Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89534.t1 | XP_013468411.1 | 94.9 | 474 | 18 | 2 | 1 | 469 | 1 | 473 | 2.50E-252 | 880.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89534.t1 | Q8L3X9 | 77.0 | 434 | 97 | 1 | 31 | 464 | 29 | 459 | 2.2e-196 | 686.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89534.t1 | A0A072VM15 | 94.9 | 474 | 18 | 2 | 1 | 469 | 1 | 473 | 1.8e-252 | 880.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene89534 | MS.gene36484 | PPI |
| MS.gene89534 | MS.gene070951 | PPI |
| MS.gene89534 | MS.gene023146 | PPI |
| MS.gene89534 | MS.gene35149 | PPI |
| MS.gene95807 | MS.gene89534 | PPI |
| MS.gene89534 | MS.gene34377 | PPI |
| MS.gene89534 | MS.gene028308 | PPI |
| MS.gene89534 | MS.gene006411 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89534.t1 | MTR_1g069385 | 95.992 | 474 | 13 | 2 | 1 | 469 | 1 | 473 | 0.0 | 928 |
| MS.gene89534.t1 | MTR_1g069385 | 98.571 | 350 | 5 | 0 | 120 | 469 | 1 | 350 | 0.0 | 706 |
| MS.gene89534.t1 | MTR_4g124880 | 41.458 | 439 | 220 | 8 | 33 | 464 | 80 | 488 | 3.04e-92 | 288 |
| MS.gene89534.t1 | MTR_2g043530 | 38.877 | 463 | 256 | 7 | 4 | 464 | 48 | 485 | 1.49e-91 | 286 |
| MS.gene89534.t1 | MTR_1g103020 | 38.479 | 434 | 240 | 6 | 33 | 464 | 60 | 468 | 1.71e-91 | 286 |
| MS.gene89534.t1 | MTR_4g124880 | 45.115 | 348 | 178 | 5 | 122 | 464 | 3 | 342 | 8.88e-91 | 280 |
| MS.gene89534.t1 | MTR_8g099695 | 36.129 | 465 | 263 | 7 | 9 | 464 | 39 | 478 | 3.10e-90 | 283 |
| MS.gene89534.t1 | MTR_4g096690 | 39.171 | 434 | 237 | 7 | 33 | 464 | 58 | 466 | 6.84e-88 | 276 |
| MS.gene89534.t1 | MTR_2g043530 | 39.059 | 425 | 232 | 7 | 4 | 426 | 48 | 447 | 3.69e-81 | 258 |
| MS.gene89534.t1 | MTR_8g099715 | 33.565 | 432 | 213 | 9 | 33 | 464 | 33 | 390 | 6.88e-70 | 228 |
| MS.gene89534.t1 | MTR_8g099700 | 31.418 | 261 | 130 | 5 | 33 | 291 | 76 | 289 | 5.94e-32 | 124 |
| MS.gene89534.t1 | MTR_8g099705 | 45.545 | 101 | 52 | 1 | 321 | 421 | 1 | 98 | 3.37e-19 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89534.t1 | AT2G04540 | 76.959 | 434 | 97 | 1 | 31 | 464 | 29 | 459 | 0.0 | 687 |
| MS.gene89534.t1 | AT5G46290 | 38.710 | 434 | 239 | 6 | 33 | 464 | 61 | 469 | 4.56e-92 | 288 |
| MS.gene89534.t1 | AT5G46290 | 37.556 | 450 | 238 | 7 | 33 | 464 | 61 | 485 | 2.74e-89 | 281 |
| MS.gene89534.t1 | AT1G74960 | 38.839 | 448 | 243 | 7 | 21 | 464 | 118 | 538 | 2.01e-87 | 278 |
| MS.gene89534.t1 | AT1G74960 | 38.839 | 448 | 243 | 7 | 21 | 464 | 118 | 538 | 2.01e-87 | 278 |
| MS.gene89534.t1 | AT1G74960 | 38.839 | 448 | 243 | 7 | 21 | 464 | 118 | 538 | 2.01e-87 | 278 |
| MS.gene89534.t1 | AT5G46290 | 34.101 | 434 | 204 | 8 | 33 | 464 | 61 | 414 | 2.99e-66 | 219 |
Find 111 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGATATGCTTCGGTAAA+TGG | 0.144969 | 1.1:+51055595 | None:intergenic |
| CGGAACATCGCGAAGGGTTT+TGG | 0.152340 | 1.1:-51055621 | MS.gene89534:CDS |
| ACAAGGCCAGATTCTGTATT+TGG | 0.163247 | 1.1:-51050357 | MS.gene89534:CDS |
| GTGAATTCAACCACGAAATT+TGG | 0.170597 | 1.1:-51055244 | MS.gene89534:CDS |
| CGAAATTTGGCTTAATTCTA+AGG | 0.209556 | 1.1:-51055231 | MS.gene89534:intron |
| ACGAATCTCTCCATAGATTT+TGG | 0.215851 | 1.1:+51052748 | None:intergenic |
| GCAATGAGAATGATTCAATT+TGG | 0.244331 | 1.1:-51053322 | MS.gene89534:CDS |
| GCAGTCACTGCTTGTGCTAC+TGG | 0.246599 | 1.1:-51053364 | MS.gene89534:CDS |
| AAGCTCTTAAAGATTCTAAT+TGG | 0.267158 | 1.1:-51054431 | MS.gene89534:CDS |
| ACTTGGAACCAACTAATTAA+TGG | 0.270968 | 1.1:-51055398 | MS.gene89534:CDS |
| CAATGAGAATGATTCAATTT+GGG | 0.278917 | 1.1:-51053321 | MS.gene89534:CDS |
| TTTGACATAGCTACTCTAAT+TGG | 0.296884 | 1.1:+51050297 | None:intergenic |
| GTAGCTATGTCAAACTCTTT+TGG | 0.297068 | 1.1:-51050288 | MS.gene89534:CDS |
| ATTGATGCATTATCAATTGC+AGG | 0.313043 | 1.1:-51053259 | MS.gene89534:CDS |
| GGCCACGTTAGCATGAAATA+TGG | 0.325924 | 1.1:-51054003 | MS.gene89534:CDS |
| TGGGGTAAGGGCACTGCGTT+TGG | 0.333218 | 1.1:-51055369 | MS.gene89534:CDS |
| CTTGTTAAATTAAGAGTTAA+TGG | 0.337796 | 1.1:+51050375 | None:intergenic |
| GGTCATCTCCTTGGTGCTGC+TGG | 0.343211 | 1.1:-51050583 | MS.gene89534:CDS |
| GCTAGCATGGTCAGAGAATA+TGG | 0.347485 | 1.1:+51050851 | None:intergenic |
| AACCGAGGAGCCAAAATCTA+TGG | 0.349757 | 1.1:-51052758 | MS.gene89534:CDS |
| TGATGGGAGAGGTGCCATTC+TGG | 0.350310 | 1.1:-51052593 | MS.gene89534:CDS |
| AGAATCTTTAAGAGCTTCAT+TGG | 0.361076 | 1.1:+51054437 | None:intergenic |
| CTCAGGATAGGTGAAGGTTC+TGG | 0.377739 | 1.1:-51052917 | MS.gene89534:intron |
| GGGAACAAGCGCAGCAACTT+TGG | 0.389547 | 1.1:+51055283 | None:intergenic |
| TTGTCACCAAATACAGAATC+TGG | 0.389800 | 1.1:+51050351 | None:intergenic |
| GCAGTGACTGCAGCATGATT+TGG | 0.395312 | 1.1:+51053376 | None:intergenic |
| ACCGGTGACAACTACTCTTC+GGG | 0.405117 | 1.1:+51055541 | None:intergenic |
| CATGACTCGTGCTTTAAAAC+AGG | 0.411211 | 1.1:-51052569 | MS.gene89534:intron |
| GCTACTGGGTCACATTCTAT+TGG | 0.420147 | 1.1:-51053349 | MS.gene89534:CDS |
| TAGCATGAAATATGGGTTCC+AGG | 0.420812 | 1.1:-51053995 | MS.gene89534:intron |
| CATGCCATTGACTGCTTCAA+AGG | 0.421259 | 1.1:-51050325 | MS.gene89534:CDS |
| TATGGAGAGATTCGTGGCTA+TGG | 0.423675 | 1.1:-51052740 | MS.gene89534:CDS |
| ATTTGGGGATGCAGATGTTA+TGG | 0.426257 | 1.1:-51053305 | MS.gene89534:CDS |
| TAGAATTAAGCCAAATTTCG+TGG | 0.428412 | 1.1:+51055234 | None:intergenic |
| CAGTCACTGCTTGTGCTACT+GGG | 0.430249 | 1.1:-51053363 | MS.gene89534:CDS |
| TCCTTGTGTTCCTGCTCAGT+GGG | 0.431783 | 1.1:+51054405 | None:intergenic |
| GGGGCTATTGGTCATCTCCT+TGG | 0.431894 | 1.1:-51050592 | MS.gene89534:CDS |
| AACCGGTGACAACTACTCTT+CGG | 0.433030 | 1.1:+51055540 | None:intergenic |
| AGGTTCTGGAGTCTTGGTCT+TGG | 0.434365 | 1.1:-51052903 | MS.gene89534:CDS |
| AATTGATAATGCATCAATAC+TGG | 0.442107 | 1.1:+51053264 | None:intergenic |
| TTCTGGAGTCTTGGTCTTGG+AGG | 0.446638 | 1.1:-51052900 | MS.gene89534:intron |
| AAGCTTTATCTGATATGCTT+CGG | 0.465093 | 1.1:+51055588 | None:intergenic |
| TTGGGCATGGTGACACCTCT+TGG | 0.467880 | 1.1:-51055437 | MS.gene89534:CDS |
| TTAATGGAAAATGTGGGGTA+AGG | 0.468366 | 1.1:-51055382 | MS.gene89534:CDS |
| GTTGCTGCGCTTGTTCCCAC+TGG | 0.470441 | 1.1:-51055278 | MS.gene89534:CDS |
| CATTAACTCTTAATTTAACA+AGG | 0.477564 | 1.1:-51050374 | MS.gene89534:CDS |
| CATGCTACATCTACACCTTT+AGG | 0.481993 | 1.1:-51051032 | MS.gene89534:intron |
| AAGGGCCGCGATGCTTCTTG+TGG | 0.483481 | 1.1:+51053091 | None:intergenic |
| TAATTGGTTTCCCACTGAGC+AGG | 0.484051 | 1.1:-51054415 | MS.gene89534:CDS |
| CAACTAATTAATGGAAAATG+TGG | 0.484527 | 1.1:-51055389 | MS.gene89534:CDS |
| TAATGGAAAATGTGGGGTAA+GGG | 0.484865 | 1.1:-51055381 | MS.gene89534:CDS |
