Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023430.t1 | XP_013446579.1 | 98.7 | 469 | 6 | 0 | 1 | 469 | 1 | 469 | 2.10E-214 | 755 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023430.t1 | Q9BQ67 | 41.0 | 432 | 227 | 8 | 31 | 454 | 29 | 440 | 9.6e-67 | 255.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023430.t1 | A0A072TTT6 | 98.7 | 469 | 6 | 0 | 1 | 469 | 1 | 469 | 1.5e-214 | 755.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene53345 | MS.gene023430 | PPI |
MS.gene023430 | MS.gene052717 | PPI |
MS.gene023430 | MS.gene26959 | PPI |
MS.gene023430 | MS.gene27317 | PPI |
MS.gene023430 | MS.gene07852 | PPI |
MS.gene023430 | MS.gene24284 | PPI |
MS.gene023430 | MS.gene053297 | PPI |
MS.gene023430 | MS.gene011268 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023430.t1 | MTR_8g080700 | 98.934 | 469 | 5 | 0 | 1 | 469 | 1 | 469 | 0.0 | 960 |
MS.gene023430.t1 | MTR_5g024090 | 77.802 | 464 | 90 | 7 | 1 | 460 | 1 | 455 | 0.0 | 689 |
MS.gene023430.t1 | MTR_4g096880 | 29.262 | 393 | 214 | 12 | 52 | 428 | 29 | 373 | 2.95e-34 | 133 |
MS.gene023430.t1 | MTR_2g039250 | 30.218 | 321 | 182 | 10 | 155 | 450 | 151 | 454 | 1.06e-31 | 127 |
MS.gene023430.t1 | MTR_4g073080 | 30.100 | 299 | 174 | 9 | 157 | 450 | 109 | 377 | 9.08e-29 | 117 |
MS.gene023430.t1 | MTR_2g100090 | 27.246 | 334 | 185 | 12 | 155 | 450 | 110 | 423 | 1.82e-25 | 109 |
MS.gene023430.t1 | MTR_2g016160 | 25.974 | 231 | 144 | 8 | 216 | 432 | 99 | 316 | 3.33e-16 | 79.7 |
MS.gene023430.t1 | MTR_1g054300 | 33.766 | 154 | 91 | 6 | 236 | 389 | 339 | 481 | 1.85e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023430.t1 | AT2G19540 | 70.089 | 448 | 130 | 3 | 23 | 467 | 20 | 466 | 0.0 | 640 |
MS.gene023430.t1 | AT5G58230 | 28.894 | 398 | 209 | 11 | 52 | 428 | 29 | 373 | 3.11e-36 | 139 |
MS.gene023430.t1 | AT2G16780 | 29.114 | 316 | 191 | 8 | 146 | 450 | 92 | 385 | 7.21e-34 | 132 |
MS.gene023430.t1 | AT4G35050 | 29.114 | 316 | 191 | 9 | 146 | 450 | 93 | 386 | 3.90e-32 | 127 |
MS.gene023430.t1 | AT2G19520 | 28.440 | 327 | 183 | 10 | 155 | 450 | 157 | 463 | 1.31e-27 | 115 |
MS.gene023430.t1 | AT4G29730 | 27.950 | 322 | 181 | 10 | 155 | 445 | 137 | 438 | 1.22e-26 | 112 |
MS.gene023430.t1 | AT4G29730 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 6.15e-25 | 107 |
MS.gene023430.t1 | AT4G29730 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 6.15e-25 | 107 |
MS.gene023430.t1 | AT1G29260 | 28.108 | 185 | 114 | 6 | 216 | 394 | 98 | 269 | 1.25e-14 | 75.1 |
MS.gene023430.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 141 | 321 | 3.41e-12 | 68.2 |
