Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023429.t1 | XP_013446579.1 | 98.7 | 469 | 6 | 0 | 1 | 469 | 1 | 469 | 2.10E-214 | 755 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023429.t1 | Q9BQ67 | 41.0 | 432 | 227 | 8 | 31 | 454 | 29 | 440 | 9.6e-67 | 255.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023429.t1 | A0A072TTT6 | 98.7 | 469 | 6 | 0 | 1 | 469 | 1 | 469 | 1.5e-214 | 755.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene27317 | MS.gene023429 | PPI |
MS.gene07852 | MS.gene023429 | PPI |
MS.gene53345 | MS.gene023429 | PPI |
MS.gene053297 | MS.gene023429 | PPI |
MS.gene023429 | MS.gene052717 | PPI |
MS.gene26959 | MS.gene023429 | PPI |
MS.gene011268 | MS.gene023429 | PPI |
MS.gene023429 | MS.gene24284 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023429.t1 | MTR_8g080700 | 98.934 | 469 | 5 | 0 | 1 | 469 | 1 | 469 | 0.0 | 960 |
MS.gene023429.t1 | MTR_5g024090 | 77.802 | 464 | 90 | 7 | 1 | 460 | 1 | 455 | 0.0 | 689 |
MS.gene023429.t1 | MTR_4g096880 | 29.262 | 393 | 214 | 12 | 52 | 428 | 29 | 373 | 2.95e-34 | 133 |
MS.gene023429.t1 | MTR_2g039250 | 30.218 | 321 | 182 | 10 | 155 | 450 | 151 | 454 | 1.06e-31 | 127 |
MS.gene023429.t1 | MTR_4g073080 | 30.100 | 299 | 174 | 9 | 157 | 450 | 109 | 377 | 9.08e-29 | 117 |
MS.gene023429.t1 | MTR_2g100090 | 27.246 | 334 | 185 | 12 | 155 | 450 | 110 | 423 | 1.82e-25 | 109 |
MS.gene023429.t1 | MTR_2g016160 | 25.974 | 231 | 144 | 8 | 216 | 432 | 99 | 316 | 3.33e-16 | 79.7 |
MS.gene023429.t1 | MTR_1g054300 | 33.766 | 154 | 91 | 6 | 236 | 389 | 339 | 481 | 1.85e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023429.t1 | AT2G19540 | 70.089 | 448 | 130 | 3 | 23 | 467 | 20 | 466 | 0.0 | 640 |
MS.gene023429.t1 | AT5G58230 | 28.894 | 398 | 209 | 11 | 52 | 428 | 29 | 373 | 3.11e-36 | 139 |
MS.gene023429.t1 | AT2G16780 | 29.114 | 316 | 191 | 8 | 146 | 450 | 92 | 385 | 7.21e-34 | 132 |
MS.gene023429.t1 | AT4G35050 | 29.114 | 316 | 191 | 9 | 146 | 450 | 93 | 386 | 3.90e-32 | 127 |
MS.gene023429.t1 | AT2G19520 | 28.440 | 327 | 183 | 10 | 155 | 450 | 157 | 463 | 1.31e-27 | 115 |
MS.gene023429.t1 | AT4G29730 | 27.950 | 322 | 181 | 10 | 155 | 445 | 137 | 438 | 1.22e-26 | 112 |
MS.gene023429.t1 | AT4G29730 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 6.15e-25 | 107 |
MS.gene023429.t1 | AT4G29730 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 6.15e-25 | 107 |
MS.gene023429.t1 | AT1G29260 | 28.108 | 185 | 114 | 6 | 216 | 394 | 98 | 269 | 1.25e-14 | 75.1 |
MS.gene023429.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 141 | 321 | 3.41e-12 | 68.2 |
MS.gene023429.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 3.66e-12 | 68.2 |
MS.gene023429.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 4.15e-12 | 67.8 |
MS.gene023429.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 84 | 264 | 5.13e-12 | 67.4 |
Find 122 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAAGTATCCAATATTTC+TGG | 0.186014 | 4.2:+14025468 | MS.gene023429:CDS |
CAGGAGCGTTTACTTGTTCT+TGG | 0.192683 | 4.2:-14028910 | None:intergenic |
CAGAATATGGGACCTTTCTT+TGG | 0.220480 | 4.2:+14028847 | MS.gene023429:intron |
ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 4.2:+14024404 | MS.gene023429:CDS |
AAATCTTCTTGGAATTCTAT+TGG | 0.257950 | 4.2:+14025441 | MS.gene023429:CDS |
CTGCCCAAGATGCACATATA+TGG | 0.270395 | 4.2:-14025775 | None:intergenic |
TGGATAAAAGCATTGCAATA+TGG | 0.287928 | 4.2:+14027790 | MS.gene023429:CDS |
CACACAGTGTATTTCATTAC+AGG | 0.300493 | 4.2:+14025026 | MS.gene023429:CDS |
TGTGTGCCAATGCAGTTCTT+TGG | 0.305295 | 4.2:-14029314 | None:intergenic |
TGCAATATGGGATACTCGTT+TGG | 0.310651 | 4.2:+14027803 | MS.gene023429:CDS |
GTGTGCCAATGCAGTTCTTT+GGG | 0.311930 | 4.2:-14029313 | None:intergenic |
AATCTTCTTGGAATTCTATT+GGG | 0.321921 | 4.2:+14025442 | MS.gene023429:CDS |
GGCGGCGGCGCCACAGGTTC+CGG | 0.327760 | 4.2:+14024291 | MS.gene023429:CDS |
CTGTCAGTATGTCCAGTAAA+AGG | 0.330541 | 4.2:-14027586 | None:intergenic |
GACATGAGCTCTCATCTTAA+TGG | 0.333584 | 4.2:+14027261 | MS.gene023429:CDS |
AGTTGGGGAGGCAGATCTTC+AGG | 0.338811 | 4.2:-14028929 | None:intergenic |
GACTGGAGTCCTCTTGTTCC+AGG | 0.347996 | 4.2:+14027378 | MS.gene023429:CDS |
GCAATATGGGATACTCGTTT+GGG | 0.354043 | 4.2:+14027804 | MS.gene023429:CDS |
TGCCGGTGGTCCTACTTTGC+AGG | 0.355683 | 4.2:+14025593 | MS.gene023429:CDS |
ACGTCTCTTCCCAGAAATAT+TGG | 0.357236 | 4.2:-14025478 | None:intergenic |
TTCGGCGGCGGCGGCGCCAC+AGG | 0.362085 | 4.2:+14024285 | MS.gene023429:CDS |
CCAAGGAGTTGATGCAGTTC+AGG | 0.373931 | 4.2:+14027311 | MS.gene023429:CDS |
CATTGGCACACACAGATTCC+TGG | 0.384701 | 4.2:+14029325 | MS.gene023429:CDS |
CCCAGGCTGAGAAATCTTCT+TGG | 0.387294 | 4.2:+14025430 | MS.gene023429:intron |
CTCACGAAGGTTGTATTAAC+CGG | 0.388862 | 4.2:+14025729 | MS.gene023429:CDS |
TGAAACTGATGACTCTGAAA+TGG | 0.392830 | 4.2:+14025518 | MS.gene023429:CDS |
ATCAACTCCTTGGACACCTT+CGG | 0.400128 | 4.2:-14027301 | None:intergenic |
CCTGGTGAATAAACAATAGT+TGG | 0.407860 | 4.2:-14028946 | None:intergenic |
TCGTGATCTCAGACTGCTTA+AGG | 0.409527 | 4.2:+14028028 | MS.gene023429:CDS |
GAGTCATCAGTTTCACGTTT+AGG | 0.409980 | 4.2:-14025510 | None:intergenic |
GGATAAAAGCATTGCAATAT+GGG | 0.421297 | 4.2:+14027791 | MS.gene023429:CDS |
ATGGGACCTTTCTTTGGAAA+AGG | 0.423598 | 4.2:+14028853 | MS.gene023429:CDS |
TGCCCAAGATGCACATATAT+GGG | 0.425064 | 4.2:-14025774 | None:intergenic |
CTGGTGAATAAACAATAGTT+GGG | 0.426771 | 4.2:-14028945 | None:intergenic |
TGTGCATCTTGGGCAGAATC+TGG | 0.430129 | 4.2:+14025782 | MS.gene023429:CDS |
GGCTAGTTGTATGTTGGCGT+CGG | 0.431422 | 4.2:+14027980 | MS.gene023429:CDS |
TCCCCATATATGTGCATCTT+GGG | 0.431645 | 4.2:+14025772 | MS.gene023429:CDS |
AGGAGCGTTTACTTGTTCTT+GGG | 0.432127 | 4.2:-14028909 | None:intergenic |
