Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023427.t1 | XP_013446579.1 | 98.7 | 469 | 6 | 0 | 1 | 469 | 1 | 469 | 2.10E-214 | 755 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023427.t1 | Q9BQ67 | 41.0 | 432 | 227 | 8 | 31 | 454 | 29 | 440 | 9.6e-67 | 255.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023427.t1 | A0A072TTT6 | 98.7 | 469 | 6 | 0 | 1 | 469 | 1 | 469 | 1.5e-214 | 755.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene53345 | MS.gene023427 | PPI |
MS.gene023427 | MS.gene07852 | PPI |
MS.gene023427 | MS.gene052717 | PPI |
MS.gene023427 | MS.gene24284 | PPI |
MS.gene023427 | MS.gene27317 | PPI |
MS.gene053297 | MS.gene023427 | PPI |
MS.gene26959 | MS.gene023427 | PPI |
MS.gene011268 | MS.gene023427 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023427.t1 | MTR_8g080700 | 98.934 | 469 | 5 | 0 | 1 | 469 | 1 | 469 | 0.0 | 960 |
MS.gene023427.t1 | MTR_5g024090 | 77.802 | 464 | 90 | 7 | 1 | 460 | 1 | 455 | 0.0 | 689 |
MS.gene023427.t1 | MTR_4g096880 | 29.262 | 393 | 214 | 12 | 52 | 428 | 29 | 373 | 2.95e-34 | 133 |
MS.gene023427.t1 | MTR_2g039250 | 30.218 | 321 | 182 | 10 | 155 | 450 | 151 | 454 | 1.06e-31 | 127 |
MS.gene023427.t1 | MTR_4g073080 | 30.100 | 299 | 174 | 9 | 157 | 450 | 109 | 377 | 9.08e-29 | 117 |
MS.gene023427.t1 | MTR_2g100090 | 27.246 | 334 | 185 | 12 | 155 | 450 | 110 | 423 | 1.82e-25 | 109 |
MS.gene023427.t1 | MTR_2g016160 | 25.974 | 231 | 144 | 8 | 216 | 432 | 99 | 316 | 3.33e-16 | 79.7 |
MS.gene023427.t1 | MTR_1g054300 | 33.766 | 154 | 91 | 6 | 236 | 389 | 339 | 481 | 1.85e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023427.t1 | AT2G19540 | 70.089 | 448 | 130 | 3 | 23 | 467 | 20 | 466 | 0.0 | 640 |
MS.gene023427.t1 | AT5G58230 | 28.894 | 398 | 209 | 11 | 52 | 428 | 29 | 373 | 3.11e-36 | 139 |
MS.gene023427.t1 | AT2G16780 | 29.114 | 316 | 191 | 8 | 146 | 450 | 92 | 385 | 7.21e-34 | 132 |
MS.gene023427.t1 | AT4G35050 | 29.114 | 316 | 191 | 9 | 146 | 450 | 93 | 386 | 3.90e-32 | 127 |
MS.gene023427.t1 | AT2G19520 | 28.440 | 327 | 183 | 10 | 155 | 450 | 157 | 463 | 1.31e-27 | 115 |
MS.gene023427.t1 | AT4G29730 | 27.950 | 322 | 181 | 10 | 155 | 445 | 137 | 438 | 1.22e-26 | 112 |
MS.gene023427.t1 | AT4G29730 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 6.15e-25 | 107 |
MS.gene023427.t1 | AT4G29730 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 6.15e-25 | 107 |
MS.gene023427.t1 | AT1G29260 | 28.108 | 185 | 114 | 6 | 216 | 394 | 98 | 269 | 1.25e-14 | 75.1 |
MS.gene023427.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 141 | 321 | 3.41e-12 | 68.2 |
MS.gene023427.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 3.66e-12 | 68.2 |
MS.gene023427.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 4.15e-12 | 67.8 |
MS.gene023427.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 84 | 264 | 5.13e-12 | 67.4 |
Find 122 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAAGTATCCAATATTTC+TGG | 0.186014 | 4.2:+14052066 | MS.gene023427:CDS |
CAGGAGCGTTTACTTGTTCT+TGG | 0.192683 | 4.2:-14055508 | None:intergenic |
CAGAATATGGGACCTTTCTT+TGG | 0.220480 | 4.2:+14055445 | MS.gene023427:intron |
ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 4.2:+14051002 | MS.gene023427:CDS |
AAATCTTCTTGGAATTCTAT+TGG | 0.257950 | 4.2:+14052039 | MS.gene023427:CDS |
CTGCCCAAGATGCACATATA+TGG | 0.270395 | 4.2:-14052373 | None:intergenic |
TGGATAAAAGCATTGCAATA+TGG | 0.287928 | 4.2:+14054388 | MS.gene023427:CDS |
CACACAGTGTATTTCATTAC+AGG | 0.300493 | 4.2:+14051624 | MS.gene023427:CDS |
TGTGTGCCAATGCAGTTCTT+TGG | 0.305295 | 4.2:-14055912 | None:intergenic |
TGCAATATGGGATACTCGTT+TGG | 0.310651 | 4.2:+14054401 | MS.gene023427:CDS |
GTGTGCCAATGCAGTTCTTT+GGG | 0.311930 | 4.2:-14055911 | None:intergenic |
AATCTTCTTGGAATTCTATT+GGG | 0.321921 | 4.2:+14052040 | MS.gene023427:CDS |
GGCGGCGGCGCCACAGGTTC+CGG | 0.327760 | 4.2:+14050889 | MS.gene023427:CDS |
CTGTCAGTATGTCCAGTAAA+AGG | 0.330541 | 4.2:-14054184 | None:intergenic |
GACATGAGCTCTCATCTTAA+TGG | 0.333584 | 4.2:+14053859 | MS.gene023427:CDS |
AGTTGGGGAGGCAGATCTTC+AGG | 0.338811 | 4.2:-14055527 | None:intergenic |
GACTGGAGTCCTCTTGTTCC+AGG | 0.347996 | 4.2:+14053976 | MS.gene023427:CDS |
GCAATATGGGATACTCGTTT+GGG | 0.354043 | 4.2:+14054402 | MS.gene023427:CDS |
TGCCGGTGGTCCTACTTTGC+AGG | 0.355683 | 4.2:+14052191 | MS.gene023427:CDS |
ACGTCTCTTCCCAGAAATAT+TGG | 0.357236 | 4.2:-14052076 | None:intergenic |
TTCGGCGGCGGCGGCGCCAC+AGG | 0.362085 | 4.2:+14050883 | MS.gene023427:CDS |
CCAAGGAGTTGATGCAGTTC+AGG | 0.373931 | 4.2:+14053909 | MS.gene023427:CDS |
CATTGGCACACACAGATTCC+TGG | 0.384701 | 4.2:+14055923 | MS.gene023427:CDS |
CCCAGGCTGAGAAATCTTCT+TGG | 0.387294 | 4.2:+14052028 | MS.gene023427:intron |
CTCACGAAGGTTGTATTAAC+CGG | 0.388862 | 4.2:+14052327 | MS.gene023427:CDS |
TGAAACTGATGACTCTGAAA+TGG | 0.392830 | 4.2:+14052116 | MS.gene023427:CDS |
ATCAACTCCTTGGACACCTT+CGG | 0.400128 | 4.2:-14053899 | None:intergenic |
CCTGGTGAATAAACAATAGT+TGG | 0.407860 | 4.2:-14055544 | None:intergenic |
TCGTGATCTCAGACTGCTTA+AGG | 0.409527 | 4.2:+14054626 | MS.gene023427:CDS |
GAGTCATCAGTTTCACGTTT+AGG | 0.409980 | 4.2:-14052108 | None:intergenic |
GGATAAAAGCATTGCAATAT+GGG | 0.421297 | 4.2:+14054389 | MS.gene023427:CDS |
ATGGGACCTTTCTTTGGAAA+AGG | 0.423598 | 4.2:+14055451 | MS.gene023427:CDS |
TGCCCAAGATGCACATATAT+GGG | 0.425064 | 4.2:-14052372 | None:intergenic |
CTGGTGAATAAACAATAGTT+GGG | 0.426771 | 4.2:-14055543 | None:intergenic |
TGTGCATCTTGGGCAGAATC+TGG | 0.430129 | 4.2:+14052380 | MS.gene023427:CDS |
GGCTAGTTGTATGTTGGCGT+CGG | 0.431422 | 4.2:+14054578 | MS.gene023427:CDS |
TCCCCATATATGTGCATCTT+GGG | 0.431645 | 4.2:+14052370 | MS.gene023427:CDS |
AGGAGCGTTTACTTGTTCTT+GGG | 0.432127 | 4.2:-14055507 | None:intergenic |
