intergenic | 50.0% | |
| GGAAAAGACAAAGGGGGAGA+TGG | + | chr1.2:52401096-52401115 | None:intergenic | 50.0% | |
| GGCCCCTGTATTCAGGAATA+GGG | + | chr1.2:52399862-52399881 | None:intergenic | 50.0% | |
| GGGAACAAGTGCAGCAACTT+TGG | + | chr1.2:52397978-52397997 | None:intergenic | 50.0% | |
| GTCACGGATCGATGTTCCTA+AGG | + | chr1.2:52398776-52398795 | None:intergenic | 50.0% | |
| GTGAAGCAGATCCATCCTCA+CGG | - | chr1.2:52402278-52402297 | MS.gene038042:intron | 50.0% | |
| GTGATGTCAAGTCGTCAACC+AGG | + | chr1.2:52401044-52401063 | None:intergenic | 50.0% | |
| GTTGCCTGTCCAGCAATTAC+AGG | + | chr1.2:52399343-52399362 | None:intergenic | 50.0% | |
| TCCCGAAGAGTAGTTGTCAC+TGG | - | chr1.2:52397718-52397737 | MS.gene038042:CDS | 50.0% | |
| TGAGTCTAACTCAGCCCCAA+AGG | + | chr1.2:52400835-52400854 | None:intergenic | 50.0% | |
| TGCAACCACTCTTACCTTGG+TGG | + | chr1.2:52402480-52402499 | None:intergenic | 50.0% | |
| TGCTTACTCTGGATCGGACT+AGG | - | chr1.2:52403037-52403056 | MS.gene038042:CDS | 50.0% | |
| TGGAGGGTTTAGAAGGGGAA+GGG | - | chr1.2:52401863-52401882 | MS.gene038042:CDS | 50.0% | |
| TGGCCCCTGTATTCAGGAAT+AGG | + | chr1.2:52399863-52399882 | None:intergenic | 50.0% | |
| ! | ATTGAGGGTATAGGAGGGGA+AGG | + | chr1.2:52402058-52402077 | None:intergenic | 50.0% |
| ! | CAGTCACTGCTTGTGCTACT+GGG | - | chr1.2:52399893-52399912 | MS.gene038042:intron | 50.0% |
| ! | CATTTTGTGTGCGAGTCACG+GGG | - | chr1.2:52402768-52402787 | MS.gene038042:CDS | 50.0% |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | - | chr1.2:52401846-52401865 | MS.gene038042:CDS | 50.0% |
| ! | CTCCTTCCTACCTGTCACTT+CGG | - | chr1.2:52399615-52399634 | MS.gene038042:intron | 50.0% |
| ! | GGAACATCGCGAAGGGTTTT+GGG | - | chr1.2:52397640-52397659 | MS.gene038042:CDS | 50.0% |
| ! | TTGAGGGTATAGGAGGGGAA+GGG | + | chr1.2:52402057-52402076 | None:intergenic | 50.0% |
| !! | AATCAGGGGGTGTCTATTGG+TGG | - | chr1.2:52398964-52398983 | MS.gene038042:intron | 50.0% |
| !! | AGGTGAAGGTTCTGGAGTCT+TGG | - | chr1.2:52400347-52400366 | MS.gene038042:intron | 50.0% |
| !! | AGGTTCTGGAGTCTTGGTCT+TGG | - | chr1.2:52400353-52400372 | MS.gene038042:intron | 50.0% |
| !! | ATCAGGGGGTGTCTATTGGT+GGG | - | chr1.2:52398965-52398984 | MS.gene038042:intron | 50.0% |
| !! | ATTCAAGCATCGAGGTCTGG+CGG | - | chr1.2:52400994-52401013 | MS.gene038042:intron | 50.0% |
| !! | CACTGATTTCAGGGGGCTAT+TGG | - | chr1.2:52402668-52402687 | MS.gene038042:CDS | 50.0% |
| !! | CCCTTTGATAGTGGTCGAGA+TGG | - | chr1.2:52400183-52400202 | MS.gene038042:intron | 50.0% |
| !! | CTTTTGTGAAGAGTGGTGGG+TGG | + | chr1.2:52401215-52401234 | None:intergenic | 50.0% |
| !! | TCACCAGGGTTAGTTCCAGT+GGG | + | chr1.2:52397998-52398017 | None:intergenic | 50.0% |
| !! | TTCACCAGGGTTAGTTCCAG+TGG | + | chr1.2:52397999-52398018 | None:intergenic | 50.0% |
| !! | TTCTGGAGTCTTGGTCTTGG+AGG | - | chr1.2:52400356-52400375 | MS.gene038042:intron | 50.0% |
| AGCACGAGTCATGGCCAGAA+TGG | + | chr1.2:52400682-52400701 | None:intergenic | 55.0% | |
| AGGGCAAGAGCTAAGGCTTG+AGG | + | chr1.2:52400881-52400900 | None:intergenic | 55.0% | |
| AGGGTTTAGAAGGGGAAGGG+AGG | - | chr1.2:52401866-52401885 | MS.gene038042:CDS | 55.0% | |
| ATGGCACCTCTCCCATCACT+AGG | + | chr1.2:52400663-52400682 | None:intergenic | 55.0% | |
| CAATGGAAGCTTGTCCACCC+TGG | - | chr1.2:52401023-52401042 | MS.gene038042:intron | 55.0% | |
| CGACGAAGACGCTGCATACA+GGG | + | chr1.2:52399191-52399210 | None:intergenic | 55.0% | |
| CGCTGCATACAGGGGAGAAT+AGG | + | chr1.2:52399182-52399201 | None:intergenic | 55.0% | |
| CGGGAAGAAACAAGAGGAGG+AGG | + | chr1.2:52397703-52397722 | None:intergenic | 55.0% | |
