Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24284.t1 | RHN77464.1 | 96 | 642 | 25 | 1 | 1 | 641 | 1 | 642 | 0.00E+00 | 1209.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24284.t1 | Q8RXN5 | 71.1 | 637 | 174 | 4 | 4 | 633 | 5 | 638 | 7.8e-269 | 927.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24284.t1 | A0A396JJV0 | 96.0 | 642 | 25 | 1 | 1 | 641 | 1 | 642 | 0.0e+00 | 1209.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene023432 | MS.gene24284 | PPI |
MS.gene08538 | MS.gene24284 | PPI |
MS.gene023431 | MS.gene24284 | PPI |
MS.gene64879 | MS.gene24284 | PPI |
MS.gene023427 | MS.gene24284 | PPI |
MS.gene65363 | MS.gene24284 | PPI |
MS.gene08537 | MS.gene24284 | PPI |
MS.gene09221 | MS.gene24284 | PPI |
MS.gene72649 | MS.gene24284 | PPI |
MS.gene09026 | MS.gene24284 | PPI |
MS.gene023429 | MS.gene24284 | PPI |
MS.gene023430 | MS.gene24284 | PPI |
MS.gene049876 | MS.gene24284 | PPI |
MS.gene65323 | MS.gene24284 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24284.t1 | MTR_1g022235 | 96.834 | 379 | 11 | 1 | 1 | 378 | 1 | 379 | 0.0 | 766 |
MS.gene24284.t1 | MTR_1g022225 | 99.219 | 256 | 2 | 0 | 386 | 641 | 1 | 256 | 0.0 | 536 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24284.t1 | AT1G75200 | 72.100 | 638 | 166 | 5 | 4 | 633 | 5 | 638 | 0.0 | 949 |
Find 180 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGGGTTAGGGTTGGGGTTT+TGG | 0.092746 | 1.1:-2076092 | None:intergenic |
TCCTGTTATTAGAGCAAATT+TGG | 0.158620 | 1.1:+2076776 | MS.gene24284:CDS |
GACCACTCTTTGGAGATTTC+TGG | 0.166707 | 1.1:+2082110 | MS.gene24284:CDS |
ATTTAAATTCAGGTGGCTTC+TGG | 0.249615 | 1.1:+2082945 | MS.gene24284:intron |
TTGCAGGGTTATAAGATTAT+TGG | 0.257743 | 1.1:+2077335 | MS.gene24284:intron |
TTTATCTCTGGATACATAAT+AGG | 0.262090 | 1.1:-2081854 | None:intergenic |
ACCAAATTTGCTCTAATAAC+AGG | 0.278071 | 1.1:-2076777 | None:intergenic |
GCAGAATTCACGATCTCTAT+TGG | 0.280496 | 1.1:-2078100 | None:intergenic |
CGTTTCCTTGGGGAGATCTT+CGG | 0.282190 | 1.1:-2076229 | None:intergenic |
ACACCATCCTGGGCCGTCTA+TGG | 0.292318 | 1.1:+2083002 | MS.gene24284:CDS |
AACCTCAAAACCTGGGTAAT+AGG | 0.319156 | 1.1:-2081965 | None:intergenic |
GTTTCCTTGGGGAGATCTTC+GGG | 0.325569 | 1.1:-2076228 | None:intergenic |
AAGTGTAGATTTGCGGTATT+CGG | 0.326741 | 1.1:+2076372 | MS.gene24284:CDS |