TTTGTGCCATGGAGCGTATC+CGG | 0.432906 | 4.2:-14052346 | None:intergenic |
TGAATCATCTTCGGCGGCGG+CGG | 0.433527 | 4.2:+14050874 | MS.gene023427:CDS |
GCAGTACATACTATCATTCC+AGG | 0.440018 | 4.2:-14055941 | None:intergenic |
TTAAAGTATCCAATATTTCT+GGG | 0.447355 | 4.2:+14052067 | MS.gene023427:CDS |
TCCACACGAAGCTTCTTCAT+TGG | 0.452856 | 4.2:+14055186 | MS.gene023427:CDS |
ATCCCCATATATGTGCATCT+TGG | 0.460743 | 4.2:+14052369 | MS.gene023427:CDS |
CCTGAACTGCATCAACTCCT+TGG | 0.464940 | 4.2:-14053909 | None:intergenic |
CCAACTATTGTTTATTCACC+AGG | 0.472482 | 4.2:+14055544 | MS.gene023427:CDS |
TGGATGTGATTGGATGCTTA+TGG | 0.478480 | 4.2:-14055153 | None:intergenic |
TTTGGAAAAGGACGAGGAAG+AGG | 0.483191 | 4.2:+14055463 | MS.gene023427:CDS |
GCTAGTTGTATGTTGGCGTC+GGG | 0.490510 | 4.2:+14054579 | MS.gene023427:CDS |
AAGGTGCTTTGAATATTTGA+AGG | 0.491981 | 4.2:-14055989 | None:intergenic |
TTGGCGTCGGGTAGTGATGA+TGG | 0.493276 | 4.2:+14054591 | MS.gene023427:CDS |
ATGAAGGCTATGCTATAGAC+TGG | 0.496426 | 4.2:+14053959 | MS.gene023427:CDS |
CCGGTAAAAGTGTGGCAACC+TGG | 0.501960 | 4.2:+14050908 | MS.gene023427:CDS |
TGAATGTATTGTCATGGAAC+AGG | 0.507712 | 4.2:+14054466 | MS.gene023427:CDS |
AATCCTTTGCCACAGAATAT+GGG | 0.508159 | 4.2:+14055433 | MS.gene023427:intron |
CTCCACTCAATGGATGTGAT+TGG | 0.514101 | 4.2:-14055163 | None:intergenic |
GTTCCAGGGAGGCTTGTATC+CGG | 0.514187 | 4.2:+14053991 | MS.gene023427:CDS |
GGCAGAATCTGGTCATGTGC+AGG | 0.520350 | 4.2:+14052391 | MS.gene023427:CDS |
CCTTTCTTTGGAAAAGGACG+AGG | 0.522730 | 4.2:+14055457 | MS.gene023427:CDS |
TTCTGGGAAGAGACGTGAGC+TGG | 0.529788 | 4.2:+14052083 | MS.gene023427:CDS |
GAAACGGAGTGAATCATCTT+CGG | 0.530490 | 4.2:+14050865 | MS.gene023427:intron |
GACGAAGAAGAAGGTGGTGC+CGG | 0.530693 | 4.2:+14052174 | MS.gene023427:CDS |
CGGCATAAAACATCGTCAAA+AGG | 0.531323 | 4.2:+14050718 | MS.gene023427:CDS |
GATAGTGAAGACGAAGAAGA+AGG | 0.533242 | 4.2:+14052165 | MS.gene023427:CDS |
GAGGGTGTTACCTGCAAAGT+AGG | 0.537218 | 4.2:-14052201 | None:intergenic |
GCAACCTGGTGTGGATAAGT+TGG | 0.537432 | 4.2:+14050922 | MS.gene023427:CDS |
ACAGAAACCGAAGGTGTCCA+AGG | 0.538288 | 4.2:+14053892 | MS.gene023427:CDS |
CAATAATAGTATTTATCTGT+GGG | 0.539902 | 4.2:+14054123 | MS.gene023427:CDS |
TTACCGGATACAAGCCTCCC+TGG | 0.543277 | 4.2:-14053994 | None:intergenic |
AAATTTAAGCACAAAGATGA+AGG | 0.546613 | 4.2:+14053943 | MS.gene023427:CDS |
TTCGTGTGGACTCCACTCAA+TGG | 0.553277 | 4.2:-14055173 | None:intergenic |
GAGTGAATCATCTTCGGCGG+CGG | 0.557113 | 4.2:+14050871 | MS.gene023427:CDS |
GCAATAATAGTATTTATCTG+TGG | 0.558281 | 4.2:+14054122 | MS.gene023427:CDS |
ATAGTATGTACTGCAGCAGA+TGG | 0.561830 | 4.2:+14055950 | MS.gene023427:CDS |
TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 4.2:-14054148 | None:intergenic |
TGGAGAGAATTGTAAGCAGA+AGG | 0.568749 | 4.2:-14050971 | None:intergenic |
ACAAGCCTCCCTGGAACAAG+AGG | 0.572225 | 4.2:-14053985 | None:intergenic |
TGTGCTTGAAAAGACGCAGC+TGG | 0.573745 | 4.2:-14054432 | None:intergenic |
AAGACCCCAAAGAACTGCAT+TGG | 0.573867 | 4.2:+14055906 | MS.gene023427:CDS |
TAGGTTGGCTAGTTGTATGT+TGG | 0.574859 | 4.2:+14054572 | MS.gene023427:intron |
GCCATCCAATATGAAAAGCA+TGG | 0.576629 | 4.2:-14050991 | None:intergenic |
TTTGAATATTTGAAGGCATG+AGG | 0.577378 | 4.2:-14055982 | None:intergenic |
TCTTCCAACTTATCCACACC+AGG | 0.583170 | 4.2:-14050926 | None:intergenic |
TGTGCCAATGCAGTTCTTTG+GGG | 0.585321 | 4.2:-14055910 | None:intergenic |
AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 4.2:+14054146 | MS.gene023427:CDS |
TTCTGTTCGAACTAAACCCA+TGG | 0.588801 | 4.2:-14051595 | None:intergenic |
AAAAGTGTGGCAACCTGGTG+TGG | 0.591077 | 4.2:+14050913 | MS.gene023427:CDS |
GTATTTCATTACAGGGACAC+AGG | 0.601861 | 4.2:+14051632 | MS.gene023427:CDS |
CTGATGTGAATGTATTGTCA+TGG | 0.604527 | 4.2:+14054460 | MS.gene023427:CDS |
TACCTGCAAAGTAGGACCAC+CGG | 0.605560 | 4.2:-14052193 | None:intergenic |
TTACGTAAGTTGATTATCAG+CGG | 0.605575 | 4.2:-14055218 | None:intergenic |
TGGCGTCGGGTAGTGATGAT+GGG | 0.605656 | 4.2:+14054592 | MS.gene023427:CDS |
TATTAACCGGATACGCTCCA+TGG | 0.608736 | 4.2:+14052340 | MS.gene023427:CDS |
ACACAGTGTATTTCATTACA+GGG | 0.609707 | 4.2:+14051625 | MS.gene023427:CDS |
GGAAAAGGACGAGGAAGAGG+AGG | 0.612345 | 4.2:+14055466 | MS.gene023427:CDS |
GAAGAAGAAGGTGGTGCCGG+TGG | 0.612395 | 4.2:+14052177 | MS.gene023427:CDS |
ACTGATGACTCTGAAATGGA+TGG | 0.615606 | 4.2:+14052120 | MS.gene023427:CDS |
CACAGGTTCCGGTAAAAGTG+TGG | 0.622299 | 4.2:+14050900 | MS.gene023427:CDS |
ACTGGAGTCCTCTTGTTCCA+GGG | 0.624385 | 4.2:+14053977 | MS.gene023427:CDS |
GTATTCAAAATGCGCTACCA+CGG | 0.630470 | 4.2:-14055131 | None:intergenic |
TGAATAAACAATAGTTGGGG+AGG | 0.631441 | 4.2:-14055539 | None:intergenic |
AAAGGCAAAGAGCAAGAACA+AGG | 0.634436 | 4.2:+14050736 | MS.gene023427:CDS |
ATCCAATCACATCCATTGAG+TGG | 0.634447 | 4.2:+14055161 | MS.gene023427:CDS |
GGAGTCCTCTTGTTCCAGGG+AGG | 0.636093 | 4.2:+14053980 | MS.gene023427:CDS |
TCATGCAGCTTCTGATGGCA+AGG | 0.636729 | 4.2:-14056008 | None:intergenic |
TGACTCTGAAATGGATGGTG+AGG | 0.638725 | 4.2:+14052125 | MS.gene023427:CDS |
GCCAATGAAGAAGCTTCGTG+TGG | 0.638913 | 4.2:-14055187 | None:intergenic |
TGAATAGGAAGGAGATTCCG+TGG | 0.641695 | 4.2:+14055114 | MS.gene023427:intron |
GTGTATCATGCAGCTTCTGA+TGG | 0.643240 | 4.2:-14056013 | None:intergenic |
TGGTGAGGATAGTGATAGCG+AGG | 0.651927 | 4.2:+14052140 | MS.gene023427:CDS |
GTAATGAAATACACTGTGTG+TGG | 0.652047 | 4.2:-14051621 | None:intergenic |
GCCCAAGATGCACATATATG+GGG | 0.653392 | 4.2:-14052371 | None:intergenic |
TTCACACCTACAGTTGCGGA+AGG | 0.659965 | 4.2:+14052301 | MS.gene023427:intron |
AACTAATTGAAGATGACTCG+CGG | 0.660356 | 4.2:+14050698 | None:intergenic |
TTTGTTCTTTACCTAAGACA+AGG | 0.662595 | 4.2:-14051013 | None:intergenic |