| GACGAAGACGCTGCATACAG+GGG | + | chr1.2:52399190-52399209 | None:intergenic | 55.0% | |
| GAGCTGGCGCATTGGACATA+GGG | + | chr1.2:52401425-52401444 | None:intergenic | 55.0% | |
| GCAATGGCAGCTTTGCACCA+TGG | + | chr1.2:52398495-52398514 | None:intergenic | 55.0% | |
| GCAGTCACTGCTTGTGCTAC+TGG | - | chr1.2:52399892-52399911 | MS.gene038042:intron | 55.0% | |
| GGGGCTATTGGTCATCTCCT+TGG | - | chr1.2:52402680-52402699 | MS.gene038042:CDS | 55.0% | |
| GGGTTTAGAAGGGGAAGGGA+GGG | - | chr1.2:52401867-52401886 | MS.gene038042:CDS | 55.0% | |
| GGTTTAGAAGGGGAAGGGAG+GGG | - | chr1.2:52401868-52401887 | MS.gene038042:CDS | 55.0% | |
| GTGTCTATTGGTGGGGGAAC+TGG | - | chr1.2:52398973-52398992 | MS.gene038042:intron | 55.0% | |
| GTTCCCACTGGAACTAACCC+TGG | - | chr1.2:52397992-52398011 | MS.gene038042:intron | 55.0% | |
| GTTGCTGCACTTGTTCCCAC+TGG | - | chr1.2:52397980-52397999 | MS.gene038042:CDS | 55.0% | |
| TGAGCTGGCGCATTGGACAT+AGG | + | chr1.2:52401426-52401445 | None:intergenic | 55.0% | |
| TGTCAAGTCGTCAACCAGGG+TGG | + | chr1.2:52401040-52401059 | None:intergenic | 55.0% | |
| TTGGGAGAGGGCAAGAGCTA+AGG | + | chr1.2:52400888-52400907 | None:intergenic | 55.0% | |
| TTGGGCATGGTGACACCTCT+TGG | - | chr1.2:52397821-52397840 | MS.gene038042:intron | 55.0% | |
| ! | AAAGGCTAGCTCATGGGGTG+AGG | + | chr1.2:52400817-52400836 | None:intergenic | 55.0% |
| ! | AAGGCTAGCTCATGGGGTGA+GGG | + | chr1.2:52400816-52400835 | None:intergenic | 55.0% |
| ! | AGCCCCAAAGGCTAGCTCAT+GGG | + | chr1.2:52400823-52400842 | None:intergenic | 55.0% |
| ! | CAACCTCCTAGTGATGGGAG+AGG | - | chr1.2:52400654-52400673 | MS.gene038042:intron | 55.0% |
| ! | CGGAACATCGCGAAGGGTTT+TGG | - | chr1.2:52397639-52397658 | MS.gene038042:CDS | 55.0% |
| !! | ACCCCATGAGCTAGCCTTTG+GGG | - | chr1.2:52400818-52400837 | MS.gene038042:intron | 55.0% |
| !! | AGGTCTGGCGGTTTTGGCAA+TGG | - | chr1.2:52401006-52401025 | MS.gene038042:intron | 55.0% |
| !! | CAAGCCCACAAGAAGCATCG+CGG | - | chr1.2:52400160-52400179 | MS.gene038042:CDS | 55.0% |
| !! | CACCCCATGAGCTAGCCTTT+GGG | - | chr1.2:52400817-52400836 | MS.gene038042:intron | 55.0% |
| !! | TCACCCCATGAGCTAGCCTT+TGG | - | chr1.2:52400816-52400835 | MS.gene038042:intron | 55.0% |
| !! | TCAGGGGGTGTCTATTGGTG+GGG | - | chr1.2:52398966-52398985 | MS.gene038042:intron | 55.0% |
| !! | TGATGGGAGAGGTGCCATTC+TGG | - | chr1.2:52400665-52400684 | MS.gene038042:CDS | 55.0% |
| AAGGGCCGCGATGCTTCTTG+TGG | + | chr1.2:52400168-52400187 | None:intergenic | 60.0% | |
| AGGGCCGCGATGCTTCTTGT+GGG | + | chr1.2:52400167-52400186 | None:intergenic | 60.0% | |
| AGGGTATAGGAGGGGAAGGG+AGG | + | chr1.2:52402054-52402073 | None:intergenic | 60.0% | |
| CAACAGCTCCAGCAGCACCA+AGG | + | chr1.2:52402700-52402719 | None:intergenic | 60.0% | |
| GCACCTCTCCCATCACTAGG+AGG | + | chr1.2:52400660-52400679 | None:intergenic | 60.0% | |
| GCATCGCGGCCCTTTGATAG+TGG | - | chr1.2:52400174-52400193 | MS.gene038042:CDS | 60.0% | |
| GCGACGAAGACGCTGCATAC+AGG | + | chr1.2:52399192-52399211 | None:intergenic | 60.0% | |
| GGGTATAGGAGGGGAAGGGA+GGG | + | chr1.2:52402053-52402072 | None:intergenic | 60.0% | |
| GGTATAGGAGGGGAAGGGAG+GGG | + | chr1.2:52402052-52402071 | None:intergenic | 60.0% | |
| TAGAAGGGGAAGGGAGGGGA+GGG | - | chr1.2:52401872-52401891 | MS.gene038042:CDS | 60.0% | |
| TTAGAAGGGGAAGGGAGGGG+AGG | - | chr1.2:52401871-52401890 | MS.gene038042:CDS | 60.0% | |
| ! | CAGCCCCAAAGGCTAGCTCA+TGG | + | chr1.2:52400824-52400843 | None:intergenic | 60.0% |
| ! | GCATCGAGGTCTGGCGGTTT+TGG | - | chr1.2:52401000-52401019 | MS.gene038042:intron | 60.0% |
| ! | GCCCCAAAGGCTAGCTCATG+GGG | + | chr1.2:52400822-52400841 | None:intergenic | 60.0% |