MS.gene023430.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 3.66e-12 | 68.2 |
MS.gene023430.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 4.15e-12 | 67.8 |
MS.gene023430.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 84 | 264 | 5.13e-12 | 67.4 |
Find 122 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAAGTATCCAATATTTC+TGG | 0.186014 | 4.1:-15354663 | MS.gene023430:CDS |
CAGGAGCGTTTACTTGTTCT+TGG | 0.192683 | 4.1:+15351221 | None:intergenic |
CAGAATATGGGACCTTTCTT+TGG | 0.220480 | 4.1:-15351284 | MS.gene023430:CDS |
ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 4.1:-15355727 | MS.gene023430:intron |
AAATCTTCTTGGAATTCTAT+TGG | 0.257950 | 4.1:-15354690 | MS.gene023430:CDS |
CTGCCCAAGATGCACATATA+TGG | 0.270395 | 4.1:+15354356 | None:intergenic |
TGGATAAAAGCATTGCAATA+TGG | 0.287928 | 4.1:-15352341 | MS.gene023430:CDS |
CACACAGTGTATTTCATTAC+AGG | 0.300493 | 4.1:-15355105 | MS.gene023430:CDS |
TGTGTGCCAATGCAGTTCTT+TGG | 0.305295 | 4.1:+15350817 | None:intergenic |
TGCAATATGGGATACTCGTT+TGG | 0.310651 | 4.1:-15352328 | MS.gene023430:CDS |
GTGTGCCAATGCAGTTCTTT+GGG | 0.311930 | 4.1:+15350818 | None:intergenic |
AATCTTCTTGGAATTCTATT+GGG | 0.321921 | 4.1:-15354689 | MS.gene023430:CDS |
GGCGGCGGCGCCACAGGTTC+CGG | 0.327760 | 4.1:-15355840 | MS.gene023430:CDS |
CTGTCAGTATGTCCAGTAAA+AGG | 0.330541 | 4.1:+15352545 | None:intergenic |
GACATGAGCTCTCATCTTAA+TGG | 0.333584 | 4.1:-15352870 | MS.gene023430:CDS |
AGTTGGGGAGGCAGATCTTC+AGG | 0.338811 | 4.1:+15351202 | None:intergenic |
GACTGGAGTCCTCTTGTTCC+AGG | 0.347996 | 4.1:-15352753 | MS.gene023430:CDS |
GCAATATGGGATACTCGTTT+GGG | 0.354043 | 4.1:-15352327 | MS.gene023430:CDS |
TGCCGGTGGTCCTACTTTGC+AGG | 0.355683 | 4.1:-15354538 | MS.gene023430:intron |
ACGTCTCTTCCCAGAAATAT+TGG | 0.357236 | 4.1:+15354653 | None:intergenic |
TTCGGCGGCGGCGGCGCCAC+AGG | 0.362085 | 4.1:-15355846 | MS.gene023430:CDS |
CCAAGGAGTTGATGCAGTTC+AGG | 0.373931 | 4.1:-15352820 | MS.gene023430:CDS |
CATTGGCACACACAGATTCC+TGG | 0.384701 | 4.1:-15350806 | MS.gene023430:CDS |
CCCAGGCTGAGAAATCTTCT+TGG | 0.387294 | 4.1:-15354701 | MS.gene023430:intron |
CTCACGAAGGTTGTATTAAC+CGG | 0.388862 | 4.1:-15354402 | MS.gene023430:CDS |
TGAAACTGATGACTCTGAAA+TGG | 0.392830 | 4.1:-15354613 | MS.gene023430:CDS |
ATCAACTCCTTGGACACCTT+CGG | 0.400128 | 4.1:+15352830 | None:intergenic |
CCTGGTGAATAAACAATAGT+TGG | 0.407860 | 4.1:+15351185 | None:intergenic |
TCGTGATCTCAGACTGCTTA+AGG | 0.409527 | 4.1:-15352103 | MS.gene023430:intron |
GAGTCATCAGTTTCACGTTT+AGG | 0.409980 | 4.1:+15354621 | None:intergenic |
GGATAAAAGCATTGCAATAT+GGG | 0.421297 | 4.1:-15352340 | MS.gene023430:CDS |