TTTACGGAATTGAGAGTCAT+AGG | 0.364405 | 1.1:+2077435 | MS.gene24284:CDS |
CTTCCTCGAAGGTGCTTTAC+CGG | 0.369795 | 1.1:-2076694 | None:intergenic |
CCCTTGATTTCAATGAAGTC+GGG | 0.372694 | 1.1:-2082528 | None:intergenic |
ACCACTCTTTGGAGATTTCT+GGG | 0.373617 | 1.1:+2082111 | MS.gene24284:CDS |
CTTAAGAGAGTCCTTTGTTC+CGG | 0.374790 | 1.1:-2082077 | None:intergenic |
ACTAAGAAGTTCAAAATTGA+TGG | 0.376599 | 1.1:+2082809 | MS.gene24284:CDS |
TGTTGATGATGGTGGTGATT+TGG | 0.380928 | 1.1:+2076572 | MS.gene24284:CDS |
TCCTTATCGTTGCTTCCACT+TGG | 0.382287 | 1.1:+2076256 | MS.gene24284:CDS |
AAGTCGAGCCGCAAAGAATC+AGG | 0.393504 | 1.1:+2083083 | MS.gene24284:CDS |
ATCCAGGACAGTTGAGATAT+AGG | 0.397266 | 1.1:+2083045 | MS.gene24284:CDS |
GAGGCGGTTAGAGAGGGTTT+TGG | 0.398722 | 1.1:-2076145 | None:intergenic |
TATTATAAACTCTTCAGTAT+TGG | 0.406516 | 1.1:+2082501 | MS.gene24284:CDS |
GTTGATCTTGAAGATATTGC+CGG | 0.412171 | 1.1:+2076675 | MS.gene24284:CDS |
ACTTCTAACCTGATTCTTTG+CGG | 0.414058 | 1.1:-2083091 | None:intergenic |
GATAAGGAGAAGCGTTTCCT+TGG | 0.416520 | 1.1:-2076241 | None:intergenic |
TTGTGGATGAGTTGCACAAA+AGG | 0.421585 | 1.1:+2081882 | MS.gene24284:CDS |
TAGAGCAAATTTGGTGAAGC+AGG | 0.424165 | 1.1:+2076785 | MS.gene24284:CDS |
GCGGTATTCGGTGTCGGTAG+TGG | 0.425958 | 1.1:+2076384 | MS.gene24284:CDS |
TGCATTTGTAACTAGAAAAG+TGG | 0.426329 | 1.1:-2081912 | None:intergenic |
CTATGATAAATTTCATGATC+TGG | 0.430965 | 1.1:+2082853 | MS.gene24284:CDS |
GCAATCGATAGACCACTCTT+TGG | 0.431413 | 1.1:+2082100 | MS.gene24284:CDS |
GTTGCTGAAGCCTATTACCC+AGG | 0.436691 | 1.1:+2081955 | MS.gene24284:CDS |
GTTTAATCATATTTGTATGC+TGG | 0.437012 | 1.1:-2078129 | None:intergenic |
CATTGTGCATTATCTCTTGT+TGG | 0.437204 | 1.1:+2081827 | MS.gene24284:CDS |
ACATGGCTGCCACACCATCC+TGG | 0.438997 | 1.1:+2082991 | MS.gene24284:CDS |
CGATTGGCTTGCGGAGAGTT+CGG | 0.440051 | 1.1:+2076317 | MS.gene24284:CDS |
ATAAGGAGAAGCGTTTCCTT+GGG | 0.442770 | 1.1:-2076240 | None:intergenic |
GGATTTGTAGAAGAAGTAGA+AGG | 0.443145 | 1.1:-2076031 | None:intergenic |
TCCACAAGTGTATTTATCTC+TGG | 0.443802 | 1.1:-2081866 | None:intergenic |
CGGAACAAAGGACTCTCTTA+AGG | 0.444253 | 1.1:+2082078 | MS.gene24284:CDS |
AGTATAAATTCTTCGCCGAT+TGG | 0.444572 | 1.1:+2076301 | MS.gene24284:CDS |
AAACAAATGAAAGGAGTTCC+TGG | 0.444665 | 1.1:+2078148 | MS.gene24284:CDS |