TTTGTGCCATGGAGCGTATC+CGG | 0.432906 | 4.2:-14025748 | None:intergenic |
TGAATCATCTTCGGCGGCGG+CGG | 0.433527 | 4.2:+14024276 | MS.gene023429:CDS |
GCAGTACATACTATCATTCC+AGG | 0.440018 | 4.2:-14029343 | None:intergenic |
TTAAAGTATCCAATATTTCT+GGG | 0.447355 | 4.2:+14025469 | MS.gene023429:CDS |
TCCACACGAAGCTTCTTCAT+TGG | 0.452856 | 4.2:+14028588 | MS.gene023429:CDS |
ATCCCCATATATGTGCATCT+TGG | 0.460743 | 4.2:+14025771 | MS.gene023429:CDS |
CCTGAACTGCATCAACTCCT+TGG | 0.464940 | 4.2:-14027311 | None:intergenic |
CCAACTATTGTTTATTCACC+AGG | 0.472482 | 4.2:+14028946 | MS.gene023429:CDS |
TGGATGTGATTGGATGCTTA+TGG | 0.478480 | 4.2:-14028555 | None:intergenic |
TTTGGAAAAGGACGAGGAAG+AGG | 0.483191 | 4.2:+14028865 | MS.gene023429:CDS |
GCTAGTTGTATGTTGGCGTC+GGG | 0.490510 | 4.2:+14027981 | MS.gene023429:CDS |
AAGGTGCTTTGAATATTTGA+AGG | 0.491981 | 4.2:-14029391 | None:intergenic |
TTGGCGTCGGGTAGTGATGA+TGG | 0.493276 | 4.2:+14027993 | MS.gene023429:CDS |
ATGAAGGCTATGCTATAGAC+TGG | 0.496426 | 4.2:+14027361 | MS.gene023429:CDS |
CCGGTAAAAGTGTGGCAACC+TGG | 0.501960 | 4.2:+14024310 | MS.gene023429:CDS |
TGAATGTATTGTCATGGAAC+AGG | 0.507712 | 4.2:+14027868 | MS.gene023429:CDS |
AATCCTTTGCCACAGAATAT+GGG | 0.508159 | 4.2:+14028835 | MS.gene023429:intron |
CTCCACTCAATGGATGTGAT+TGG | 0.514101 | 4.2:-14028565 | None:intergenic |
GTTCCAGGGAGGCTTGTATC+CGG | 0.514187 | 4.2:+14027393 | MS.gene023429:CDS |
GGCAGAATCTGGTCATGTGC+AGG | 0.520350 | 4.2:+14025793 | MS.gene023429:CDS |
CCTTTCTTTGGAAAAGGACG+AGG | 0.522730 | 4.2:+14028859 | MS.gene023429:CDS |
TTCTGGGAAGAGACGTGAGC+TGG | 0.529788 | 4.2:+14025485 | MS.gene023429:CDS |
GAAACGGAGTGAATCATCTT+CGG | 0.530490 | 4.2:+14024267 | MS.gene023429:intron |
GACGAAGAAGAAGGTGGTGC+CGG | 0.530693 | 4.2:+14025576 | MS.gene023429:CDS |
CGGCATAAAACATCGTCAAA+AGG | 0.531323 | 4.2:+14024120 | MS.gene023429:CDS |
GATAGTGAAGACGAAGAAGA+AGG | 0.533242 | 4.2:+14025567 | MS.gene023429:CDS |
GAGGGTGTTACCTGCAAAGT+AGG | 0.537218 | 4.2:-14025603 | None:intergenic |
GCAACCTGGTGTGGATAAGT+TGG | 0.537432 | 4.2:+14024324 | MS.gene023429:CDS |
ACAGAAACCGAAGGTGTCCA+AGG | 0.538288 | 4.2:+14027294 | MS.gene023429:CDS |
CAATAATAGTATTTATCTGT+GGG | 0.539902 | 4.2:+14027525 | MS.gene023429:CDS |
TTACCGGATACAAGCCTCCC+TGG | 0.543277 | 4.2:-14027396 | None:intergenic |
AAATTTAAGCACAAAGATGA+AGG | 0.546613 | 4.2:+14027345 | MS.gene023429:CDS |
TTCGTGTGGACTCCACTCAA+TGG | 0.553277 | 4.2:-14028575 | None:intergenic |
GAGTGAATCATCTTCGGCGG+CGG | 0.557113 | 4.2:+14024273 | MS.gene023429:CDS |
GCAATAATAGTATTTATCTG+TGG | 0.558281 | 4.2:+14027524 | MS.gene023429:CDS |
ATAGTATGTACTGCAGCAGA+TGG | 0.561830 | 4.2:+14029352 | MS.gene023429:CDS |
TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 4.2:-14027550 | None:intergenic |
TGGAGAGAATTGTAAGCAGA+AGG | 0.568749 | 4.2:-14024373 | None:intergenic |
ACAAGCCTCCCTGGAACAAG+AGG | 0.572225 | 4.2:-14027387 | None:intergenic |
TGTGCTTGAAAAGACGCAGC+TGG | 0.573745 | 4.2:-14027834 | None:intergenic |
AAGACCCCAAAGAACTGCAT+TGG | 0.573867 | 4.2:+14029308 | MS.gene023429:CDS |
TAGGTTGGCTAGTTGTATGT+TGG | 0.574859 | 4.2:+14027974 | MS.gene023429:intron |
GCCATCCAATATGAAAAGCA+TGG | 0.576629 | 4.2:-14024393 | None:intergenic |
TTTGAATATTTGAAGGCATG+AGG | 0.577378 | 4.2:-14029384 | None:intergenic |
TCTTCCAACTTATCCACACC+AGG | 0.583170 | 4.2:-14024328 | None:intergenic |
TGTGCCAATGCAGTTCTTTG+GGG | 0.585321 | 4.2:-14029312 | None:intergenic |
AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 4.2:+14027548 | MS.gene023429:CDS |
TTCTGTTCGAACTAAACCCA+TGG | 0.588801 | 4.2:-14024997 | None:intergenic |
AAAAGTGTGGCAACCTGGTG+TGG | 0.591077 | 4.2:+14024315 | MS.gene023429:CDS |
GTATTTCATTACAGGGACAC+AGG | 0.601861 | 4.2:+14025034 | MS.gene023429:CDS |
CTGATGTGAATGTATTGTCA+TGG | 0.604527 | 4.2:+14027862 | MS.gene023429:CDS |
TACCTGCAAAGTAGGACCAC+CGG | 0.605560 | 4.2:-14025595 | None:intergenic |
TTACGTAAGTTGATTATCAG+CGG | 0.605575 | 4.2:-14028620 | None:intergenic |
TGGCGTCGGGTAGTGATGAT+GGG | 0.605656 | 4.2:+14027994 | MS.gene023429:CDS |
TATTAACCGGATACGCTCCA+TGG | 0.608736 | 4.2:+14025742 | MS.gene023429:CDS |
ACACAGTGTATTTCATTACA+GGG | 0.609707 | 4.2:+14025027 | MS.gene023429:CDS |
GGAAAAGGACGAGGAAGAGG+AGG | 0.612345 | 4.2:+14028868 | MS.gene023429:CDS |
GAAGAAGAAGGTGGTGCCGG+TGG | 0.612395 | 4.2:+14025579 | MS.gene023429:CDS |
ACTGATGACTCTGAAATGGA+TGG | 0.615606 | 4.2:+14025522 | MS.gene023429:CDS |
CACAGGTTCCGGTAAAAGTG+TGG | 0.622299 | 4.2:+14024302 | MS.gene023429:CDS |
ACTGGAGTCCTCTTGTTCCA+GGG | 0.624385 | 4.2:+14027379 | MS.gene023429:CDS |
GTATTCAAAATGCGCTACCA+CGG | 0.630470 | 4.2:-14028533 | None:intergenic |
TGAATAAACAATAGTTGGGG+AGG | 0.631441 | 4.2:-14028941 | None:intergenic |
AAAGGCAAAGAGCAAGAACA+AGG | 0.634436 | 4.2:+14024138 | MS.gene023429:CDS |
ATCCAATCACATCCATTGAG+TGG | 0.634447 | 4.2:+14028563 | MS.gene023429:CDS |
GGAGTCCTCTTGTTCCAGGG+AGG | 0.636093 | 4.2:+14027382 | MS.gene023429:CDS |
TCATGCAGCTTCTGATGGCA+AGG | 0.636729 | 4.2:-14029410 | None:intergenic |
TGACTCTGAAATGGATGGTG+AGG | 0.638725 | 4.2:+14025527 | MS.gene023429:CDS |
GCCAATGAAGAAGCTTCGTG+TGG | 0.638913 | 4.2:-14028589 | None:intergenic |
TGAATAGGAAGGAGATTCCG+TGG | 0.641695 | 4.2:+14028516 | MS.gene023429:intron |
GTGTATCATGCAGCTTCTGA+TGG | 0.643240 | 4.2:-14029415 | None:intergenic |
TGGTGAGGATAGTGATAGCG+AGG | 0.651927 | 4.2:+14025542 | MS.gene023429:CDS |
GTAATGAAATACACTGTGTG+TGG | 0.652047 | 4.2:-14025023 | None:intergenic |
GCCCAAGATGCACATATATG+GGG | 0.653392 | 4.2:-14025773 | None:intergenic |
TTCACACCTACAGTTGCGGA+AGG | 0.659965 | 4.2:+14025703 | MS.gene023429:intron |
AACTAATTGAAGATGACTCG+CGG | 0.660356 | 4.2:+14024100 | None:intergenic |
TTTGTTCTTTACCTAAGACA+AGG | 0.662595 | 4.2:-14024415 | None:intergenic |