TGGTGAATAAACAATAGTTG+GGG | 0.666731 | 4.2:-14055542 | None:intergenic |
AGTGAAGACGAAGAAGAAGG+TGG | 0.675905 | 4.2:+14052168 | MS.gene023427:CDS |
ACGGAGTGAATCATCTTCGG+CGG | 0.677615 | 4.2:+14050868 | MS.gene023427:CDS |
CAATATGGGATACTCGTTTG+GGG | 0.693736 | 4.2:+14054403 | MS.gene023427:CDS |
TATGGGATACTCGTTTGGGG+AGG | 0.701784 | 4.2:+14054406 | MS.gene023427:CDS |
CTAGCAGAGACAGAAACCGA+AGG | 0.726742 | 4.2:+14053883 | MS.gene023427:CDS |
TTGCGGAAGGTAACTCACGA+AGG | 0.747550 | 4.2:+14052314 | MS.gene023427:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTAAATATATCTAATCA+AGG | - | chr4.2:14055848-14055867 | None:intergenic | 10.0% |
!! | AATAACAAAAACAAAATAGT+CGG | - | chr4.2:14055066-14055085 | None:intergenic | 15.0% |
!! | AATATTATCTATACTAATGT+TGG | - | chr4.2:14053375-14053394 | None:intergenic | 15.0% |
!! | ATTTCAAAGATTAACTTATA+AGG | - | chr4.2:14053275-14053294 | None:intergenic | 15.0% |
!!! | AAGTTCATTATTTTTTGAAT+AGG | + | chr4.2:14055099-14055118 | MS.gene023427:intron | 15.0% |
!!! | ATAAGTTAATCTTTGAAATA+TGG | + | chr4.2:14053276-14053295 | MS.gene023427:intron | 15.0% |
!!! | CAACATATTGAAATTTTTTA+AGG | + | chr4.2:14053679-14053698 | MS.gene023427:intron | 15.0% |
!!! | TCATGATTTATTTTTTGTTT+GGG | + | chr4.2:14051541-14051560 | MS.gene023427:intron | 15.0% |
!!! | TTTTGAAAAAATTGAAGAAA+CGG | + | chr4.2:14050849-14050868 | MS.gene023427:intron | 15.0% |
!! | AAGTAAAAATTCATATGAAG+AGG | - | chr4.2:14052223-14052242 | None:intergenic | 20.0% |
!! | AATCCAAAGTAAGAAAAATA+AGG | - | chr4.2:14055399-14055418 | None:intergenic | 20.0% |
!! | AGTAAAAATTCATATGAAGA+GGG | - | chr4.2:14052222-14052241 | None:intergenic | 20.0% |
!! | ATAAATCCCTGAAATTTATT+AGG | - | chr4.2:14055296-14055315 | None:intergenic | 20.0% |
!! | CAATAATAGTATTTATCTGT+GGG | + | chr4.2:14054123-14054142 | MS.gene023427:CDS | 20.0% |
!! | TAATGATGTAATATGCTATT+AGG | - | chr4.2:14054852-14054871 | None:intergenic | 20.0% |
!! | TATAGTACTAAACAAACTAT+GGG | - | chr4.2:14053302-14053321 | None:intergenic | 20.0% |
!! | TGTGAAACATATGTATAAAA+TGG | + | chr4.2:14053239-14053258 | MS.gene023427:intron | 20.0% |
!! | TTATAGTACTAAACAAACTA+TGG | - | chr4.2:14053303-14053322 | None:intergenic | 20.0% |
!! | TTGAACAAAAATATACAACT+CGG | - | chr4.2:14053806-14053825 | None:intergenic | 20.0% |
!!! | AGAAAGTTTACAATTTTGTA+TGG | - | chr4.2:14054690-14054709 | None:intergenic | 20.0% |
!!! | CATGATTTATTTTTTGTTTG+GGG | + | chr4.2:14051542-14051561 | MS.gene023427:intron | 20.0% |
!!! | GAGTTAATTTTTTTAATCGA+CGG | + | chr4.2:14052482-14052501 | MS.gene023427:intron | 20.0% |
!!! | GTCATGATTTATTTTTTGTT+TGG | + | chr4.2:14051540-14051559 | MS.gene023427:intron | 20.0% |
!!! | TAGAATTTTTTGTCCTTTAA+TGG | + | chr4.2:14051789-14051808 | MS.gene023427:intron | 20.0% |
!!! | TAGTATAGATAATATTTCTG+CGG | + | chr4.2:14053379-14053398 | MS.gene023427:intron | 20.0% |
!!! | TCATTATTTTTTGAATAGGA+AGG | + | chr4.2:14055103-14055122 | MS.gene023427:intron | 20.0% |
!!! | TTAAAGTATCCAATATTTCT+GGG | + | chr4.2:14052067-14052086 | MS.gene023427:CDS | 20.0% |
!!! | TTAAGGTTCTTAAATTTTAG+CGG | + | chr4.2:14053696-14053715 | MS.gene023427:intron | 20.0% |
!!! | TTTAAAGTATCCAATATTTC+TGG | + | chr4.2:14052066-14052085 | MS.gene023427:CDS | 20.0% |
!!! | TTTGTATGGTTTTTCTATAT+GGG | - | chr4.2:14054676-14054695 | None:intergenic | 20.0% |
!!! | TTTTGTATGGTTTTTCTATA+TGG | - | chr4.2:14054677-14054696 | None:intergenic | 20.0% |
! | AAAACTCAAAAGTCCATTAA+AGG | - | chr4.2:14051805-14051824 | None:intergenic | 25.0% |
! | AAATCTTCTTGGAATTCTAT+TGG | + | chr4.2:14052039-14052058 | MS.gene023427:CDS | 25.0% |
! | AAATTTAAGCACAAAGATGA+AGG | + | chr4.2:14053943-14053962 | MS.gene023427:CDS | 25.0% |
! | AAGAATTATGACATTGTGAT+TGG | + | chr4.2:14051341-14051360 | MS.gene023427:intron | 25.0% |
! | AATCATTCAACTGTTAATGT+GGG | - | chr4.2:14052974-14052993 | None:intergenic | 25.0% |
! | AATCTTCTTGGAATTCTATT+GGG | + | chr4.2:14052040-14052059 | MS.gene023427:CDS | 25.0% |
! | AATGAAATACAACAGATATG+AGG | - | chr4.2:14054544-14054563 | None:intergenic | 25.0% |
! | ACGAATTCCTAATAAATTTC+AGG | + | chr4.2:14055286-14055305 | MS.gene023427:intron | 25.0% |
! | ATAATTCAATGTAGTCACTT+GGG | + | chr4.2:14051234-14051253 | MS.gene023427:intron | 25.0% |
! | CATATTTCATACTATGTTAG+TGG | + | chr4.2:14052568-14052587 | MS.gene023427:intron | 25.0% |
! | CGAATTCCTAATAAATTTCA+GGG | + | chr4.2:14055287-14055306 | MS.gene023427:intron | 25.0% |
! | CGTAATAAATTTGTAGATCT+GGG | + | chr4.2:14053837-14053856 | MS.gene023427:intron | 25.0% |
! | GCAATAATAGTATTTATCTG+TGG | + | chr4.2:14054122-14054141 | MS.gene023427:CDS | 25.0% |
! | GTTTCTCTCATATTATCTTT+GGG | + | chr4.2:14055319-14055338 | MS.gene023427:intron | 25.0% |
! | TAAATTTAGCTACATGATTG+TGG | + | chr4.2:14053160-14053179 | MS.gene023427:intron | 25.0% |
! | TAACAGCAAAATTACTGTAT+AGG | + | chr4.2:14054717-14054736 | MS.gene023427:intron | 25.0% |
! | TAATATGCTATTAGGACATA+AGG | - | chr4.2:14054844-14054863 | None:intergenic | 25.0% |
! | TAGAATGTATAAGATTGAAG+TGG | + | chr4.2:14053131-14053150 | MS.gene023427:intron | 25.0% |
! | TCAAAATGACAAAATATGTG+TGG | - | chr4.2:14053087-14053106 | None:intergenic | 25.0% |
! | TCAACTTACGTAAGTAAATA+CGG | + | chr4.2:14055228-14055247 | MS.gene023427:intron | 25.0% |
! | TCATTGTCAAAGTAGATATA+AGG | + | chr4.2:14054067-14054086 | MS.gene023427:intron | 25.0% |
! | TGTTTCTCTCATATTATCTT+TGG | + | chr4.2:14055318-14055337 | MS.gene023427:intron | 25.0% |
! | TTATCTATACTAATGTTGGT+AGG | - | chr4.2:14053371-14053390 | None:intergenic | 25.0% |
!! | AGCTTTTGTATAATGAAAGA+AGG | - | chr4.2:14055787-14055806 | None:intergenic | 25.0% |
!! | ATTGAAAAAACTCCTTTTAC+TGG | + | chr4.2:14054172-14054191 | MS.gene023427:CDS | 25.0% |