CAAATCCAGTAGCGAAAAGT+TGG | 0.447385 | 1.1:+2078059 | MS.gene24284:CDS |
TTCCTATATCTCAACTGTCC+TGG | 0.455066 | 1.1:-2083047 | None:intergenic |
TTATTTGCACATGCCAAGCT+AGG | 0.467055 | 1.1:-2078010 | None:intergenic |
GAGAGTAATGGGAAGTTGAA+TGG | 0.471230 | 1.1:+2076735 | MS.gene24284:CDS |
TCCATCCTTTCACAAGGGTC+AGG | 0.473152 | 1.1:-2082458 | None:intergenic |
TGCCGACGTGAAAGCTTTCT+CGG | 0.477548 | 1.1:+2082706 | MS.gene24284:CDS |
GCGAGGAGTGTGAGACGAGC+TGG | 0.480350 | 1.1:-2075991 | None:intergenic |
CTACGGTGAAGGAGAGTAAT+GGG | 0.482227 | 1.1:+2076724 | MS.gene24284:CDS |
AAGTGGTGTGGGAAGGTTGT+TGG | 0.484900 | 1.1:+2076537 | MS.gene24284:CDS |
ACCCGACTTCATTGAAATCA+AGG | 0.485531 | 1.1:+2082527 | MS.gene24284:CDS |
TGATGGTGGTGAGGTGGATG+AGG | 0.488135 | 1.1:+2076506 | MS.gene24284:CDS |
CATGGAGGCAACCCCTAGCT+TGG | 0.491145 | 1.1:+2077997 | MS.gene24284:CDS |
GTAGAAGAAGTAGAAGGTTG+TGG | 0.494820 | 1.1:-2076025 | None:intergenic |
GGTGAGAATTTCAATGCGGT+TGG | 0.495729 | 1.1:+2076414 | MS.gene24284:CDS |
ATCAAGGGTGTTACATATTG+TGG | 0.497705 | 1.1:+2082543 | MS.gene24284:CDS |
ACCCTTGATTTCAATGAAGT+CGG | 0.497934 | 1.1:-2082529 | None:intergenic |
CATGGCTGCCACACCATCCT+GGG | 0.498661 | 1.1:+2082992 | MS.gene24284:CDS |
TTCGAGGAAGCTGGTGGCTA+CGG | 0.500414 | 1.1:+2076707 | MS.gene24284:CDS |
AGAGTCTGATGAGGAGGAAG+AGG | 0.501593 | 1.1:+2076638 | MS.gene24284:CDS |
CAGCATTCCATCCTTTCACA+AGG | 0.501696 | 1.1:-2082464 | None:intergenic |
GTTGAATGGAAAGAAAGAAA+TGG | 0.505644 | 1.1:+2076749 | MS.gene24284:CDS |
GAAAAGTTGGGTGTGGGAGA+TGG | 0.507932 | 1.1:+2078072 | MS.gene24284:CDS |
CCCAAGTGGAAGCAACGATA+AGG | 0.508085 | 1.1:-2076257 | None:intergenic |
GAATTTCAATGCGGTTGGTA+AGG | 0.508915 | 1.1:+2076419 | MS.gene24284:CDS |
TATTTGCACATGCCAAGCTA+GGG | 0.514611 | 1.1:-2078009 | None:intergenic |
TCACTCGTGTTGTGTCCTCT+TGG | 0.516638 | 1.1:+2082781 | MS.gene24284:CDS |
GGATTCCTTGACTGCTCTGA+AGG | 0.516788 | 1.1:+2082410 | MS.gene24284:intron |
TGAGGAGGAAGAGGCGGAGT+CGG | 0.518460 | 1.1:+2076647 | MS.gene24284:CDS |
GGTAACGAGATGATTCCGTT+GGG | 0.519802 | 1.1:+2076471 | MS.gene24284:CDS |
GAGGAAGGTGGATTTGATCC+AGG | 0.523501 | 1.1:+2083029 | MS.gene24284:CDS |
AGGTGAGGAAACGGTGGAGG+CGG | 0.524499 | 1.1:-2076161 | None:intergenic |
CAGTAGCGAAAAGTTGGGTG+TGG | 0.532702 | 1.1:+2078065 | MS.gene24284:CDS |
