Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94820.t1 | XP_013468411.1 | 95.1 | 474 | 17 | 2 | 1 | 469 | 1 | 473 | 1.50E-252 | 881.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94820.t1 | Q8L3X9 | 77.4 | 434 | 95 | 1 | 31 | 464 | 29 | 459 | 9.0e-198 | 691.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94820.t1 | A0A072VM15 | 95.1 | 474 | 17 | 2 | 1 | 469 | 1 | 473 | 1.1e-252 | 881.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene94820 | MS.gene36484 | PPI |
| MS.gene94820 | MS.gene070951 | PPI |
| MS.gene34377 | MS.gene94820 | PPI |
| MS.gene94820 | MS.gene35149 | PPI |
| MS.gene95807 | MS.gene94820 | PPI |
| MS.gene94820 | MS.gene023146 | PPI |
| MS.gene94820 | MS.gene006411 | PPI |
| MS.gene94820 | MS.gene028308 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94820.t1 | MTR_1g069385 | 96.203 | 474 | 12 | 2 | 1 | 469 | 1 | 473 | 0.0 | 929 |
| MS.gene94820.t1 | MTR_1g069385 | 99.143 | 350 | 3 | 0 | 120 | 469 | 1 | 350 | 0.0 | 710 |
| MS.gene94820.t1 | MTR_4g124880 | 41.686 | 439 | 219 | 8 | 33 | 464 | 80 | 488 | 6.01e-93 | 290 |
| MS.gene94820.t1 | MTR_2g043530 | 39.093 | 463 | 255 | 7 | 4 | 464 | 48 | 485 | 3.85e-92 | 288 |
| MS.gene94820.t1 | MTR_1g103020 | 38.710 | 434 | 239 | 6 | 33 | 464 | 60 | 468 | 7.32e-92 | 287 |
| MS.gene94820.t1 | MTR_4g124880 | 45.402 | 348 | 177 | 5 | 122 | 464 | 3 | 342 | 1.88e-91 | 281 |
| MS.gene94820.t1 | MTR_8g099695 | 36.344 | 465 | 262 | 7 | 9 | 464 | 39 | 478 | 8.38e-91 | 285 |
| MS.gene94820.t1 | MTR_4g096690 | 39.401 | 434 | 236 | 7 | 33 | 464 | 58 | 466 | 2.69e-88 | 278 |
| MS.gene94820.t1 | MTR_2g043530 | 39.294 | 425 | 231 | 7 | 4 | 426 | 48 | 447 | 8.27e-82 | 260 |
| MS.gene94820.t1 | MTR_8g099715 | 33.796 | 432 | 212 | 9 | 33 | 464 | 33 | 390 | 1.38e-70 | 229 |
| MS.gene94820.t1 | MTR_8g099700 | 31.418 | 261 | 130 | 5 | 33 | 291 | 76 | 289 | 5.76e-32 | 124 |
| MS.gene94820.t1 | MTR_8g099705 | 45.545 | 101 | 52 | 1 | 321 | 421 | 1 | 98 | 3.47e-19 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94820.t1 | AT2G04540 | 77.419 | 434 | 95 | 1 | 31 | 464 | 29 | 459 | 0.0 | 692 |
| MS.gene94820.t1 | AT5G46290 | 38.940 | 434 | 238 | 6 | 33 | 464 | 61 | 469 | 1.18e-92 | 289 |
| MS.gene94820.t1 | AT5G46290 | 37.778 | 450 | 237 | 7 | 33 | 464 | 61 | 485 | 6.82e-90 | 282 |
| MS.gene94820.t1 | AT1G74960 | 39.062 | 448 | 242 | 7 | 21 | 464 | 118 | 538 | 5.07e-88 | 279 |
| MS.gene94820.t1 | AT1G74960 | 39.062 | 448 | 242 | 7 | 21 | 464 | 118 | 538 | 5.07e-88 | 279 |
| MS.gene94820.t1 | AT1G74960 | 39.062 | 448 | 242 | 7 | 21 | 464 | 118 | 538 | 5.07e-88 | 279 |
| MS.gene94820.t1 | AT5G46290 | 34.332 | 434 | 203 | 8 | 33 | 464 | 61 | 414 | 7.71e-67 | 220 |
Find 109 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGATATGCTTCGGTAAA+TGG | 0.144969 | 1.4:+55923305 | None:intergenic |
| CGGAACATCGCGAAGGGTTT+TGG | 0.152340 | 1.4:-55923331 | MS.gene94820:CDS |
| ACAAGGCCAGATTCTGTATT+TGG | 0.163247 | 1.4:-55918117 | MS.gene94820:CDS |
| GTGAATTCAACGACGAAATT+TGG | 0.170597 | 1.4:-55922951 | MS.gene94820:CDS |
| CGAAATTTGGCTTAATTCTA+AGG | 0.209556 | 1.4:-55922938 | MS.gene94820:intron |
| ACGAATCTCTGCATAGATTT+TGG | 0.215851 | 1.4:+55920528 | None:intergenic |
| GCAATGAGAATGATTCAATT+TGG | 0.244331 | 1.4:-55921104 | MS.gene94820:CDS |
| GCAGTCACTGCTTGTGCTAC+TGG | 0.246599 | 1.4:-55921146 | MS.gene94820:CDS |
| ACTTGGAACCAACTAATTAA+TGG | 0.270968 | 1.4:-55923105 | MS.gene94820:CDS |
| AAGCTCTTAAAGATTCTAAT+TGG | 0.273978 | 1.4:-55922211 | MS.gene94820:CDS |
| CAATGAGAATGATTCAATTT+GGG | 0.278917 | 1.4:-55921103 | MS.gene94820:CDS |
| TTTGACATAGCTACTCTAAT+TGG | 0.296884 | 1.4:+55918057 | None:intergenic |
| GTAGCTATGTCAAACTCTTT+TGG | 0.297068 | 1.4:-55918048 | MS.gene94820:CDS |
| ATTGATGCATTATCAATTGC+AGG | 0.313043 | 1.4:-55921041 | MS.gene94820:CDS |
| GGCCACGTTAGCATGAAATA+TGG | 0.325924 | 1.4:-55921781 | MS.gene94820:CDS |
| TGGGGTAAGGGCACTGCGTT+TGG | 0.333218 | 1.4:-55923076 | MS.gene94820:CDS |
| CTTGTTAAATTAAGAGTTAA+TGG | 0.337796 | 1.4:+55918135 | None:intergenic |
| GGTCATCTCCTTGGTGCTGC+TGG | 0.343211 | 1.4:-55918343 | MS.gene94820:CDS |
| GCTAGCATGGTCAGAGAATA+TGG | 0.347485 | 1.4:+55918611 | None:intergenic |
| TGATGGGAGAGGTGCCATTC+TGG | 0.350310 | 1.4:-55920373 | MS.gene94820:CDS |
| CTCAGGATAGGTGAAGGTTC+TGG | 0.377739 | 1.4:-55920699 | MS.gene94820:intron |
| TTGTCACCAAATACAGAATC+TGG | 0.389800 | 1.4:+55918111 | None:intergenic |
| GCAGTGACTGCAGCATGATT+TGG | 0.395312 | 1.4:+55921158 | None:intergenic |
| AGGAACAAGCGCAGCAACTT+TGG | 0.400834 | 1.4:+55922990 | None:intergenic |
| ACCGGTGACAACTACTCTTC+GGG | 0.405117 | 1.4:+55923251 | None:intergenic |
| CATGACTCGTGCTTTAAAAC+AGG | 0.411211 | 1.4:-55920349 | MS.gene94820:intron |
| GCTACTGGGTCACATTCTAT+TGG | 0.420147 | 1.4:-55921131 | MS.gene94820:CDS |
| TAGCATGAAATATGGGTTCC+AGG | 0.420812 | 1.4:-55921773 | MS.gene94820:intron |
| CATGCCATTGACTGCTTCAA+AGG | 0.421259 | 1.4:-55918085 | MS.gene94820:CDS |
| ATTTGGGGATGCAGATGTTA+TGG | 0.426257 | 1.4:-55921087 | MS.gene94820:CDS |
| TATGCAGAGATTCGTGGCTA+TGG | 0.430190 | 1.4:-55920520 | MS.gene94820:CDS |
| CAGTCACTGCTTGTGCTACT+GGG | 0.430249 | 1.4:-55921145 | MS.gene94820:CDS |
| TCCTTGTGTTCCTGCTCAGT+GGG | 0.431783 | 1.4:+55922185 | None:intergenic |
| GGGGCTATTGGTCATCTCCT+TGG | 0.431894 | 1.4:-55918352 | MS.gene94820:CDS |
| AACCGGTGACAACTACTCTT+CGG | 0.433030 | 1.4:+55923250 | None:intergenic |
| AGGTTCTGGAGTCTTGGTCT+TGG | 0.434365 | 1.4:-55920685 | MS.gene94820:CDS |
| AATTGATAATGCATCAATAC+TGG | 0.442107 | 1.4:+55921046 | None:intergenic |
| AGGGCCGCGATGCTTCTTGC+GGG | 0.445499 | 1.4:+55920874 | None:intergenic |
| TTCTGGAGTCTTGGTCTTGG+AGG | 0.446638 | 1.4:-55920682 | MS.gene94820:intron |
| GAATTCACCAGGGTTAGTTC+CGG | 0.457256 | 1.4:+55922966 | None:intergenic |
| AAGCTTTATCTGATATGCTT+CGG | 0.465093 | 1.4:+55923298 | None:intergenic |
| TTGGGCATGGTGACACCTCT+TGG | 0.467880 | 1.4:-55923144 | MS.gene94820:CDS |
| TTAATGGAAAATGTGGGGTA+AGG | 0.468366 | 1.4:-55923089 | MS.gene94820:CDS |
| CATTAACTCTTAATTTAACA+AGG | 0.477564 | 1.4:-55918134 | MS.gene94820:CDS |
| CATGCTACATCTACACCTTT+AGG | 0.481993 | 1.4:-55918792 | MS.gene94820:intron |
| AAGGGCCGCGATGCTTCTTG+CGG | 0.482583 | 1.4:+55920873 | None:intergenic |
| TAATTGGTTTCCCACTGAGC+AGG | 0.484051 | 1.4:-55922195 | MS.gene94820:CDS |
| CAACTAATTAATGGAAAATG+TGG | 0.484527 | 1.4:-55923096 | MS.gene94820:CDS |
| TAATGGAAAATGTGGGGTAA+GGG | 0.484865 | 1.4:-55923088 | MS.gene94820:CDS |
| ATTCGTGGCTATGGGATGTC+AGG | 0.488176 | 1.4:-55920511 | MS.gene94820:intron |