TGGTGAATAAACAATAGTTG+GGG | 0.666731 | 4.2:-14028944 | None:intergenic |
AGTGAAGACGAAGAAGAAGG+TGG | 0.675905 | 4.2:+14025570 | MS.gene023429:CDS |
ACGGAGTGAATCATCTTCGG+CGG | 0.677615 | 4.2:+14024270 | MS.gene023429:CDS |
CAATATGGGATACTCGTTTG+GGG | 0.693736 | 4.2:+14027805 | MS.gene023429:CDS |
TATGGGATACTCGTTTGGGG+AGG | 0.701784 | 4.2:+14027808 | MS.gene023429:CDS |
CTAGCAGAGACAGAAACCGA+AGG | 0.726742 | 4.2:+14027285 | MS.gene023429:CDS |
TTGCGGAAGGTAACTCACGA+AGG | 0.747550 | 4.2:+14025716 | MS.gene023429:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTAAATATATCTAATCA+AGG | - | chr4.2:14029250-14029269 | None:intergenic | 10.0% |
!! | AATAACAAAAACAAAATAGT+CGG | - | chr4.2:14028468-14028487 | None:intergenic | 15.0% |
!! | AATATTATCTATACTAATGT+TGG | - | chr4.2:14026777-14026796 | None:intergenic | 15.0% |
!! | ATTTCAAAGATTAACTTATA+AGG | - | chr4.2:14026677-14026696 | None:intergenic | 15.0% |
!!! | AAGTTCATTATTTTTTGAAT+AGG | + | chr4.2:14028501-14028520 | MS.gene023429:intron | 15.0% |
!!! | ATAAGTTAATCTTTGAAATA+TGG | + | chr4.2:14026678-14026697 | MS.gene023429:intron | 15.0% |
!!! | CAACATATTGAAATTTTTTA+AGG | + | chr4.2:14027081-14027100 | MS.gene023429:intron | 15.0% |
!!! | TCATGATTTATTTTTTGTTT+GGG | + | chr4.2:14024943-14024962 | MS.gene023429:intron | 15.0% |
!!! | TTTTGAAAAAATTGAAGAAA+CGG | + | chr4.2:14024251-14024270 | MS.gene023429:intron | 15.0% |
!! | AAGTAAAAATTCATATGAAG+AGG | - | chr4.2:14025625-14025644 | None:intergenic | 20.0% |
!! | AATCCAAAGTAAGAAAAATA+AGG | - | chr4.2:14028801-14028820 | None:intergenic | 20.0% |
!! | AGTAAAAATTCATATGAAGA+GGG | - | chr4.2:14025624-14025643 | None:intergenic | 20.0% |
!! | ATAAATCCCTGAAATTTATT+AGG | - | chr4.2:14028698-14028717 | None:intergenic | 20.0% |
!! | CAATAATAGTATTTATCTGT+GGG | + | chr4.2:14027525-14027544 | MS.gene023429:CDS | 20.0% |
!! | TAATGATGTAATATGCTATT+AGG | - | chr4.2:14028254-14028273 | None:intergenic | 20.0% |
!! | TATAGTACTAAACAAACTAT+GGG | - | chr4.2:14026704-14026723 | None:intergenic | 20.0% |
!! | TGTGAAACATATGTATAAAA+TGG | + | chr4.2:14026641-14026660 | MS.gene023429:intron | 20.0% |
!! | TTATAGTACTAAACAAACTA+TGG | - | chr4.2:14026705-14026724 | None:intergenic | 20.0% |
!! | TTGAACAAAAATATACAACT+CGG | - | chr4.2:14027208-14027227 | None:intergenic | 20.0% |
!!! | AGAAAGTTTACAATTTTGTA+TGG | - | chr4.2:14028092-14028111 | None:intergenic | 20.0% |
!!! | CATGATTTATTTTTTGTTTG+GGG | + | chr4.2:14024944-14024963 | MS.gene023429:intron | 20.0% |
!!! | GAGTTAATTTTTTTAATCGA+CGG | + | chr4.2:14025884-14025903 | MS.gene023429:intron | 20.0% |
!!! | GTCATGATTTATTTTTTGTT+TGG | + | chr4.2:14024942-14024961 | MS.gene023429:intron | 20.0% |
!!! | TAGAATTTTTTGTCCTTTAA+TGG | + | chr4.2:14025191-14025210 | MS.gene023429:intron | 20.0% |
!!! | TAGTATAGATAATATTTCTG+CGG | + | chr4.2:14026781-14026800 | MS.gene023429:intron | 20.0% |
!!! | TCATTATTTTTTGAATAGGA+AGG | + | chr4.2:14028505-14028524 | MS.gene023429:intron | 20.0% |
!!! | TTAAAGTATCCAATATTTCT+GGG | + | chr4.2:14025469-14025488 | MS.gene023429:CDS | 20.0% |
!!! | TTAAGGTTCTTAAATTTTAG+CGG | + | chr4.2:14027098-14027117 | MS.gene023429:intron | 20.0% |
!!! | TTTAAAGTATCCAATATTTC+TGG | + | chr4.2:14025468-14025487 | MS.gene023429:CDS | 20.0% |
!!! | TTTGTATGGTTTTTCTATAT+GGG | - | chr4.2:14028078-14028097 | None:intergenic | 20.0% |
!!! | TTTTGTATGGTTTTTCTATA+TGG | - | chr4.2:14028079-14028098 | None:intergenic | 20.0% |
! | AAAACTCAAAAGTCCATTAA+AGG | - | chr4.2:14025207-14025226 | None:intergenic | 25.0% |
! | AAATCTTCTTGGAATTCTAT+TGG | + | chr4.2:14025441-14025460 | MS.gene023429:CDS | 25.0% |
! | AAATTTAAGCACAAAGATGA+AGG | + | chr4.2:14027345-14027364 | MS.gene023429:CDS | 25.0% |
! | AAGAATTATGACATTGTGAT+TGG | + | chr4.2:14024743-14024762 | MS.gene023429:intron | 25.0% |
! | AATCATTCAACTGTTAATGT+GGG | - | chr4.2:14026376-14026395 | None:intergenic | 25.0% |
! | AATCTTCTTGGAATTCTATT+GGG | + | chr4.2:14025442-14025461 | MS.gene023429:CDS | 25.0% |
! | AATGAAATACAACAGATATG+AGG | - | chr4.2:14027946-14027965 | None:intergenic | 25.0% |
! | ACGAATTCCTAATAAATTTC+AGG | + | chr4.2:14028688-14028707 | MS.gene023429:intron | 25.0% |
! | ATAATTCAATGTAGTCACTT+GGG | + | chr4.2:14024636-14024655 | MS.gene023429:intron | 25.0% |
! | CATATTTCATACTATGTTAG+TGG | + | chr4.2:14025970-14025989 | MS.gene023429:intron | 25.0% |
! | CGAATTCCTAATAAATTTCA+GGG | + | chr4.2:14028689-14028708 | MS.gene023429:intron | 25.0% |
! | CGTAATAAATTTGTAGATCT+GGG | + | chr4.2:14027239-14027258 | MS.gene023429:intron | 25.0% |
! | GCAATAATAGTATTTATCTG+TGG | + | chr4.2:14027524-14027543 | MS.gene023429:CDS | 25.0% |
! | GTTTCTCTCATATTATCTTT+GGG | + | chr4.2:14028721-14028740 | MS.gene023429:intron | 25.0% |
! | TAAATTTAGCTACATGATTG+TGG | + | chr4.2:14026562-14026581 | MS.gene023429:intron | 25.0% |
! | TAACAGCAAAATTACTGTAT+AGG | + | chr4.2:14028119-14028138 | MS.gene023429:intron | 25.0% |
! | TAATATGCTATTAGGACATA+AGG | - | chr4.2:14028246-14028265 | None:intergenic | 25.0% |
! | TAGAATGTATAAGATTGAAG+TGG | + | chr4.2:14026533-14026552 | MS.gene023429:intron | 25.0% |
! | TCAAAATGACAAAATATGTG+TGG | - | chr4.2:14026489-14026508 | None:intergenic | 25.0% |
! | TCAACTTACGTAAGTAAATA+CGG | + | chr4.2:14028630-14028649 | MS.gene023429:intron | 25.0% |
! | TCATTGTCAAAGTAGATATA+AGG | + | chr4.2:14027469-14027488 | MS.gene023429:intron | 25.0% |
! | TGTTTCTCTCATATTATCTT+TGG | + | chr4.2:14028720-14028739 | MS.gene023429:intron | 25.0% |
! | TTATCTATACTAATGTTGGT+AGG | - | chr4.2:14026773-14026792 | None:intergenic | 25.0% |
!! | AGCTTTTGTATAATGAAAGA+AGG | - | chr4.2:14029189-14029208 | None:intergenic | 25.0% |
!! | ATTGAAAAAACTCCTTTTAC+TGG | + | chr4.2:14027574-14027593 | MS.gene023429:CDS | 25.0% |