| !! | CAGGGGGTGTCTATTGGTGG+GGG | - | chr1.2:52398967-52398986 | MS.gene038042:intron | 60.0% |
| !! | GGTAAGGGCACTGCGTTTGG+AGG | - | chr1.2:52397892-52397911 | MS.gene038042:intron | 60.0% |
| !! | GGTCATCTCCTTGGTGCTGC+TGG | - | chr1.2:52402689-52402708 | MS.gene038042:CDS | 60.0% |
| !! | TGGGGTAAGGGCACTGCGTT+TGG | - | chr1.2:52397889-52397908 | MS.gene038042:intron | 60.0% |
| ATAGGAGGGGAAGGGAGGGG+AGG | + | chr1.2:52402049-52402068 | None:intergenic | 65.0% | |
| ! | GCGTGGCGGAACATCGCGAA+GGG | - | chr1.2:52397633-52397652 | MS.gene038042:CDS | 65.0% |
| ! | TGCGTGGCGGAACATCGCGA+AGG | - | chr1.2:52397632-52397651 | MS.gene038042:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 52397625 | 52403058 | 52397625 | ID=MS.gene038042 |
| chr1.2 | mRNA | 52397625 | 52403058 | 52397625 | ID=MS.gene038042.t1;Parent=MS.gene038042 |
| chr1.2 | exon | 52402944 | 52403058 | 52402944 | ID=MS.gene038042.t1.exon1;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52402944 | 52403058 | 52402944 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52402635 | 52402864 | 52402635 | ID=MS.gene038042.t1.exon2;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52402635 | 52402864 | 52402635 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52401797 | 52401904 | 52401797 | ID=MS.gene038042.t1.exon3;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52401797 | 52401904 | 52401797 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52401642 | 52401713 | 52401642 | ID=MS.gene038042.t1.exon4;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52401642 | 52401713 | 52401642 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52401397 | 52401483 | 52401397 | ID=MS.gene038042.t1.exon5;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52401397 | 52401483 | 52401397 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52400655 | 52400806 | 52400655 | ID=MS.gene038042.t1.exon6;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52400655 | 52400806 | 52400655 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52400472 | 52400552 | 52400472 | ID=MS.gene038042.t1.exon7;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52400472 | 52400552 | 52400472 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52400306 | 52400339 | 52400306 | ID=MS.gene038042.t1.exon8;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52400306 | 52400339 | 52400306 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52400135 | 52400201 | 52400135 | ID=MS.gene038042.t1.exon9;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52400135 | 52400201 | 52400135 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52399973 | 52400049 | 52399973 | ID=MS.gene038042.t1.exon10;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52399973 | 52400049 | 52399973 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52398410 | 52398470 | 52398410 | ID=MS.gene038042.t1.exon11;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52398410 | 52398470 | 52398410 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52398199 | 52398281 | 52398199 | ID=MS.gene038042.t1.exon12;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52398199 | 52398281 | 52398199 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52397932 | 52398003 | 52397932 | ID=MS.gene038042.t1.exon13;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52397932 | 52398003 | 52397932 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| chr1.2 | exon | 52397625 | 52397795 | 52397625 | ID=MS.gene038042.t1.exon14;Parent=MS.gene038042.t1 |
| chr1.2 | CDS | 52397625 | 52397795 | 52397625 | ID=cds.MS.gene038042.t1;Parent=MS.gene038042.t1 |
| Gene Sequence |
| Protein sequence |