TAAAGCACCTTCGAGGAAGC+TGG | 0.534689 | 1.1:+2076698 | MS.gene24284:CDS |
GGTGTCGGTAGTGGAGGTTA+TGG | 0.534919 | 1.1:+2076393 | MS.gene24284:CDS |
CTCAGCTCCATAGACGGCCC+AGG | 0.535554 | 1.1:-2083009 | None:intergenic |
GGTTGTTTGAGGTGAGGAAA+CGG | 0.535614 | 1.1:-2076170 | None:intergenic |
GTCGAATGCAAGGTTGTTTG+AGG | 0.536695 | 1.1:-2076181 | None:intergenic |
TTTGTCGAAGTGTAGATTTG+CGG | 0.536931 | 1.1:+2076365 | MS.gene24284:CDS |
AAGTCACAGCTTCGAGGTCG+AGG | 0.539284 | 1.1:+2077392 | MS.gene24284:CDS |
TTGATGGCCAGTGGTATACA+TGG | 0.541192 | 1.1:+2082825 | MS.gene24284:CDS |
GTTGCTTCCACTTGGGAAGA+CGG | 0.542672 | 1.1:+2076264 | MS.gene24284:CDS |
TTGAGGTGAGGAAACGGTGG+AGG | 0.544628 | 1.1:-2076164 | None:intergenic |
ATTCTTCGCCGATTGGCTTG+CGG | 0.545441 | 1.1:+2076308 | MS.gene24284:CDS |
CTCTGTCTCTGAAAAGCCAA+GGG | 0.546175 | 1.1:+2082732 | MS.gene24284:CDS |
AGGAGATGTTGATGGTGGTG+AGG | 0.548049 | 1.1:+2076497 | MS.gene24284:CDS |
TGTTGGTTTGAGAAATGAAG+AGG | 0.549143 | 1.1:-2076119 | None:intergenic |
GCTTTCACGTCGGCATGCCA+AGG | 0.550330 | 1.1:-2082698 | None:intergenic |
GAAGCTGGTGGCTACGGTGA+AGG | 0.550823 | 1.1:+2076713 | MS.gene24284:CDS |
GTGAAACGGATGAAGGCGTT+GGG | 0.552770 | 1.1:+2076447 | MS.gene24284:CDS |
GCCTGACCCTTGTGAAAGGA+TGG | 0.553096 | 1.1:+2082457 | MS.gene24284:CDS |
TGAAGAAGAGTCTGATGAGG+AGG | 0.553756 | 1.1:+2076632 | MS.gene24284:CDS |
CGAACTCTCCGCAAGCCAAT+CGG | 0.555358 | 1.1:-2076316 | None:intergenic |
TGGACTAAGTCACAGCTTCG+AGG | 0.559406 | 1.1:+2077386 | MS.gene24284:CDS |
AGGCAACTTCATACTCCCCT+TGG | 0.560657 | 1.1:-2082748 | None:intergenic |
AACGGTGGAGGCGGTTAGAG+AGG | 0.565434 | 1.1:-2076152 | None:intergenic |
CCTTATCGTTGCTTCCACTT+GGG | 0.567188 | 1.1:+2076257 | MS.gene24284:CDS |
GTCTGATGAGGAGGAAGAGG+CGG | 0.567189 | 1.1:+2076641 | MS.gene24284:CDS |
TGCTACATCAAAATTAACAA+TGG | 0.568819 | 1.1:+2082667 | MS.gene24284:CDS |
GGAGATTGTGAAACGGATGA+AGG | 0.571123 | 1.1:+2076440 | MS.gene24284:CDS |
TAACAATGGAAAATGTCCCT+TGG | 0.571608 | 1.1:+2082681 | MS.gene24284:CDS |
CGAGCTGGTACTGATGAGAA+TGG | 0.571729 | 1.1:-2075976 | None:intergenic |
AGTCTATCCATGTATACCAC+TGG | 0.572314 | 1.1:-2082832 | None:intergenic |
GCTCTGTCTCTGAAAAGCCA+AGG | 0.575623 | 1.1:+2082731 | MS.gene24284:CDS |