!! | TCTTGTGTGTTTTCTTTTAT+AGG | + | chr4.2:14051670-14051689 | MS.gene023427:intron | 25.0% |
!! | TTAAACTATGAGCAACTTTT+TGG | - | chr4.2:14052535-14052554 | None:intergenic | 25.0% |
!! | TTCAAGTTAAAGGAAATAAG+AGG | - | chr4.2:14055875-14055894 | None:intergenic | 25.0% |
!! | TTGTGCTTAAATTTTTGTAG+TGG | - | chr4.2:14053937-14053956 | None:intergenic | 25.0% |
!!! | AATAAAACCCATTATTTTGC+TGG | + | chr4.2:14051068-14051087 | MS.gene023427:intron | 25.0% |
!!! | ATTCTGCTTTTTATTTTCTG+TGG | + | chr4.2:14050805-14050824 | MS.gene023427:intron | 25.0% |
!!! | ATTTCCTTTAACTTGAAACA+GGG | + | chr4.2:14055878-14055897 | MS.gene023427:intron | 25.0% |
!!! | GGACTTTATTGTTTTTGTTA+TGG | + | chr4.2:14053185-14053204 | MS.gene023427:intron | 25.0% |
!!! | TATTTCCTTTAACTTGAAAC+AGG | + | chr4.2:14055877-14055896 | MS.gene023427:intron | 25.0% |
!!! | TTCTGCTTTTTATTTTCTGT+GGG | + | chr4.2:14050806-14050825 | MS.gene023427:intron | 25.0% |
!!! | TTGAACCAAGTTATTTCTAT+TGG | + | chr4.2:14052717-14052736 | MS.gene023427:intron | 25.0% |
!!! | TTTTTCTTGTTTCAATGTTG+TGG | + | chr4.2:14052750-14052769 | MS.gene023427:intron | 25.0% |
AAAATAAGCCCAATGATTAC+CGG | - | chr4.2:14054013-14054032 | None:intergenic | 30.0% | |
AAAGCTAGTAAAACATGACT+AGG | - | chr4.2:14051952-14051971 | None:intergenic | 30.0% | |
AACAAAAACAAAATAGTCGG+CGG | - | chr4.2:14055063-14055082 | None:intergenic | 30.0% | |
AACCTAGCTTATACTCAAAT+AGG | - | chr4.2:14055715-14055734 | None:intergenic | 30.0% | |
AATAAAGTGCGAGATCAAAA+GGG | - | chr4.2:14050788-14050807 | None:intergenic | 30.0% | |
ACACAGTGTATTTCATTACA+GGG | + | chr4.2:14051625-14051644 | MS.gene023427:CDS | 30.0% | |
ACTTCTTTGATAGAAAGAGA+TGG | - | chr4.2:14053763-14053782 | None:intergenic | 30.0% | |
AGGATAAATTATTCTGTTCC+AGG | + | chr4.2:14053468-14053487 | MS.gene023427:intron | 30.0% | |
ATCATTCAACTGTTAATGTG+GGG | - | chr4.2:14052973-14052992 | None:intergenic | 30.0% | |
ATGTTGATCTTCATGTTTGT+AGG | + | chr4.2:14054094-14054113 | MS.gene023427:intron | 30.0% | |
ATGTTGCAATTGCAATACTT+AGG | - | chr4.2:14053533-14053552 | None:intergenic | 30.0% | |
CAATCATTCAACTGTTAATG+TGG | - | chr4.2:14052975-14052994 | None:intergenic | 30.0% | |
CATAATTCAATGTAGTCACT+TGG | + | chr4.2:14051233-14051252 | MS.gene023427:intron | 30.0% | |
CTGATCCAATAGAAATAACT+TGG | - | chr4.2:14052725-14052744 | None:intergenic | 30.0% | |
CTGGTGAATAAACAATAGTT+GGG | - | chr4.2:14055546-14055565 | None:intergenic | 30.0% | |
CTTAGTAGAACATTGTCAAA+GGG | - | chr4.2:14052927-14052946 | None:intergenic | 30.0% | |
GATAACTCCAGCAAAATAAT+GGG | - | chr4.2:14051078-14051097 | None:intergenic | 30.0% | |
GATGCTTTAATTGTCTTATC+TGG | + | chr4.2:14054795-14054814 | MS.gene023427:intron | 30.0% | |
GCGTAATAAATTTGTAGATC+TGG | + | chr4.2:14053836-14053855 | MS.gene023427:intron | 30.0% | |
GCTTTAACCAAACATTTACT+TGG | - | chr4.2:14052449-14052468 | None:intergenic | 30.0% | |
GTAAGAAAAATAAGGCAGTT+TGG | - | chr4.2:14055391-14055410 | None:intergenic | 30.0% | |
GTAGTAAATGAGCCATTATT+TGG | + | chr4.2:14052592-14052611 | MS.gene023427:intron | 30.0% | |
TAGAATGAAAATTGAGTCGA+TGG | - | chr4.2:14054516-14054535 | None:intergenic | 30.0% | |
TCCTTCAAAAATGCATTTCT+GGG | - | chr4.2:14054961-14054980 | None:intergenic | 30.0% | |
TCTTAGTAGAACATTGTCAA+AGG | - | chr4.2:14052928-14052947 | None:intergenic | 30.0% | |
TGATAACTCCAGCAAAATAA+TGG | - | chr4.2:14051079-14051098 | None:intergenic | 30.0% | |
TGGTGAATAAACAATAGTTG+GGG | - | chr4.2:14055545-14055564 | None:intergenic | 30.0% | |
TGTATTTCATTGTACTGAGT+AGG | + | chr4.2:14054553-14054572 | MS.gene023427:intron | 30.0% | |
TGTCATAATTCTTGTGAAAG+AGG | - | chr4.2:14051334-14051353 | None:intergenic | 30.0% | |
TGTTGATCTTCATGTTTGTA+GGG | + | chr4.2:14054095-14054114 | MS.gene023427:intron | 30.0% | |
TTCCTTCAAAAATGCATTTC+TGG | - | chr4.2:14054962-14054981 | None:intergenic | 30.0% | |
TTTCACAATTAATGTCTGCA+TGG | - | chr4.2:14053226-14053245 | None:intergenic | 30.0% | |
TTTGTTCTTTACCTAAGACA+AGG | - | chr4.2:14051016-14051035 | None:intergenic | 30.0% | |
! | AAGGTGCTTTGAATATTTGA+AGG | - | chr4.2:14055992-14056011 | None:intergenic | 30.0% |
! | AGGAACTTTTTATCGGAAAA+TGG | - | chr4.2:14054824-14054843 | None:intergenic | 30.0% |
! | AGTTGATCTTACTGACATTT+TGG | + | chr4.2:14052273-14052292 | MS.gene023427:intron | 30.0% |
! | GGACATAAGGAACTTTTTAT+CGG | - | chr4.2:14054831-14054850 | None:intergenic | 30.0% |
! | TATTGCAATGCTTTTATCCA+CGG | - | chr4.2:14054388-14054407 | None:intergenic | 30.0% |
! | TGACATAGAATTGGTAACAT+TGG | - | chr4.2:14051367-14051386 | None:intergenic | 30.0% |
! | TTTGAATATTTGAAGGCATG+AGG | - | chr4.2:14055985-14056004 | None:intergenic | 30.0% |
!! | AGTATCTCGTTTGATTTGAT+AGG | + | chr4.2:14053448-14053467 | MS.gene023427:intron | 30.0% |
!! | AGTTATTTCTATTGGATCAG+AGG | + | chr4.2:14052725-14052744 | MS.gene023427:intron | 30.0% |
!! | GGATAAAAGCATTGCAATAT+GGG | + | chr4.2:14054389-14054408 | MS.gene023427:CDS | 30.0% |
!! | GTAACGGAAAAGTTGATATT+GGG | + | chr4.2:14051746-14051765 | MS.gene023427:intron | 30.0% |
!! | GTTATTTCTATTGGATCAGA+GGG | + | chr4.2:14052726-14052745 | MS.gene023427:intron | 30.0% |
!! | TGGATAAAAGCATTGCAATA+TGG | + | chr4.2:14054388-14054407 | MS.gene023427:CDS | 30.0% |
!! | TTACGTAAGTTGATTATCAG+CGG | - | chr4.2:14055221-14055240 | None:intergenic | 30.0% |
!!! | AGTTTTAAAAACCCTATGAC+TGG | + | chr4.2:14052416-14052435 | MS.gene023427:intron | 30.0% |
!!! | CTGCCTTATTTTTCTTACTT+TGG | + | chr4.2:14055393-14055412 | MS.gene023427:intron | 30.0% |
!!! | GAATGTTGTTATTTTGCCAT+GGG | + | chr4.2:14052868-14052887 | MS.gene023427:intron | 30.0% |
!!! | TGAATGTTGTTATTTTGCCA+TGG | + | chr4.2:14052867-14052886 | MS.gene023427:intron | 30.0% |
AAAGTGAGTATTTGAGAGCT+TGG | + | chr4.2:14053008-14053027 | MS.gene023427:intron | 35.0% | |