!! | TCTTGTGTGTTTTCTTTTAT+AGG | + | chr4.2:14025072-14025091 | MS.gene023429:intron | 25.0% |
!! | TTAAACTATGAGCAACTTTT+TGG | - | chr4.2:14025937-14025956 | None:intergenic | 25.0% |
!! | TTCAAGTTAAAGGAAATAAG+AGG | - | chr4.2:14029277-14029296 | None:intergenic | 25.0% |
!! | TTGTGCTTAAATTTTTGTAG+TGG | - | chr4.2:14027339-14027358 | None:intergenic | 25.0% |
!!! | AATAAAACCCATTATTTTGC+TGG | + | chr4.2:14024470-14024489 | MS.gene023429:intron | 25.0% |
!!! | ATTCTGCTTTTTATTTTCTG+TGG | + | chr4.2:14024207-14024226 | MS.gene023429:intron | 25.0% |
!!! | ATTTCCTTTAACTTGAAACA+GGG | + | chr4.2:14029280-14029299 | MS.gene023429:intron | 25.0% |
!!! | GGACTTTATTGTTTTTGTTA+TGG | + | chr4.2:14026587-14026606 | MS.gene023429:intron | 25.0% |
!!! | TATTTCCTTTAACTTGAAAC+AGG | + | chr4.2:14029279-14029298 | MS.gene023429:intron | 25.0% |
!!! | TTCTGCTTTTTATTTTCTGT+GGG | + | chr4.2:14024208-14024227 | MS.gene023429:intron | 25.0% |
!!! | TTGAACCAAGTTATTTCTAT+TGG | + | chr4.2:14026119-14026138 | MS.gene023429:intron | 25.0% |
!!! | TTTTTCTTGTTTCAATGTTG+TGG | + | chr4.2:14026152-14026171 | MS.gene023429:intron | 25.0% |
AAAATAAGCCCAATGATTAC+CGG | - | chr4.2:14027415-14027434 | None:intergenic | 30.0% | |
AAAGCTAGTAAAACATGACT+AGG | - | chr4.2:14025354-14025373 | None:intergenic | 30.0% | |
AACAAAAACAAAATAGTCGG+CGG | - | chr4.2:14028465-14028484 | None:intergenic | 30.0% | |
AACCTAGCTTATACTCAAAT+AGG | - | chr4.2:14029117-14029136 | None:intergenic | 30.0% | |
AATAAAGTGCGAGATCAAAA+GGG | - | chr4.2:14024190-14024209 | None:intergenic | 30.0% | |
ACACAGTGTATTTCATTACA+GGG | + | chr4.2:14025027-14025046 | MS.gene023429:CDS | 30.0% | |
ACTTCTTTGATAGAAAGAGA+TGG | - | chr4.2:14027165-14027184 | None:intergenic | 30.0% | |
AGGATAAATTATTCTGTTCC+AGG | + | chr4.2:14026870-14026889 | MS.gene023429:intron | 30.0% | |
ATCATTCAACTGTTAATGTG+GGG | - | chr4.2:14026375-14026394 | None:intergenic | 30.0% | |
ATGTTGATCTTCATGTTTGT+AGG | + | chr4.2:14027496-14027515 | MS.gene023429:intron | 30.0% | |
ATGTTGCAATTGCAATACTT+AGG | - | chr4.2:14026935-14026954 | None:intergenic | 30.0% | |
CAATCATTCAACTGTTAATG+TGG | - | chr4.2:14026377-14026396 | None:intergenic | 30.0% | |
CATAATTCAATGTAGTCACT+TGG | + | chr4.2:14024635-14024654 | MS.gene023429:intron | 30.0% | |
CTGATCCAATAGAAATAACT+TGG | - | chr4.2:14026127-14026146 | None:intergenic | 30.0% | |
CTGGTGAATAAACAATAGTT+GGG | - | chr4.2:14028948-14028967 | None:intergenic | 30.0% | |
CTTAGTAGAACATTGTCAAA+GGG | - | chr4.2:14026329-14026348 | None:intergenic | 30.0% | |
GATAACTCCAGCAAAATAAT+GGG | - | chr4.2:14024480-14024499 | None:intergenic | 30.0% | |
GATGCTTTAATTGTCTTATC+TGG | + | chr4.2:14028197-14028216 | MS.gene023429:intron | 30.0% | |
GCGTAATAAATTTGTAGATC+TGG | + | chr4.2:14027238-14027257 | MS.gene023429:intron | 30.0% | |
GCTTTAACCAAACATTTACT+TGG | - | chr4.2:14025851-14025870 | None:intergenic | 30.0% | |
GTAAGAAAAATAAGGCAGTT+TGG | - | chr4.2:14028793-14028812 | None:intergenic | 30.0% | |
GTAGTAAATGAGCCATTATT+TGG | + | chr4.2:14025994-14026013 | MS.gene023429:intron | 30.0% | |
TAGAATGAAAATTGAGTCGA+TGG | - | chr4.2:14027918-14027937 | None:intergenic | 30.0% | |
TCCTTCAAAAATGCATTTCT+GGG | - | chr4.2:14028363-14028382 | None:intergenic | 30.0% | |
TCTTAGTAGAACATTGTCAA+AGG | - | chr4.2:14026330-14026349 | None:intergenic | 30.0% | |
TGATAACTCCAGCAAAATAA+TGG | - | chr4.2:14024481-14024500 | None:intergenic | 30.0% | |
TGGTGAATAAACAATAGTTG+GGG | - | chr4.2:14028947-14028966 | None:intergenic | 30.0% | |
TGTATTTCATTGTACTGAGT+AGG | + | chr4.2:14027955-14027974 | MS.gene023429:intron | 30.0% | |
TGTCATAATTCTTGTGAAAG+AGG | - | chr4.2:14024736-14024755 | None:intergenic | 30.0% | |
TGTTGATCTTCATGTTTGTA+GGG | + | chr4.2:14027497-14027516 | MS.gene023429:intron | 30.0% | |
TTCCTTCAAAAATGCATTTC+TGG | - | chr4.2:14028364-14028383 | None:intergenic | 30.0% | |
TTTCACAATTAATGTCTGCA+TGG | - | chr4.2:14026628-14026647 | None:intergenic | 30.0% | |
TTTGTTCTTTACCTAAGACA+AGG | - | chr4.2:14024418-14024437 | None:intergenic | 30.0% | |
! | AAGGTGCTTTGAATATTTGA+AGG | - | chr4.2:14029394-14029413 | None:intergenic | 30.0% |
! | AGGAACTTTTTATCGGAAAA+TGG | - | chr4.2:14028226-14028245 | None:intergenic | 30.0% |
! | AGTTGATCTTACTGACATTT+TGG | + | chr4.2:14025675-14025694 | MS.gene023429:intron | 30.0% |
! | GGACATAAGGAACTTTTTAT+CGG | - | chr4.2:14028233-14028252 | None:intergenic | 30.0% |
! | TATTGCAATGCTTTTATCCA+CGG | - | chr4.2:14027790-14027809 | None:intergenic | 30.0% |
! | TGACATAGAATTGGTAACAT+TGG | - | chr4.2:14024769-14024788 | None:intergenic | 30.0% |
! | TTTGAATATTTGAAGGCATG+AGG | - | chr4.2:14029387-14029406 | None:intergenic | 30.0% |
!! | AGTATCTCGTTTGATTTGAT+AGG | + | chr4.2:14026850-14026869 | MS.gene023429:intron | 30.0% |
!! | AGTTATTTCTATTGGATCAG+AGG | + | chr4.2:14026127-14026146 | MS.gene023429:intron | 30.0% |
!! | GGATAAAAGCATTGCAATAT+GGG | + | chr4.2:14027791-14027810 | MS.gene023429:CDS | 30.0% |
!! | GTAACGGAAAAGTTGATATT+GGG | + | chr4.2:14025148-14025167 | MS.gene023429:intron | 30.0% |
!! | GTTATTTCTATTGGATCAGA+GGG | + | chr4.2:14026128-14026147 | MS.gene023429:intron | 30.0% |
!! | TGGATAAAAGCATTGCAATA+TGG | + | chr4.2:14027790-14027809 | MS.gene023429:CDS | 30.0% |
!! | TTACGTAAGTTGATTATCAG+CGG | - | chr4.2:14028623-14028642 | None:intergenic | 30.0% |
!!! | AGTTTTAAAAACCCTATGAC+TGG | + | chr4.2:14025818-14025837 | MS.gene023429:intron | 30.0% |
!!! | CTGCCTTATTTTTCTTACTT+TGG | + | chr4.2:14028795-14028814 | MS.gene023429:intron | 30.0% |
!!! | GAATGTTGTTATTTTGCCAT+GGG | + | chr4.2:14026270-14026289 | MS.gene023429:intron | 30.0% |
!!! | TGAATGTTGTTATTTTGCCA+TGG | + | chr4.2:14026269-14026288 | MS.gene023429:intron | 30.0% |
AAAGTGAGTATTTGAGAGCT+TGG | + | chr4.2:14026410-14026429 | MS.gene023429:intron | 35.0% | |