| GCATCGCGGCCCTTTGATAG+TGG | 0.490347 | 1.4:-55920864 | MS.gene94820:CDS |
| GGTAAGGGCACTGCGTTTGG+AGG | 0.494902 | 1.4:-55923073 | MS.gene94820:CDS |
| AGGTGAAGGTTCTGGAGTCT+TGG | 0.497176 | 1.4:-55920691 | MS.gene94820:CDS |
| CCCTTTGATAGTGGTCGAGA+TGG | 0.506777 | 1.4:-55920855 | MS.gene94820:CDS |
| GTTGTGGAGTCCATAAAACT+TGG | 0.511122 | 1.4:-55923122 | MS.gene94820:CDS |
| ATTTCGTCGTTGAATTCACC+AGG | 0.512525 | 1.4:+55922955 | None:intergenic |
| ATATTGATAAACATGGCATC+AGG | 0.513692 | 1.4:-55921802 | MS.gene94820:CDS |
| GCCACGTTAGCATGAAATAT+GGG | 0.514383 | 1.4:-55921780 | MS.gene94820:CDS |
| AAAATCTATGCAGAGATTCG+TGG | 0.515530 | 1.4:-55920526 | MS.gene94820:CDS |
| TGCAACCACTCTTACCTTGG+TGG | 0.516765 | 1.4:+55918566 | None:intergenic |
| GATGCAGATGTTATGGTGAC+TGG | 0.517325 | 1.4:-55921080 | MS.gene94820:CDS |
| TGCTCAACTGATATGTGAAA+AGG | 0.518775 | 1.4:-55922022 | MS.gene94820:intron |
| AGAATCTTTAAGAGCTTCAT+CGG | 0.520139 | 1.4:+55922217 | None:intergenic |
| GTTGCTGCGCTTGTTCCTAC+CGG | 0.521941 | 1.4:-55922985 | MS.gene94820:CDS |
| ATGCAGAGATTCGTGGCTAT+GGG | 0.522380 | 1.4:-55920519 | MS.gene94820:CDS |
| AACTAATTAATGGAAAATGT+GGG | 0.522501 | 1.4:-55923095 | MS.gene94820:CDS |
| ATCTCCTTTGAAGCAGTCAA+TGG | 0.522727 | 1.4:+55918081 | None:intergenic |
| TTCCTTGTGTTCCTGCTCAG+TGG | 0.523925 | 1.4:+55922184 | None:intergenic |
| TCCCGAAGAGTAGTTGTCAC+CGG | 0.532836 | 1.4:-55923252 | MS.gene94820:intron |
| TCCATCTCGACCACTATCAA+AGG | 0.533832 | 1.4:+55920854 | None:intergenic |
| TCTTACCTTGGTGGATGAGA+AGG | 0.535724 | 1.4:+55918575 | None:intergenic |
| GAAGAAACAAGAGGAGGAGG+TGG | 0.549891 | 1.4:+55923273 | None:intergenic |
| AGCACGAGTCATGGCCAGAA+TGG | 0.551728 | 1.4:+55920359 | None:intergenic |
| ATTACTCAACCTCCTAGTGA+TGG | 0.557704 | 1.4:-55920390 | MS.gene94820:CDS |
| GGAAGTCAATTGATCAAATG+TGG | 0.558097 | 1.4:+55923011 | None:intergenic |
| TTGATGTAATCTACATCAGA+AGG | 0.558485 | 1.4:+55918819 | None:intergenic |
| TAATGCATCAATACTGGACT+CGG | 0.561888 | 1.4:+55921052 | None:intergenic |
| CTAAAGAAGACGAGCTAGCA+TGG | 0.562258 | 1.4:+55918598 | None:intergenic |
| CGGGAAGAAACAAGAGGAGG+AGG | 0.573055 | 1.4:+55923270 | None:intergenic |
| CCATCTCGACCACTATCAAA+GGG | 0.575537 | 1.4:+55920855 | None:intergenic |
| GTTCCTACCGGAACTAACCC+TGG | 0.581966 | 1.4:-55922973 | MS.gene94820:CDS |
| TTACTCAACCTCCTAGTGAT+GGG | 0.586083 | 1.4:-55920389 | MS.gene94820:CDS |
| TCCCACTGAGCAGGAACACA+AGG | 0.586433 | 1.4:-55922186 | MS.gene94820:CDS |
| ATGGCACCTCTCCCATCACT+AGG | 0.594673 | 1.4:+55920378 | None:intergenic |
| ATGGTGACACCTCTTGGTTG+TGG | 0.599365 | 1.4:-55923138 | MS.gene94820:CDS |
| ATTGTATGTAGGTTTGGGCA+TGG | 0.609629 | 1.4:-55923157 | MS.gene94820:intron |
| CAACCTCCTAGTGATGGGAG+AGG | 0.613052 | 1.4:-55920384 | MS.gene94820:CDS |
| AGGAACATCGATCCGTGACA+AGG | 0.617850 | 1.4:-55922265 | MS.gene94820:CDS |
| ACCACGGATATTGATAAACA+TGG | 0.621168 | 1.4:-55921809 | MS.gene94820:CDS |
| GCGTGGCGGAACATCGCGAA+GGG | 0.625508 | 1.4:-55923337 | MS.gene94820:CDS |
| TGCGTGGCGGAACATCGCGA+AGG | 0.630823 | 1.4:-55923338 | MS.gene94820:CDS |
| ACTAATTAATGGAAAATGTG+GGG | 0.632550 | 1.4:-55923094 | MS.gene94820:CDS |
| AATGAGAATGATTCAATTTG+GGG | 0.633075 | 1.4:-55921102 | MS.gene94820:CDS |
| ACCCATATTTCATGCTAACG+TGG | 0.635539 | 1.4:+55921779 | None:intergenic |
| ATATGCTATAAACCTTGTCA+CGG | 0.641292 | 1.4:+55922253 | None:intergenic |
| TTTAGCCTTCTCATCCACCA+AGG | 0.647399 | 1.4:-55918580 | MS.gene94820:intron |
| TTGTTTGTGATGGCAATGCG+TGG | 0.649163 | 1.4:-55923354 | None:intergenic |
| GCACCTCTCCCATCACTAGG+AGG | 0.650311 | 1.4:+55920381 | None:intergenic |
| GCCATGTTTATCAATATCCG+TGG | 0.652979 | 1.4:+55921808 | None:intergenic |
| GCAGGAACACAAGGAAAGAA+CGG | 0.661590 | 1.4:-55922177 | MS.gene94820:intron |
| CAACAGCTCCAGCAGCACCA+AGG | 0.665891 | 1.4:+55918335 | None:intergenic |
| ACTCTTCGGGAAGAAACAAG+AGG | 0.666135 | 1.4:+55923264 | None:intergenic |
| TTTCGTCGTTGAATTCACCA+GGG | 0.690900 | 1.4:+55922956 | None:intergenic |
| TCACCAGGGTTAGTTCCGGT+AGG | 0.691288 | 1.4:+55922970 | None:intergenic |
| TTTGTGATGGCAATGCGTGG+CGG | 0.692252 | 1.4:-55923351 | None:intergenic |
| TTATGGACTCCACAACCAAG+AGG | 0.692764 | 1.4:+55923129 | None:intergenic |
| CAAGCCCGCAAGAAGCATCG+CGG | 0.711373 | 1.4:-55920878 | MS.gene94820:CDS |
| CTTCGGGAAGAAACAAGAGG+AGG | 0.712604 | 1.4:+55923267 | None:intergenic |
| GCAGATGTTATGGTGACTGG+AGG | 0.730564 | 1.4:-55921077 | MS.gene94820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATTCTATTTAAATTAAA+AGG | - | chr1.4:55918870-55918889 | MS.gene94820:intron | 10.0% |
| !!! | TTTTTCTCTTAAATTTTTAA+TGG | + | chr1.4:55922901-55922920 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAACTTGAATG+AGG | + | chr1.4:55919391-55919410 | None:intergenic | 15.0% |
| !! | ATTTAAGAGAAAAATTTGAA+TGG | - | chr1.4:55922907-55922926 | MS.gene94820:intron | 15.0% |
| !! | TTAAAAAATGGTTGTAATAT+AGG | - | chr1.4:55918583-55918602 | MS.gene94820:CDS | 15.0% |
| !! | TTTAAGAGAAAAATTTGAAT+GGG | - | chr1.4:55922908-55922927 | MS.gene94820:intron | 15.0% |
| !!! | GACAGTTATTTTTTAAAAAA+TGG | - | chr1.4:55918571-55918590 | MS.gene94820:intron | 15.0% |
| !!! | TACATTTCTTGTTTAAATTA+CGG | + | chr1.4:55922320-55922339 | None:intergenic | 15.0% |
| !!! | TACTTTTCATTTTGAAATTA+CGG | - | chr1.4:55922194-55922213 | MS.gene94820:CDS | 15.0% |
| !!! | TTATAAGTTTTTAACTCAAA+TGG | - | chr1.4:55920008-55920027 | MS.gene94820:intron | 15.0% |
| !!! | TTTAACTTCAAAATTAATCA+GGG | - | chr1.4:55919248-55919267 | MS.gene94820:intron | 15.0% |
| !!! | TTTTAACTTCAAAATTAATC+AGG | - | chr1.4:55919247-55919266 | MS.gene94820:intron | 15.0% |
| !!! | TTTTTATATTTAAGTGCTTT+TGG | - | chr1.4:55922077-55922096 | MS.gene94820:intron | 15.0% |
| !! | AAAAACTACTTTCGATTTAT+TGG | - | chr1.4:55919593-55919612 | MS.gene94820:intron | 20.0% |
| !! | AACTAATTAATGGAAAATGT+GGG | - | chr1.4:55918246-55918265 | MS.gene94820:intron | 20.0% |
| !! | AAGTATAAAGAAAACAAAGT+TGG | - | chr1.4:55918949-55918968 | MS.gene94820:intron | 20.0% |
| !! | AATATTCAAACTTAAATTGC+TGG | + | chr1.4:55922604-55922623 | None:intergenic | 20.0% |
| !! | ACAAAGACAAATAACTAATA+AGG | + | chr1.4:55920379-55920398 | None:intergenic | 20.0% |
| !! | ACTTATTATGTATGAATAAG+TGG | - | chr1.4:55921086-55921105 | MS.gene94820:CDS | 20.0% |
| !! | AGTGACAATTAAAGTTAAAA+AGG | + | chr1.4:55921867-55921886 | None:intergenic | 20.0% |
| !! | ATATCTACATAAGTTAGTAA+AGG | + | chr1.4:55919677-55919696 | None:intergenic | 20.0% |