TCCAGAGATAAATACACTTG+TGG | 0.576447 | 1.1:+2081865 | MS.gene24284:CDS |
TCAGGCGGTATACAGTGCGC+TGG | 0.577014 | 1.1:-2082440 | None:intergenic |
ACGGTGGAGGCGGTTAGAGA+GGG | 0.577423 | 1.1:-2076151 | None:intergenic |
GCTACGGTGAAGGAGAGTAA+TGG | 0.579239 | 1.1:+2076723 | MS.gene24284:CDS |
TGGTAACGAGATGATTCCGT+TGG | 0.580232 | 1.1:+2076470 | MS.gene24284:CDS |
AGATGTTGATGGTGGTGAGG+TGG | 0.580983 | 1.1:+2076500 | MS.gene24284:CDS |
GCCGTCTATGGAGCTGAGGA+AGG | 0.583318 | 1.1:+2083014 | MS.gene24284:CDS |
TGGATGAGTTGCACAAAAGG+AGG | 0.584833 | 1.1:+2081885 | MS.gene24284:CDS |
AAATCCAGTAGCGAAAAGTT+GGG | 0.586529 | 1.1:+2078060 | MS.gene24284:CDS |
TTGCCGGTAAAGCACCTTCG+AGG | 0.590223 | 1.1:+2076691 | MS.gene24284:CDS |
AAGAATTTATACTCCGGCGG+TGG | 0.594684 | 1.1:-2076291 | None:intergenic |
CAGTGTAGATGCCGGAACAA+AGG | 0.595194 | 1.1:+2082066 | MS.gene24284:CDS |
AATATGATTAAACAAATGAA+AGG | 0.595549 | 1.1:+2078139 | MS.gene24284:CDS |
GTGGTGTCAAGATTTGTAGA+TGG | 0.595777 | 1.1:+2077366 | MS.gene24284:CDS |
GAAGAAGTAGAAGGTTGTGG+CGG | 0.596045 | 1.1:-2076022 | None:intergenic |
AGATTTGCGGTATTCGGTGT+CGG | 0.597906 | 1.1:+2076378 | MS.gene24284:CDS |
TGATGAAGAAGAGTCTGATG+AGG | 0.598927 | 1.1:+2076629 | MS.gene24284:CDS |
TGTGAAACGGATGAAGGCGT+TGG | 0.600791 | 1.1:+2076446 | MS.gene24284:CDS |
ACACGAGTGAACATGCTCAC+AGG | 0.600820 | 1.1:-2082768 | None:intergenic |
ATCCTTTCACAAGGGTCAGG+CGG | 0.604119 | 1.1:-2082455 | None:intergenic |
GTCTATGGAGCTGAGGAAGG+TGG | 0.604936 | 1.1:+2083017 | MS.gene24284:CDS |
ATGCAAGGTTGTTTGAGGTG+AGG | 0.606431 | 1.1:-2076176 | None:intergenic |
CTTTCACGTCGGCATGCCAA+GGG | 0.607070 | 1.1:-2082697 | None:intergenic |
TTATATGTCAGTGTAGATGC+CGG | 0.607545 | 1.1:+2082058 | MS.gene24284:CDS |
TGTTTGAGGTGAGGAAACGG+TGG | 0.612358 | 1.1:-2076167 | None:intergenic |
CCCGACTTCATTGAAATCAA+GGG | 0.615860 | 1.1:+2082528 | MS.gene24284:CDS |
ACCTCGGAGCGATTAACTGA+AGG | 0.618092 | 1.1:+2081791 | MS.gene24284:CDS |
CTTGCATTCGACATCATCGA+TGG | 0.618944 | 1.1:+2076192 | MS.gene24284:CDS |
GCTCCATAGACGGCCCAGGA+TGG | 0.619796 | 1.1:-2083005 | None:intergenic |
TCCCAGAAATCTCCAAAGAG+TGG | 0.620464 | 1.1:-2082112 | None:intergenic |
GGGGAAGGAGATGTTGATGG+TGG | 0.624176 | 1.1:+2076492 | MS.gene24284:CDS |
ATACTGAAAGGTGTTGATGA+TGG | 0.624454 | 1.1:+2076561 | MS.gene24284:CDS |