AAGCAAACGCACAAAAATTG+TGG | - | chr4.2:14024890-14024909 | None:intergenic | 35.0% | |
AATCCTTTGCCACAGAATAT+GGG | + | chr4.2:14028835-14028854 | MS.gene023429:intron | 35.0% | |
ACACTGAAATGTTCCGAAAA+AGG | - | chr4.2:14027653-14027672 | None:intergenic | 35.0% | |
ACCAAACATTTACTTGGCTA+AGG | - | chr4.2:14025845-14025864 | None:intergenic | 35.0% | |
ACTGTTCATTACCGATCAAA+TGG | + | chr4.2:14025124-14025143 | MS.gene023429:intron | 35.0% | |
AGCCTATTTGAGTATAAGCT+AGG | + | chr4.2:14029112-14029131 | MS.gene023429:intron | 35.0% | |
ATAGCACAAAGGATTCACAA+TGG | + | chr4.2:14026179-14026198 | MS.gene023429:intron | 35.0% | |
CAAAAACATGAGGTTCTGTA+GGG | - | chr4.2:14027758-14027777 | None:intergenic | 35.0% | |
CACACAGTGTATTTCATTAC+AGG | + | chr4.2:14025026-14025045 | MS.gene023429:CDS | 35.0% | |
CATGCAACATATTATCAACG+AGG | - | chr4.2:14025407-14025426 | None:intergenic | 35.0% | |
CCAACTATTGTTTATTCACC+AGG | + | chr4.2:14028946-14028965 | MS.gene023429:CDS | 35.0% | |
CCTGGTGAATAAACAATAGT+TGG | - | chr4.2:14028949-14028968 | None:intergenic | 35.0% | |
CTAATCAAGGAGTTCTATCA+TGG | - | chr4.2:14029237-14029256 | None:intergenic | 35.0% | |
CTGATGTGAATGTATTGTCA+TGG | + | chr4.2:14027862-14027881 | MS.gene023429:CDS | 35.0% | |
CTGGAGTTATCACTGTTAAA+TGG | + | chr4.2:14024489-14024508 | MS.gene023429:intron | 35.0% | |
CTGTTCATTACCGATCAAAT+GGG | + | chr4.2:14025125-14025144 | MS.gene023429:intron | 35.0% | |
CTTGGGTAATGACAAAATCT+GGG | - | chr4.2:14026303-14026322 | None:intergenic | 35.0% | |
GAATAAAGTGCGAGATCAAA+AGG | - | chr4.2:14024191-14024210 | None:intergenic | 35.0% | |
GATACGACAGAAAAGTTGAA+GGG | - | chr4.2:14026022-14026041 | None:intergenic | 35.0% | |
GCAAAGTGATTCAAATTACC+TGG | - | chr4.2:14028967-14028986 | None:intergenic | 35.0% | |
GTAATGAAATACACTGTGTG+TGG | - | chr4.2:14025026-14025045 | None:intergenic | 35.0% | |
GTTGATCTTCATGTTTGTAG+GGG | + | chr4.2:14027498-14027517 | MS.gene023429:intron | 35.0% | |
TAATCCTTTGCCACAGAATA+TGG | + | chr4.2:14028834-14028853 | MS.gene023429:intron | 35.0% | |
TAGCACAAAGGATTCACAAT+GGG | + | chr4.2:14026180-14026199 | MS.gene023429:intron | 35.0% | |
TATTTGCAGAGTCCATGAAA+GGG | - | chr4.2:14028752-14028771 | None:intergenic | 35.0% | |
TCATAGCTCTTGAATTGCAA+TGG | - | chr4.2:14024557-14024576 | None:intergenic | 35.0% | |
TCATTCAACTGTTAATGTGG+GGG | - | chr4.2:14026374-14026393 | None:intergenic | 35.0% | |
TCCTTAGCCAAGTAAATGTT+TGG | + | chr4.2:14025841-14025860 | MS.gene023429:intron | 35.0% | |
TCTTTCCTACATGCTATTAG+TGG | + | chr4.2:14026045-14026064 | MS.gene023429:intron | 35.0% | |
TGAATAAACAATAGTTGGGG+AGG | - | chr4.2:14028944-14028963 | None:intergenic | 35.0% | |
TGAATGTATTGTCATGGAAC+AGG | + | chr4.2:14027868-14027887 | MS.gene023429:CDS | 35.0% | |
TGATACGACAGAAAAGTTGA+AGG | - | chr4.2:14026023-14026042 | None:intergenic | 35.0% | |
TGTCTCATGAATCATCTTGA+AGG | + | chr4.2:14025096-14025115 | MS.gene023429:intron | 35.0% | |
TGTTCATTACCGATCAAATG+GGG | + | chr4.2:14025126-14025145 | MS.gene023429:intron | 35.0% | |
TTATTTGCAGAGTCCATGAA+AGG | - | chr4.2:14028753-14028772 | None:intergenic | 35.0% | |
TTTAGCTACATGATTGTGGT+TGG | + | chr4.2:14026566-14026585 | MS.gene023429:intron | 35.0% | |
TTTCATTGTACTGAGTAGGT+TGG | + | chr4.2:14027959-14027978 | MS.gene023429:intron | 35.0% | |
! | ACCCAGAAATGCATTTTTGA+AGG | + | chr4.2:14028359-14028378 | MS.gene023429:intron | 35.0% |
! | ATTGGTGACATTGGTAACAT+TGG | + | chr4.2:14024679-14024698 | MS.gene023429:intron | 35.0% |
! | CAGGTATAATTTTTGCCCTT+GGG | + | chr4.2:14026889-14026908 | MS.gene023429:intron | 35.0% |
! | GATATTTTACGTGACACCAT+GGG | + | chr4.2:14024981-14025000 | MS.gene023429:CDS | 35.0% |
! | GGTTTTTCTATATGGGCAAA+GGG | - | chr4.2:14028071-14028090 | None:intergenic | 35.0% |
! | GTTTTTCTATATGGGCAAAG+GGG | - | chr4.2:14028070-14028089 | None:intergenic | 35.0% |
! | TCCATGCTTTTCATATTGGA+TGG | + | chr4.2:14024392-14024411 | MS.gene023429:CDS | 35.0% |
! | TCTAATGAGTTGAAGTTTGC+TGG | + | chr4.2:14026510-14026529 | MS.gene023429:intron | 35.0% |
! | TCTCTCCATGCTTTTCATAT+TGG | + | chr4.2:14024388-14024407 | MS.gene023429:CDS | 35.0% |
! | TGAAACTGATGACTCTGAAA+TGG | + | chr4.2:14025518-14025537 | MS.gene023429:CDS | 35.0% |
! | TGACATAGAATTGGTGACAT+TGG | + | chr4.2:14024670-14024689 | MS.gene023429:intron | 35.0% |
! | TGGTTTTTCTATATGGGCAA+AGG | - | chr4.2:14028072-14028091 | None:intergenic | 35.0% |
!! | ATACTAGCTCTGAACTTTGT+CGG | - | chr4.2:14026835-14026854 | None:intergenic | 35.0% |
!! | GGTAACGGAAAAGTTGATAT+TGG | + | chr4.2:14025147-14025166 | MS.gene023429:intron | 35.0% |
!! | TTAAATTTTAGCGGCAGCTA+AGG | + | chr4.2:14027107-14027126 | MS.gene023429:intron | 35.0% |
!! | TTGTCCCTGTTTCAAGTTAA+AGG | - | chr4.2:14029287-14029306 | None:intergenic | 35.0% |
!!! | AGGTATTCAGCATTGACTTT+TGG | + | chr4.2:14027888-14027907 | MS.gene023429:intron | 35.0% |
!!! | GCAAATTGCACTGATTGTTT+TGG | + | chr4.2:14026244-14026263 | MS.gene023429:intron | 35.0% |
AAAGGCAAAGAGCAAGAACA+AGG | + | chr4.2:14024138-14024157 | MS.gene023429:CDS | 40.0% | |
AACATTGTCAAAGGGATGCT+TGG | - | chr4.2:14026321-14026340 | None:intergenic | 40.0% | |
AAGAAAGGTCCCATATTCTG+TGG | - | chr4.2:14028847-14028866 | None:intergenic | 40.0% | |
AAGGAACTTCTAGATGCACT+TGG | + | chr4.2:14028378-14028397 | MS.gene023429:intron | 40.0% | |
ACATTGTCAAAGGGATGCTT+GGG | - | chr4.2:14026320-14026339 | None:intergenic | 40.0% | |
ACGTCTCTTCCCAGAAATAT+TGG | - | chr4.2:14025481-14025500 | None:intergenic | 40.0% | |
AGAGCTTGGAATTGTAACTG+AGG | + | chr4.2:14026424-14026443 | MS.gene023429:intron | 40.0% | |
AGGATTCACAATGGGAATAG+AGG | + | chr4.2:14026188-14026207 | MS.gene023429:intron | 40.0% | |
AGTAACCTCATTTGTACCCA+AGG | - | chr4.2:14026908-14026927 | None:intergenic | 40.0% | |