| !! | CATTAACTCTTAATTTAACA+AGG | - | chr1.4:55923207-55923226 | MS.gene94820:intron | 20.0% |
| !! | CCAACAAAAAAAAAAACTTT+GGG | + | chr1.4:55921209-55921228 | None:intergenic | 20.0% |
| !! | CTTATTATGTATGAATAAGT+GGG | - | chr1.4:55921087-55921106 | MS.gene94820:CDS | 20.0% |
| !! | CTTGTTAAATTAAGAGTTAA+TGG | + | chr1.4:55923209-55923228 | None:intergenic | 20.0% |
| !! | GGAAATGAATAAACAAAAAA+AGG | + | chr1.4:55920754-55920773 | None:intergenic | 20.0% |
| !! | TCCAACAAAAAAAAAAACTT+TGG | + | chr1.4:55921210-55921229 | None:intergenic | 20.0% |
| !! | TGAACATTAAGCAAAATAAA+TGG | + | chr1.4:55920561-55920580 | None:intergenic | 20.0% |
| !! | TGATACTTAAAAACTGATAT+TGG | - | chr1.4:55920404-55920423 | MS.gene94820:CDS | 20.0% |
| !! | TTAACTTCAAAATTAATCAG+GGG | - | chr1.4:55919249-55919268 | MS.gene94820:intron | 20.0% |
| !! | TTAAGAGAAAAATTTGAATG+GGG | - | chr1.4:55922909-55922928 | MS.gene94820:intron | 20.0% |
| !! | TTTGATATCATTAACACTTA+GGG | + | chr1.4:55922387-55922406 | None:intergenic | 20.0% |
| !!! | ATATGAAGTATTTGACATAT+TGG | - | chr1.4:55918839-55918858 | MS.gene94820:intron | 20.0% |
| !!! | ATTCAAACTGTTTTCATATA+AGG | - | chr1.4:55918494-55918513 | MS.gene94820:intron | 20.0% |
| !!! | GTGTTATTATAAGTTTCTTT+TGG | - | chr1.4:55918976-55918995 | MS.gene94820:intron | 20.0% |
| !!! | TAATTTTTTCTGATTGGATA+TGG | + | chr1.4:55919872-55919891 | None:intergenic | 20.0% |
| !!! | TTTATAACTCTAAAACCTTT+GGG | + | chr1.4:55921367-55921386 | None:intergenic | 20.0% |
| !!! | TTTTATAACTCTAAAACCTT+TGG | + | chr1.4:55921368-55921387 | None:intergenic | 20.0% |
| !!! | TTTTGGCATATATTATTTCA+GGG | - | chr1.4:55922094-55922113 | MS.gene94820:intron | 20.0% |
| ! | AAGACAAATAACTAATAAGG+TGG | + | chr1.4:55920376-55920395 | None:intergenic | 25.0% |
| ! | AAGCTCTTAAAGATTCTAAT+TGG | - | chr1.4:55919130-55919149 | MS.gene94820:intron | 25.0% |
| ! | AATAAAATCTCATGTATTCG+TGG | - | chr1.4:55918153-55918172 | MS.gene94820:intron | 25.0% |
| ! | AATATCCGTGGTATAAAAAA+TGG | + | chr1.4:55919524-55919543 | None:intergenic | 25.0% |
| ! | AATGAGAATGATTCAATTTG+GGG | - | chr1.4:55920239-55920258 | MS.gene94820:intron | 25.0% |
| ! | ACTAATTAATGGAAAATGTG+GGG | - | chr1.4:55918247-55918266 | MS.gene94820:intron | 25.0% |
| ! | ACTATTAGATTAAGCATACA+GGG | + | chr1.4:55923150-55923169 | None:intergenic | 25.0% |
| ! | ATAGATTAAGCACAAATTCA+CGG | + | chr1.4:55923120-55923139 | None:intergenic | 25.0% |
| ! | CAACTAATTAATGGAAAATG+TGG | - | chr1.4:55918245-55918264 | MS.gene94820:intron | 25.0% |
| ! | CAATAAGCATAATAGTTGTT+CGG | + | chr1.4:55919022-55919041 | None:intergenic | 25.0% |
| ! | CAATGAGAATGATTCAATTT+GGG | - | chr1.4:55920238-55920257 | MS.gene94820:intron | 25.0% |
| ! | GAAAACACAACAATACAATA+TGG | + | chr1.4:55922418-55922437 | None:intergenic | 25.0% |
| ! | GATAATAAGAGAAATAGAAC+AGG | + | chr1.4:55921791-55921810 | None:intergenic | 25.0% |
| ! | GTTTGATATCATTAACACTT+AGG | + | chr1.4:55922388-55922407 | None:intergenic | 25.0% |
| ! | TAACAAATACAAAGCAACAT+AGG | + | chr1.4:55921030-55921049 | None:intergenic | 25.0% |
| ! | TAACTTCAAAATTAATCAGG+GGG | - | chr1.4:55919250-55919269 | MS.gene94820:intron | 25.0% |
| ! | TAATTATATGCTCATCTGTT+TGG | - | chr1.4:55922813-55922832 | MS.gene94820:intron | 25.0% |
| ! | TATTCATTTCCCTATTGTTT+AGG | - | chr1.4:55920763-55920782 | MS.gene94820:intron | 25.0% |
| ! | TCCTGAGTAAAAACATAAAT+TGG | + | chr1.4:55920629-55920648 | None:intergenic | 25.0% |
| ! | TCTTTAGATATATAGAATGC+AGG | - | chr1.4:55919721-55919740 | MS.gene94820:intron | 25.0% |
| ! | TGAAAAACAGTGTATTAAAC+TGG | - | chr1.4:55920064-55920083 | MS.gene94820:intron | 25.0% |
| ! | TGAAGTTAAAATACAATGCA+AGG | + | chr1.4:55919238-55919257 | None:intergenic | 25.0% |
| ! | TGAATGAAATTATCATGTGA+AGG | - | chr1.4:55922052-55922071 | MS.gene94820:CDS | 25.0% |
| ! | TTTGAATTGTATGTAGGTTT+GGG | - | chr1.4:55918179-55918198 | MS.gene94820:intron | 25.0% |
| !! | AAAAAAAAAAACTTTGGGAG+AGG | + | chr1.4:55921204-55921223 | None:intergenic | 25.0% |
| !! | AAAAAAAAAACTTTGGGAGA+GGG | + | chr1.4:55921203-55921222 | None:intergenic | 25.0% |
| !! | ACGGTATGCAAATTTTTATA+TGG | - | chr1.4:55919183-55919202 | MS.gene94820:intron | 25.0% |
| !! | CACATTTTCCATTAATTAGT+TGG | + | chr1.4:55918247-55918266 | None:intergenic | 25.0% |
| !! | CTTTTGGCATATATTATTTC+AGG | - | chr1.4:55922093-55922112 | MS.gene94820:intron | 25.0% |
| !! | GTAATATGTTTGTTAGTTGA+CGG | + | chr1.4:55921840-55921859 | None:intergenic | 25.0% |
| !! | TGAGTTATATTTTGTACTCA+AGG | + | chr1.4:55920445-55920464 | None:intergenic | 25.0% |
| !! | TTTTGAATTGTATGTAGGTT+TGG | - | chr1.4:55918178-55918197 | MS.gene94820:intron | 25.0% |
| !!! | AATTGATAATGCATCAATAC+TGG | + | chr1.4:55920298-55920317 | None:intergenic | 25.0% |
| !!! | ATCAGTTTTTAAGTATCAGA+GGG | + | chr1.4:55920402-55920421 | None:intergenic | 25.0% |
| !!! | ATTTCATATGGATTTTGACT+AGG | - | chr1.4:55920915-55920934 | MS.gene94820:intron | 25.0% |
| !!! | CCATTCTAGTTTTGTTATTA+GGG | - | chr1.4:55921616-55921635 | MS.gene94820:intron | 25.0% |
| !!! | CCCAAAGTTTTTTTTTTTGT+TGG | - | chr1.4:55921206-55921225 | MS.gene94820:intron | 25.0% |
| !!! | GGTAAGTTAAATTTTTTGTG+TGG | - | chr1.4:55920680-55920699 | MS.gene94820:intron | 25.0% |
| !!! | TATCAGTTTTTAAGTATCAG+AGG | + | chr1.4:55920403-55920422 | None:intergenic | 25.0% |
| !!! | TCCAATTTATGTTTTTACTC+AGG | - | chr1.4:55920625-55920644 | MS.gene94820:intron | 25.0% |
| !!! | TTAGTCCATTTTTTATACCA+CGG | - | chr1.4:55919516-55919535 | MS.gene94820:intron | 25.0% |
| !!! | TTTATGTTTTTACTCAGGAT+AGG | - | chr1.4:55920630-55920649 | MS.gene94820:intron | 25.0% |
| !!! | TTTCATATGGATTTTGACTA+GGG | - | chr1.4:55920916-55920935 | MS.gene94820:intron | 25.0% |
| !!! | TTTGCTTAATGTTCACTTTT+TGG | - | chr1.4:55920566-55920585 | MS.gene94820:intron | 25.0% |
| !!! | TTTTAAAAGAGTAAGAAGCA+TGG | + | chr1.4:55919837-55919856 | None:intergenic | 25.0% |
| AAAAACTGATATTGGAATGC+AGG | - | chr1.4:55920412-55920431 | MS.gene94820:intron | 30.0% | |
| AATGGTTGCAATTTAGAGAT+TGG | - | chr1.4:55920026-55920045 | MS.gene94820:intron | 30.0% | |
| ACATTGATGGAAAAGACAAA+GGG | + | chr1.4:55921405-55921424 | None:intergenic | 30.0% | |
| ACCACAAATAAAACTAAGAC+TGG | + | chr1.4:55920888-55920907 | None:intergenic | 30.0% | |
| ACCTATTCAGAAGAAACTAA+GGG | - | chr1.4:55922127-55922146 | MS.gene94820:intron | 30.0% | |
| ACTATATAAGCTTGGCTATT+TGG | - | chr1.4:55921435-55921454 | MS.gene94820:intron | 30.0% | |
| ACTCTTCACAAAAGAACTAT+TGG | - | chr1.4:55921522-55921541 | MS.gene94820:intron | 30.0% | |