| ATTCGTGGCTATGGGATGTC+AGG | 0.488176 | 1.1:-51052731 | MS.gene89534:intron |
| GCATCGCGGCCCTTTGATAG+TGG | 0.490347 | 1.1:-51053082 | MS.gene89534:CDS |
| GGTAAGGGCACTGCGTTTGG+AGG | 0.494902 | 1.1:-51055366 | MS.gene89534:CDS |
| AGGTGAAGGTTCTGGAGTCT+TGG | 0.497176 | 1.1:-51052909 | MS.gene89534:CDS |
| AGGGCCGCGATGCTTCTTGT+GGG | 0.506418 | 1.1:+51053092 | None:intergenic |
| CCCTTTGATAGTGGTCGAGA+TGG | 0.506777 | 1.1:-51053073 | MS.gene89534:CDS |
| GTTGTGGAGTCCATAAAACT+TGG | 0.511122 | 1.1:-51055415 | MS.gene89534:CDS |
| ATTTCGTGGTTGAATTCACC+AGG | 0.512525 | 1.1:+51055248 | None:intergenic |
| ATATTGATAAACATGGCATC+AGG | 0.513692 | 1.1:-51054024 | MS.gene89534:CDS |
| GCCACGTTAGCATGAAATAT+GGG | 0.514383 | 1.1:-51054002 | MS.gene89534:CDS |
| TGCAACCACTCTTACCTTGG+TGG | 0.516765 | 1.1:+51050806 | None:intergenic |
| GATGCAGATGTTATGGTGAC+TGG | 0.517325 | 1.1:-51053298 | MS.gene89534:CDS |
| TGCTCAACTGATATGTGAAA+AGG | 0.518775 | 1.1:-51054242 | MS.gene89534:intron |
| ATGGAGAGATTCGTGGCTAT+GGG | 0.522380 | 1.1:-51052739 | MS.gene89534:CDS |
| AACTAATTAATGGAAAATGT+GGG | 0.522501 | 1.1:-51055388 | MS.gene89534:CDS |
| ATCTCCTTTGAAGCAGTCAA+TGG | 0.522727 | 1.1:+51050321 | None:intergenic |
| TTCCTTGTGTTCCTGCTCAG+TGG | 0.523925 | 1.1:+51054404 | None:intergenic |
| TCCCGAAGAGTAGTTGTCAC+CGG | 0.532836 | 1.1:-51055542 | MS.gene89534:intron |
| TCCATCTCGACCACTATCAA+AGG | 0.533832 | 1.1:+51053072 | None:intergenic |
| TCTTACCTTGGTGGATGAGA+AGG | 0.535724 | 1.1:+51050815 | None:intergenic |
| TTCACCAGGGTTAGTTCCAG+TGG | 0.540554 | 1.1:+51055262 | None:intergenic |
| GAAGAAACAAGAGGAGGAGG+TGG | 0.549891 | 1.1:+51055563 | None:intergenic |
| AGCACGAGTCATGGCCAGAA+TGG | 0.551728 | 1.1:+51052579 | None:intergenic |
| ATTACTCAACCTCCTAGTGA+TGG | 0.557704 | 1.1:-51052610 | MS.gene89534:CDS |
| GGAAGTCAATTGATCAAATG+TGG | 0.558097 | 1.1:+51055304 | None:intergenic |
| TTGATGTAATCTACATCAGA+AGG | 0.558485 | 1.1:+51051059 | None:intergenic |
| TAATGCATCAATACTGGACT+CGG | 0.561888 | 1.1:+51053270 | None:intergenic |
| CTAAAGAAGACGAGCTAGCA+TGG | 0.562258 | 1.1:+51050838 | None:intergenic |
| CGGGAAGAAACAAGAGGAGG+AGG | 0.573055 | 1.1:+51055560 | None:intergenic |
| CCATCTCGACCACTATCAAA+GGG | 0.575537 | 1.1:+51053073 | None:intergenic |
| AAAATCTATGGAGAGATTCG+TGG | 0.583004 | 1.1:-51052746 | MS.gene89534:CDS |
| TTACTCAACCTCCTAGTGAT+GGG | 0.586083 | 1.1:-51052609 | MS.gene89534:CDS |
| TCCCACTGAGCAGGAACACA+AGG | 0.586433 | 1.1:-51054406 | MS.gene89534:CDS |
| ATGGCACCTCTCCCATCACT+AGG | 0.594673 | 1.1:+51052598 | None:intergenic |
| GTTCCCACTGGAACTAACCC+TGG | 0.597954 | 1.1:-51055266 | MS.gene89534:CDS |
| ATGGTGACACCTCTTGGTTG+TGG | 0.599365 | 1.1:-51055431 | MS.gene89534:CDS |
| ATTGTATGTAGGTTTGGGCA+TGG | 0.609629 | 1.1:-51055450 | MS.gene89534:intron |
| CAACCTCCTAGTGATGGGAG+AGG | 0.613052 | 1.1:-51052604 | MS.gene89534:CDS |
| AGGAACATCGATCCGTGACA+AGG | 0.617850 | 1.1:-51054485 | MS.gene89534:CDS |
| ACCACGGATATTGATAAACA+TGG | 0.621168 | 1.1:-51054031 | MS.gene89534:CDS |
| GCGTGGCGGAACATCGCGAA+GGG | 0.625508 | 1.1:-51055627 | MS.gene89534:CDS |
| TGCGTGGCGGAACATCGCGA+AGG | 0.630823 | 1.1:-51055628 | MS.gene89534:CDS |
| ACTAATTAATGGAAAATGTG+GGG | 0.632550 | 1.1:-51055387 | MS.gene89534:CDS |
| AATGAGAATGATTCAATTTG+GGG | 0.633075 | 1.1:-51053320 | MS.gene89534:CDS |
| ACCCATATTTCATGCTAACG+TGG | 0.635539 | 1.1:+51054001 | None:intergenic |
| TCACCAGGGTTAGTTCCAGT+GGG | 0.639371 | 1.1:+51055263 | None:intergenic |
| ATATGCTATAAACCTTGTCA+CGG | 0.641292 | 1.1:+51054473 | None:intergenic |
| TTTAGCCTTCTCATCCACCA+AGG | 0.647399 | 1.1:-51050820 | MS.gene89534:intron |
| TTGTTTGTGATGGCAATGCG+TGG | 0.649163 | 1.1:-51055644 | None:intergenic |
| GCACCTCTCCCATCACTAGG+AGG | 0.650311 | 1.1:+51052601 | None:intergenic |
| GCCATGTTTATCAATATCCG+TGG | 0.652979 | 1.1:+51054030 | None:intergenic |
| GCAGGAACACAAGGAAAGAA+CGG | 0.661590 | 1.1:-51054397 | MS.gene89534:intron |
| CAACAGCTCCAGCAGCACCA+AGG | 0.665891 | 1.1:+51050575 | None:intergenic |
| ACTCTTCGGGAAGAAACAAG+AGG | 0.666135 | 1.1:+51055554 | None:intergenic |
| TTTCGTGGTTGAATTCACCA+GGG | 0.690900 | 1.1:+51055249 | None:intergenic |
| TTTGTGATGGCAATGCGTGG+CGG | 0.692252 | 1.1:-51055641 | None:intergenic |
| TTATGGACTCCACAACCAAG+AGG | 0.692764 | 1.1:+51055422 | None:intergenic |
| CAAGCCCACAAGAAGCATCG+CGG | 0.701523 | 1.1:-51053096 | MS.gene89534:CDS |
| CTTCGGGAAGAAACAAGAGG+AGG | 0.712604 | 1.1:+51055557 | None:intergenic |
| GCAGATGTTATGGTGACTGG+AGG | 0.730564 | 1.1:-51053295 | MS.gene89534:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATTCTATTTAAATTAAA+AGG | - | chr1.1:51051180-51051199 | MS.gene89534:intron | 10.0% |
| !!! | TTTTTCTCTTAAATTTTTAA+TGG | + | chr1.1:51055191-51055210 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAACTTGAATG+AGG | + | chr1.1:51051701-51051720 | None:intergenic | 15.0% |
| !! | AAAATTATATCTGAAAAACA+GGG | - | chr1.1:51052367-51052386 | MS.gene89534:intron | 15.0% |
| !! | ATTTAAGAGAAAAATTTGAA+TGG | - | chr1.1:51055197-51055216 | MS.gene89534:intron | 15.0% |
| !! | TTAAAAAATGGTTGTAATAT+AGG | - | chr1.1:51050882-51050901 | MS.gene89534:CDS | 15.0% |
| !! | TTTAAGAGAAAAATTTGAAT+GGG | - | chr1.1:51055198-51055217 | MS.gene89534:intron | 15.0% |
| !!! | GACAGTTATTTTTTAAAAAA+TGG | - | chr1.1:51050870-51050889 | MS.gene89534:CDS | 15.0% |
| !!! | TACATTTCTTGTTTAAATTA+CGG | + | chr1.1:51054610-51054629 | None:intergenic | 15.0% |
| !!! | TACTTTTCATTTTGAAATTA+CGG | - | chr1.1:51054484-51054503 | MS.gene89534:CDS | 15.0% |
| !!! | TTATAAGTTTTTAACTCAAA+TGG | - | chr1.1:51052322-51052341 | MS.gene89534:intron | 15.0% |
| !!! | TTTAACTTCAAAATTAATCA+GGG | - | chr1.1:51051558-51051577 | MS.gene89534:intron | 15.0% |
| !!! | TTTTAACTTCAAAATTAATC+AGG | - | chr1.1:51051557-51051576 | MS.gene89534:intron | 15.0% |
| !! | AAAAACTACTTTCGATTTAT+TGG | - | chr1.1:51051901-51051920 | MS.gene89534:intron | 20.0% |
| !! | AACTAATTAATGGAAAATGT+GGG | - | chr1.1:51050483-51050502 | MS.gene89534:intron | 20.0% |
| !! | AAGTATAAAGAAAACAAAGT+TGG | - | chr1.1:51051259-51051278 | MS.gene89534:intron | 20.0% |
| !! | AATATTCAAACTTAAATTGC+TGG | + | chr1.1:51054894-51054913 | None:intergenic | 20.0% |
| !! | ACAAAGACAAATAACTAATA+AGG | + | chr1.1:51052691-51052710 | None:intergenic | 20.0% |
| !! | ACTTATTATGTATGAATAAG+TGG | - | chr1.1:51053396-51053415 | MS.gene89534:intron | 20.0% |
| !! | AGTGACAATTAAAGTTAAAA+AGG | + | chr1.1:51054157-51054176 | None:intergenic | 20.0% |
| !! | CATTAACTCTTAATTTAACA+AGG | - | chr1.1:51055497-51055516 | MS.gene89534:intron | 20.0% |