ATACCGACACTTCTGATTGA+AGG | - | chr4.2:14024842-14024861 | None:intergenic | 40.0% | |
ATAGTATGTACTGCAGCAGA+TGG | + | chr4.2:14029352-14029371 | MS.gene023429:CDS | 40.0% | |
ATCCAATCACATCCATTGAG+TGG | + | chr4.2:14028563-14028582 | MS.gene023429:CDS | 40.0% | |
ATCCCCATATATGTGCATCT+TGG | + | chr4.2:14025771-14025790 | MS.gene023429:CDS | 40.0% | |
ATGAAGGCTATGCTATAGAC+TGG | + | chr4.2:14027361-14027380 | MS.gene023429:CDS | 40.0% | |
CAATATGGGATACTCGTTTG+GGG | + | chr4.2:14027805-14027824 | MS.gene023429:CDS | 40.0% | |
CAGAATATGGGACCTTTCTT+TGG | + | chr4.2:14028847-14028866 | MS.gene023429:intron | 40.0% | |
CCAAGGGCAAAAATTATACC+TGG | - | chr4.2:14026891-14026910 | None:intergenic | 40.0% | |
CGGCATAAAACATCGTCAAA+AGG | + | chr4.2:14024120-14024139 | MS.gene023429:CDS | 40.0% | |
CTCACGAAGGTTGTATTAAC+CGG | + | chr4.2:14025729-14025748 | MS.gene023429:CDS | 40.0% | |
CTGTCAGTATGTCCAGTAAA+AGG | - | chr4.2:14027589-14027608 | None:intergenic | 40.0% | |
GAAACGGAGTGAATCATCTT+CGG | + | chr4.2:14024267-14024286 | MS.gene023429:intron | 40.0% | |
GAATTCGTCCAACAATTCTG+TGG | - | chr4.2:14028676-14028695 | None:intergenic | 40.0% | |
GACATGAGCTCTCATCTTAA+TGG | + | chr4.2:14027261-14027280 | MS.gene023429:CDS | 40.0% | |
GAGCAAGAAGCAAAAACATG+AGG | - | chr4.2:14027768-14027787 | None:intergenic | 40.0% | |
GAGTCATCAGTTTCACGTTT+AGG | - | chr4.2:14025513-14025532 | None:intergenic | 40.0% | |
GATAGTGAAGACGAAGAAGA+AGG | + | chr4.2:14025567-14025586 | MS.gene023429:CDS | 40.0% | |
GCAAAAACATGAGGTTCTGT+AGG | - | chr4.2:14027759-14027778 | None:intergenic | 40.0% | |
GCAATATGGGATACTCGTTT+GGG | + | chr4.2:14027804-14027823 | MS.gene023429:CDS | 40.0% | |
GCACTTGAGTGACATAGAAT+TGG | - | chr4.2:14024778-14024797 | None:intergenic | 40.0% | |
GCAGTACATACTATCATTCC+AGG | - | chr4.2:14029346-14029365 | None:intergenic | 40.0% | |
GCCATCCAATATGAAAAGCA+TGG | - | chr4.2:14024396-14024415 | None:intergenic | 40.0% | |
GCTCAACAATGAGTACGTTT+GGG | + | chr4.2:14028985-14029004 | MS.gene023429:intron | 40.0% | |
GCTTGGGTAATGACAAAATC+TGG | - | chr4.2:14026304-14026323 | None:intergenic | 40.0% | |
GCTTGTATCCGGTAATCATT+GGG | + | chr4.2:14027404-14027423 | MS.gene023429:intron | 40.0% | |
GGATTCACAATGGGAATAGA+GGG | + | chr4.2:14026189-14026208 | MS.gene023429:intron | 40.0% | |
GTAACCTCATTTGTACCCAA+GGG | - | chr4.2:14026907-14026926 | None:intergenic | 40.0% | |
GTATTCAAAATGCGCTACCA+CGG | - | chr4.2:14028536-14028555 | None:intergenic | 40.0% | |
GTATTTCATTACAGGGACAC+AGG | + | chr4.2:14025034-14025053 | MS.gene023429:CDS | 40.0% | |
TACACCATCCACAGAATTGT+TGG | + | chr4.2:14028665-14028684 | MS.gene023429:intron | 40.0% | |
TCAACTTCAACACAGTCAAG+AGG | - | chr4.2:14025661-14025680 | None:intergenic | 40.0% | |
TCAGACTGCTTAAGGTATGT+TGG | + | chr4.2:14028036-14028055 | MS.gene023429:intron | 40.0% | |
TCCCCATATATGTGCATCTT+GGG | + | chr4.2:14025772-14025791 | MS.gene023429:CDS | 40.0% | |
TGCAATATGGGATACTCGTT+TGG | + | chr4.2:14027803-14027822 | MS.gene023429:CDS | 40.0% | |
TGCCCAAGATGCACATATAT+GGG | - | chr4.2:14025777-14025796 | None:intergenic | 40.0% | |
TGCTCAACAATGAGTACGTT+TGG | + | chr4.2:14028984-14029003 | MS.gene023429:intron | 40.0% | |
TGGAGAGAATTGTAAGCAGA+AGG | - | chr4.2:14024376-14024395 | None:intergenic | 40.0% | |
TGGATGTGATTGGATGCTTA+TGG | - | chr4.2:14028558-14028577 | None:intergenic | 40.0% | |
TTACCGATCAAATGGGGTAA+CGG | + | chr4.2:14025132-14025151 | MS.gene023429:intron | 40.0% | |
TTCTGTTCGAACTAAACCCA+TGG | - | chr4.2:14025000-14025019 | None:intergenic | 40.0% | |
TTGTAACTGAGGACTCGATT+TGG | + | chr4.2:14026435-14026454 | MS.gene023429:intron | 40.0% | |
TTTCCGTTACCCCATTTGAT+CGG | - | chr4.2:14025138-14025157 | None:intergenic | 40.0% | |
! | ACACCTTCAATCAGAAGTGT+CGG | + | chr4.2:14024836-14024855 | MS.gene023429:intron | 40.0% |
! | ATGGGACCTTTCTTTGGAAA+AGG | + | chr4.2:14028853-14028872 | MS.gene023429:CDS | 40.0% |
! | CCAGGTATAATTTTTGCCCT+TGG | + | chr4.2:14026888-14026907 | MS.gene023429:intron | 40.0% |
! | CGATATTTTACGTGACACCA+TGG | + | chr4.2:14024980-14024999 | MS.gene023429:CDS | 40.0% |
! | GTCGGTATTTAGAGTTCAAG+AGG | + | chr4.2:14024854-14024873 | MS.gene023429:intron | 40.0% |
! | TAGGTTGGCTAGTTGTATGT+TGG | + | chr4.2:14027974-14027993 | MS.gene023429:intron | 40.0% |
! | TATATGGGGATTTTGTGCCA+TGG | - | chr4.2:14025762-14025781 | None:intergenic | 40.0% |
!! | ACTGATGACTCTGAAATGGA+TGG | + | chr4.2:14025522-14025541 | MS.gene023429:CDS | 40.0% |
!! | AGGAGCGTTTACTTGTTCTT+GGG | - | chr4.2:14028912-14028931 | None:intergenic | 40.0% |
!! | AGTTGAAGGGTGCCAAATAA+TGG | - | chr4.2:14026009-14026028 | None:intergenic | 40.0% |
!! | ATATTGGATGGCCTTGTCTT+AGG | + | chr4.2:14024404-14024423 | MS.gene023429:CDS | 40.0% |
!! | CTTTGGGTTTTACCCTTTCA+TGG | + | chr4.2:14028737-14028756 | MS.gene023429:intron | 40.0% |
!! | GTTCCGAAAAAGGTATTGCT+TGG | - | chr4.2:14027643-14027662 | None:intergenic | 40.0% |
AAGACCCCAAAGAACTGCAT+TGG | + | chr4.2:14029308-14029327 | MS.gene023429:CDS | 45.0% | |
AGTGAAGACGAAGAAGAAGG+TGG | + | chr4.2:14025570-14025589 | MS.gene023429:CDS | 45.0% | |
ATCAACTCCTTGGACACCTT+CGG | - | chr4.2:14027304-14027323 | None:intergenic | 45.0% | |
CAAGAAGATTTCTCAGCCTG+GGG | - | chr4.2:14025432-14025451 | None:intergenic | 45.0% | |
CACTAGCAGATAGCATCACA+AGG | - | chr4.2:14025267-14025286 | None:intergenic | 45.0% | |
CCAAGAAGATTTCTCAGCCT+GGG | - | chr4.2:14025433-14025452 | None:intergenic | 45.0% | |
CTCCACTCAATGGATGTGAT+TGG | - | chr4.2:14028568-14028587 | None:intergenic | 45.0% | |
CTGCCCAAGATGCACATATA+TGG | - | chr4.2:14025778-14025797 | None:intergenic | 45.0% | |
GCACTTGGGTGACATAGAAT+TGG | + | chr4.2:14024661-14024680 | MS.gene023429:intron | 45.0% | |