| ACTTGGAACCAACTAATTAA+TGG | - | chr1.4:55918236-55918255 | MS.gene94820:intron | 30.0% | |
| ATAATTATATCCGAAGTGAC+AGG | + | chr1.4:55919931-55919950 | None:intergenic | 30.0% | |
| ATATAGGCTTACATGACAAT+AGG | - | chr1.4:55918599-55918618 | MS.gene94820:CDS | 30.0% | |
| ATATGCTATAAACCTTGTCA+CGG | + | chr1.4:55919091-55919110 | None:intergenic | 30.0% | |
| ATATTGATAAACATGGCATC+AGG | - | chr1.4:55919539-55919558 | MS.gene94820:intron | 30.0% | |
| ATCACCTGTATAAAGAATTC+TGG | + | chr1.4:55922685-55922704 | None:intergenic | 30.0% | |
| ATGTTTGAATACTACAACAG+TGG | - | chr1.4:55922628-55922647 | MS.gene94820:intron | 30.0% | |
| ATTATGTATGAATAAGTGGG+AGG | - | chr1.4:55921090-55921109 | MS.gene94820:CDS | 30.0% | |
| ATTGATGCATTATCAATTGC+AGG | - | chr1.4:55920300-55920319 | MS.gene94820:intron | 30.0% | |
| CAAATAACTAATAAGGTGGT+TGG | + | chr1.4:55920372-55920391 | None:intergenic | 30.0% | |
| CACAAATAAAACTAAGACTG+GGG | + | chr1.4:55920886-55920905 | None:intergenic | 30.0% | |
| CACTATTAGATTAAGCATAC+AGG | + | chr1.4:55923151-55923170 | None:intergenic | 30.0% | |
| CAGATGAGCATATAATTAGT+TGG | + | chr1.4:55922811-55922830 | None:intergenic | 30.0% | |
| CCAATAAATAGAGAATGAGA+GGG | + | chr1.4:55921765-55921784 | None:intergenic | 30.0% | |
| CCACAAATAAAACTAAGACT+GGG | + | chr1.4:55920887-55920906 | None:intergenic | 30.0% | |
| CCCTAATAACAAAACTAGAA+TGG | + | chr1.4:55921619-55921638 | None:intergenic | 30.0% | |
| CCTGACTGAAATATATGAAA+AGG | + | chr1.4:55922495-55922514 | None:intergenic | 30.0% | |
| CGAACAACTATTATGCTTAT+TGG | - | chr1.4:55919020-55919039 | MS.gene94820:intron | 30.0% | |
| CTAACCAATCTCTTAAAACA+TGG | + | chr1.4:55919959-55919978 | None:intergenic | 30.0% | |
| CTTCAAATTATTGCTCTGTT+TGG | - | chr1.4:55920589-55920608 | MS.gene94820:intron | 30.0% | |
| GAAATGTCACAATACTACAA+TGG | + | chr1.4:55919052-55919071 | None:intergenic | 30.0% | |
| GATGTCAGGTAATTTATTGT+AGG | - | chr1.4:55920844-55920863 | MS.gene94820:intron | 30.0% | |
| GCAATGAGAATGATTCAATT+TGG | - | chr1.4:55920237-55920256 | MS.gene94820:intron | 30.0% | |
| GGTCAGATTATAAACAAAGA+AGG | + | chr1.4:55920733-55920752 | None:intergenic | 30.0% | |
| GTATGCTTAATCTAATAGTG+CGG | - | chr1.4:55923151-55923170 | MS.gene94820:intron | 30.0% | |
| GTGAAATTATGGAACAGTTA+TGG | + | chr1.4:55922960-55922979 | None:intergenic | 30.0% | |
| TAAGTTAGTAAAGGACAATG+TGG | + | chr1.4:55919668-55919687 | None:intergenic | 30.0% | |
| TACCTATTCAGAAGAAACTA+AGG | - | chr1.4:55922126-55922145 | MS.gene94820:intron | 30.0% | |
| TATAAACAAAGAAGGAGAAC+AGG | + | chr1.4:55920725-55920744 | None:intergenic | 30.0% | |
| TATAGGCTTACATGACAATA+GGG | - | chr1.4:55918600-55918619 | MS.gene94820:CDS | 30.0% | |
| TGAATGCATAATTTGAGAGA+AGG | + | chr1.4:55918130-55918149 | None:intergenic | 30.0% | |
| TTCACAAAAGAACTATTGGT+TGG | - | chr1.4:55921526-55921545 | MS.gene94820:intron | 30.0% | |
| TTCTAAATCAGTTTCACACA+AGG | + | chr1.4:55919797-55919816 | None:intergenic | 30.0% | |
| TTGATGTAATCTACATCAGA+AGG | + | chr1.4:55922525-55922544 | None:intergenic | 30.0% | |
| TTTGACATAGCTACTCTAAT+TGG | + | chr1.4:55923287-55923306 | None:intergenic | 30.0% | |
| ! | AAGCTTTATCTGATATGCTT+CGG | + | chr1.4:55918046-55918065 | None:intergenic | 30.0% |
| ! | AATAAGCTAAAACCAGCTTT+TGG | - | chr1.4:55918687-55918706 | MS.gene94820:intron | 30.0% |
| ! | AATAGTTCTTTTGTGAAGAG+TGG | + | chr1.4:55921523-55921542 | None:intergenic | 30.0% |
| ! | AGAATCTTTAAGAGCTTCAT+CGG | + | chr1.4:55919127-55919146 | None:intergenic | 30.0% |
| ! | CCTTTTCATATATTTCAGTC+AGG | - | chr1.4:55922492-55922511 | MS.gene94820:intron | 30.0% |
| ! | CGAAATTTGGCTTAATTCTA+AGG | - | chr1.4:55918403-55918422 | MS.gene94820:intron | 30.0% |
| ! | GTATAGAGAAAAGTGTAAAC+AGG | - | chr1.4:55918516-55918535 | MS.gene94820:intron | 30.0% |
| ! | GTGGTTGATTTCATTTCATA+TGG | - | chr1.4:55920903-55920922 | MS.gene94820:CDS | 30.0% |
| ! | TATTAAACTGGTTGTTGTTG+TGG | - | chr1.4:55920076-55920095 | MS.gene94820:intron | 30.0% |
| ! | TATTCTCCTCTAAGAACTTA+TGG | + | chr1.4:55918822-55918841 | None:intergenic | 30.0% |
| ! | TGGCTTTTTGAATTGTATGT+AGG | - | chr1.4:55918173-55918192 | MS.gene94820:intron | 30.0% |
| !! | ATAATTTCACTGATTTCAGG+GGG | - | chr1.4:55922970-55922989 | MS.gene94820:CDS | 30.0% |
| !! | CATAATTTCACTGATTTCAG+GGG | - | chr1.4:55922969-55922988 | MS.gene94820:CDS | 30.0% |
| !! | CCATAATTTCACTGATTTCA+GGG | - | chr1.4:55922968-55922987 | MS.gene94820:CDS | 30.0% |
| !! | GTGGTATAAAAAATGGACTA+AGG | + | chr1.4:55919517-55919536 | None:intergenic | 30.0% |
| !! | TCCATAATTTCACTGATTTC+AGG | - | chr1.4:55922967-55922986 | MS.gene94820:CDS | 30.0% |
| !! | TTAGTTGGTTCCAAGTTTTA+TGG | + | chr1.4:55918232-55918251 | None:intergenic | 30.0% |
| !!! | ATCGAAAGTAGTTTTTTACC+TGG | + | chr1.4:55919589-55919608 | None:intergenic | 30.0% |
| !!! | ATGTCAAACTCTTTTGGTTT+TGG | - | chr1.4:55923299-55923318 | MS.gene94820:CDS | 30.0% |
| !!! | GCCATTCTAGTTTTGTTATT+AGG | - | chr1.4:55921615-55921634 | MS.gene94820:intron | 30.0% |
| !!! | TCAACCATGTTTTAAGAGAT+TGG | - | chr1.4:55919952-55919971 | MS.gene94820:intron | 30.0% |
| !!! | TTCATATGGATTTTGACTAG+GGG | - | chr1.4:55920917-55920936 | MS.gene94820:intron | 30.0% |
| AAAATCTATGCAGAGATTCG+TGG | - | chr1.4:55920815-55920834 | MS.gene94820:intron | 35.0% | |
| AAGCTATGCTAGAGAACTTA+CGG | - | chr1.4:55918663-55918682 | MS.gene94820:intron | 35.0% | |
| AATGAGAGCTTTCATCTAAG+AGG | + | chr1.4:55922862-55922881 | None:intergenic | 35.0% | |
| ACAAAACGTTGCTTACATGT+CGG | + | chr1.4:55923057-55923076 | None:intergenic | 35.0% | |
| ACCACGGATATTGATAAACA+TGG | - | chr1.4:55919532-55919551 | MS.gene94820:intron | 35.0% | |
| ACCCTTAGTTTCTTCTGAAT+AGG | + | chr1.4:55922131-55922150 | None:intergenic | 35.0% | |
| ACTCAAGTCCAAATTCTAAG+AGG | - | chr1.4:55921153-55921172 | MS.gene94820:CDS | 35.0% | |
| AGATGAAAGCTCTCATTCAT+GGG | - | chr1.4:55922865-55922884 | MS.gene94820:intron | 35.0% | |
| AGTATTGTGACATTTCCCTT+AGG | - | chr1.4:55919056-55919075 | MS.gene94820:intron | 35.0% | |
| ATCCAGAGTAAGCAAAAAGT+AGG | + | chr1.4:55923340-55923359 | None:intergenic | 35.0% | |
| ATCTGATATGCTTCGGTAAA+TGG | + | chr1.4:55918039-55918058 | None:intergenic | 35.0% | |
| ATGAGAGCTTTCATCTAAGA+GGG | + | chr1.4:55922861-55922880 | None:intergenic | 35.0% | |
| ATTAACACTTAGGGTGTGTT+TGG | + | chr1.4:55922378-55922397 | None:intergenic | 35.0% | |
| ATTGATGGAAAAGACAAAGG+GGG | + | chr1.4:55921403-55921422 | None:intergenic | 35.0% | |