| !! | CTTATTATGTATGAATAAGT+GGG | - | chr1.1:51053397-51053416 | MS.gene89534:intron | 20.0% |
| !! | CTTGTTAAATTAAGAGTTAA+TGG | + | chr1.1:51055499-51055518 | None:intergenic | 20.0% |
| !! | GAAAATTATATCTGAAAAAC+AGG | - | chr1.1:51052366-51052385 | MS.gene89534:intron | 20.0% |
| !! | GGAAATGAATAAACAAAAAA+AGG | + | chr1.1:51053064-51053083 | None:intergenic | 20.0% |
| !! | TCCAACAAAAAAAAAACTTT+GGG | + | chr1.1:51053519-51053538 | None:intergenic | 20.0% |
| !! | TGAACATTAAGCAAAATAAA+TGG | + | chr1.1:51052873-51052892 | None:intergenic | 20.0% |
| !! | TGATACTTAAAAACTGATAT+TGG | - | chr1.1:51052716-51052735 | MS.gene89534:intron | 20.0% |
| !! | TTAACTTCAAAATTAATCAG+GGG | - | chr1.1:51051559-51051578 | MS.gene89534:intron | 20.0% |
| !! | TTAAGAGAAAAATTTGAATG+GGG | - | chr1.1:51055199-51055218 | MS.gene89534:intron | 20.0% |
| !! | TTCCAACAAAAAAAAAACTT+TGG | + | chr1.1:51053520-51053539 | None:intergenic | 20.0% |
| !! | TTTGATATCATTAACACTTA+GGG | + | chr1.1:51054677-51054696 | None:intergenic | 20.0% |
| !!! | ATATGAAGTATTTGACATAT+TGG | - | chr1.1:51051149-51051168 | MS.gene89534:intron | 20.0% |
| !!! | ATTCAAACTGTTTTCATATA+AGG | - | chr1.1:51050794-51050813 | MS.gene89534:intron | 20.0% |
| !!! | GTGTTATTATAAGTTTCTTT+TGG | - | chr1.1:51051286-51051305 | MS.gene89534:intron | 20.0% |
| !!! | TAATTTTTTCTGATTGGATA+TGG | + | chr1.1:51052186-51052205 | None:intergenic | 20.0% |
| !!! | TTTATAACTCTAAAACCTTT+GGG | + | chr1.1:51053676-51053695 | None:intergenic | 20.0% |
| !!! | TTTTATAACTCTAAAACCTT+TGG | + | chr1.1:51053677-51053696 | None:intergenic | 20.0% |
| !!! | TTTTGGCATATATTATTTCA+GGG | - | chr1.1:51054384-51054403 | MS.gene89534:intron | 20.0% |
| !!! | TTTTTATATTCAAGTGCTTT+TGG | - | chr1.1:51054367-51054386 | MS.gene89534:intron | 20.0% |
| ! | AAATTATATGCTCATCTGTT+TGG | - | chr1.1:51055103-51055122 | MS.gene89534:intron | 25.0% |
| ! | AAGACAAATAACTAATAAGG+TGG | + | chr1.1:51052688-51052707 | None:intergenic | 25.0% |
| ! | AAGCTCTTAAAGATTCTAAT+TGG | - | chr1.1:51051440-51051459 | MS.gene89534:intron | 25.0% |
| ! | AATAAAATCTCATGTATTCG+TGG | - | chr1.1:51050390-51050409 | MS.gene89534:intron | 25.0% |
| ! | AATATCCGTGGTATAAAAAA+TGG | + | chr1.1:51051832-51051851 | None:intergenic | 25.0% |
| ! | AATGAGAATGATTCAATTTG+GGG | - | chr1.1:51052551-51052570 | MS.gene89534:intron | 25.0% |
| ! | ACTAATTAATGGAAAATGTG+GGG | - | chr1.1:51050484-51050503 | MS.gene89534:intron | 25.0% |
| ! | ACTATTAGATTAAGCATACA+GGG | + | chr1.1:51055440-51055459 | None:intergenic | 25.0% |
| ! | ATAGATTAAGCACAAATTCA+CGG | + | chr1.1:51055410-51055429 | None:intergenic | 25.0% |
| ! | ATATCTGCATAAGTTAGTAA+AGG | + | chr1.1:51051992-51052011 | None:intergenic | 25.0% |
| ! | CAACTAATTAATGGAAAATG+TGG | - | chr1.1:51050482-51050501 | MS.gene89534:intron | 25.0% |
| ! | CAATAAGCATAATAGTTGTT+CGG | + | chr1.1:51051332-51051351 | None:intergenic | 25.0% |
| ! | CAATGAGAATGATTCAATTT+GGG | - | chr1.1:51052550-51052569 | MS.gene89534:intron | 25.0% |
| ! | GAAAACACAACAATACAATA+TGG | + | chr1.1:51054708-51054727 | None:intergenic | 25.0% |
| ! | GATAATAAGAGAAATAGAAC+AGG | + | chr1.1:51054100-51054119 | None:intergenic | 25.0% |
| ! | GTTTGATATCATTAACACTT+AGG | + | chr1.1:51054678-51054697 | None:intergenic | 25.0% |
| ! | TAACAAATACAAAGCAACAT+AGG | + | chr1.1:51053340-51053359 | None:intergenic | 25.0% |
| ! | TAACTTCAAAATTAATCAGG+GGG | - | chr1.1:51051560-51051579 | MS.gene89534:intron | 25.0% |
| ! | TATTCATTTCCCTATTGTTT+AGG | - | chr1.1:51053073-51053092 | MS.gene89534:CDS | 25.0% |
| ! | TCCTGAGTAAAAACATAAAT+TGG | + | chr1.1:51052941-51052960 | None:intergenic | 25.0% |
| ! | TCTTTAGATATATAGAATGC+AGG | - | chr1.1:51052035-51052054 | MS.gene89534:intron | 25.0% |
| ! | TGAAGTTAAAATACAATGCA+AGG | + | chr1.1:51051548-51051567 | None:intergenic | 25.0% |
| ! | TGAATGAAATTATCATGTGA+AGG | - | chr1.1:51054342-51054361 | MS.gene89534:intron | 25.0% |
| ! | TTATGAATGCATAATTTGAG+AGG | + | chr1.1:51050370-51050389 | None:intergenic | 25.0% |
| ! | TTTGAATTGTATGTAGGTTT+GGG | - | chr1.1:51050416-51050435 | MS.gene89534:intron | 25.0% |
| !! | AAAAAAAAAACTTTGGGAGA+GGG | + | chr1.1:51053513-51053532 | None:intergenic | 25.0% |
| !! | ACGGTATGCAAATTTTTATA+TGG | - | chr1.1:51051493-51051512 | MS.gene89534:intron | 25.0% |
| !! | CACATTTTCCATTAATTAGT+TGG | + | chr1.1:51050484-51050503 | None:intergenic | 25.0% |
| !! | CTTTTGGCATATATTATTTC+AGG | - | chr1.1:51054383-51054402 | MS.gene89534:intron | 25.0% |
| !! | GTAATATGTTTGTTAGTAGT+TGG | + | chr1.1:51054130-51054149 | None:intergenic | 25.0% |
| !! | TGAGTTATATTTTGTACTCA+AGG | + | chr1.1:51052757-51052776 | None:intergenic | 25.0% |
| !! | TTTTGAATTGTATGTAGGTT+TGG | - | chr1.1:51050415-51050434 | MS.gene89534:intron | 25.0% |
| !!! | AATTGATAATGCATCAATAC+TGG | + | chr1.1:51052610-51052629 | None:intergenic | 25.0% |
| !!! | ATCAGTTTTTAAGTATCAGA+GGG | + | chr1.1:51052714-51052733 | None:intergenic | 25.0% |
| !!! | ATTTCATATGGATTTTGACT+AGG | - | chr1.1:51053225-51053244 | MS.gene89534:intron | 25.0% |
| !!! | CCATTCTAGTTTTGTTATTA+GGG | - | chr1.1:51053925-51053944 | MS.gene89534:intron | 25.0% |
| !!! | GGTAAGTTAAATTTTTTGTG+TGG | - | chr1.1:51052992-51053011 | MS.gene89534:intron | 25.0% |
| !!! | TATCAGTTTTTAAGTATCAG+AGG | + | chr1.1:51052715-51052734 | None:intergenic | 25.0% |
| !!! | TCCAATTTATGTTTTTACTC+AGG | - | chr1.1:51052937-51052956 | MS.gene89534:intron | 25.0% |
| !!! | TCCCAAAGTTTTTTTTTTGT+TGG | - | chr1.1:51053515-51053534 | MS.gene89534:intron | 25.0% |
| !!! | TTAGTCCATTTTTTATACCA+CGG | - | chr1.1:51051824-51051843 | MS.gene89534:intron | 25.0% |
| !!! | TTTATGTTTTTACTCAGGAT+AGG | - | chr1.1:51052942-51052961 | MS.gene89534:intron | 25.0% |
| !!! | TTTCATATGGATTTTGACTA+GGG | - | chr1.1:51053226-51053245 | MS.gene89534:intron | 25.0% |
| !!! | TTTGCTTAATGTTCACTTTT+TGG | - | chr1.1:51052878-51052897 | MS.gene89534:intron | 25.0% |
| !!! | TTTTAAAAGAGTAAGAAGCA+TGG | + | chr1.1:51052151-51052170 | None:intergenic | 25.0% |
| AAAAACTGATATTGGAATGC+AGG | - | chr1.1:51052724-51052743 | MS.gene89534:intron | 30.0% | |
| AAGGTCAGATTATAAACAGA+AGG | + | chr1.1:51053045-51053064 | None:intergenic | 30.0% | |
| AATGGTTGCAATTTAGAGAT+TGG | - | chr1.1:51052340-51052359 | MS.gene89534:intron | 30.0% | |
| ACATTGATGGAAAAGACAAA+GGG | + | chr1.1:51053714-51053733 | None:intergenic | 30.0% | |
| ACCTATTCAGAAGAAACTAA+GGG | - | chr1.1:51054417-51054436 | MS.gene89534:CDS | 30.0% | |
| ACTATATAAGCTTGGCTATT+TGG | - | chr1.1:51053744-51053763 | MS.gene89534:intron | 30.0% | |