AAGCAAACGCACAAAAATTG+TGG | - | chr4.2:14051488-14051507 | None:intergenic | 35.0% | |
AATCCTTTGCCACAGAATAT+GGG | + | chr4.2:14055433-14055452 | MS.gene023427:intron | 35.0% | |
ACACTGAAATGTTCCGAAAA+AGG | - | chr4.2:14054251-14054270 | None:intergenic | 35.0% | |
ACCAAACATTTACTTGGCTA+AGG | - | chr4.2:14052443-14052462 | None:intergenic | 35.0% | |
ACTGTTCATTACCGATCAAA+TGG | + | chr4.2:14051722-14051741 | MS.gene023427:intron | 35.0% | |
AGCCTATTTGAGTATAAGCT+AGG | + | chr4.2:14055710-14055729 | MS.gene023427:intron | 35.0% | |
ATAGCACAAAGGATTCACAA+TGG | + | chr4.2:14052777-14052796 | MS.gene023427:intron | 35.0% | |
CAAAAACATGAGGTTCTGTA+GGG | - | chr4.2:14054356-14054375 | None:intergenic | 35.0% | |
CACACAGTGTATTTCATTAC+AGG | + | chr4.2:14051624-14051643 | MS.gene023427:CDS | 35.0% | |
CATGCAACATATTATCAACG+AGG | - | chr4.2:14052005-14052024 | None:intergenic | 35.0% | |
CCAACTATTGTTTATTCACC+AGG | + | chr4.2:14055544-14055563 | MS.gene023427:CDS | 35.0% | |
CCTGGTGAATAAACAATAGT+TGG | - | chr4.2:14055547-14055566 | None:intergenic | 35.0% | |
CTAATCAAGGAGTTCTATCA+TGG | - | chr4.2:14055835-14055854 | None:intergenic | 35.0% | |
CTGATGTGAATGTATTGTCA+TGG | + | chr4.2:14054460-14054479 | MS.gene023427:CDS | 35.0% | |
CTGGAGTTATCACTGTTAAA+TGG | + | chr4.2:14051087-14051106 | MS.gene023427:intron | 35.0% | |
CTGTTCATTACCGATCAAAT+GGG | + | chr4.2:14051723-14051742 | MS.gene023427:intron | 35.0% | |
CTTGGGTAATGACAAAATCT+GGG | - | chr4.2:14052901-14052920 | None:intergenic | 35.0% | |
GAATAAAGTGCGAGATCAAA+AGG | - | chr4.2:14050789-14050808 | None:intergenic | 35.0% | |
GATACGACAGAAAAGTTGAA+GGG | - | chr4.2:14052620-14052639 | None:intergenic | 35.0% | |
GCAAAGTGATTCAAATTACC+TGG | - | chr4.2:14055565-14055584 | None:intergenic | 35.0% | |
GTAATGAAATACACTGTGTG+TGG | - | chr4.2:14051624-14051643 | None:intergenic | 35.0% | |
GTTGATCTTCATGTTTGTAG+GGG | + | chr4.2:14054096-14054115 | MS.gene023427:intron | 35.0% | |
TAATCCTTTGCCACAGAATA+TGG | + | chr4.2:14055432-14055451 | MS.gene023427:intron | 35.0% | |
TAGCACAAAGGATTCACAAT+GGG | + | chr4.2:14052778-14052797 | MS.gene023427:intron | 35.0% | |
TATTTGCAGAGTCCATGAAA+GGG | - | chr4.2:14055350-14055369 | None:intergenic | 35.0% | |
TCATAGCTCTTGAATTGCAA+TGG | - | chr4.2:14051155-14051174 | None:intergenic | 35.0% | |
TCATTCAACTGTTAATGTGG+GGG | - | chr4.2:14052972-14052991 | None:intergenic | 35.0% | |
TCCTTAGCCAAGTAAATGTT+TGG | + | chr4.2:14052439-14052458 | MS.gene023427:intron | 35.0% | |
TCTTTCCTACATGCTATTAG+TGG | + | chr4.2:14052643-14052662 | MS.gene023427:intron | 35.0% | |
TGAATAAACAATAGTTGGGG+AGG | - | chr4.2:14055542-14055561 | None:intergenic | 35.0% | |
TGAATGTATTGTCATGGAAC+AGG | + | chr4.2:14054466-14054485 | MS.gene023427:CDS | 35.0% | |
TGATACGACAGAAAAGTTGA+AGG | - | chr4.2:14052621-14052640 | None:intergenic | 35.0% | |
TGTCTCATGAATCATCTTGA+AGG | + | chr4.2:14051694-14051713 | MS.gene023427:intron | 35.0% | |
TGTTCATTACCGATCAAATG+GGG | + | chr4.2:14051724-14051743 | MS.gene023427:intron | 35.0% | |
TTATTTGCAGAGTCCATGAA+AGG | - | chr4.2:14055351-14055370 | None:intergenic | 35.0% | |
TTTAGCTACATGATTGTGGT+TGG | + | chr4.2:14053164-14053183 | MS.gene023427:intron | 35.0% | |
TTTCATTGTACTGAGTAGGT+TGG | + | chr4.2:14054557-14054576 | MS.gene023427:intron | 35.0% | |
! | ACCCAGAAATGCATTTTTGA+AGG | + | chr4.2:14054957-14054976 | MS.gene023427:intron | 35.0% |
! | ATTGGTGACATTGGTAACAT+TGG | + | chr4.2:14051277-14051296 | MS.gene023427:intron | 35.0% |
! | CAGGTATAATTTTTGCCCTT+GGG | + | chr4.2:14053487-14053506 | MS.gene023427:intron | 35.0% |
! | GATATTTTACGTGACACCAT+GGG | + | chr4.2:14051579-14051598 | MS.gene023427:CDS | 35.0% |
! | GGTTTTTCTATATGGGCAAA+GGG | - | chr4.2:14054669-14054688 | None:intergenic | 35.0% |
! | GTTTTTCTATATGGGCAAAG+GGG | - | chr4.2:14054668-14054687 | None:intergenic | 35.0% |
! | TCCATGCTTTTCATATTGGA+TGG | + | chr4.2:14050990-14051009 | MS.gene023427:CDS | 35.0% |
! | TCTAATGAGTTGAAGTTTGC+TGG | + | chr4.2:14053108-14053127 | MS.gene023427:intron | 35.0% |
! | TCTCTCCATGCTTTTCATAT+TGG | + | chr4.2:14050986-14051005 | MS.gene023427:CDS | 35.0% |
! | TGAAACTGATGACTCTGAAA+TGG | + | chr4.2:14052116-14052135 | MS.gene023427:CDS | 35.0% |
! | TGACATAGAATTGGTGACAT+TGG | + | chr4.2:14051268-14051287 | MS.gene023427:intron | 35.0% |
! | TGGTTTTTCTATATGGGCAA+AGG | - | chr4.2:14054670-14054689 | None:intergenic | 35.0% |
!! | ATACTAGCTCTGAACTTTGT+CGG | - | chr4.2:14053433-14053452 | None:intergenic | 35.0% |
!! | GGTAACGGAAAAGTTGATAT+TGG | + | chr4.2:14051745-14051764 | MS.gene023427:intron | 35.0% |
!! | TTAAATTTTAGCGGCAGCTA+AGG | + | chr4.2:14053705-14053724 | MS.gene023427:intron | 35.0% |
!! | TTGTCCCTGTTTCAAGTTAA+AGG | - | chr4.2:14055885-14055904 | None:intergenic | 35.0% |
!!! | AGGTATTCAGCATTGACTTT+TGG | + | chr4.2:14054486-14054505 | MS.gene023427:intron | 35.0% |
!!! | GCAAATTGCACTGATTGTTT+TGG | + | chr4.2:14052842-14052861 | MS.gene023427:intron | 35.0% |
AAAGGCAAAGAGCAAGAACA+AGG | + | chr4.2:14050736-14050755 | MS.gene023427:CDS | 40.0% | |
AACATTGTCAAAGGGATGCT+TGG | - | chr4.2:14052919-14052938 | None:intergenic | 40.0% | |
AAGAAAGGTCCCATATTCTG+TGG | - | chr4.2:14055445-14055464 | None:intergenic | 40.0% | |
AAGGAACTTCTAGATGCACT+TGG | + | chr4.2:14054976-14054995 | MS.gene023427:intron | 40.0% | |
ACATTGTCAAAGGGATGCTT+GGG | - | chr4.2:14052918-14052937 | None:intergenic | 40.0% | |
ACGTCTCTTCCCAGAAATAT+TGG | - | chr4.2:14052079-14052098 | None:intergenic | 40.0% | |
AGAGCTTGGAATTGTAACTG+AGG | + | chr4.2:14053022-14053041 | MS.gene023427:intron | 40.0% | |
AGGATTCACAATGGGAATAG+AGG | + | chr4.2:14052786-14052805 | MS.gene023427:intron | 40.0% | |
AGTAACCTCATTTGTACCCA+AGG | - | chr4.2:14053506-14053525 | None:intergenic | 40.0% | |