| CATAATTTGAGAGAAGGAGA+TGG | + | chr1.4:55918124-55918143 | None:intergenic | 35.0% | |
| CATTGATGGAAAAGACAAAG+GGG | + | chr1.4:55921404-55921423 | None:intergenic | 35.0% | |
| CCCTCTCATTCTCTATTTAT+TGG | - | chr1.4:55921762-55921781 | MS.gene94820:intron | 35.0% | |
| CCCTGAAATCAGTGAAATTA+TGG | + | chr1.4:55922971-55922990 | None:intergenic | 35.0% | |
| CTCACCAGAATTCTTTATAC+AGG | - | chr1.4:55922678-55922697 | MS.gene94820:intron | 35.0% | |
| GACATTGATGGAAAAGACAA+AGG | + | chr1.4:55921406-55921425 | None:intergenic | 35.0% | |
| GCCAATAAATAGAGAATGAG+AGG | + | chr1.4:55921766-55921785 | None:intergenic | 35.0% | |
| GCTCAAGTTCCTAAACAATA+GGG | + | chr1.4:55920775-55920794 | None:intergenic | 35.0% | |
| GGAAGTCAATTGATCAAATG+TGG | + | chr1.4:55918333-55918352 | None:intergenic | 35.0% | |
| GTGAATTCAACGACGAAATT+TGG | - | chr1.4:55918390-55918409 | MS.gene94820:intron | 35.0% | |
| TAATGCATCAATACTGGACT+CGG | + | chr1.4:55920292-55920311 | None:intergenic | 35.0% | |
| TAATGGAAAATGTGGGGTAA+GGG | - | chr1.4:55918253-55918272 | MS.gene94820:intron | 35.0% | |
| TAGATGAAAGCTCTCATTCA+TGG | - | chr1.4:55922864-55922883 | MS.gene94820:intron | 35.0% | |
| TAGCATAGCTTATGAAGAGA+CGG | + | chr1.4:55918654-55918673 | None:intergenic | 35.0% | |
| TATGCCAAAGTTAGAGTTGA+GGG | + | chr1.4:55921257-55921276 | None:intergenic | 35.0% | |
| TCCAGAGTAAGCAAAAAGTA+GGG | + | chr1.4:55923339-55923358 | None:intergenic | 35.0% | |
| TGCTAATATCTAACCAGTAC+TGG | + | chr1.4:55921947-55921966 | None:intergenic | 35.0% | |
| TGCTCAACTGATATGTGAAA+AGG | - | chr1.4:55919319-55919338 | MS.gene94820:intron | 35.0% | |
| TGCTCAAGTTCCTAAACAAT+AGG | + | chr1.4:55920776-55920795 | None:intergenic | 35.0% | |
| TGGCACTAACATAAAACACA+AGG | + | chr1.4:55920352-55920371 | None:intergenic | 35.0% | |
| TTAATGGAAAATGTGGGGTA+AGG | - | chr1.4:55918252-55918271 | MS.gene94820:intron | 35.0% | |
| TTATGCCAAAGTTAGAGTTG+AGG | + | chr1.4:55921258-55921277 | None:intergenic | 35.0% | |
| TTGTCACCAAATACAGAATC+TGG | + | chr1.4:55923233-55923252 | None:intergenic | 35.0% | |
| TTTCCCTATTCCTGAATACA+GGG | - | chr1.4:55920159-55920178 | MS.gene94820:intron | 35.0% | |
| TTTGTTAGTAGTTGGAAGCT+GGG | + | chr1.4:55921813-55921832 | None:intergenic | 35.0% | |
| ! | AAGAGATTGGTTAGTCAATC+AGG | - | chr1.4:55919965-55919984 | MS.gene94820:intron | 35.0% |
| ! | ACGAATCTCTGCATAGATTT+TGG | + | chr1.4:55920816-55920835 | None:intergenic | 35.0% |
| ! | ACTTTTTGCTTACTCTGGAT+CGG | - | chr1.4:55923340-55923359 | MS.gene94820:CDS | 35.0% |
| ! | AGATTGCTTTCTTTCAAGTC+AGG | + | chr1.4:55918913-55918932 | None:intergenic | 35.0% |
| ! | CTTTTGATGTTCTTATCCCA+GGG | - | chr1.4:55923176-55923195 | MS.gene94820:intron | 35.0% |
| ! | GAGCTCTATCTTATTTCAAG+AGG | + | chr1.4:55919899-55919918 | None:intergenic | 35.0% |
| ! | GTAGCTATGTCAAACTCTTT+TGG | - | chr1.4:55923293-55923312 | MS.gene94820:CDS | 35.0% |
| ! | TCTTTTGATGTTCTTATCCC+AGG | - | chr1.4:55923175-55923194 | MS.gene94820:intron | 35.0% |
| ! | TTTTCCCTATTCCTGAATAC+AGG | - | chr1.4:55920158-55920177 | MS.gene94820:intron | 35.0% |
| ! | TTTTTACTCAGGATAGGTGA+AGG | - | chr1.4:55920636-55920655 | MS.gene94820:intron | 35.0% |
| !! | AATTAGTCACTCTAAGACCA+TGG | - | chr1.4:55918780-55918799 | MS.gene94820:intron | 35.0% |
| !!! | CCCAGTCTTAGTTTTATTTG+TGG | - | chr1.4:55920884-55920903 | MS.gene94820:CDS | 35.0% |
| !!! | GGTCGCTAATTTTTTCTGAT+TGG | + | chr1.4:55919878-55919897 | None:intergenic | 35.0% |
| !!! | TCAAACTCTTTTGGTTTTGG+AGG | - | chr1.4:55923302-55923321 | MS.gene94820:CDS | 35.0% |
| AAAGCTCTCATTCATGGGAA+TGG | - | chr1.4:55922870-55922889 | MS.gene94820:intron | 40.0% | |
| AAGGAGATGGAGTTACTAAC+CGG | + | chr1.4:55918111-55918130 | None:intergenic | 40.0% | |
| ACAAGGCCAGATTCTGTATT+TGG | - | chr1.4:55923224-55923243 | MS.gene94820:intron | 40.0% | |
| ACCCATATTTCATGCTAACG+TGG | + | chr1.4:55919565-55919584 | None:intergenic | 40.0% | |
| AGTCAATCAGGACATATCTC+AGG | - | chr1.4:55919977-55919996 | MS.gene94820:intron | 40.0% | |
| AGTGGTAACCCAGAATTTCT+AGG | - | chr1.4:55921688-55921707 | MS.gene94820:intron | 40.0% | |
| ATTACTCAACCTCCTAGTGA+TGG | - | chr1.4:55920951-55920970 | MS.gene94820:intron | 40.0% | |
| ATTGGACATAGGGAGATTTG+CGG | + | chr1.4:55921716-55921735 | None:intergenic | 40.0% | |
| ATTGTATGTAGGTTTGGGCA+TGG | - | chr1.4:55918184-55918203 | MS.gene94820:intron | 40.0% | |
| ATTTCGTCGTTGAATTCACC+AGG | + | chr1.4:55918389-55918408 | None:intergenic | 40.0% | |
| ATTTGGGGATGCAGATGTTA+TGG | - | chr1.4:55920254-55920273 | MS.gene94820:intron | 40.0% | |
| CAAAGAAGGAGAACAGGAAT+TGG | + | chr1.4:55920719-55920738 | None:intergenic | 40.0% | |
| CATGCTACATCTACACCTTT+AGG | - | chr1.4:55922549-55922568 | MS.gene94820:intron | 40.0% | |
| CCATTGCCATAAGTTCTTAG+AGG | - | chr1.4:55918813-55918832 | MS.gene94820:CDS | 40.0% | |
| CTGTGGCTACTATATAAGCT+TGG | - | chr1.4:55921427-55921446 | MS.gene94820:intron | 40.0% | |
| CTTATGACATGTCCAAAAGC+TGG | + | chr1.4:55918702-55918721 | None:intergenic | 40.0% | |
| GCCACGTTAGCATGAAATAT+GGG | - | chr1.4:55919561-55919580 | MS.gene94820:intron | 40.0% | |
| GCCATGTTTATCAATATCCG+TGG | + | chr1.4:55919536-55919555 | None:intergenic | 40.0% | |
| GTGGTAACCCAGAATTTCTA+GGG | - | chr1.4:55921689-55921708 | MS.gene94820:intron | 40.0% | |
| GTTGTGGAGTCCATAAAACT+TGG | - | chr1.4:55918219-55918238 | MS.gene94820:intron | 40.0% | |
| TAGATTAAGCATACAGGGTC+TGG | + | chr1.4:55923145-55923164 | None:intergenic | 40.0% | |
| TAGCATGAAATATGGGTTCC+AGG | - | chr1.4:55919568-55919587 | MS.gene94820:intron | 40.0% | |
| TATGTGAAAAGGTCAGTTCG+TGG | - | chr1.4:55919330-55919349 | MS.gene94820:intron | 40.0% | |
| TGAGAGCTTTCATCTAAGAG+GGG | + | chr1.4:55922860-55922879 | None:intergenic | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr1.4:55922364-55922383 | None:intergenic | 40.0% | |
| TTAAATTGCTGGAATCCGTG+AGG | + | chr1.4:55922593-55922612 | None:intergenic | 40.0% | |
| TTACTCAACCTCCTAGTGAT+GGG | - | chr1.4:55920952-55920971 | MS.gene94820:intron | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr1.4:55922370-55922389 | None:intergenic | 40.0% | |
| TTATATCCGAAGTGACAGGT+AGG | + | chr1.4:55919927-55919946 | None:intergenic | 40.0% | |
| TTCACCCTCAACTCTAACTT+TGG | - | chr1.4:55921250-55921269 | MS.gene94820:intron | 40.0% | |
| TTCCCTATTCCTGAATACAG+GGG | - | chr1.4:55920160-55920179 | MS.gene94820:intron | 40.0% | |
| TTTCGTCGTTGAATTCACCA+GGG | + | chr1.4:55918388-55918407 | None:intergenic | 40.0% | |