| ACTCTTCACAAAAGAACTAT+TGG | - | chr1.1:51053831-51053850 | MS.gene89534:intron | 30.0% | |
| ACTTGGAACCAACTAATTAA+TGG | - | chr1.1:51050473-51050492 | MS.gene89534:intron | 30.0% | |
| ATAATTATATCCGAAGTGAC+AGG | + | chr1.1:51052245-51052264 | None:intergenic | 30.0% | |
| ATATAGGCTTACATGACAAT+AGG | - | chr1.1:51050898-51050917 | MS.gene89534:intron | 30.0% | |
| ATATGCTATAAACCTTGTCA+CGG | + | chr1.1:51051401-51051420 | None:intergenic | 30.0% | |
| ATATTGATAAACATGGCATC+AGG | - | chr1.1:51051847-51051866 | MS.gene89534:intron | 30.0% | |
| ATCACCTGTATAAAGAATTC+TGG | + | chr1.1:51054975-51054994 | None:intergenic | 30.0% | |
| ATGTTTGAATACTACAACAG+TGG | - | chr1.1:51054918-51054937 | MS.gene89534:intron | 30.0% | |
| ATTATAAACAGAAGGAGAAC+AGG | + | chr1.1:51053037-51053056 | None:intergenic | 30.0% | |
| ATTATGTATGAATAAGTGGG+AGG | - | chr1.1:51053400-51053419 | MS.gene89534:intron | 30.0% | |
| ATTGATGCATTATCAATTGC+AGG | - | chr1.1:51052612-51052631 | MS.gene89534:CDS | 30.0% | |
| CAAATAACTAATAAGGTGGT+TGG | + | chr1.1:51052684-51052703 | None:intergenic | 30.0% | |
| CACTATTAGATTAAGCATAC+AGG | + | chr1.1:51055441-51055460 | None:intergenic | 30.0% | |
| CCAATAAATAGAGAATGAGA+GGG | + | chr1.1:51054074-51054093 | None:intergenic | 30.0% | |
| CCCTAATAACAAAACTAGAA+TGG | + | chr1.1:51053928-51053947 | None:intergenic | 30.0% | |
| CCTGACTGAAATATATGAAA+AGG | + | chr1.1:51054785-51054804 | None:intergenic | 30.0% | |
| CGAACAACTATTATGCTTAT+TGG | - | chr1.1:51051330-51051349 | MS.gene89534:intron | 30.0% | |
| CGATAAACGTCTTAATTAAG+TGG | - | chr1.1:51050726-51050745 | MS.gene89534:intron | 30.0% | |
| CTAACCAATCTCTTAAAACA+TGG | + | chr1.1:51052273-51052292 | None:intergenic | 30.0% | |
| CTTCAAATTATTGCTCTGTT+TGG | - | chr1.1:51052901-51052920 | MS.gene89534:CDS | 30.0% | |
| GAAATGTCACAATACTACAA+TGG | + | chr1.1:51051362-51051381 | None:intergenic | 30.0% | |
| GATGTCAGGTAATTTATTGT+AGG | - | chr1.1:51053154-51053173 | MS.gene89534:intron | 30.0% | |
| GCAATGAGAATGATTCAATT+TGG | - | chr1.1:51052549-51052568 | MS.gene89534:intron | 30.0% | |
| GTATGCTTAATCTAATAGTG+CGG | - | chr1.1:51055441-51055460 | MS.gene89534:CDS | 30.0% | |
| GTGAAATTATGGAACAGTTA+TGG | + | chr1.1:51055250-51055269 | None:intergenic | 30.0% | |
| TAAGTTAGTAAAGGACAATG+TGG | + | chr1.1:51051983-51052002 | None:intergenic | 30.0% | |
| TACCTATTCAGAAGAAACTA+AGG | - | chr1.1:51054416-51054435 | MS.gene89534:CDS | 30.0% | |
| TAGAATTAAGCCAAATTTCG+TGG | + | chr1.1:51050640-51050659 | None:intergenic | 30.0% | |
| TATAGGCTTACATGACAATA+GGG | - | chr1.1:51050899-51050918 | MS.gene89534:intron | 30.0% | |
| TTCACAAAAGAACTATTGGT+TGG | - | chr1.1:51053835-51053854 | MS.gene89534:intron | 30.0% | |
| TTCTAAATCAGTTTCACACA+AGG | + | chr1.1:51052111-51052130 | None:intergenic | 30.0% | |
| TTGATGTAATCTACATCAGA+AGG | + | chr1.1:51054815-51054834 | None:intergenic | 30.0% | |
| TTTGACATAGCTACTCTAAT+TGG | + | chr1.1:51055577-51055596 | None:intergenic | 30.0% | |
| ! | AAGCTTTATCTGATATGCTT+CGG | + | chr1.1:51050286-51050305 | None:intergenic | 30.0% |
| ! | AATAAGCTAAAACCAGCTTT+TGG | - | chr1.1:51050986-51051005 | MS.gene89534:intron | 30.0% |
| ! | AATAGTTCTTTTGTGAAGAG+TGG | + | chr1.1:51053832-51053851 | None:intergenic | 30.0% |
| ! | AGAATCTTTAAGAGCTTCAT+TGG | + | chr1.1:51051437-51051456 | None:intergenic | 30.0% |
| ! | CAAAAAAAAAACTTTGGGAG+AGG | + | chr1.1:51053514-51053533 | None:intergenic | 30.0% |
| ! | CAGATGAGCATATAATTTGT+TGG | + | chr1.1:51055101-51055120 | None:intergenic | 30.0% |
| ! | CCTTTTCATATATTTCAGTC+AGG | - | chr1.1:51054782-51054801 | MS.gene89534:intron | 30.0% |
| ! | CGAAATTTGGCTTAATTCTA+AGG | - | chr1.1:51050640-51050659 | MS.gene89534:intron | 30.0% |
| ! | GTATAGAGAAAAGTGTAAAC+TGG | - | chr1.1:51050816-51050835 | MS.gene89534:intron | 30.0% |
| ! | GTGGTTGATTTCATTTCATA+TGG | - | chr1.1:51053213-51053232 | MS.gene89534:intron | 30.0% |
| ! | TATTAAACTGGTTGTTGTTG+TGG | - | chr1.1:51052390-51052409 | MS.gene89534:intron | 30.0% |
| ! | TATTCTCCTCTAAGAACTTA+TGG | + | chr1.1:51051132-51051151 | None:intergenic | 30.0% |
| ! | TGAAAAACAGGGTATTAAAC+TGG | - | chr1.1:51052378-51052397 | MS.gene89534:intron | 30.0% |
| ! | TGGCTTTTTGAATTGTATGT+AGG | - | chr1.1:51050410-51050429 | MS.gene89534:intron | 30.0% |
| !! | ATAATTTCACTGATTTCAGG+GGG | - | chr1.1:51055260-51055279 | MS.gene89534:CDS | 30.0% |
| !! | CATAATTTCACTGATTTCAG+GGG | - | chr1.1:51055259-51055278 | MS.gene89534:CDS | 30.0% |
| !! | CCATAATTTCACTGATTTCA+GGG | - | chr1.1:51055258-51055277 | MS.gene89534:CDS | 30.0% |
| !! | GTGGTATAAAAAATGGACTA+AGG | + | chr1.1:51051825-51051844 | None:intergenic | 30.0% |
| !! | TCCATAATTTCACTGATTTC+AGG | - | chr1.1:51055257-51055276 | MS.gene89534:CDS | 30.0% |
| !! | TTAGTTGGTTCCAAGTTTTA+TGG | + | chr1.1:51050469-51050488 | None:intergenic | 30.0% |
| !!! | ATCGAAAGTAGTTTTTTACC+TGG | + | chr1.1:51051897-51051916 | None:intergenic | 30.0% |
| !!! | ATGTCAAACTCTTTTGGTTT+TGG | - | chr1.1:51055589-51055608 | MS.gene89534:CDS | 30.0% |
| !!! | GCCATTCTAGTTTTGTTATT+AGG | - | chr1.1:51053924-51053943 | MS.gene89534:intron | 30.0% |
| !!! | TCAACCATGTTTTAAGAGAT+TGG | - | chr1.1:51052266-51052285 | MS.gene89534:intron | 30.0% |
| !!! | TTCATATGGATTTTGACTAG+GGG | - | chr1.1:51053227-51053246 | MS.gene89534:intron | 30.0% |
| AAAATCTATGGAGAGATTCG+TGG | - | chr1.1:51053125-51053144 | MS.gene89534:CDS | 35.0% | |
| AAGCTATGCTAGAGAACTTA+CGG | - | chr1.1:51050962-51050981 | MS.gene89534:intron | 35.0% | |
| AATGAGAGCTTTCATCTAAG+AGG | + | chr1.1:51055152-51055171 | None:intergenic | 35.0% | |
| ACCACAAATAAAGCTAAGAC+TGG | + | chr1.1:51053198-51053217 | None:intergenic | 35.0% | |
| ACCACGGATATTGATAAACA+TGG | - | chr1.1:51051840-51051859 | MS.gene89534:intron | 35.0% | |
| ACCCTTAGTTTCTTCTGAAT+AGG | + | chr1.1:51054421-51054440 | None:intergenic | 35.0% | |
| ACTCAAGTCCAAATTCTAAG+AGG | - | chr1.1:51053463-51053482 | MS.gene89534:intron | 35.0% | |
| AGATGAAAGCTCTCATTCAT+GGG | - | chr1.1:51055155-51055174 | MS.gene89534:intron | 35.0% | |
| AGTATTGTGACATTTCCCTT+AGG | - | chr1.1:51051366-51051385 | MS.gene89534:intron | 35.0% | |
| ATCCAGAGTAAGCAAAAAGT+AGG | + | chr1.1:51055630-51055649 | None:intergenic | 35.0% | |
| ATCTGATATGCTTCGGTAAA+TGG | + | chr1.1:51050279-51050298 | None:intergenic | 35.0% | |
| ATGAGAGCTTTCATCTAAGA+GGG | + | chr1.1:51055151-51055170 | None:intergenic | 35.0% | |
| ATGCATAATTTGAGAGGAGA+TGG | + | chr1.1:51050364-51050383 | None:intergenic | 35.0% | |
| ATTAACACTTAGGGTGTGTT+TGG | + | chr1.1:51054668-51054687 | None:intergenic | 35.0% | |