ATGGGACCTTTCTTTGGAAA+AGG | 0.423598 | 4.1:-15351278 | MS.gene023430:CDS |
TGCCCAAGATGCACATATAT+GGG | 0.425064 | 4.1:+15354357 | None:intergenic |
CTGGTGAATAAACAATAGTT+GGG | 0.426771 | 4.1:+15351186 | None:intergenic |
TGTGCATCTTGGGCAGAATC+TGG | 0.430129 | 4.1:-15354349 | MS.gene023430:CDS |
GGCTAGTTGTATGTTGGCGT+CGG | 0.431422 | 4.1:-15352151 | MS.gene023430:CDS |
TCCCCATATATGTGCATCTT+GGG | 0.431645 | 4.1:-15354359 | MS.gene023430:CDS |
AGGAGCGTTTACTTGTTCTT+GGG | 0.432127 | 4.1:+15351222 | None:intergenic |
TTTGTGCCATGGAGCGTATC+CGG | 0.432906 | 4.1:+15354383 | None:intergenic |
TGAATCATCTTCGGCGGCGG+CGG | 0.433527 | 4.1:-15355855 | MS.gene023430:CDS |
GCAGTACATACTATCATTCC+AGG | 0.440018 | 4.1:+15350788 | None:intergenic |
TTAAAGTATCCAATATTTCT+GGG | 0.447355 | 4.1:-15354662 | MS.gene023430:CDS |
TCCACACGAAGCTTCTTCAT+TGG | 0.452856 | 4.1:-15351543 | MS.gene023430:CDS |
ATCCCCATATATGTGCATCT+TGG | 0.460743 | 4.1:-15354360 | MS.gene023430:CDS |
CCTGAACTGCATCAACTCCT+TGG | 0.464940 | 4.1:+15352820 | None:intergenic |
CCAACTATTGTTTATTCACC+AGG | 0.472482 | 4.1:-15351185 | MS.gene023430:intron |
TGGATGTGATTGGATGCTTA+TGG | 0.478480 | 4.1:+15351576 | None:intergenic |
TTTGGAAAAGGACGAGGAAG+AGG | 0.483191 | 4.1:-15351266 | MS.gene023430:CDS |
GCTAGTTGTATGTTGGCGTC+GGG | 0.490510 | 4.1:-15352150 | MS.gene023430:CDS |
AAGGTGCTTTGAATATTTGA+AGG | 0.491981 | 4.1:+15350740 | None:intergenic |
TTGGCGTCGGGTAGTGATGA+TGG | 0.493276 | 4.1:-15352138 | MS.gene023430:CDS |
ATGAAGGCTATGCTATAGAC+TGG | 0.496426 | 4.1:-15352770 | MS.gene023430:CDS |
CCGGTAAAAGTGTGGCAACC+TGG | 0.501960 | 4.1:-15355821 | MS.gene023430:CDS |
TGAATGTATTGTCATGGAAC+AGG | 0.507712 | 4.1:-15352263 | MS.gene023430:intron |
AATCCTTTGCCACAGAATAT+GGG | 0.508159 | 4.1:-15351296 | MS.gene023430:intron |
CTCCACTCAATGGATGTGAT+TGG | 0.514101 | 4.1:+15351566 | None:intergenic |
GTTCCAGGGAGGCTTGTATC+CGG | 0.514187 | 4.1:-15352738 | MS.gene023430:intron |
GGCAGAATCTGGTCATGTGC+AGG | 0.520350 | 4.1:-15354338 | MS.gene023430:intron |
CCTTTCTTTGGAAAAGGACG+AGG | 0.522730 | 4.1:-15351272 | MS.gene023430:CDS |
TTCTGGGAAGAGACGTGAGC+TGG | 0.529788 | 4.1:-15354646 | MS.gene023430:CDS |
GAAACGGAGTGAATCATCTT+CGG | 0.530490 | 4.1:-15355864 | MS.gene023430:CDS |
GACGAAGAAGAAGGTGGTGC+CGG | 0.530693 | 4.1:-15354555 | MS.gene023430:CDS |
CGGCATAAAACATCGTCAAA+AGG | 0.531323 | 4.1:-15356011 | MS.gene023430:CDS |
GATAGTGAAGACGAAGAAGA+AGG | 0.533242 | 4.1:-15354564 | MS.gene023430:CDS |
GAGGGTGTTACCTGCAAAGT+AGG | 0.537218 | 4.1:+15354528 | None:intergenic |
GCAACCTGGTGTGGATAAGT+TGG | 0.537432 | 4.1:-15355807 | MS.gene023430:CDS |
ACAGAAACCGAAGGTGTCCA+AGG | 0.538288 | 4.1:-15352837 | MS.gene023430:CDS |