| TTTGGATGGAGGGTTTAGAA+GGG | - | chr1.4:55922154-55922173 | MS.gene94820:intron | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | + | chr1.4:55922360-55922379 | None:intergenic | 40.0% | |
| ! | AAACTAAGGGTGTGTTTGGA+TGG | - | chr1.4:55922140-55922159 | MS.gene94820:intron | 40.0% |
| ! | ACGGAGTGTTTGTTAGTAGT+TGG | + | chr1.4:55921821-55921840 | None:intergenic | 40.0% |
| ! | AGTTCTTTTGTGAAGAGTGG+TGG | + | chr1.4:55921520-55921539 | None:intergenic | 40.0% |
| ! | ATACTGTCATTTGAGTGAGC+TGG | + | chr1.4:55921742-55921761 | None:intergenic | 40.0% |
| ! | CCTCTAAGAACTTATGGCAA+TGG | + | chr1.4:55918816-55918835 | None:intergenic | 40.0% |
| ! | CTCTTTCAAGTAGTCTCCTA+GGG | - | chr1.4:55918734-55918753 | MS.gene94820:intron | 40.0% |
| ! | CTTTTCCATCAATGTCACTG+TGG | - | chr1.4:55921410-55921429 | MS.gene94820:intron | 40.0% |
| ! | GAAGAAACTAAGGGTGTGTT+TGG | - | chr1.4:55922136-55922155 | MS.gene94820:intron | 40.0% |
| ! | GTTCTTTTGTGAAGAGTGGT+GGG | + | chr1.4:55921519-55921538 | None:intergenic | 40.0% |
| ! | GTTTGTTAGTAGTTGGAAGC+TGG | + | chr1.4:55921814-55921833 | None:intergenic | 40.0% |
| ! | TACTGGTTGTGGCAAAAGTT+TGG | + | chr1.4:55921930-55921949 | None:intergenic | 40.0% |
| ! | TCTTTCAAGTAGTCTCCTAG+GGG | - | chr1.4:55918735-55918754 | MS.gene94820:intron | 40.0% |
| !! | ATCTCCTTTGAAGCAGTCAA+TGG | + | chr1.4:55923263-55923282 | None:intergenic | 40.0% |
| !! | ATTAATCAGGGGGTGTCTAT+TGG | - | chr1.4:55919260-55919279 | MS.gene94820:intron | 40.0% |
| !! | CATGACTCGTGCTTTAAAAC+AGG | - | chr1.4:55920992-55921011 | MS.gene94820:intron | 40.0% |
| !! | CTGATTCTGAAGTAGTTTGC+TGG | - | chr1.4:55919360-55919379 | MS.gene94820:intron | 40.0% |
| !! | TATCTAACCAGTACTGGTTG+TGG | + | chr1.4:55921941-55921960 | None:intergenic | 40.0% |
| !!! | CTGTTTTAAAGCACGAGTCA+TGG | + | chr1.4:55920994-55921013 | None:intergenic | 40.0% |
| !!! | TCCCTACTTTTTGCTTACTC+TGG | - | chr1.4:55923335-55923354 | MS.gene94820:CDS | 40.0% |
| AACCGGTGACAACTACTCTT+CGG | + | chr1.4:55918094-55918113 | None:intergenic | 45.0% | |
| AACTAGCAGCTATAGCGTAG+TGG | - | chr1.4:55921561-55921580 | MS.gene94820:intron | 45.0% | |
| ACAACTGCTATGGCTGAAAC+TGG | + | chr1.4:55921659-55921678 | None:intergenic | 45.0% | |
| ACTCTTCGGGAAGAAACAAG+AGG | + | chr1.4:55918080-55918099 | None:intergenic | 45.0% | |
| AGACCTCGATGCTTGAATAG+TGG | + | chr1.4:55921293-55921312 | None:intergenic | 45.0% | |
| AGGCTCGACCTCTTAGAATT+TGG | + | chr1.4:55921164-55921183 | None:intergenic | 45.0% | |
| AGTAGCCACAGTGACATTGA+TGG | + | chr1.4:55921418-55921437 | None:intergenic | 45.0% | |
| AGTTAATGGAGCGATTCCCT+GGG | + | chr1.4:55923195-55923214 | None:intergenic | 45.0% | |
| ATCTACTAGCATAGTCCCCT+AGG | + | chr1.4:55918753-55918772 | None:intergenic | 45.0% | |
| ATGCAGAGATTCGTGGCTAT+GGG | - | chr1.4:55920822-55920841 | MS.gene94820:intron | 45.0% | |
| CAATCAGGACATATCTCAGG+TGG | - | chr1.4:55919980-55919999 | MS.gene94820:intron | 45.0% | |
| CCATCTCGACCACTATCAAA+GGG | + | chr1.4:55920489-55920508 | None:intergenic | 45.0% | |
| CTAAAGAAGACGAGCTAGCA+TGG | + | chr1.4:55922746-55922765 | None:intergenic | 45.0% | |
| CTTAGGGTGTGTTTGGATTG+AGG | + | chr1.4:55922371-55922390 | None:intergenic | 45.0% | |
| CTTGAGCATGCTAAAAACCG+AGG | - | chr1.4:55920788-55920807 | MS.gene94820:intron | 45.0% | |
| GAAGGAGAACAGGAATTGGA+AGG | + | chr1.4:55920715-55920734 | None:intergenic | 45.0% | |
| GAGAGCTTTCATCTAAGAGG+GGG | + | chr1.4:55922859-55922878 | None:intergenic | 45.0% | |
| GATCTGCTTCACTTGCCTAA+AGG | + | chr1.4:55922567-55922586 | None:intergenic | 45.0% | |
| GATGCAGATGTTATGGTGAC+TGG | - | chr1.4:55920261-55920280 | MS.gene94820:intron | 45.0% | |
| GCAGGAACACAAGGAAAGAA+CGG | - | chr1.4:55919164-55919183 | MS.gene94820:intron | 45.0% | |
| GCTACTGGGTCACATTCTAT+TGG | - | chr1.4:55920210-55920229 | MS.gene94820:intron | 45.0% | |
| GCTAGCATGGTCAGAGAATA+TGG | + | chr1.4:55922733-55922752 | None:intergenic | 45.0% | |
| GGCCACGTTAGCATGAAATA+TGG | - | chr1.4:55919560-55919579 | MS.gene94820:intron | 45.0% | |
| GTTTGGATGGAGGGTTTAGA+AGG | - | chr1.4:55922153-55922172 | MS.gene94820:intron | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | + | chr1.4:55922361-55922380 | None:intergenic | 45.0% | |
| TAAGCTTGGCTATTTGGCGA+TGG | - | chr1.4:55921441-55921460 | MS.gene94820:intron | 45.0% | |
| TAATGAGCTCCTGTAGTTGC+TGG | - | chr1.4:55919634-55919653 | MS.gene94820:intron | 45.0% | |
| TACTGCCACTACAACTGCTA+TGG | + | chr1.4:55921669-55921688 | None:intergenic | 45.0% | |
| TATGCAGAGATTCGTGGCTA+TGG | - | chr1.4:55920821-55920840 | MS.gene94820:intron | 45.0% | |
| TCACGGATCGATGTTCCTAA+GGG | + | chr1.4:55919074-55919093 | None:intergenic | 45.0% | |
| TCCATCTCGACCACTATCAA+AGG | + | chr1.4:55920490-55920509 | None:intergenic | 45.0% | |
| TGAGTCTAACTCAACCCCAA+AGG | + | chr1.4:55921138-55921157 | None:intergenic | 45.0% | |
| TGATGTCAAGTCGTCAACCA+GGG | + | chr1.4:55921344-55921363 | None:intergenic | 45.0% | |
| TTATGGACTCCACAACCAAG+AGG | + | chr1.4:55918215-55918234 | None:intergenic | 45.0% | |
| TTCAGCCATAGCAGTTGTAG+TGG | - | chr1.4:55921661-55921680 | MS.gene94820:intron | 45.0% | |
| TTGCGGACCCTAGAAATTCT+GGG | + | chr1.4:55921699-55921718 | None:intergenic | 45.0% | |
| TTGGATGGAGGGTTTAGAAG+GGG | - | chr1.4:55922155-55922174 | MS.gene94820:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | chr1.4:55922359-55922378 | None:intergenic | 45.0% | |
| TTTGCGGACCCTAGAAATTC+TGG | + | chr1.4:55921700-55921719 | None:intergenic | 45.0% | |
| ! | ACTTTTGCCACAACCAGTAC+TGG | - | chr1.4:55921931-55921950 | MS.gene94820:intron | 45.0% |
| ! | ATGATTTGGCCCCTGTATTC+AGG | + | chr1.4:55920172-55920191 | None:intergenic | 45.0% |
| ! | CATGCCATTGACTGCTTCAA+AGG | - | chr1.4:55923256-55923275 | MS.gene94820:CDS | 45.0% |
| ! | GCTCTTTCAAGTAGTCTCCT+AGG | - | chr1.4:55918733-55918752 | MS.gene94820:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr1.4:55922144-55922163 | MS.gene94820:intron | 45.0% |
| ! | TAATTGGTTTCCCACTGAGC+AGG | - | chr1.4:55919146-55919165 | MS.gene94820:intron | 45.0% |
| ! | TCATTTTGTGTGCGAGTCAC+GGG | - | chr1.4:55923076-55923095 | MS.gene94820:CDS | 45.0% |
| ! | TCTTACCTTGGTGGATGAGA+AGG | + | chr1.4:55922769-55922788 | None:intergenic | 45.0% |
| ! | TGACCACTATTCAAGCATCG+AGG | - | chr1.4:55921287-55921306 | MS.gene94820:intron | 45.0% |
| ! | TTTAGCCTTCTCATCCACCA+AGG | - | chr1.4:55922761-55922780 | MS.gene94820:intron | 45.0% |
| !! | ACTATTCAAGCATCGAGGTC+TGG | - | chr1.4:55921292-55921311 | MS.gene94820:intron | 45.0% |