| ATTGATGGAAAAGACAAAGG+GGG | + | chr1.1:51053712-51053731 | None:intergenic | 35.0% | |
| CACAAATAAAGCTAAGACTG+GGG | + | chr1.1:51053196-51053215 | None:intergenic | 35.0% | |
| CATTGATGGAAAAGACAAAG+GGG | + | chr1.1:51053713-51053732 | None:intergenic | 35.0% | |
| CCACAAATAAAGCTAAGACT+GGG | + | chr1.1:51053197-51053216 | None:intergenic | 35.0% | |
| CCCTCTCATTCTCTATTTAT+TGG | - | chr1.1:51054071-51054090 | MS.gene89534:intron | 35.0% | |
| CCCTGAAATCAGTGAAATTA+TGG | + | chr1.1:51055261-51055280 | None:intergenic | 35.0% | |
| CTCACCAGAATTCTTTATAC+AGG | - | chr1.1:51054968-51054987 | MS.gene89534:intron | 35.0% | |
| GACATTGATGGAAAAGACAA+AGG | + | chr1.1:51053715-51053734 | None:intergenic | 35.0% | |
| GCCAATAAATAGAGAATGAG+AGG | + | chr1.1:51054075-51054094 | None:intergenic | 35.0% | |
| GCTCAAGTTCCTAAACAATA+GGG | + | chr1.1:51053085-51053104 | None:intergenic | 35.0% | |
| GGAAGTCAATTGATCAAATG+TGG | + | chr1.1:51050570-51050589 | None:intergenic | 35.0% | |
| GTGAATTCAACCACGAAATT+TGG | - | chr1.1:51050627-51050646 | MS.gene89534:intron | 35.0% | |
| TAATGCATCAATACTGGACT+CGG | + | chr1.1:51052604-51052623 | None:intergenic | 35.0% | |
| TAATGGAAAATGTGGGGTAA+GGG | - | chr1.1:51050490-51050509 | MS.gene89534:intron | 35.0% | |
| TAGATGAAAGCTCTCATTCA+TGG | - | chr1.1:51055154-51055173 | MS.gene89534:intron | 35.0% | |
| TAGCATAGCTTATGAAGAGA+CGG | + | chr1.1:51050953-51050972 | None:intergenic | 35.0% | |
| TATGCCAAAGTTAGAGTTGA+GGG | + | chr1.1:51053566-51053585 | None:intergenic | 35.0% | |
| TCAAAACGTTGCTTACATGT+CGG | + | chr1.1:51055347-51055366 | None:intergenic | 35.0% | |
| TCCAGAGTAAGCAAAAAGTA+GGG | + | chr1.1:51055629-51055648 | None:intergenic | 35.0% | |
| TGCTAATATCTAACCAGTAC+TGG | + | chr1.1:51054237-51054256 | None:intergenic | 35.0% | |
| TGCTCAACTGATATGTGAAA+AGG | - | chr1.1:51051629-51051648 | MS.gene89534:intron | 35.0% | |
| TGCTCAAGTTCCTAAACAAT+AGG | + | chr1.1:51053086-51053105 | None:intergenic | 35.0% | |
| TGGCACTAACATAAAACACA+AGG | + | chr1.1:51052664-51052683 | None:intergenic | 35.0% | |
| TTAATGGAAAATGTGGGGTA+AGG | - | chr1.1:51050489-51050508 | MS.gene89534:intron | 35.0% | |
| TTATGCCAAAGTTAGAGTTG+AGG | + | chr1.1:51053567-51053586 | None:intergenic | 35.0% | |
| TTGTCACCAAATACAGAATC+TGG | + | chr1.1:51055523-51055542 | None:intergenic | 35.0% | |
| TTTCCCTATTCCTGAATACA+GGG | - | chr1.1:51052471-51052490 | MS.gene89534:intron | 35.0% | |
| TTTGTTAGTAGTTGGAAGCT+GGG | + | chr1.1:51054122-51054141 | None:intergenic | 35.0% | |
| ! | AAGAGATTGGTTAGTCAATC+AGG | - | chr1.1:51052279-51052298 | MS.gene89534:intron | 35.0% |
| ! | ACGAATCTCTCCATAGATTT+TGG | + | chr1.1:51053126-51053145 | None:intergenic | 35.0% |
| ! | ACTTTTTGCTTACTCTGGAT+CGG | - | chr1.1:51055630-51055649 | MS.gene89534:CDS | 35.0% |
| ! | AGATTGCTTTCTTTCAAGTC+AGG | + | chr1.1:51051223-51051242 | None:intergenic | 35.0% |
| ! | CTTTTGATGTTCTTATCCCA+GGG | - | chr1.1:51055466-51055485 | MS.gene89534:intron | 35.0% |
| ! | GAGCTCTATCTTATTTCAAG+AGG | + | chr1.1:51052213-51052232 | None:intergenic | 35.0% |
| ! | GTAGCTATGTCAAACTCTTT+TGG | - | chr1.1:51055583-51055602 | MS.gene89534:CDS | 35.0% |
| ! | TCTTTTGATGTTCTTATCCC+AGG | - | chr1.1:51055465-51055484 | MS.gene89534:intron | 35.0% |
| ! | TTTTCCCTATTCCTGAATAC+AGG | - | chr1.1:51052470-51052489 | MS.gene89534:intron | 35.0% |
| ! | TTTTTACTCAGGATAGGTGA+AGG | - | chr1.1:51052948-51052967 | MS.gene89534:intron | 35.0% |
| !!! | GGTCGCTAATTTTTTCTGAT+TGG | + | chr1.1:51052192-51052211 | None:intergenic | 35.0% |
| !!! | TCAAACTCTTTTGGTTTTGG+AGG | - | chr1.1:51055592-51055611 | MS.gene89534:CDS | 35.0% |
| AAAGCTCTCATTCATGGGAA+TGG | - | chr1.1:51055160-51055179 | MS.gene89534:intron | 40.0% | |
| AACAGAAGGAGAACAGGAAT+TGG | + | chr1.1:51053031-51053050 | None:intergenic | 40.0% | |
| ACAAGGCCAGATTCTGTATT+TGG | - | chr1.1:51055514-51055533 | MS.gene89534:intron | 40.0% | |
| ACCCATATTTCATGCTAACG+TGG | + | chr1.1:51051873-51051892 | None:intergenic | 40.0% | |
| AGACCTCGATGCTTGAATAT+TGG | + | chr1.1:51053602-51053621 | None:intergenic | 40.0% | |
| AGTCAATCAGGACATATCTC+AGG | - | chr1.1:51052291-51052310 | MS.gene89534:intron | 40.0% | |
| AGTGGTAACCCAGAATTTCT+AGG | - | chr1.1:51053997-51054016 | MS.gene89534:CDS | 40.0% | |
| ATTACTCAACCTCCTAGTGA+TGG | - | chr1.1:51053261-51053280 | MS.gene89534:CDS | 40.0% | |
| ATTGGACATAGGGAGATTTG+CGG | + | chr1.1:51054025-51054044 | None:intergenic | 40.0% | |
| ATTGTATGTAGGTTTGGGCA+TGG | - | chr1.1:51050421-51050440 | MS.gene89534:intron | 40.0% | |
| ATTTCGTGGTTGAATTCACC+AGG | + | chr1.1:51050626-51050645 | None:intergenic | 40.0% | |
| ATTTGGGGATGCAGATGTTA+TGG | - | chr1.1:51052566-51052585 | MS.gene89534:intron | 40.0% | |
| CATGCTACATCTACACCTTT+AGG | - | chr1.1:51054839-51054858 | MS.gene89534:intron | 40.0% | |
| CCATTGCCATAAGTTCTTAG+AGG | - | chr1.1:51051123-51051142 | MS.gene89534:intron | 40.0% | |
| CTGTGGCTACTATATAAGCT+TGG | - | chr1.1:51053736-51053755 | MS.gene89534:intron | 40.0% | |
| CTTATGACATGTCCAAAAGC+TGG | + | chr1.1:51051001-51051020 | None:intergenic | 40.0% | |
| GCCACGTTAGCATGAAATAT+GGG | - | chr1.1:51051869-51051888 | MS.gene89534:intron | 40.0% | |
| GCCATGTTTATCAATATCCG+TGG | + | chr1.1:51051844-51051863 | None:intergenic | 40.0% | |
| GTGGTAACCCAGAATTTCTA+GGG | - | chr1.1:51053998-51054017 | MS.gene89534:CDS | 40.0% | |
| GTTGTGGAGTCCATAAAACT+TGG | - | chr1.1:51050456-51050475 | MS.gene89534:intron | 40.0% | |
| TAGATTAAGCATACAGGGTC+TGG | + | chr1.1:51055435-51055454 | None:intergenic | 40.0% | |
| TAGCATGAAATATGGGTTCC+AGG | - | chr1.1:51051876-51051895 | MS.gene89534:intron | 40.0% | |
| TATGTGAAAAGGTCAGTTCG+TGG | - | chr1.1:51051640-51051659 | MS.gene89534:intron | 40.0% | |
| TGAGAGCTTTCATCTAAGAG+GGG | + | chr1.1:51055150-51055169 | None:intergenic | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr1.1:51054654-51054673 | None:intergenic | 40.0% | |
| TTAAATTGCTGGAATCCGTG+AGG | + | chr1.1:51054883-51054902 | None:intergenic | 40.0% | |
| TTACTCAACCTCCTAGTGAT+GGG | - | chr1.1:51053262-51053281 | MS.gene89534:CDS | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr1.1:51054660-51054679 | None:intergenic | 40.0% | |
| TTATATCCGAAGTGACAGGT+AGG | + | chr1.1:51052241-51052260 | None:intergenic | 40.0% | |
| TTCACCCTCAACTCTAACTT+TGG | - | chr1.1:51053559-51053578 | MS.gene89534:intron | 40.0% | |
| TTCCCTATTCCTGAATACAG+GGG | - | chr1.1:51052472-51052491 | MS.gene89534:intron | 40.0% | |
| TTTCGTGGTTGAATTCACCA+GGG | + | chr1.1:51050625-51050644 | None:intergenic | 40.0% | |