ATACCGACACTTCTGATTGA+AGG | - | chr4.2:14051440-14051459 | None:intergenic | 40.0% | |
ATAGTATGTACTGCAGCAGA+TGG | + | chr4.2:14055950-14055969 | MS.gene023427:CDS | 40.0% | |
ATCCAATCACATCCATTGAG+TGG | + | chr4.2:14055161-14055180 | MS.gene023427:CDS | 40.0% | |
ATCCCCATATATGTGCATCT+TGG | + | chr4.2:14052369-14052388 | MS.gene023427:CDS | 40.0% | |
ATGAAGGCTATGCTATAGAC+TGG | + | chr4.2:14053959-14053978 | MS.gene023427:CDS | 40.0% | |
CAATATGGGATACTCGTTTG+GGG | + | chr4.2:14054403-14054422 | MS.gene023427:CDS | 40.0% | |
CAGAATATGGGACCTTTCTT+TGG | + | chr4.2:14055445-14055464 | MS.gene023427:intron | 40.0% | |
CCAAGGGCAAAAATTATACC+TGG | - | chr4.2:14053489-14053508 | None:intergenic | 40.0% | |
CGGCATAAAACATCGTCAAA+AGG | + | chr4.2:14050718-14050737 | MS.gene023427:CDS | 40.0% | |
CTCACGAAGGTTGTATTAAC+CGG | + | chr4.2:14052327-14052346 | MS.gene023427:CDS | 40.0% | |
CTGTCAGTATGTCCAGTAAA+AGG | - | chr4.2:14054187-14054206 | None:intergenic | 40.0% | |
GAAACGGAGTGAATCATCTT+CGG | + | chr4.2:14050865-14050884 | MS.gene023427:intron | 40.0% | |
GAATTCGTCCAACAATTCTG+TGG | - | chr4.2:14055274-14055293 | None:intergenic | 40.0% | |
GACATGAGCTCTCATCTTAA+TGG | + | chr4.2:14053859-14053878 | MS.gene023427:CDS | 40.0% | |
GAGCAAGAAGCAAAAACATG+AGG | - | chr4.2:14054366-14054385 | None:intergenic | 40.0% | |
GAGTCATCAGTTTCACGTTT+AGG | - | chr4.2:14052111-14052130 | None:intergenic | 40.0% | |
GATAGTGAAGACGAAGAAGA+AGG | + | chr4.2:14052165-14052184 | MS.gene023427:CDS | 40.0% | |
GCAAAAACATGAGGTTCTGT+AGG | - | chr4.2:14054357-14054376 | None:intergenic | 40.0% | |
GCAATATGGGATACTCGTTT+GGG | + | chr4.2:14054402-14054421 | MS.gene023427:CDS | 40.0% | |
GCACTTGAGTGACATAGAAT+TGG | - | chr4.2:14051376-14051395 | None:intergenic | 40.0% | |
GCAGTACATACTATCATTCC+AGG | - | chr4.2:14055944-14055963 | None:intergenic | 40.0% | |
GCCATCCAATATGAAAAGCA+TGG | - | chr4.2:14050994-14051013 | None:intergenic | 40.0% | |
GCTCAACAATGAGTACGTTT+GGG | + | chr4.2:14055583-14055602 | MS.gene023427:intron | 40.0% | |
GCTTGGGTAATGACAAAATC+TGG | - | chr4.2:14052902-14052921 | None:intergenic | 40.0% | |
GCTTGTATCCGGTAATCATT+GGG | + | chr4.2:14054002-14054021 | MS.gene023427:intron | 40.0% | |
GGATTCACAATGGGAATAGA+GGG | + | chr4.2:14052787-14052806 | MS.gene023427:intron | 40.0% | |
GTAACCTCATTTGTACCCAA+GGG | - | chr4.2:14053505-14053524 | None:intergenic | 40.0% | |
GTATTCAAAATGCGCTACCA+CGG | - | chr4.2:14055134-14055153 | None:intergenic | 40.0% | |
GTATTTCATTACAGGGACAC+AGG | + | chr4.2:14051632-14051651 | MS.gene023427:CDS | 40.0% | |
TACACCATCCACAGAATTGT+TGG | + | chr4.2:14055263-14055282 | MS.gene023427:intron | 40.0% | |
TCAACTTCAACACAGTCAAG+AGG | - | chr4.2:14052259-14052278 | None:intergenic | 40.0% | |
TCAGACTGCTTAAGGTATGT+TGG | + | chr4.2:14054634-14054653 | MS.gene023427:intron | 40.0% | |
TCCCCATATATGTGCATCTT+GGG | + | chr4.2:14052370-14052389 | MS.gene023427:CDS | 40.0% | |
TGCAATATGGGATACTCGTT+TGG | + | chr4.2:14054401-14054420 | MS.gene023427:CDS | 40.0% | |
TGCCCAAGATGCACATATAT+GGG | - | chr4.2:14052375-14052394 | None:intergenic | 40.0% | |
TGCTCAACAATGAGTACGTT+TGG | + | chr4.2:14055582-14055601 | MS.gene023427:intron | 40.0% | |
TGGAGAGAATTGTAAGCAGA+AGG | - | chr4.2:14050974-14050993 | None:intergenic | 40.0% | |
TGGATGTGATTGGATGCTTA+TGG | - | chr4.2:14055156-14055175 | None:intergenic | 40.0% | |
TTACCGATCAAATGGGGTAA+CGG | + | chr4.2:14051730-14051749 | MS.gene023427:intron | 40.0% | |
TTCTGTTCGAACTAAACCCA+TGG | - | chr4.2:14051598-14051617 | None:intergenic | 40.0% | |
TTGTAACTGAGGACTCGATT+TGG | + | chr4.2:14053033-14053052 | MS.gene023427:intron | 40.0% | |
TTTCCGTTACCCCATTTGAT+CGG | - | chr4.2:14051736-14051755 | None:intergenic | 40.0% | |
! | ACACCTTCAATCAGAAGTGT+CGG | + | chr4.2:14051434-14051453 | MS.gene023427:intron | 40.0% |
! | ATGGGACCTTTCTTTGGAAA+AGG | + | chr4.2:14055451-14055470 | MS.gene023427:CDS | 40.0% |
! | CCAGGTATAATTTTTGCCCT+TGG | + | chr4.2:14053486-14053505 | MS.gene023427:intron | 40.0% |
! | CGATATTTTACGTGACACCA+TGG | + | chr4.2:14051578-14051597 | MS.gene023427:CDS | 40.0% |
! | GTCGGTATTTAGAGTTCAAG+AGG | + | chr4.2:14051452-14051471 | MS.gene023427:intron | 40.0% |
! | TAGGTTGGCTAGTTGTATGT+TGG | + | chr4.2:14054572-14054591 | MS.gene023427:intron | 40.0% |
! | TATATGGGGATTTTGTGCCA+TGG | - | chr4.2:14052360-14052379 | None:intergenic | 40.0% |
!! | ACTGATGACTCTGAAATGGA+TGG | + | chr4.2:14052120-14052139 | MS.gene023427:CDS | 40.0% |
!! | AGGAGCGTTTACTTGTTCTT+GGG | - | chr4.2:14055510-14055529 | None:intergenic | 40.0% |
!! | AGTTGAAGGGTGCCAAATAA+TGG | - | chr4.2:14052607-14052626 | None:intergenic | 40.0% |
!! | ATATTGGATGGCCTTGTCTT+AGG | + | chr4.2:14051002-14051021 | MS.gene023427:CDS | 40.0% |
!! | CTTTGGGTTTTACCCTTTCA+TGG | + | chr4.2:14055335-14055354 | MS.gene023427:intron | 40.0% |
!! | GTTCCGAAAAAGGTATTGCT+TGG | - | chr4.2:14054241-14054260 | None:intergenic | 40.0% |
AAGACCCCAAAGAACTGCAT+TGG | + | chr4.2:14055906-14055925 | MS.gene023427:CDS | 45.0% | |
AGTGAAGACGAAGAAGAAGG+TGG | + | chr4.2:14052168-14052187 | MS.gene023427:CDS | 45.0% | |
ATCAACTCCTTGGACACCTT+CGG | - | chr4.2:14053902-14053921 | None:intergenic | 45.0% | |
CAAGAAGATTTCTCAGCCTG+GGG | - | chr4.2:14052030-14052049 | None:intergenic | 45.0% | |
CACTAGCAGATAGCATCACA+AGG | - | chr4.2:14051865-14051884 | None:intergenic | 45.0% | |
CCAAGAAGATTTCTCAGCCT+GGG | - | chr4.2:14052031-14052050 | None:intergenic | 45.0% | |
CTCCACTCAATGGATGTGAT+TGG | - | chr4.2:14055166-14055185 | None:intergenic | 45.0% | |
CTGCCCAAGATGCACATATA+TGG | - | chr4.2:14052376-14052395 | None:intergenic | 45.0% | |
GCACTTGGGTGACATAGAAT+TGG | + | chr4.2:14051259-14051278 | MS.gene023427:intron | 45.0% | |