GCCCAAGATGCACATATATG+GGG | - | chr4.2:14025776-14025795 | None:intergenic | 45.0% | |
GGCTTGTATCCGGTAATCAT+TGG | + | chr4.2:14027403-14027422 | MS.gene023429:intron | 45.0% | |
GTGTGCCAATGCAGTTCTTT+GGG | - | chr4.2:14029316-14029335 | None:intergenic | 45.0% | |
GTTGTGGCTGAATAGCACAA+AGG | + | chr4.2:14026168-14026187 | MS.gene023429:intron | 45.0% | |
TAATATGTTGCATGTGCCCC+AGG | + | chr4.2:14025413-14025432 | MS.gene023429:intron | 45.0% | |
TACACCGACACAAGTGACTA+CGG | - | chr4.2:14024804-14024823 | None:intergenic | 45.0% | |
TAGTCACTTGGGTAGCACTT+GGG | + | chr4.2:14024647-14024666 | MS.gene023429:intron | 45.0% | |
TATTAACCGGATACGCTCCA+TGG | + | chr4.2:14025742-14025761 | MS.gene023429:CDS | 45.0% | |
TATTATCTCCCGACCTGTTG+TGG | - | chr4.2:14026809-14026828 | None:intergenic | 45.0% | |
TCCAAGAAGATTTCTCAGCC+TGG | - | chr4.2:14025434-14025453 | None:intergenic | 45.0% | |
TCCACACGAAGCTTCTTCAT+TGG | + | chr4.2:14028588-14028607 | MS.gene023429:CDS | 45.0% | |
TCGAGCCACTAATAGCATGT+AGG | - | chr4.2:14026053-14026072 | None:intergenic | 45.0% | |
TCGTCCAACAATTCTGTGGA+TGG | - | chr4.2:14028672-14028691 | None:intergenic | 45.0% | |
TCGTGATCTCAGACTGCTTA+AGG | + | chr4.2:14028028-14028047 | MS.gene023429:CDS | 45.0% | |
TCTGTTCACACCTACAGTTG+CGG | + | chr4.2:14025699-14025718 | MS.gene023429:intron | 45.0% | |
TCTTCCAACTTATCCACACC+AGG | - | chr4.2:14024331-14024350 | None:intergenic | 45.0% | |
TGAATAGGAAGGAGATTCCG+TGG | + | chr4.2:14028516-14028535 | MS.gene023429:intron | 45.0% | |
TGTGCCAATGCAGTTCTTTG+GGG | - | chr4.2:14029315-14029334 | None:intergenic | 45.0% | |
TGTGTGCCAATGCAGTTCTT+TGG | - | chr4.2:14029317-14029336 | None:intergenic | 45.0% | |
TGTTCAATGAACCCTTGCAG+TGG | + | chr4.2:14027730-14027749 | MS.gene023429:intron | 45.0% | |
TTCCATGTTGCAGCAGATGT+AGG | - | chr4.2:14027553-14027572 | None:intergenic | 45.0% | |
TTGGCTAAGGACCAGTCATA+GGG | - | chr4.2:14025832-14025851 | None:intergenic | 45.0% | |
TTTGCCCTTGGGTACAAATG+AGG | + | chr4.2:14026900-14026919 | MS.gene023429:intron | 45.0% | |
TTTGGAAAAGGACGAGGAAG+AGG | + | chr4.2:14028865-14028884 | MS.gene023429:CDS | 45.0% | |
! | CCGCCAAGCAATACCTTTTT+CGG | + | chr4.2:14027637-14027656 | MS.gene023429:intron | 45.0% |
! | CCTCGTCCTTTTCCAAAGAA+AGG | - | chr4.2:14028862-14028881 | None:intergenic | 45.0% |
! | CCTTTCTTTGGAAAAGGACG+AGG | + | chr4.2:14028859-14028878 | MS.gene023429:CDS | 45.0% |
! | TATTTCTGCGGTTCCACAAC+AGG | + | chr4.2:14026793-14026812 | MS.gene023429:intron | 45.0% |
! | TGTTGGTAGGTTCACAAGTC+AGG | - | chr4.2:14026760-14026779 | None:intergenic | 45.0% |
!! | CAGGAGCGTTTACTTGTTCT+TGG | - | chr4.2:14028913-14028932 | None:intergenic | 45.0% |
!! | CCGAAAAAGGTATTGCTTGG+CGG | - | chr4.2:14027640-14027659 | None:intergenic | 45.0% |
!! | TGACTCTGAAATGGATGGTG+AGG | + | chr4.2:14025527-14025546 | MS.gene023429:CDS | 45.0% |
!! | TGCGTCTTTTCAAGCACACA+AGG | + | chr4.2:14027839-14027858 | MS.gene023429:CDS | 45.0% |
!! | TGTTTTTGCTTCTTGCTCCG+TGG | + | chr4.2:14027770-14027789 | MS.gene023429:CDS | 45.0% |
ACACCGACACAAGTGACTAC+GGG | - | chr4.2:14024803-14024822 | None:intergenic | 50.0% | |
ACGGAGTGAATCATCTTCGG+CGG | + | chr4.2:14024270-14024289 | MS.gene023429:CDS | 50.0% | |
ACTGGAGTCCTCTTGTTCCA+GGG | + | chr4.2:14027379-14027398 | MS.gene023429:CDS | 50.0% | |
AGCCTACATCTGCTGCAACA+TGG | + | chr4.2:14027548-14027567 | MS.gene023429:CDS | 50.0% | |
AGCGGCAGCTAAGGTTGTTA+AGG | + | chr4.2:14027116-14027135 | MS.gene023429:intron | 50.0% | |
AGGTTCACAAGTCAGGTCGT+GGG | - | chr4.2:14026753-14026772 | None:intergenic | 50.0% | |
CACAGGTTCCGGTAAAAGTG+TGG | + | chr4.2:14024302-14024321 | MS.gene023429:CDS | 50.0% | |
CATTGGCACACACAGATTCC+TGG | + | chr4.2:14029325-14029344 | MS.gene023429:CDS | 50.0% | |
CCCAGGCTGAGAAATCTTCT+TGG | + | chr4.2:14025430-14025449 | MS.gene023429:intron | 50.0% | |
CCTGAACTGCATCAACTCCT+TGG | - | chr4.2:14027314-14027333 | None:intergenic | 50.0% | |
CTACCCGTAGTCACTTGTGT+CGG | + | chr4.2:14024797-14024816 | MS.gene023429:intron | 50.0% | |
CTAGCAGAGACAGAAACCGA+AGG | + | chr4.2:14027285-14027304 | MS.gene023429:CDS | 50.0% | |
CTTGGCTAAGGACCAGTCAT+AGG | - | chr4.2:14025833-14025852 | None:intergenic | 50.0% | |
GAGTTACCTTCCGCAACTGT+AGG | - | chr4.2:14025712-14025731 | None:intergenic | 50.0% | |
GCAACCTGGTGTGGATAAGT+TGG | + | chr4.2:14024324-14024343 | MS.gene023429:CDS | 50.0% | |
GCCAATGAAGAAGCTTCGTG+TGG | - | chr4.2:14028592-14028611 | None:intergenic | 50.0% | |
GCCGATCACAATGTCACAAG+CGG | + | chr4.2:14024701-14024720 | MS.gene023429:intron | 50.0% | |
GCCGCTTGTGACATTGTGAT+CGG | - | chr4.2:14024705-14024724 | None:intergenic | 50.0% | |
GCGGCAGCTAAGGTTGTTAA+GGG | + | chr4.2:14027117-14027136 | MS.gene023429:intron | 50.0% | |
GCTAGTTGTATGTTGGCGTC+GGG | + | chr4.2:14027981-14028000 | MS.gene023429:CDS | 50.0% | |
GGTCCCATATTCTGTGGCAA+AGG | - | chr4.2:14028841-14028860 | None:intergenic | 50.0% | |
GTAGTCACTTGGGTAGCACT+TGG | + | chr4.2:14024646-14024665 | MS.gene023429:intron | 50.0% | |
TACCTGCAAAGTAGGACCAC+CGG | - | chr4.2:14025598-14025617 | None:intergenic | 50.0% | |
TAGGTTCACAAGTCAGGTCG+TGG | - | chr4.2:14026754-14026773 | None:intergenic | 50.0% | |
TATGGGATACTCGTTTGGGG+AGG | + | chr4.2:14027808-14027827 | MS.gene023429:CDS | 50.0% | |
TCATGCAGCTTCTGATGGCA+AGG | - | chr4.2:14029413-14029432 | None:intergenic | 50.0% | |
TGTGCATCTTGGGCAGAATC+TGG | + | chr4.2:14025782-14025801 | MS.gene023429:CDS | 50.0% | |
TGTGCTTGAAAAGACGCAGC+TGG | - | chr4.2:14027837-14027856 | None:intergenic | 50.0% | |
TTCACACCTACAGTTGCGGA+AGG | + | chr4.2:14025703-14025722 | MS.gene023429:intron | 50.0% | |
TTCGTGTGGACTCCACTCAA+TGG | - | chr4.2:14028578-14028597 | None:intergenic | 50.0% | |
TTGCGGAAGGTAACTCACGA+AGG | + | chr4.2:14025716-14025735 | MS.gene023429:CDS | 50.0% | |