| TTTGGATGGAGGGTTTAGAA+GGG | - | chr1.1:51054444-51054463 | MS.gene89534:CDS | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | + | chr1.1:51054650-51054669 | None:intergenic | 40.0% | |
| ! | AAACTAAGGGTGTGTTTGGA+TGG | - | chr1.1:51054430-51054449 | MS.gene89534:CDS | 40.0% |
| ! | AGTTCTTTTGTGAAGAGTGG+TGG | + | chr1.1:51053829-51053848 | None:intergenic | 40.0% |
| ! | ATACTGTCATTTGAGTGAGC+TGG | + | chr1.1:51054051-51054070 | None:intergenic | 40.0% |
| ! | CCATGGTCTTAGAGTATGTT+TGG | + | chr1.1:51051093-51051112 | None:intergenic | 40.0% |
| ! | CCTCTAAGAACTTATGGCAA+TGG | + | chr1.1:51051126-51051145 | None:intergenic | 40.0% |
| ! | CTTTTCCATCAATGTCACTG+TGG | - | chr1.1:51053719-51053738 | MS.gene89534:intron | 40.0% |
| ! | GAAGAAACTAAGGGTGTGTT+TGG | - | chr1.1:51054426-51054445 | MS.gene89534:CDS | 40.0% |
| ! | GTTCTTTTGTGAAGAGTGGT+GGG | + | chr1.1:51053828-51053847 | None:intergenic | 40.0% |
| ! | GTTTGTTAGTAGTTGGAAGC+TGG | + | chr1.1:51054123-51054142 | None:intergenic | 40.0% |
| ! | TACTGGTTGTGGCAAAAGTA+TGG | + | chr1.1:51054220-51054239 | None:intergenic | 40.0% |
| ! | TGACCAATATTCAAGCATCG+AGG | - | chr1.1:51053596-51053615 | MS.gene89534:intron | 40.0% |
| !! | AATATTCAAGCATCGAGGTC+TGG | - | chr1.1:51053601-51053620 | MS.gene89534:intron | 40.0% |
| !! | ATCTCCTTTGAAGCAGTCAA+TGG | + | chr1.1:51055553-51055572 | None:intergenic | 40.0% |
| !! | ATTAATCAGGGGGTGTCTAT+TGG | - | chr1.1:51051570-51051589 | MS.gene89534:intron | 40.0% |
| !! | CATGACTCGTGCTTTAAAAC+AGG | - | chr1.1:51053302-51053321 | MS.gene89534:CDS | 40.0% |
| !! | CCAAACATACTCTAAGACCA+TGG | - | chr1.1:51051090-51051109 | MS.gene89534:intron | 40.0% |
| !! | CCCAGTCTTAGCTTTATTTG+TGG | - | chr1.1:51053194-51053213 | MS.gene89534:intron | 40.0% |
| !! | CTGATTCTGAAGTAGTTTGC+TGG | - | chr1.1:51051670-51051689 | MS.gene89534:intron | 40.0% |
| !! | TATCTAACCAGTACTGGTTG+TGG | + | chr1.1:51054231-51054250 | None:intergenic | 40.0% |
| !!! | CTGTTTTAAAGCACGAGTCA+TGG | + | chr1.1:51053304-51053323 | None:intergenic | 40.0% |
| !!! | TCCCTACTTTTTGCTTACTC+TGG | - | chr1.1:51055625-51055644 | MS.gene89534:CDS | 40.0% |
| AACCGAGGAGCCAAAATCTA+TGG | - | chr1.1:51053113-51053132 | MS.gene89534:CDS | 45.0% | |
| AACCGGTGACAACTACTCTT+CGG | + | chr1.1:51050334-51050353 | None:intergenic | 45.0% | |
| AACTAGCAGCTATAGCGTAG+TGG | - | chr1.1:51053870-51053889 | MS.gene89534:intron | 45.0% | |
| ACAACTGCTATGGCTGAAAC+TGG | + | chr1.1:51053968-51053987 | None:intergenic | 45.0% | |
| ACTCTTCGGGAAGAAACAAG+AGG | + | chr1.1:51050320-51050339 | None:intergenic | 45.0% | |
| AGGCTCGACCTCTTAGAATT+TGG | + | chr1.1:51053474-51053493 | None:intergenic | 45.0% | |
| AGTAGCCACAGTGACATTGA+TGG | + | chr1.1:51053727-51053746 | None:intergenic | 45.0% | |
| AGTTAATGGAGCGATTCCCT+GGG | + | chr1.1:51055485-51055504 | None:intergenic | 45.0% | |
| ATCTACTAGCATAGTCCCCT+AGG | + | chr1.1:51051052-51051071 | None:intergenic | 45.0% | |
| ATGGAGAGATTCGTGGCTAT+GGG | - | chr1.1:51053132-51053151 | MS.gene89534:intron | 45.0% | |
| CAATCAGGACATATCTCAGG+TGG | - | chr1.1:51052294-51052313 | MS.gene89534:intron | 45.0% | |
| CCATCTCGACCACTATCAAA+GGG | + | chr1.1:51052801-51052820 | None:intergenic | 45.0% | |
| CTAAAGAAGACGAGCTAGCA+TGG | + | chr1.1:51055036-51055055 | None:intergenic | 45.0% | |
| CTCTCTCAAGTAGTCTCCTA+GGG | - | chr1.1:51051033-51051052 | MS.gene89534:CDS | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | + | chr1.1:51054661-51054680 | None:intergenic | 45.0% | |
| CTTGAGCATGCTAAAAACCG+AGG | - | chr1.1:51053098-51053117 | MS.gene89534:CDS | 45.0% | |
| GAAGGAGAACAGGAATTGGA+AGG | + | chr1.1:51053027-51053046 | None:intergenic | 45.0% | |
| GAGAGCTTTCATCTAAGAGG+GGG | + | chr1.1:51055149-51055168 | None:intergenic | 45.0% | |
| GAGGAGATGGAGTTACTAAC+CGG | + | chr1.1:51050351-51050370 | None:intergenic | 45.0% | |
| GATCTGCTTCACTTGCCTAA+AGG | + | chr1.1:51054857-51054876 | None:intergenic | 45.0% | |
| GATGCAGATGTTATGGTGAC+TGG | - | chr1.1:51052573-51052592 | MS.gene89534:CDS | 45.0% | |
| GCAGGAACACAAGGAAAGAA+CGG | - | chr1.1:51051474-51051493 | MS.gene89534:intron | 45.0% | |
| GCTACTGGGTCACATTCTAT+TGG | - | chr1.1:51052522-51052541 | MS.gene89534:intron | 45.0% | |
| GCTAGCATGGTCAGAGAATA+TGG | + | chr1.1:51055023-51055042 | None:intergenic | 45.0% | |
| GGCCACGTTAGCATGAAATA+TGG | - | chr1.1:51051868-51051887 | MS.gene89534:intron | 45.0% | |
| GTTTGGATGGAGGGTTTAGA+AGG | - | chr1.1:51054443-51054462 | MS.gene89534:CDS | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | + | chr1.1:51054651-51054670 | None:intergenic | 45.0% | |
| TAAGCTTGGCTATTTGGCGA+TGG | - | chr1.1:51053750-51053769 | MS.gene89534:intron | 45.0% | |
| TAATGAGCTCCTGTAGTTGC+TGG | - | chr1.1:51051949-51051968 | MS.gene89534:intron | 45.0% | |
| TACTGCCACTACAACTGCTA+TGG | + | chr1.1:51053978-51053997 | None:intergenic | 45.0% | |
| TATGGAGAGATTCGTGGCTA+TGG | - | chr1.1:51053131-51053150 | MS.gene89534:intron | 45.0% | |
| TCACGGATCGATGTTCCTAA+GGG | + | chr1.1:51051384-51051403 | None:intergenic | 45.0% | |
| TCCATCTCGACCACTATCAA+AGG | + | chr1.1:51052802-51052821 | None:intergenic | 45.0% | |
| TCTCTCAAGTAGTCTCCTAG+GGG | - | chr1.1:51051034-51051053 | MS.gene89534:CDS | 45.0% | |
| TGAGTCTAACTCAACCCCAA+AGG | + | chr1.1:51053448-51053467 | None:intergenic | 45.0% | |
| TGATGTCAAGTCGTCAACCA+GGG | + | chr1.1:51053653-51053672 | None:intergenic | 45.0% | |
| TTATGGACTCCACAACCAAG+AGG | + | chr1.1:51050452-51050471 | None:intergenic | 45.0% | |
| TTCAGCCATAGCAGTTGTAG+TGG | - | chr1.1:51053970-51053989 | MS.gene89534:intron | 45.0% | |
| TTGCGGACCCTAGAAATTCT+GGG | + | chr1.1:51054008-51054027 | None:intergenic | 45.0% | |
| TTGGATGGAGGGTTTAGAAG+GGG | - | chr1.1:51054445-51054464 | MS.gene89534:CDS | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | chr1.1:51054649-51054668 | None:intergenic | 45.0% | |
| TTTGCGGACCCTAGAAATTC+TGG | + | chr1.1:51054009-51054028 | None:intergenic | 45.0% | |
| ! | ACATTTTGTGTGCGAGTCAC+GGG | - | chr1.1:51055366-51055385 | MS.gene89534:CDS | 45.0% |
| ! | ACTTTTGCCACAACCAGTAC+TGG | - | chr1.1:51054221-51054240 | MS.gene89534:intron | 45.0% |
| ! | ATGATTTGGCCCCTGTATTC+AGG | + | chr1.1:51052484-51052503 | None:intergenic | 45.0% |
| ! | CATGCCATTGACTGCTTCAA+AGG | - | chr1.1:51055546-51055565 | MS.gene89534:CDS | 45.0% |
| ! | GACATTTTGTGTGCGAGTCA+CGG | - | chr1.1:51055365-51055384 | MS.gene89534:CDS | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr1.1:51054434-51054453 | MS.gene89534:CDS | 45.0% |
| ! | TAATTGGTTTCCCACTGAGC+AGG | - | chr1.1:51051456-51051475 | MS.gene89534:intron | 45.0% |