CAATAATAGTATTTATCTGT+GGG | 0.539902 | 4.1:-15352606 | MS.gene023430:CDS |
TTACCGGATACAAGCCTCCC+TGG | 0.543277 | 4.1:+15352735 | None:intergenic |
AAATTTAAGCACAAAGATGA+AGG | 0.546613 | 4.1:-15352786 | MS.gene023430:CDS |
TTCGTGTGGACTCCACTCAA+TGG | 0.553277 | 4.1:+15351556 | None:intergenic |
GAGTGAATCATCTTCGGCGG+CGG | 0.557113 | 4.1:-15355858 | MS.gene023430:CDS |
GCAATAATAGTATTTATCTG+TGG | 0.558281 | 4.1:-15352607 | MS.gene023430:CDS |
ATAGTATGTACTGCAGCAGA+TGG | 0.561830 | 4.1:-15350779 | MS.gene023430:CDS |
TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 4.1:+15352581 | None:intergenic |
TGGAGAGAATTGTAAGCAGA+AGG | 0.568749 | 4.1:+15355758 | None:intergenic |
ACAAGCCTCCCTGGAACAAG+AGG | 0.572225 | 4.1:+15352744 | None:intergenic |
TGTGCTTGAAAAGACGCAGC+TGG | 0.573745 | 4.1:+15352297 | None:intergenic |
AAGACCCCAAAGAACTGCAT+TGG | 0.573867 | 4.1:-15350823 | MS.gene023430:CDS |
TAGGTTGGCTAGTTGTATGT+TGG | 0.574859 | 4.1:-15352157 | MS.gene023430:CDS |
GCCATCCAATATGAAAAGCA+TGG | 0.576629 | 4.1:+15355738 | None:intergenic |
TTTGAATATTTGAAGGCATG+AGG | 0.577378 | 4.1:+15350747 | None:intergenic |
TCTTCCAACTTATCCACACC+AGG | 0.583170 | 4.1:+15355803 | None:intergenic |
TGTGCCAATGCAGTTCTTTG+GGG | 0.585321 | 4.1:+15350819 | None:intergenic |
AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 4.1:-15352583 | MS.gene023430:CDS |
TTCTGTTCGAACTAAACCCA+TGG | 0.588801 | 4.1:+15355134 | None:intergenic |
AAAAGTGTGGCAACCTGGTG+TGG | 0.591077 | 4.1:-15355816 | MS.gene023430:CDS |
GTATTTCATTACAGGGACAC+AGG | 0.601861 | 4.1:-15355097 | MS.gene023430:intron |
CTGATGTGAATGTATTGTCA+TGG | 0.604527 | 4.1:-15352269 | MS.gene023430:CDS |
TACCTGCAAAGTAGGACCAC+CGG | 0.605560 | 4.1:+15354536 | None:intergenic |
TTACGTAAGTTGATTATCAG+CGG | 0.605575 | 4.1:+15351511 | None:intergenic |
TGGCGTCGGGTAGTGATGAT+GGG | 0.605656 | 4.1:-15352137 | MS.gene023430:CDS |
TATTAACCGGATACGCTCCA+TGG | 0.608736 | 4.1:-15354389 | MS.gene023430:CDS |
ACACAGTGTATTTCATTACA+GGG | 0.609707 | 4.1:-15355104 | MS.gene023430:CDS |
GGAAAAGGACGAGGAAGAGG+AGG | 0.612345 | 4.1:-15351263 | MS.gene023430:CDS |
GAAGAAGAAGGTGGTGCCGG+TGG | 0.612395 | 4.1:-15354552 | MS.gene023430:CDS |
ACTGATGACTCTGAAATGGA+TGG | 0.615606 | 4.1:-15354609 | MS.gene023430:CDS |
CACAGGTTCCGGTAAAAGTG+TGG | 0.622299 | 4.1:-15355829 | MS.gene023430:CDS |
ACTGGAGTCCTCTTGTTCCA+GGG | 0.624385 | 4.1:-15352752 | MS.gene023430:CDS |
GTATTCAAAATGCGCTACCA+CGG | 0.630470 | 4.1:+15351598 | None:intergenic |
TGAATAAACAATAGTTGGGG+AGG | 0.631441 | 4.1:+15351190 | None:intergenic |
AAAGGCAAAGAGCAAGAACA+AGG | 0.634436 | 4.1:-15355993 | MS.gene023430:intron |