GCCCAAGATGCACATATATG+GGG | - | chr4.2:14052374-14052393 | None:intergenic | 45.0% | |
GGCTTGTATCCGGTAATCAT+TGG | + | chr4.2:14054001-14054020 | MS.gene023427:intron | 45.0% | |
GTGTGCCAATGCAGTTCTTT+GGG | - | chr4.2:14055914-14055933 | None:intergenic | 45.0% | |
GTTGTGGCTGAATAGCACAA+AGG | + | chr4.2:14052766-14052785 | MS.gene023427:intron | 45.0% | |
TAATATGTTGCATGTGCCCC+AGG | + | chr4.2:14052011-14052030 | MS.gene023427:intron | 45.0% | |
TACACCGACACAAGTGACTA+CGG | - | chr4.2:14051402-14051421 | None:intergenic | 45.0% | |
TAGTCACTTGGGTAGCACTT+GGG | + | chr4.2:14051245-14051264 | MS.gene023427:intron | 45.0% | |
TATTAACCGGATACGCTCCA+TGG | + | chr4.2:14052340-14052359 | MS.gene023427:CDS | 45.0% | |
TATTATCTCCCGACCTGTTG+TGG | - | chr4.2:14053407-14053426 | None:intergenic | 45.0% | |
TCCAAGAAGATTTCTCAGCC+TGG | - | chr4.2:14052032-14052051 | None:intergenic | 45.0% | |
TCCACACGAAGCTTCTTCAT+TGG | + | chr4.2:14055186-14055205 | MS.gene023427:CDS | 45.0% | |
TCGAGCCACTAATAGCATGT+AGG | - | chr4.2:14052651-14052670 | None:intergenic | 45.0% | |
TCGTCCAACAATTCTGTGGA+TGG | - | chr4.2:14055270-14055289 | None:intergenic | 45.0% | |
TCGTGATCTCAGACTGCTTA+AGG | + | chr4.2:14054626-14054645 | MS.gene023427:CDS | 45.0% | |
TCTGTTCACACCTACAGTTG+CGG | + | chr4.2:14052297-14052316 | MS.gene023427:intron | 45.0% | |
TCTTCCAACTTATCCACACC+AGG | - | chr4.2:14050929-14050948 | None:intergenic | 45.0% | |
TGAATAGGAAGGAGATTCCG+TGG | + | chr4.2:14055114-14055133 | MS.gene023427:intron | 45.0% | |
TGTGCCAATGCAGTTCTTTG+GGG | - | chr4.2:14055913-14055932 | None:intergenic | 45.0% | |
TGTGTGCCAATGCAGTTCTT+TGG | - | chr4.2:14055915-14055934 | None:intergenic | 45.0% | |
TGTTCAATGAACCCTTGCAG+TGG | + | chr4.2:14054328-14054347 | MS.gene023427:intron | 45.0% | |
TTCCATGTTGCAGCAGATGT+AGG | - | chr4.2:14054151-14054170 | None:intergenic | 45.0% | |
TTGGCTAAGGACCAGTCATA+GGG | - | chr4.2:14052430-14052449 | None:intergenic | 45.0% | |
TTTGCCCTTGGGTACAAATG+AGG | + | chr4.2:14053498-14053517 | MS.gene023427:intron | 45.0% | |
TTTGGAAAAGGACGAGGAAG+AGG | + | chr4.2:14055463-14055482 | MS.gene023427:CDS | 45.0% | |
! | CCGCCAAGCAATACCTTTTT+CGG | + | chr4.2:14054235-14054254 | MS.gene023427:intron | 45.0% |
! | CCTCGTCCTTTTCCAAAGAA+AGG | - | chr4.2:14055460-14055479 | None:intergenic | 45.0% |
! | CCTTTCTTTGGAAAAGGACG+AGG | + | chr4.2:14055457-14055476 | MS.gene023427:CDS | 45.0% |
! | TATTTCTGCGGTTCCACAAC+AGG | + | chr4.2:14053391-14053410 | MS.gene023427:intron | 45.0% |
! | TGTTGGTAGGTTCACAAGTC+AGG | - | chr4.2:14053358-14053377 | None:intergenic | 45.0% |
!! | CAGGAGCGTTTACTTGTTCT+TGG | - | chr4.2:14055511-14055530 | None:intergenic | 45.0% |
!! | CCGAAAAAGGTATTGCTTGG+CGG | - | chr4.2:14054238-14054257 | None:intergenic | 45.0% |
!! | TGACTCTGAAATGGATGGTG+AGG | + | chr4.2:14052125-14052144 | MS.gene023427:CDS | 45.0% |
!! | TGCGTCTTTTCAAGCACACA+AGG | + | chr4.2:14054437-14054456 | MS.gene023427:CDS | 45.0% |
!! | TGTTTTTGCTTCTTGCTCCG+TGG | + | chr4.2:14054368-14054387 | MS.gene023427:CDS | 45.0% |
ACACCGACACAAGTGACTAC+GGG | - | chr4.2:14051401-14051420 | None:intergenic | 50.0% | |
ACGGAGTGAATCATCTTCGG+CGG | + | chr4.2:14050868-14050887 | MS.gene023427:CDS | 50.0% | |
ACTGGAGTCCTCTTGTTCCA+GGG | + | chr4.2:14053977-14053996 | MS.gene023427:CDS | 50.0% | |
AGCCTACATCTGCTGCAACA+TGG | + | chr4.2:14054146-14054165 | MS.gene023427:CDS | 50.0% | |
AGCGGCAGCTAAGGTTGTTA+AGG | + | chr4.2:14053714-14053733 | MS.gene023427:intron | 50.0% | |
AGGTTCACAAGTCAGGTCGT+GGG | - | chr4.2:14053351-14053370 | None:intergenic | 50.0% | |
CACAGGTTCCGGTAAAAGTG+TGG | + | chr4.2:14050900-14050919 | MS.gene023427:CDS | 50.0% | |
CATTGGCACACACAGATTCC+TGG | + | chr4.2:14055923-14055942 | MS.gene023427:CDS | 50.0% | |
CCCAGGCTGAGAAATCTTCT+TGG | + | chr4.2:14052028-14052047 | MS.gene023427:intron | 50.0% | |
CCTGAACTGCATCAACTCCT+TGG | - | chr4.2:14053912-14053931 | None:intergenic | 50.0% | |
CTACCCGTAGTCACTTGTGT+CGG | + | chr4.2:14051395-14051414 | MS.gene023427:intron | 50.0% | |
CTAGCAGAGACAGAAACCGA+AGG | + | chr4.2:14053883-14053902 | MS.gene023427:CDS | 50.0% | |
CTTGGCTAAGGACCAGTCAT+AGG | - | chr4.2:14052431-14052450 | None:intergenic | 50.0% | |
GAGTTACCTTCCGCAACTGT+AGG | - | chr4.2:14052310-14052329 | None:intergenic | 50.0% | |
GCAACCTGGTGTGGATAAGT+TGG | + | chr4.2:14050922-14050941 | MS.gene023427:CDS | 50.0% | |
GCCAATGAAGAAGCTTCGTG+TGG | - | chr4.2:14055190-14055209 | None:intergenic | 50.0% | |
GCCGATCACAATGTCACAAG+CGG | + | chr4.2:14051299-14051318 | MS.gene023427:intron | 50.0% | |
GCCGCTTGTGACATTGTGAT+CGG | - | chr4.2:14051303-14051322 | None:intergenic | 50.0% | |
GCGGCAGCTAAGGTTGTTAA+GGG | + | chr4.2:14053715-14053734 | MS.gene023427:intron | 50.0% | |
GCTAGTTGTATGTTGGCGTC+GGG | + | chr4.2:14054579-14054598 | MS.gene023427:CDS | 50.0% | |
GGTCCCATATTCTGTGGCAA+AGG | - | chr4.2:14055439-14055458 | None:intergenic | 50.0% | |
GTAGTCACTTGGGTAGCACT+TGG | + | chr4.2:14051244-14051263 | MS.gene023427:intron | 50.0% | |
TACCTGCAAAGTAGGACCAC+CGG | - | chr4.2:14052196-14052215 | None:intergenic | 50.0% | |
TAGGTTCACAAGTCAGGTCG+TGG | - | chr4.2:14053352-14053371 | None:intergenic | 50.0% | |
TATGGGATACTCGTTTGGGG+AGG | + | chr4.2:14054406-14054425 | MS.gene023427:CDS | 50.0% | |
TCATGCAGCTTCTGATGGCA+AGG | - | chr4.2:14056011-14056030 | None:intergenic | 50.0% | |
TGTGCATCTTGGGCAGAATC+TGG | + | chr4.2:14052380-14052399 | MS.gene023427:CDS | 50.0% | |
TGTGCTTGAAAAGACGCAGC+TGG | - | chr4.2:14054435-14054454 | None:intergenic | 50.0% | |
TTCACACCTACAGTTGCGGA+AGG | + | chr4.2:14052301-14052320 | MS.gene023427:intron | 50.0% | |
TTCGTGTGGACTCCACTCAA+TGG | - | chr4.2:14055176-14055195 | None:intergenic | 50.0% | |
TTGCGGAAGGTAACTCACGA+AGG | + | chr4.2:14052314-14052333 | MS.gene023427:CDS | 50.0% | |