| !! | GAATTCACCAGGGTTAGTTC+CGG | + | chr1.4:55918378-55918397 | None:intergenic | 45.0% |
| !! | GTCATTTTGTGTGCGAGTCA+CGG | - | chr1.4:55923075-55923094 | MS.gene94820:CDS | 45.0% |
| !!! | CTGCATAGATTTTGGCTCCT+CGG | + | chr1.4:55920808-55920827 | None:intergenic | 45.0% |
| !!! | TTTTGTGAAGAGTGGTGGGT+GGG | + | chr1.4:55921515-55921534 | None:intergenic | 45.0% |
| ACCGGTGACAACTACTCTTC+GGG | + | chr1.4:55918093-55918112 | None:intergenic | 50.0% | |
| AGCAGTTGTAGTGGCAGTAG+TGG | - | chr1.4:55921670-55921689 | MS.gene94820:intron | 50.0% | |
| AGGAACAAGCGCAGCAACTT+TGG | + | chr1.4:55918354-55918373 | None:intergenic | 50.0% | |
| AGGAACATCGATCCGTGACA+AGG | - | chr1.4:55919076-55919095 | MS.gene94820:intron | 50.0% | |
| ATCCGAAGTGACAGGTAGGA+AGG | + | chr1.4:55919923-55919942 | None:intergenic | 50.0% | |
| ATGGAGGGTTTAGAAGGGGA+AGG | - | chr1.4:55922159-55922178 | MS.gene94820:intron | 50.0% | |
| ATGGTGACACCTCTTGGTTG+TGG | - | chr1.4:55918203-55918222 | MS.gene94820:intron | 50.0% | |
| ATTCGTGGCTATGGGATGTC+AGG | - | chr1.4:55920830-55920849 | MS.gene94820:intron | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | + | chr1.4:55922355-55922374 | None:intergenic | 50.0% | |
| ATTGCTGGAATCCGTGAGGA+TGG | + | chr1.4:55922589-55922608 | None:intergenic | 50.0% | |
| ATTTGAGTGAGCTGGCGCAT+TGG | + | chr1.4:55921734-55921753 | None:intergenic | 50.0% | |
| CTCAGGATAGGTGAAGGTTC+TGG | - | chr1.4:55920642-55920661 | MS.gene94820:intron | 50.0% | |
| CTCATCCACCAAGGTAAGAG+TGG | - | chr1.4:55922770-55922789 | MS.gene94820:intron | 50.0% | |
| CTTCGGGAAGAAACAAGAGG+AGG | + | chr1.4:55918077-55918096 | None:intergenic | 50.0% | |
| GAAGAAACAAGAGGAGGAGG+TGG | + | chr1.4:55918071-55918090 | None:intergenic | 50.0% | |
| GACGACTTGACATCACCCAA+AGG | - | chr1.4:55921349-55921368 | MS.gene94820:intron | 50.0% | |
| GAGTTAATGGAGCGATTCCC+TGG | + | chr1.4:55923196-55923215 | None:intergenic | 50.0% | |
| GCAGATGTTATGGTGACTGG+AGG | - | chr1.4:55920264-55920283 | MS.gene94820:intron | 50.0% | |
| GCAGTGACTGCAGCATGATT+TGG | + | chr1.4:55920186-55920205 | None:intergenic | 50.0% | |
| GCTTGCAACCACTCTTACCT+TGG | + | chr1.4:55922781-55922800 | None:intergenic | 50.0% | |
| GGAAAAGACAAAGGGGGAGA+TGG | + | chr1.4:55921397-55921416 | None:intergenic | 50.0% | |
| GGCCCCTGTATTCAGGAATA+GGG | + | chr1.4:55920165-55920184 | None:intergenic | 50.0% | |
| GTCACGGATCGATGTTCCTA+AGG | + | chr1.4:55919075-55919094 | None:intergenic | 50.0% | |
| GTGAAGCAGATCCATCCTCA+CGG | - | chr1.4:55922575-55922594 | MS.gene94820:intron | 50.0% | |
| GTGATGTCAAGTCGTCAACC+AGG | + | chr1.4:55921345-55921364 | None:intergenic | 50.0% | |
| TAATGGAAGCTTGTCCACCC+TGG | - | chr1.4:55921324-55921343 | MS.gene94820:intron | 50.0% | |
| TCCCGAAGAGTAGTTGTCAC+CGG | - | chr1.4:55918089-55918108 | MS.gene94820:CDS | 50.0% | |
| TCCTTGTGTTCCTGCTCAGT+GGG | + | chr1.4:55919159-55919178 | None:intergenic | 50.0% | |
| TGCAACCACTCTTACCTTGG+TGG | + | chr1.4:55922778-55922797 | None:intergenic | 50.0% | |
| TGGAGGGTTTAGAAGGGGAA+GGG | - | chr1.4:55922160-55922179 | MS.gene94820:intron | 50.0% | |
| TGGCCCCTGTATTCAGGAAT+AGG | + | chr1.4:55920166-55920185 | None:intergenic | 50.0% | |
| TTCCTTGTGTTCCTGCTCAG+TGG | + | chr1.4:55919160-55919179 | None:intergenic | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | + | chr1.4:55922354-55922373 | None:intergenic | 50.0% | |
| ! | AACCCCAAAGGCTAGCTCAT+GGG | + | chr1.4:55921126-55921145 | None:intergenic | 50.0% |
| ! | CAGTCACTGCTTGTGCTACT+GGG | - | chr1.4:55920196-55920215 | MS.gene94820:intron | 50.0% |
| ! | CATTTTGTGTGCGAGTCACG+GGG | - | chr1.4:55923077-55923096 | MS.gene94820:CDS | 50.0% |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | - | chr1.4:55922143-55922162 | MS.gene94820:intron | 50.0% |
| ! | CTCCTTCCTACCTGTCACTT+CGG | - | chr1.4:55919918-55919937 | MS.gene94820:intron | 50.0% |
| ! | GGAACATCGCGAAGGGTTTT+GGG | - | chr1.4:55918011-55918030 | MS.gene94820:CDS | 50.0% |
| !! | AATCAGGGGGTGTCTATTGG+TGG | - | chr1.4:55919263-55919282 | MS.gene94820:intron | 50.0% |
| !! | AGGTCTGGCGGTTTTGGTAA+TGG | - | chr1.4:55921307-55921326 | MS.gene94820:intron | 50.0% |
| !! | AGGTGAAGGTTCTGGAGTCT+TGG | - | chr1.4:55920650-55920669 | MS.gene94820:intron | 50.0% |
| !! | AGGTTCTGGAGTCTTGGTCT+TGG | - | chr1.4:55920656-55920675 | MS.gene94820:intron | 50.0% |
| !! | ATCAGGGGGTGTCTATTGGT+GGG | - | chr1.4:55919264-55919283 | MS.gene94820:intron | 50.0% |
| !! | ATTCAAGCATCGAGGTCTGG+CGG | - | chr1.4:55921295-55921314 | MS.gene94820:intron | 50.0% |
| !! | CACTGATTTCAGGGGGCTAT+TGG | - | chr1.4:55922977-55922996 | MS.gene94820:CDS | 50.0% |
| !! | CCCTTTGATAGTGGTCGAGA+TGG | - | chr1.4:55920486-55920505 | MS.gene94820:intron | 50.0% |
| !! | CTTTTGTGAAGAGTGGTGGG+TGG | + | chr1.4:55921516-55921535 | None:intergenic | 50.0% |
| !! | TTCTGGAGTCTTGGTCTTGG+AGG | - | chr1.4:55920659-55920678 | MS.gene94820:intron | 50.0% |
| AGCACGAGTCATGGCCAGAA+TGG | + | chr1.4:55920985-55921004 | None:intergenic | 55.0% | |
| AGCTCCTGTAGTTGCTGGAC+AGG | - | chr1.4:55919639-55919658 | MS.gene94820:intron | 55.0% | |
| AGGGCAAGAGCTAAGGCTTG+AGG | + | chr1.4:55921184-55921203 | None:intergenic | 55.0% | |
| AGGGTTTAGAAGGGGAAGGG+AGG | - | chr1.4:55922163-55922182 | MS.gene94820:intron | 55.0% | |
| ATGGCACCTCTCCCATCACT+AGG | + | chr1.4:55920966-55920985 | None:intergenic | 55.0% | |
| CGACGAAGACGCTGCATACA+GGG | + | chr1.4:55919494-55919513 | None:intergenic | 55.0% | |
| CGCTGCATACAGGGGAGAAT+AGG | + | chr1.4:55919485-55919504 | None:intergenic | 55.0% | |
| CGGGAAGAAACAAGAGGAGG+AGG | + | chr1.4:55918074-55918093 | None:intergenic | 55.0% | |
| GACGAAGACGCTGCATACAG+GGG | + | chr1.4:55919493-55919512 | None:intergenic | 55.0% | |
| GAGCTGGCGCATTGGACATA+GGG | + | chr1.4:55921726-55921745 | None:intergenic | 55.0% | |
| GCAATGGCAGCTTTGCACCA+TGG | + | chr1.4:55918800-55918819 | None:intergenic | 55.0% | |
| GCAGTCACTGCTTGTGCTAC+TGG | - | chr1.4:55920195-55920214 | MS.gene94820:intron | 55.0% | |
| GGGGCTATTGGTCATCTCCT+TGG | - | chr1.4:55922989-55923008 | MS.gene94820:CDS | 55.0% | |
| GGGTTTAGAAGGGGAAGGGA+GGG | - | chr1.4:55922164-55922183 | MS.gene94820:intron | 55.0% | |
| GGTTTAGAAGGGGAAGGGAG+GGG | - | chr1.4:55922165-55922184 | MS.gene94820:intron | 55.0% | |
| GTGTCTATTGGTGGGGGAAC+TGG | - | chr1.4:55919272-55919291 | MS.gene94820:intron | 55.0% | |
| GTTCCTACCGGAACTAACCC+TGG | - | chr1.4:55918368-55918387 | MS.gene94820:intron | 55.0% | |
| GTTGCCTGTCCAGCAACTAC+AGG | + | chr1.4:55919646-55919665 | None:intergenic | 55.0% | |