| ! | TCTTACCTTGGTGGATGAGA+AGG | + | chr1.1:51055059-51055078 | None:intergenic | 45.0% |
| ! | TTTAGCCTTCTCATCCACCA+AGG | - | chr1.1:51055051-51055070 | MS.gene89534:intron | 45.0% |
| !!! | CTCCATAGATTTTGGCTCCT+CGG | + | chr1.1:51053118-51053137 | None:intergenic | 45.0% |
| !!! | TTTTGTGAAGAGTGGTGGGT+GGG | + | chr1.1:51053824-51053843 | None:intergenic | 45.0% |
| ACCGGTGACAACTACTCTTC+GGG | + | chr1.1:51050333-51050352 | None:intergenic | 50.0% | |
| AGCAGTTGTAGTGGCAGTAG+TGG | - | chr1.1:51053979-51053998 | MS.gene89534:intron | 50.0% | |
| AGGAACATCGATCCGTGACA+AGG | - | chr1.1:51051386-51051405 | MS.gene89534:intron | 50.0% | |
| ATCCGAAGTGACAGGTAGGA+AGG | + | chr1.1:51052237-51052256 | None:intergenic | 50.0% | |
| ATGGAGGGTTTAGAAGGGGA+AGG | - | chr1.1:51054449-51054468 | MS.gene89534:CDS | 50.0% | |
| ATGGTGACACCTCTTGGTTG+TGG | - | chr1.1:51050440-51050459 | MS.gene89534:intron | 50.0% | |
| ATTCGTGGCTATGGGATGTC+AGG | - | chr1.1:51053140-51053159 | MS.gene89534:intron | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | + | chr1.1:51054645-51054664 | None:intergenic | 50.0% | |
| ATTGCTGGAATCCGTGAGGA+TGG | + | chr1.1:51054879-51054898 | None:intergenic | 50.0% | |
| ATTTGAGTGAGCTGGCGCAT+TGG | + | chr1.1:51054043-51054062 | None:intergenic | 50.0% | |
| CTCAGGATAGGTGAAGGTTC+TGG | - | chr1.1:51052954-51052973 | MS.gene89534:intron | 50.0% | |
| CTCATCCACCAAGGTAAGAG+TGG | - | chr1.1:51055060-51055079 | MS.gene89534:intron | 50.0% | |
| CTTCGGGAAGAAACAAGAGG+AGG | + | chr1.1:51050317-51050336 | None:intergenic | 50.0% | |
| GAAGAAACAAGAGGAGGAGG+TGG | + | chr1.1:51050311-51050330 | None:intergenic | 50.0% | |
| GACGACTTGACATCACCCAA+AGG | - | chr1.1:51053658-51053677 | MS.gene89534:intron | 50.0% | |
| GAGTTAATGGAGCGATTCCC+TGG | + | chr1.1:51055486-51055505 | None:intergenic | 50.0% | |
| GCAGATGTTATGGTGACTGG+AGG | - | chr1.1:51052576-51052595 | MS.gene89534:CDS | 50.0% | |
| GCAGTGACTGCAGCATGATT+TGG | + | chr1.1:51052498-51052517 | None:intergenic | 50.0% | |
| GCTCTCTCAAGTAGTCTCCT+AGG | - | chr1.1:51051032-51051051 | MS.gene89534:intron | 50.0% | |
| GCTTGCAACCACTCTTACCT+TGG | + | chr1.1:51055071-51055090 | None:intergenic | 50.0% | |
| GGAAAAGACAAAGGGGGAGA+TGG | + | chr1.1:51053706-51053725 | None:intergenic | 50.0% | |
| GGCCCCTGTATTCAGGAATA+GGG | + | chr1.1:51052477-51052496 | None:intergenic | 50.0% | |
| GTCACGGATCGATGTTCCTA+AGG | + | chr1.1:51051385-51051404 | None:intergenic | 50.0% | |
| GTGAAGCAGATCCATCCTCA+CGG | - | chr1.1:51054865-51054884 | MS.gene89534:intron | 50.0% | |
| GTGATGTCAAGTCGTCAACC+AGG | + | chr1.1:51053654-51053673 | None:intergenic | 50.0% | |
| TCCCGAAGAGTAGTTGTCAC+CGG | - | chr1.1:51050329-51050348 | MS.gene89534:CDS | 50.0% | |
| TCCTTGTGTTCCTGCTCAGT+GGG | + | chr1.1:51051469-51051488 | None:intergenic | 50.0% | |
| TGCAACCACTCTTACCTTGG+TGG | + | chr1.1:51055068-51055087 | None:intergenic | 50.0% | |
| TGGAGGGTTTAGAAGGGGAA+GGG | - | chr1.1:51054450-51054469 | MS.gene89534:CDS | 50.0% | |
| TGGCCCCTGTATTCAGGAAT+AGG | + | chr1.1:51052478-51052497 | None:intergenic | 50.0% | |
| TTCCTTGTGTTCCTGCTCAG+TGG | + | chr1.1:51051470-51051489 | None:intergenic | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | + | chr1.1:51054644-51054663 | None:intergenic | 50.0% | |
| ! | AACCCCAAAGGCTAGCTCAT+GGG | + | chr1.1:51053436-51053455 | None:intergenic | 50.0% |
| ! | CAGTCACTGCTTGTGCTACT+GGG | - | chr1.1:51052508-51052527 | MS.gene89534:intron | 50.0% |
| ! | CATTTTGTGTGCGAGTCACG+GGG | - | chr1.1:51055367-51055386 | MS.gene89534:CDS | 50.0% |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | - | chr1.1:51054433-51054452 | MS.gene89534:CDS | 50.0% |
| ! | CTCCTTCCTACCTGTCACTT+CGG | - | chr1.1:51052232-51052251 | MS.gene89534:intron | 50.0% |
| ! | GGAACATCGCGAAGGGTTTT+GGG | - | chr1.1:51050251-51050270 | MS.gene89534:CDS | 50.0% |
| !! | AATCAGGGGGTGTCTATTGG+TGG | - | chr1.1:51051573-51051592 | MS.gene89534:intron | 50.0% |
| !! | AGGTGAAGGTTCTGGAGTCT+TGG | - | chr1.1:51052962-51052981 | MS.gene89534:intron | 50.0% |
| !! | AGGTTCTGGAGTCTTGGTCT+TGG | - | chr1.1:51052968-51052987 | MS.gene89534:intron | 50.0% |
| !! | ATCAGGGGGTGTCTATTGGT+GGG | - | chr1.1:51051574-51051593 | MS.gene89534:intron | 50.0% |
| !! | ATTCAAGCATCGAGGTCTGG+CGG | - | chr1.1:51053604-51053623 | MS.gene89534:intron | 50.0% |
| !! | CACTGATTTCAGGGGGCTAT+TGG | - | chr1.1:51055267-51055286 | MS.gene89534:CDS | 50.0% |
| !! | CCCTTTGATAGTGGTCGAGA+TGG | - | chr1.1:51052798-51052817 | MS.gene89534:intron | 50.0% |
| !! | CTTTTGTGAAGAGTGGTGGG+TGG | + | chr1.1:51053825-51053844 | None:intergenic | 50.0% |
| !! | TCACCAGGGTTAGTTCCAGT+GGG | + | chr1.1:51050611-51050630 | None:intergenic | 50.0% |
| !! | TTCACCAGGGTTAGTTCCAG+TGG | + | chr1.1:51050612-51050631 | None:intergenic | 50.0% |
| !! | TTCTGGAGTCTTGGTCTTGG+AGG | - | chr1.1:51052971-51052990 | MS.gene89534:intron | 50.0% |
| AGCACGAGTCATGGCCAGAA+TGG | + | chr1.1:51053295-51053314 | None:intergenic | 55.0% | |
| AGCTCCTGTAGTTGCTGGAC+AGG | - | chr1.1:51051954-51051973 | MS.gene89534:intron | 55.0% | |
| AGGGCAAGAGCTAAGGCTTG+AGG | + | chr1.1:51053494-51053513 | None:intergenic | 55.0% | |
| AGGGTTTAGAAGGGGAAGGG+AGG | - | chr1.1:51054453-51054472 | MS.gene89534:CDS | 55.0% | |
| ATGGCACCTCTCCCATCACT+AGG | + | chr1.1:51053276-51053295 | None:intergenic | 55.0% | |
| CAATGGAAGCTTGTCCACCC+TGG | - | chr1.1:51053633-51053652 | MS.gene89534:intron | 55.0% | |
| CGACGAAGACGCTGCATACA+GGG | + | chr1.1:51051802-51051821 | None:intergenic | 55.0% | |
| CGCTGCATACAGGGGAGAAT+AGG | + | chr1.1:51051793-51051812 | None:intergenic | 55.0% | |
| CGGGAAGAAACAAGAGGAGG+AGG | + | chr1.1:51050314-51050333 | None:intergenic | 55.0% | |
| GACGAAGACGCTGCATACAG+GGG | + | chr1.1:51051801-51051820 | None:intergenic | 55.0% | |
| GAGCTGGCGCATTGGACATA+GGG | + | chr1.1:51054035-51054054 | None:intergenic | 55.0% | |
| GCAATGGCAGCTTTGCACCA+TGG | + | chr1.1:51051110-51051129 | None:intergenic | 55.0% | |
| GCAGTCACTGCTTGTGCTAC+TGG | - | chr1.1:51052507-51052526 | MS.gene89534:intron | 55.0% | |
| GGGAACAAGCGCAGCAACTT+TGG | + | chr1.1:51050591-51050610 | None:intergenic | 55.0% | |
| GGGGCTATTGGTCATCTCCT+TGG | - | chr1.1:51055279-51055298 | MS.gene89534:CDS | 55.0% | |
| GGGTTTAGAAGGGGAAGGGA+GGG | - | chr1.1:51054454-51054473 | MS.gene89534:CDS | 55.0% | |
| GGTTTAGAAGGGGAAGGGAG+GGG | - | chr1.1:51054455-51054474 | MS.gene89534:CDS | 55.0% | |
| GTGTCTATTGGTGGGGGAAC+TGG | - | chr1.1:51051582-51051601 | MS.gene89534:intron | 55.0% | |
| GTTCCCACTGGAACTAACCC+TGG | - | chr1.1:51050605-51050624 | MS.gene89534:intron | 55.0% | |