TTTGTGCCATGGAGCGTATC+CGG | - | chr4.2:14052349-14052368 | None:intergenic | 50.0% | |
! | AAAAGTGTGGCAACCTGGTG+TGG | + | chr4.2:14050913-14050932 | MS.gene023427:CDS | 50.0% |
! | AAATCTGGGACATCAGCCCA+TGG | - | chr4.2:14052887-14052906 | None:intergenic | 50.0% |
! | CACACTTTTACCGGAACCTG+TGG | - | chr4.2:14050902-14050921 | None:intergenic | 50.0% |
! | CCAGGTTGCCACACTTTTAC+CGG | - | chr4.2:14050911-14050930 | None:intergenic | 50.0% |
! | CTTGTGTCGGTGTAGTACAC+TGG | + | chr4.2:14051408-14051427 | MS.gene023427:intron | 50.0% |
! | GGCTAGTTGTATGTTGGCGT+CGG | + | chr4.2:14054578-14054597 | MS.gene023427:CDS | 50.0% |
! | TGGTGAGGATAGTGATAGCG+AGG | + | chr4.2:14052140-14052159 | MS.gene023427:CDS | 50.0% |
!! | ACAGAAACCGAAGGTGTCCA+AGG | + | chr4.2:14053892-14053911 | MS.gene023427:CDS | 50.0% |
!! | CCAAGGAGTTGATGCAGTTC+AGG | + | chr4.2:14053909-14053928 | MS.gene023427:CDS | 50.0% |
!! | CTAGCTCTGAACTTTGTCGG+AGG | - | chr4.2:14053430-14053449 | None:intergenic | 50.0% |
!! | GAGGGTGTTACCTGCAAAGT+AGG | - | chr4.2:14052204-14052223 | None:intergenic | 50.0% |
ACAAGCCTCCCTGGAACAAG+AGG | - | chr4.2:14053988-14054007 | None:intergenic | 55.0% | |
AGTTGGGGAGGCAGATCTTC+AGG | - | chr4.2:14055530-14055549 | None:intergenic | 55.0% | |
GACGAAGAAGAAGGTGGTGC+CGG | + | chr4.2:14052174-14052193 | MS.gene023427:CDS | 55.0% | |
GACTGGAGTCCTCTTGTTCC+AGG | + | chr4.2:14053976-14053995 | MS.gene023427:CDS | 55.0% | |
GAGTGAATCATCTTCGGCGG+CGG | + | chr4.2:14050871-14050890 | MS.gene023427:CDS | 55.0% | |
GGAAAAGGACGAGGAAGAGG+AGG | + | chr4.2:14055466-14055485 | MS.gene023427:CDS | 55.0% | |
GGCAGAATCTGGTCATGTGC+AGG | + | chr4.2:14052391-14052410 | MS.gene023427:CDS | 55.0% | |
GTTCCAGGGAGGCTTGTATC+CGG | + | chr4.2:14053991-14054010 | MS.gene023427:CDS | 55.0% | |
TCTGCGGTTCCACAACAGGT+CGG | + | chr4.2:14053395-14053414 | MS.gene023427:intron | 55.0% | |
TCTGTAGGGCTCCACTGCAA+GGG | - | chr4.2:14054342-14054361 | None:intergenic | 55.0% | |
TTACCGGATACAAGCCTCCC+TGG | - | chr4.2:14053997-14054016 | None:intergenic | 55.0% | |
TTCTGTAGGGCTCCACTGCA+AGG | - | chr4.2:14054343-14054362 | None:intergenic | 55.0% | |
! | CCGGTAAAAGTGTGGCAACC+TGG | + | chr4.2:14050908-14050927 | MS.gene023427:CDS | 55.0% |
! | TGGCGTCGGGTAGTGATGAT+GGG | + | chr4.2:14054592-14054611 | MS.gene023427:CDS | 55.0% |
! | TTCTGGGAAGAGACGTGAGC+TGG | + | chr4.2:14052083-14052102 | MS.gene023427:CDS | 55.0% |
! | TTGGCGTCGGGTAGTGATGA+TGG | + | chr4.2:14054591-14054610 | MS.gene023427:CDS | 55.0% |
CTGCGGTTCCACAACAGGTC+GGG | + | chr4.2:14053396-14053415 | MS.gene023427:intron | 60.0% | |
GGAGTCCTCTTGTTCCAGGG+AGG | + | chr4.2:14053980-14053999 | MS.gene023427:CDS | 60.0% | |
TGAATCATCTTCGGCGGCGG+CGG | + | chr4.2:14050874-14050893 | MS.gene023427:CDS | 60.0% | |
TGCCGGTGGTCCTACTTTGC+AGG | + | chr4.2:14052191-14052210 | MS.gene023427:CDS | 60.0% | |
! | GAAGAAGAAGGTGGTGCCGG+TGG | + | chr4.2:14052177-14052196 | MS.gene023427:CDS | 60.0% |
! | GGCGGCGGCGCCACAGGTTC+CGG | + | chr4.2:14050889-14050908 | MS.gene023427:CDS | 80.0% |
! | TTCGGCGGCGGCGGCGCCAC+AGG | + | chr4.2:14050883-14050902 | MS.gene023427:CDS | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 14050710 | 14056030 | 14050710 | ID=MS.gene023427 |
chr4.2 | mRNA | 14050710 | 14056030 | 14050710 | ID=MS.gene023427.t1;Parent=MS.gene023427 |
chr4.2 | exon | 14050710 | 14050757 | 14050710 | ID=MS.gene023427.t1.exon1;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14050710 | 14050757 | 14050710 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14050866 | 14051023 | 14050866 | ID=MS.gene023427.t1.exon2;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14050866 | 14051023 | 14050866 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14051575 | 14051653 | 14051575 | ID=MS.gene023427.t1.exon3;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14051575 | 14051653 | 14051575 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14052033 | 14052212 | 14052033 | ID=MS.gene023427.t1.exon4;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14052033 | 14052212 | 14052033 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14052314 | 14052412 | 14052314 | ID=MS.gene023427.t1.exon5;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14052314 | 14052412 | 14052314 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14053853 | 14054012 | 14053853 | ID=MS.gene023427.t1.exon6;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14053853 | 14054012 | 14053853 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14054116 | 14054222 | 14054116 | ID=MS.gene023427.t1.exon7;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14054116 | 14054222 | 14054116 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14054348 | 14054487 | 14054348 | ID=MS.gene023427.t1.exon8;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14054348 | 14054487 | 14054348 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14054575 | 14054647 | 14054575 | ID=MS.gene023427.t1.exon9;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14054575 | 14054647 | 14054575 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14055121 | 14055236 | 14055121 | ID=MS.gene023427.t1.exon10;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14055121 | 14055236 | 14055121 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14055448 | 14055565 | 14055448 | ID=MS.gene023427.t1.exon11;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14055448 | 14055565 | 14055448 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
chr4.2 | exon | 14055899 | 14056030 | 14055899 | ID=MS.gene023427.t1.exon12;Parent=MS.gene023427.t1 |
chr4.2 | CDS | 14055899 | 14056030 | 14055899 | ID=cds.MS.gene023427.t1;Parent=MS.gene023427.t1 |
Gene Sequence |
Protein sequence |