ATCCAATCACATCCATTGAG+TGG | 0.634447 | 4.1:-15351568 | MS.gene023430:CDS |
GGAGTCCTCTTGTTCCAGGG+AGG | 0.636093 | 4.1:-15352749 | MS.gene023430:CDS |
TCATGCAGCTTCTGATGGCA+AGG | 0.636729 | 4.1:+15350721 | None:intergenic |
TGACTCTGAAATGGATGGTG+AGG | 0.638725 | 4.1:-15354604 | MS.gene023430:CDS |
GCCAATGAAGAAGCTTCGTG+TGG | 0.638913 | 4.1:+15351542 | None:intergenic |
TGAATAGGAAGGAGATTCCG+TGG | 0.641695 | 4.1:-15351615 | MS.gene023430:intron |
GTGTATCATGCAGCTTCTGA+TGG | 0.643240 | 4.1:+15350716 | None:intergenic |
TGGTGAGGATAGTGATAGCG+AGG | 0.651927 | 4.1:-15354589 | MS.gene023430:CDS |
GTAATGAAATACACTGTGTG+TGG | 0.652047 | 4.1:+15355108 | None:intergenic |
GCCCAAGATGCACATATATG+GGG | 0.653392 | 4.1:+15354358 | None:intergenic |
TTCACACCTACAGTTGCGGA+AGG | 0.659965 | 4.1:-15354428 | MS.gene023430:intron |
AACTAATTGAAGATGACTCG+CGG | 0.660356 | 4.1:-15356031 | None:intergenic |
TTTGTTCTTTACCTAAGACA+AGG | 0.662595 | 4.1:+15355716 | None:intergenic |
TGGTGAATAAACAATAGTTG+GGG | 0.666731 | 4.1:+15351187 | None:intergenic |
AGTGAAGACGAAGAAGAAGG+TGG | 0.675905 | 4.1:-15354561 | MS.gene023430:CDS |
ACGGAGTGAATCATCTTCGG+CGG | 0.677615 | 4.1:-15355861 | MS.gene023430:CDS |
CAATATGGGATACTCGTTTG+GGG | 0.693736 | 4.1:-15352326 | MS.gene023430:CDS |
TATGGGATACTCGTTTGGGG+AGG | 0.701784 | 4.1:-15352323 | MS.gene023430:CDS |
CTAGCAGAGACAGAAACCGA+AGG | 0.726742 | 4.1:-15352846 | MS.gene023430:CDS |
TTGCGGAAGGTAACTCACGA+AGG | 0.747550 | 4.1:-15354415 | MS.gene023430:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTAAATATATCTAATCA+AGG | + | chr4.1:15355859-15355878 | None:intergenic | 10.0% |
!! | AATAACAAAAACAAAATAGT+CGG | + | chr4.1:15355077-15355096 | None:intergenic | 15.0% |
!! | AATATTATCTATACTAATGT+TGG | + | chr4.1:15353386-15353405 | None:intergenic | 15.0% |
!! | ATTTCAAAGATTAACTTATA+AGG | + | chr4.1:15353286-15353305 | None:intergenic | 15.0% |
!!! | AAGTTCATTATTTTTTGAAT+AGG | - | chr4.1:15355110-15355129 | MS.gene023430:CDS | 15.0% |
!!! | ATAAGTTAATCTTTGAAATA+TGG | - | chr4.1:15353287-15353306 | MS.gene023430:intron | 15.0% |
!!! | CAACATATTGAAATTTTTTA+AGG | - | chr4.1:15353690-15353709 | MS.gene023430:intron | 15.0% |
!!! | TCATGATTTATTTTTTGTTT+GGG | - | chr4.1:15351552-15351571 | MS.gene023430:CDS | 15.0% |
!!! | TTTTGAAAAAATTGAAGAAA+CGG | - | chr4.1:15350860-15350879 | MS.gene023430:intron | 15.0% |
!! | AAGTAAAAATTCATATGAAG+AGG | + | chr4.1:15352234-15352253 | None:intergenic | 20.0% |
!! | AATCCAAAGTAAGAAAAATA+AGG | + | chr4.1:15355410-15355429 | None:intergenic | 20.0% |
!! | AGTAAAAATTCATATGAAGA+GGG | + | chr4.1:15352233-15352252 | None:intergenic | 20.0% |