AGTAGCGAAAAGTTGGGTGT+GGG | 0.624662 | 1.1:+2078066 | MS.gene24284:CDS |
CTGGGCCGTCTATGGAGCTG+AGG | 0.625153 | 1.1:+2083010 | MS.gene24284:CDS |
TAACGAGATGATTCCGTTGG+GGG | 0.625747 | 1.1:+2076473 | MS.gene24284:CDS |
TTGTGGCGGAGAAGAGAGCG+AGG | 0.627299 | 1.1:-2076008 | None:intergenic |
GTAGCCACCAGCTTCCTCGA+AGG | 0.629332 | 1.1:-2076705 | None:intergenic |
AAGATTATTGGTTCACACAG+TGG | 0.629945 | 1.1:+2077347 | MS.gene24284:CDS |
ACCTTCCTCAGCTCCATAGA+CGG | 0.630071 | 1.1:-2083015 | None:intergenic |
TTGGTAAGGAGATTGTGAAA+CGG | 0.632862 | 1.1:+2076433 | MS.gene24284:CDS |
ATAGACGGCCCAGGATGGTG+TGG | 0.635119 | 1.1:-2083000 | None:intergenic |
TTGGCTTGCGGAGAGTTCGG+AGG | 0.639532 | 1.1:+2076320 | MS.gene24284:CDS |
TACCGCCTGACCCTTGTGAA+AGG | 0.639713 | 1.1:+2082453 | MS.gene24284:CDS |
ATTTGCACATGCCAAGCTAG+GGG | 0.639964 | 1.1:-2078008 | None:intergenic |
AGTTCAAAATTGATGGCCAG+TGG | 0.640034 | 1.1:+2082816 | MS.gene24284:CDS |
CTGAAAGGTGTTGATGATGG+TGG | 0.640774 | 1.1:+2076564 | MS.gene24284:CDS |
TGATTTGGAGAATGCTGAGG+AGG | 0.642559 | 1.1:+2076587 | MS.gene24284:CDS |
TTATGAGTGAAATAGGTGCA+TGG | 0.642687 | 1.1:+2077979 | MS.gene24284:intron |
GTATTCGGTGTCGGTAGTGG+AGG | 0.643075 | 1.1:+2076387 | MS.gene24284:CDS |
TAAGGAGAAGCGTTTCCTTG+GGG | 0.648137 | 1.1:-2076239 | None:intergenic |
AGAGATAATGCACAATGCCG+TGG | 0.654133 | 1.1:-2081821 | None:intergenic |
GTAACGAGATGATTCCGTTG+GGG | 0.654757 | 1.1:+2076472 | MS.gene24284:CDS |
AGCATTCCATCCTTTCACAA+GGG | 0.657631 | 1.1:-2082463 | None:intergenic |
GGAAGACGGAAAACCACCGC+CGG | 0.657646 | 1.1:+2076278 | MS.gene24284:CDS |
GAGAATGCTGAGGAGGAAAG+CGG | 0.660819 | 1.1:+2076594 | MS.gene24284:CDS |
TCACAGCTTCGAGGTCGAGG+TGG | 0.662705 | 1.1:+2077395 | MS.gene24284:CDS |
CATCGATGATGTCGAATGCA+AGG | 0.667846 | 1.1:-2076191 | None:intergenic |
AGCACCTTCGAGGAAGCTGG+TGG | 0.676170 | 1.1:+2076701 | MS.gene24284:CDS |
CTCCGAGAAAGCTTTCACGT+CGG | 0.679985 | 1.1:-2082708 | None:intergenic |
AAGGTTGTTGGAATACTGAA+AGG | 0.681691 | 1.1:+2076549 | MS.gene24284:CDS |
TCGGCGAAGAATTTATACTC+CGG | 0.685809 | 1.1:-2076297 | None:intergenic |
GCGAAGAATTTATACTCCGG+CGG | 0.686331 | 1.1:-2076294 | None:intergenic |
TAACTGAAGGCATGACACCA+CGG | 0.686690 | 1.1:+2081804 | MS.gene24284:CDS |
AAACGGATGAAGGCGTTGGG+TGG | 0.695210 | 1.1:+2076450 | MS.gene24284:CDS |