TTTGTGCCATGGAGCGTATC+CGG | - | chr4.2:14025751-14025770 | None:intergenic | 50.0% | |
! | AAAAGTGTGGCAACCTGGTG+TGG | + | chr4.2:14024315-14024334 | MS.gene023429:CDS | 50.0% |
! | AAATCTGGGACATCAGCCCA+TGG | - | chr4.2:14026289-14026308 | None:intergenic | 50.0% |
! | CACACTTTTACCGGAACCTG+TGG | - | chr4.2:14024304-14024323 | None:intergenic | 50.0% |
! | CCAGGTTGCCACACTTTTAC+CGG | - | chr4.2:14024313-14024332 | None:intergenic | 50.0% |
! | CTTGTGTCGGTGTAGTACAC+TGG | + | chr4.2:14024810-14024829 | MS.gene023429:intron | 50.0% |
! | GGCTAGTTGTATGTTGGCGT+CGG | + | chr4.2:14027980-14027999 | MS.gene023429:CDS | 50.0% |
! | TGGTGAGGATAGTGATAGCG+AGG | + | chr4.2:14025542-14025561 | MS.gene023429:CDS | 50.0% |
!! | ACAGAAACCGAAGGTGTCCA+AGG | + | chr4.2:14027294-14027313 | MS.gene023429:CDS | 50.0% |
!! | CCAAGGAGTTGATGCAGTTC+AGG | + | chr4.2:14027311-14027330 | MS.gene023429:CDS | 50.0% |
!! | CTAGCTCTGAACTTTGTCGG+AGG | - | chr4.2:14026832-14026851 | None:intergenic | 50.0% |
!! | GAGGGTGTTACCTGCAAAGT+AGG | - | chr4.2:14025606-14025625 | None:intergenic | 50.0% |
ACAAGCCTCCCTGGAACAAG+AGG | - | chr4.2:14027390-14027409 | None:intergenic | 55.0% | |
AGTTGGGGAGGCAGATCTTC+AGG | - | chr4.2:14028932-14028951 | None:intergenic | 55.0% | |
GACGAAGAAGAAGGTGGTGC+CGG | + | chr4.2:14025576-14025595 | MS.gene023429:CDS | 55.0% | |
GACTGGAGTCCTCTTGTTCC+AGG | + | chr4.2:14027378-14027397 | MS.gene023429:CDS | 55.0% | |
GAGTGAATCATCTTCGGCGG+CGG | + | chr4.2:14024273-14024292 | MS.gene023429:CDS | 55.0% | |
GGAAAAGGACGAGGAAGAGG+AGG | + | chr4.2:14028868-14028887 | MS.gene023429:CDS | 55.0% | |
GGCAGAATCTGGTCATGTGC+AGG | + | chr4.2:14025793-14025812 | MS.gene023429:CDS | 55.0% | |
GTTCCAGGGAGGCTTGTATC+CGG | + | chr4.2:14027393-14027412 | MS.gene023429:CDS | 55.0% | |
TCTGCGGTTCCACAACAGGT+CGG | + | chr4.2:14026797-14026816 | MS.gene023429:intron | 55.0% | |
TCTGTAGGGCTCCACTGCAA+GGG | - | chr4.2:14027744-14027763 | None:intergenic | 55.0% | |
TTACCGGATACAAGCCTCCC+TGG | - | chr4.2:14027399-14027418 | None:intergenic | 55.0% | |
TTCTGTAGGGCTCCACTGCA+AGG | - | chr4.2:14027745-14027764 | None:intergenic | 55.0% | |
! | CCGGTAAAAGTGTGGCAACC+TGG | + | chr4.2:14024310-14024329 | MS.gene023429:CDS | 55.0% |
! | TGGCGTCGGGTAGTGATGAT+GGG | + | chr4.2:14027994-14028013 | MS.gene023429:CDS | 55.0% |
! | TTCTGGGAAGAGACGTGAGC+TGG | + | chr4.2:14025485-14025504 | MS.gene023429:CDS | 55.0% |
! | TTGGCGTCGGGTAGTGATGA+TGG | + | chr4.2:14027993-14028012 | MS.gene023429:CDS | 55.0% |
CTGCGGTTCCACAACAGGTC+GGG | + | chr4.2:14026798-14026817 | MS.gene023429:intron | 60.0% | |
GGAGTCCTCTTGTTCCAGGG+AGG | + | chr4.2:14027382-14027401 | MS.gene023429:CDS | 60.0% | |
TGAATCATCTTCGGCGGCGG+CGG | + | chr4.2:14024276-14024295 | MS.gene023429:CDS | 60.0% | |
TGCCGGTGGTCCTACTTTGC+AGG | + | chr4.2:14025593-14025612 | MS.gene023429:CDS | 60.0% | |
! | GAAGAAGAAGGTGGTGCCGG+TGG | + | chr4.2:14025579-14025598 | MS.gene023429:CDS | 60.0% |
! | GGCGGCGGCGCCACAGGTTC+CGG | + | chr4.2:14024291-14024310 | MS.gene023429:CDS | 80.0% |
! | TTCGGCGGCGGCGGCGCCAC+AGG | + | chr4.2:14024285-14024304 | MS.gene023429:CDS | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 14024112 | 14029432 | 14024112 | ID=MS.gene023429 |
chr4.2 | mRNA | 14024112 | 14029432 | 14024112 | ID=MS.gene023429.t1;Parent=MS.gene023429 |
chr4.2 | exon | 14024112 | 14024159 | 14024112 | ID=MS.gene023429.t1.exon1;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14024112 | 14024159 | 14024112 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14024268 | 14024425 | 14024268 | ID=MS.gene023429.t1.exon2;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14024268 | 14024425 | 14024268 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14024977 | 14025055 | 14024977 | ID=MS.gene023429.t1.exon3;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14024977 | 14025055 | 14024977 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14025435 | 14025614 | 14025435 | ID=MS.gene023429.t1.exon4;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14025435 | 14025614 | 14025435 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14025716 | 14025814 | 14025716 | ID=MS.gene023429.t1.exon5;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14025716 | 14025814 | 14025716 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14027255 | 14027414 | 14027255 | ID=MS.gene023429.t1.exon6;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14027255 | 14027414 | 14027255 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14027518 | 14027624 | 14027518 | ID=MS.gene023429.t1.exon7;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14027518 | 14027624 | 14027518 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14027750 | 14027889 | 14027750 | ID=MS.gene023429.t1.exon8;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14027750 | 14027889 | 14027750 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14027977 | 14028049 | 14027977 | ID=MS.gene023429.t1.exon9;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14027977 | 14028049 | 14027977 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14028523 | 14028638 | 14028523 | ID=MS.gene023429.t1.exon10;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14028523 | 14028638 | 14028523 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14028850 | 14028967 | 14028850 | ID=MS.gene023429.t1.exon11;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14028850 | 14028967 | 14028850 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
chr4.2 | exon | 14029301 | 14029432 | 14029301 | ID=MS.gene023429.t1.exon12;Parent=MS.gene023429.t1 |
chr4.2 | CDS | 14029301 | 14029432 | 14029301 | ID=cds.MS.gene023429.t1;Parent=MS.gene023429.t1 |
Gene Sequence |
Protein sequence |