!! | ATAAATCCCTGAAATTTATT+AGG | + | chr4.1:15355307-15355326 | None:intergenic | 20.0% |
!! | CAATAATAGTATTTATCTGT+GGG | - | chr4.1:15354134-15354153 | MS.gene023430:intron | 20.0% |
!! | TAATGATGTAATATGCTATT+AGG | + | chr4.1:15354863-15354882 | None:intergenic | 20.0% |
!! | TATAGTACTAAACAAACTAT+GGG | + | chr4.1:15353313-15353332 | None:intergenic | 20.0% |
!! | TGTGAAACATATGTATAAAA+TGG | - | chr4.1:15353250-15353269 | MS.gene023430:intron | 20.0% |
!! | TTATAGTACTAAACAAACTA+TGG | + | chr4.1:15353314-15353333 | None:intergenic | 20.0% |
!! | TTGAACAAAAATATACAACT+CGG | + | chr4.1:15353817-15353836 | None:intergenic | 20.0% |
!!! | AGAAAGTTTACAATTTTGTA+TGG | + | chr4.1:15354701-15354720 | None:intergenic | 20.0% |
!!! | CATGATTTATTTTTTGTTTG+GGG | - | chr4.1:15351553-15351572 | MS.gene023430:CDS | 20.0% |
!!! | GAGTTAATTTTTTTAATCGA+CGG | - | chr4.1:15352493-15352512 | MS.gene023430:intron | 20.0% |
!!! | GTCATGATTTATTTTTTGTT+TGG | - | chr4.1:15351551-15351570 | MS.gene023430:CDS | 20.0% |
!!! | TAGAATTTTTTGTCCTTTAA+TGG | - | chr4.1:15351800-15351819 | MS.gene023430:intron | 20.0% |
!!! | TAGTATAGATAATATTTCTG+CGG | - | chr4.1:15353390-15353409 | MS.gene023430:intron | 20.0% |
!!! | TCATTATTTTTTGAATAGGA+AGG | - | chr4.1:15355114-15355133 | MS.gene023430:CDS | 20.0% |
!!! | TTAAAGTATCCAATATTTCT+GGG | - | chr4.1:15352078-15352097 | MS.gene023430:intron | 20.0% |
!!! | TTAAGGTTCTTAAATTTTAG+CGG | - | chr4.1:15353707-15353726 | MS.gene023430:intron | 20.0% |
!!! | TTTAAAGTATCCAATATTTC+TGG | - | chr4.1:15352077-15352096 | MS.gene023430:intron | 20.0% |
!!! | TTTGTATGGTTTTTCTATAT+GGG | + | chr4.1:15354687-15354706 | None:intergenic | 20.0% |
!!! | TTTTGTATGGTTTTTCTATA+TGG | + | chr4.1:15354688-15354707 | None:intergenic | 20.0% |
! | AAAACTCAAAAGTCCATTAA+AGG | + | chr4.1:15351816-15351835 | None:intergenic | 25.0% |
! | AAATCTTCTTGGAATTCTAT+TGG | - | chr4.1:15352050-15352069 | MS.gene023430:intron | 25.0% |
! | AAATTTAAGCACAAAGATGA+AGG | - | chr4.1:15353954-15353973 | MS.gene023430:intron | 25.0% |
! | AAGAATTATGACATTGTGAT+TGG | - | chr4.1:15351352-15351371 | MS.gene023430:intron | 25.0% |
! | AATCATTCAACTGTTAATGT+GGG | + | chr4.1:15352985-15353004 | None:intergenic | 25.0% |
! | AATCTTCTTGGAATTCTATT+GGG | - | chr4.1:15352051-15352070 | MS.gene023430:intron | 25.0% |
! | AATGAAATACAACAGATATG+AGG | + | chr4.1:15354555-15354574 | None:intergenic | 25.0% |
! | ACGAATTCCTAATAAATTTC+AGG | - | chr4.1:15355297-15355316 | MS.gene023430:intron | 25.0% |
! | ATAATTCAATGTAGTCACTT+GGG | - | chr4.1:15351245-15351264 | MS.gene023430:CDS | 25.0% |
! | CATATTTCATACTATGTTAG+TGG | - | chr4.1:15352579-15352598 | MS.gene023430:CDS | 25.0% |