| GTTGCTGCGCTTGTTCCTAC+CGG | - | chr1.4:55918356-55918375 | MS.gene94820:intron | 55.0% | |
| TCCCACTGAGCAGGAACACA+AGG | - | chr1.4:55919155-55919174 | MS.gene94820:intron | 55.0% | |
| TGAGCTGGCGCATTGGACAT+AGG | + | chr1.4:55921727-55921746 | None:intergenic | 55.0% | |
| TGTCAAGTCGTCAACCAGGG+TGG | + | chr1.4:55921341-55921360 | None:intergenic | 55.0% | |
| TTGGGAGAGGGCAAGAGCTA+AGG | + | chr1.4:55921191-55921210 | None:intergenic | 55.0% | |
| TTGGGCATGGTGACACCTCT+TGG | - | chr1.4:55918197-55918216 | MS.gene94820:intron | 55.0% | |
| ! | AAAGGCTAGCTCATGGGGTG+AGG | + | chr1.4:55921120-55921139 | None:intergenic | 55.0% |
| ! | AAGGCTAGCTCATGGGGTGA+GGG | + | chr1.4:55921119-55921138 | None:intergenic | 55.0% |
| ! | ACCCCAAAGGCTAGCTCATG+GGG | + | chr1.4:55921125-55921144 | None:intergenic | 55.0% |
| ! | CAACCCCAAAGGCTAGCTCA+TGG | + | chr1.4:55921127-55921146 | None:intergenic | 55.0% |
| ! | CAACCTCCTAGTGATGGGAG+AGG | - | chr1.4:55920957-55920976 | MS.gene94820:intron | 55.0% |
| ! | CGGAACATCGCGAAGGGTTT+TGG | - | chr1.4:55918010-55918029 | MS.gene94820:CDS | 55.0% |
| !! | ACCCCATGAGCTAGCCTTTG+GGG | - | chr1.4:55921121-55921140 | MS.gene94820:CDS | 55.0% |
| !! | CACCCCATGAGCTAGCCTTT+GGG | - | chr1.4:55921120-55921139 | MS.gene94820:CDS | 55.0% |
| !! | TCACCAGGGTTAGTTCCGGT+AGG | + | chr1.4:55918374-55918393 | None:intergenic | 55.0% |
| !! | TCACCCCATGAGCTAGCCTT+TGG | - | chr1.4:55921119-55921138 | MS.gene94820:CDS | 55.0% |
| !! | TCAGGGGGTGTCTATTGGTG+GGG | - | chr1.4:55919265-55919284 | MS.gene94820:intron | 55.0% |
| !! | TGATGGGAGAGGTGCCATTC+TGG | - | chr1.4:55920968-55920987 | MS.gene94820:intron | 55.0% |
| AAGGGCCGCGATGCTTCTTG+CGG | + | chr1.4:55920471-55920490 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr1.4:55922351-55922370 | None:intergenic | 60.0% | |
| CAACAGCTCCAGCAGCACCA+AGG | + | chr1.4:55923009-55923028 | None:intergenic | 60.0% | |
| GCACCTCTCCCATCACTAGG+AGG | + | chr1.4:55920963-55920982 | None:intergenic | 60.0% | |
| GCATCGCGGCCCTTTGATAG+TGG | - | chr1.4:55920477-55920496 | MS.gene94820:intron | 60.0% | |
| GCGACGAAGACGCTGCATAC+AGG | + | chr1.4:55919495-55919514 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr1.4:55922350-55922369 | None:intergenic | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr1.4:55922349-55922368 | None:intergenic | 60.0% | |
| TAGAAGGGGAAGGGAGGGGA+GGG | - | chr1.4:55922169-55922188 | MS.gene94820:intron | 60.0% | |
| TTAGAAGGGGAAGGGAGGGG+AGG | - | chr1.4:55922168-55922187 | MS.gene94820:intron | 60.0% | |
| ! | GCATCGAGGTCTGGCGGTTT+TGG | - | chr1.4:55921301-55921320 | MS.gene94820:intron | 60.0% |
| !! | CAAGCCCGCAAGAAGCATCG+CGG | - | chr1.4:55920463-55920482 | MS.gene94820:intron | 60.0% |
| !! | CAGGGGGTGTCTATTGGTGG+GGG | - | chr1.4:55919266-55919285 | MS.gene94820:intron | 60.0% |
| !! | GGTAAGGGCACTGCGTTTGG+AGG | - | chr1.4:55918268-55918287 | MS.gene94820:intron | 60.0% |
| !! | GGTCATCTCCTTGGTGCTGC+TGG | - | chr1.4:55922998-55923017 | MS.gene94820:CDS | 60.0% |
| !! | TGGGGTAAGGGCACTGCGTT+TGG | - | chr1.4:55918265-55918284 | MS.gene94820:intron | 60.0% |
| AGGGCCGCGATGCTTCTTGC+GGG | + | chr1.4:55920470-55920489 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr1.4:55922346-55922365 | None:intergenic | 65.0% | |
| ! | GCGTGGCGGAACATCGCGAA+GGG | - | chr1.4:55918004-55918023 | MS.gene94820:CDS | 65.0% |
| ! | TGCGTGGCGGAACATCGCGA+AGG | - | chr1.4:55918003-55918022 | MS.gene94820:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 55917996 | 55923367 | 55917996 | ID=MS.gene94820 |
| chr1.4 | mRNA | 55917996 | 55923367 | 55917996 | ID=MS.gene94820.t1;Parent=MS.gene94820 |
| chr1.4 | exon | 55923253 | 55923367 | 55923253 | ID=MS.gene94820.t1.exon1;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55923253 | 55923367 | 55923253 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55922939 | 55923168 | 55922939 | ID=MS.gene94820.t1.exon2;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55922939 | 55923168 | 55922939 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55922178 | 55922285 | 55922178 | ID=MS.gene94820.t1.exon3;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55922178 | 55922285 | 55922178 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55922023 | 55922094 | 55922023 | ID=MS.gene94820.t1.exon4;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55922023 | 55922094 | 55922023 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55921774 | 55921860 | 55921774 | ID=MS.gene94820.t1.exon5;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55921774 | 55921860 | 55921774 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55921032 | 55921183 | 55921032 | ID=MS.gene94820.t1.exon6;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55921032 | 55921183 | 55921032 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55920849 | 55920929 | 55920849 | ID=MS.gene94820.t1.exon7;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55920849 | 55920929 | 55920849 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55920683 | 55920716 | 55920683 | ID=MS.gene94820.t1.exon8;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55920683 | 55920716 | 55920683 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55920512 | 55920578 | 55920512 | ID=MS.gene94820.t1.exon9;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55920512 | 55920578 | 55920512 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55920350 | 55920426 | 55920350 | ID=MS.gene94820.t1.exon10;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55920350 | 55920426 | 55920350 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55918793 | 55918853 | 55918793 | ID=MS.gene94820.t1.exon11;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55918793 | 55918853 | 55918793 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55918581 | 55918663 | 55918581 | ID=MS.gene94820.t1.exon12;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55918581 | 55918663 | 55918581 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55918303 | 55918374 | 55918303 | ID=MS.gene94820.t1.exon13;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55918303 | 55918374 | 55918303 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| chr1.4 | exon | 55917996 | 55918166 | 55917996 | ID=MS.gene94820.t1.exon14;Parent=MS.gene94820.t1 |
| chr1.4 | CDS | 55917996 | 55918166 | 55917996 | ID=cds.MS.gene94820.t1;Parent=MS.gene94820.t1 |
| Gene Sequence |
| Protein sequence |