| GTTGCCTGTCCAGCAACTAC+AGG | + | chr1.1:51051961-51051980 | None:intergenic | 55.0% | |
| TCCCACTGAGCAGGAACACA+AGG | - | chr1.1:51051465-51051484 | MS.gene89534:intron | 55.0% | |
| TGAGCTGGCGCATTGGACAT+AGG | + | chr1.1:51054036-51054055 | None:intergenic | 55.0% | |
| TGTCAAGTCGTCAACCAGGG+TGG | + | chr1.1:51053650-51053669 | None:intergenic | 55.0% | |
| TTGGGAGAGGGCAAGAGCTA+AGG | + | chr1.1:51053501-51053520 | None:intergenic | 55.0% | |
| TTGGGCATGGTGACACCTCT+TGG | - | chr1.1:51050434-51050453 | MS.gene89534:intron | 55.0% | |
| ! | AAAGGCTAGCTCATGGGGTG+AGG | + | chr1.1:51053430-51053449 | None:intergenic | 55.0% |
| ! | AAGGCTAGCTCATGGGGTGA+GGG | + | chr1.1:51053429-51053448 | None:intergenic | 55.0% |
| ! | ACCCCAAAGGCTAGCTCATG+GGG | + | chr1.1:51053435-51053454 | None:intergenic | 55.0% |
| ! | CAACCCCAAAGGCTAGCTCA+TGG | + | chr1.1:51053437-51053456 | None:intergenic | 55.0% |
| ! | CAACCTCCTAGTGATGGGAG+AGG | - | chr1.1:51053267-51053286 | MS.gene89534:CDS | 55.0% |
| ! | CGGAACATCGCGAAGGGTTT+TGG | - | chr1.1:51050250-51050269 | MS.gene89534:CDS | 55.0% |
| !! | ACCCCATGAGCTAGCCTTTG+GGG | - | chr1.1:51053431-51053450 | MS.gene89534:intron | 55.0% |
| !! | AGGTCTGGCGGTTTTGGCAA+TGG | - | chr1.1:51053616-51053635 | MS.gene89534:intron | 55.0% |
| !! | CAAGCCCACAAGAAGCATCG+CGG | - | chr1.1:51052775-51052794 | MS.gene89534:CDS | 55.0% |
| !! | CACCCCATGAGCTAGCCTTT+GGG | - | chr1.1:51053430-51053449 | MS.gene89534:intron | 55.0% |
| !! | TCACCCCATGAGCTAGCCTT+TGG | - | chr1.1:51053429-51053448 | MS.gene89534:intron | 55.0% |
| !! | TCAGGGGGTGTCTATTGGTG+GGG | - | chr1.1:51051575-51051594 | MS.gene89534:intron | 55.0% |
| !! | TGATGGGAGAGGTGCCATTC+TGG | - | chr1.1:51053278-51053297 | MS.gene89534:CDS | 55.0% |
| AAGGGCCGCGATGCTTCTTG+TGG | + | chr1.1:51052783-51052802 | None:intergenic | 60.0% | |
| AGGGCCGCGATGCTTCTTGT+GGG | + | chr1.1:51052782-51052801 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr1.1:51054641-51054660 | None:intergenic | 60.0% | |
| CAACAGCTCCAGCAGCACCA+AGG | + | chr1.1:51055299-51055318 | None:intergenic | 60.0% | |
| GCACCTCTCCCATCACTAGG+AGG | + | chr1.1:51053273-51053292 | None:intergenic | 60.0% | |
| GCATCGCGGCCCTTTGATAG+TGG | - | chr1.1:51052789-51052808 | MS.gene89534:intron | 60.0% | |
| GCGACGAAGACGCTGCATAC+AGG | + | chr1.1:51051803-51051822 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr1.1:51054640-51054659 | None:intergenic | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr1.1:51054639-51054658 | None:intergenic | 60.0% | |
| GTTGCTGCGCTTGTTCCCAC+TGG | - | chr1.1:51050593-51050612 | MS.gene89534:CDS | 60.0% | |
| TAGAAGGGGAAGGGAGGGGA+GGG | - | chr1.1:51054459-51054478 | MS.gene89534:CDS | 60.0% | |
| TTAGAAGGGGAAGGGAGGGG+AGG | - | chr1.1:51054458-51054477 | MS.gene89534:CDS | 60.0% | |
| ! | GCATCGAGGTCTGGCGGTTT+TGG | - | chr1.1:51053610-51053629 | MS.gene89534:intron | 60.0% |
| !! | CAGGGGGTGTCTATTGGTGG+GGG | - | chr1.1:51051576-51051595 | MS.gene89534:intron | 60.0% |
| !! | GGTAAGGGCACTGCGTTTGG+AGG | - | chr1.1:51050505-51050524 | MS.gene89534:intron | 60.0% |
| !! | GGTCATCTCCTTGGTGCTGC+TGG | - | chr1.1:51055288-51055307 | MS.gene89534:CDS | 60.0% |
| !! | TGGGGTAAGGGCACTGCGTT+TGG | - | chr1.1:51050502-51050521 | MS.gene89534:intron | 60.0% |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr1.1:51054636-51054655 | None:intergenic | 65.0% | |
| ! | GCGTGGCGGAACATCGCGAA+GGG | - | chr1.1:51050244-51050263 | MS.gene89534:CDS | 65.0% |
| ! | TGCGTGGCGGAACATCGCGA+AGG | - | chr1.1:51050243-51050262 | MS.gene89534:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 51050236 | 51055657 | 51050236 | ID=MS.gene89534 |
| chr1.1 | mRNA | 51050236 | 51055657 | 51050236 | ID=MS.gene89534.t1;Parent=MS.gene89534 |
| chr1.1 | exon | 51055543 | 51055657 | 51055543 | ID=MS.gene89534.t1.exon1;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51055543 | 51055657 | 51055543 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51055232 | 51055461 | 51055232 | ID=MS.gene89534.t1.exon2;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51055232 | 51055461 | 51055232 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51054398 | 51054505 | 51054398 | ID=MS.gene89534.t1.exon3;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51054398 | 51054505 | 51054398 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51054243 | 51054314 | 51054243 | ID=MS.gene89534.t1.exon4;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51054243 | 51054314 | 51054243 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51053996 | 51054082 | 51053996 | ID=MS.gene89534.t1.exon5;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51053996 | 51054082 | 51053996 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51053250 | 51053401 | 51053250 | ID=MS.gene89534.t1.exon6;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51053250 | 51053401 | 51053250 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51053067 | 51053147 | 51053067 | ID=MS.gene89534.t1.exon7;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51053067 | 51053147 | 51053067 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51052901 | 51052934 | 51052901 | ID=MS.gene89534.t1.exon8;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51052901 | 51052934 | 51052901 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51052732 | 51052798 | 51052732 | ID=MS.gene89534.t1.exon9;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51052732 | 51052798 | 51052732 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51052570 | 51052646 | 51052570 | ID=MS.gene89534.t1.exon10;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51052570 | 51052646 | 51052570 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51051033 | 51051093 | 51051033 | ID=MS.gene89534.t1.exon11;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51051033 | 51051093 | 51051033 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51050821 | 51050903 | 51050821 | ID=MS.gene89534.t1.exon12;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51050821 | 51050903 | 51050821 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51050543 | 51050614 | 51050543 | ID=MS.gene89534.t1.exon13;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51050543 | 51050614 | 51050543 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| chr1.1 | exon | 51050236 | 51050406 | 51050236 | ID=MS.gene89534.t1.exon14;Parent=MS.gene89534.t1 |
| chr1.1 | CDS | 51050236 | 51050406 | 51050236 | ID=cds.MS.gene89534.t1;Parent=MS.gene89534.t1 |
| Gene Sequence |
| Protein sequence |