TGGTACTGATGAGAATGGCA+TGG | 0.701260 | 1.1:-2075971 | None:intergenic |
TGGTGATTTGGAGAATGCTG+AGG | 0.702453 | 1.1:+2076584 | MS.gene24284:CDS |
GCCTTCAGTTAATCGCTCCG+AGG | 0.710873 | 1.1:-2081792 | None:intergenic |
CGAACCCGAAGATCTCCCCA+AGG | 0.723663 | 1.1:+2076224 | MS.gene24284:CDS |
CGACGTGAAAGCTTTCTCGG+AGG | 0.740056 | 1.1:+2082709 | MS.gene24284:CDS |
TCTGTCTCTGAAAAGCCAAG+GGG | 0.741241 | 1.1:+2082733 | MS.gene24284:CDS |
TGAGTGAAATAGGTGCATGG+AGG | 0.759000 | 1.1:+2077982 | MS.gene24284:intron |
TTATGGTGAGAATTTCAATG+CGG | 0.771681 | 1.1:+2076410 | MS.gene24284:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 2075973 | 2083109 | 2075973 | ID=MS.gene24284 |
chr1.1 | mRNA | 2075973 | 2083109 | 2075973 | ID=MS.gene24284.t1;Parent=MS.gene24284 |
chr1.1 | exon | 2075973 | 2076806 | 2075973 | ID=MS.gene24284.t1.exon1;Parent=MS.gene24284.t1 |
chr1.1 | CDS | 2075973 | 2076806 | 2075973 | ID=cds.MS.gene24284.t1;Parent=MS.gene24284.t1 |
chr1.1 | exon | 2077341 | 2077456 | 2077341 | ID=MS.gene24284.t1.exon2;Parent=MS.gene24284.t1 |
chr1.1 | CDS | 2077341 | 2077456 | 2077341 | ID=cds.MS.gene24284.t1;Parent=MS.gene24284.t1 |
chr1.1 | exon | 2077994 | 2078169 | 2077994 | ID=MS.gene24284.t1.exon3;Parent=MS.gene24284.t1 |
chr1.1 | CDS | 2077994 | 2078169 | 2077994 | ID=cds.MS.gene24284.t1;Parent=MS.gene24284.t1 |
chr1.1 | exon | 2081786 | 2081976 | 2081786 | ID=MS.gene24284.t1.exon4;Parent=MS.gene24284.t1 |
chr1.1 | CDS | 2081786 | 2081976 | 2081786 | ID=cds.MS.gene24284.t1;Parent=MS.gene24284.t1 |
chr1.1 | exon | 2082058 | 2082144 | 2082058 | ID=MS.gene24284.t1.exon5;Parent=MS.gene24284.t1 |
chr1.1 | CDS | 2082058 | 2082144 | 2082058 | ID=cds.MS.gene24284.t1;Parent=MS.gene24284.t1 |
chr1.1 | exon | 2082411 | 2082568 | 2082411 | ID=MS.gene24284.t1.exon6;Parent=MS.gene24284.t1 |
chr1.1 | CDS | 2082411 | 2082568 | 2082411 | ID=cds.MS.gene24284.t1;Parent=MS.gene24284.t1 |
chr1.1 | exon | 2082664 | 2082874 | 2082664 | ID=MS.gene24284.t1.exon7;Parent=MS.gene24284.t1 |
chr1.1 | CDS | 2082664 | 2082874 | 2082664 | ID=cds.MS.gene24284.t1;Parent=MS.gene24284.t1 |
chr1.1 | exon | 2082957 | 2083109 | 2082957 | ID=MS.gene24284.t1.exon8;Parent=MS.gene24284.t1 |
chr1.1 | CDS | 2082957 | 2083109 | 2082957 | ID=cds.MS.gene24284.t1;Parent=MS.gene24284.t1 |
Gene Sequence |
Protein sequence |