! | CGAATTCCTAATAAATTTCA+GGG | - | chr4.1:15355298-15355317 | MS.gene023430:intron | 25.0% |
! | CGTAATAAATTTGTAGATCT+GGG | - | chr4.1:15353848-15353867 | MS.gene023430:intron | 25.0% |
! | GCAATAATAGTATTTATCTG+TGG | - | chr4.1:15354133-15354152 | MS.gene023430:intron | 25.0% |
! | GTTTCTCTCATATTATCTTT+GGG | - | chr4.1:15355330-15355349 | MS.gene023430:intron | 25.0% |
! | TAAATTTAGCTACATGATTG+TGG | - | chr4.1:15353171-15353190 | MS.gene023430:intron | 25.0% |
! | TAACAGCAAAATTACTGTAT+AGG | - | chr4.1:15354728-15354747 | MS.gene023430:intron | 25.0% |
! | TAATATGCTATTAGGACATA+AGG | + | chr4.1:15354855-15354874 | None:intergenic | 25.0% |
! | TAGAATGTATAAGATTGAAG+TGG | - | chr4.1:15353142-15353161 | MS.gene023430:intron | 25.0% |
! | TCAAAATGACAAAATATGTG+TGG | + | chr4.1:15353098-15353117 | None:intergenic | 25.0% |
! | TCAACTTACGTAAGTAAATA+CGG | - | chr4.1:15355239-15355258 | MS.gene023430:intron | 25.0% |
! | TCATTGTCAAAGTAGATATA+AGG | - | chr4.1:15354078-15354097 | MS.gene023430:intron | 25.0% |
! | TGTTTCTCTCATATTATCTT+TGG | - | chr4.1:15355329-15355348 | MS.gene023430:intron | 25.0% |
! | TTATCTATACTAATGTTGGT+AGG | + | chr4.1:15353382-15353401 | None:intergenic | 25.0% |
!! | AGCTTTTGTATAATGAAAGA+AGG | + | chr4.1:15355798-15355817 | None:intergenic | 25.0% |
!! | ATTGAAAAAACTCCTTTTAC+TGG | - | chr4.1:15354183-15354202 | MS.gene023430:intron | 25.0% |
!! | TCTTGTGTGTTTTCTTTTAT+AGG | - | chr4.1:15351681-15351700 | MS.gene023430:intron | 25.0% |
!! | TTAAACTATGAGCAACTTTT+TGG | + | chr4.1:15352546-15352565 | None:intergenic | 25.0% |
!! | TTCAAGTTAAAGGAAATAAG+AGG | + | chr4.1:15355886-15355905 | None:intergenic | 25.0% |
!! | TTGTGCTTAAATTTTTGTAG+TGG | + | chr4.1:15353948-15353967 | None:intergenic | 25.0% |
!!! | AATAAAACCCATTATTTTGC+TGG | - | chr4.1:15351079-15351098 | MS.gene023430:intron | 25.0% |
!!! | ATTCTGCTTTTTATTTTCTG+TGG | - | chr4.1:15350816-15350835 | MS.gene023430:CDS | 25.0% |
!!! | ATTTCCTTTAACTTGAAACA+GGG | - | chr4.1:15355889-15355908 | MS.gene023430:intron | 25.0% |
!!! | GGACTTTATTGTTTTTGTTA+TGG | - | chr4.1:15353196-15353215 | MS.gene023430:intron | 25.0% |
!!! | TATTTCCTTTAACTTGAAAC+AGG | - | chr4.1:15355888-15355907 | MS.gene023430:intron | 25.0% |
!!! | TTCTGCTTTTTATTTTCTGT+GGG | - | chr4.1:15350817-15350836 | MS.gene023430:CDS | 25.0% |
!!! | TTGAACCAAGTTATTTCTAT+TGG | - | chr4.1:15352728-15352747 | MS.gene023430:intron | 25.0% |
!!! | TTTTTCTTGTTTCAATGTTG+TGG | - | chr4.1:15352761-15352780 | MS.gene023430:CDS | 25.0% |
AAAATAAGCCCAATGATTAC+CGG | + | chr4.1:15354024-15354043 | None:intergenic | 30.0% | |
AAAGCTAGTAAAACATGACT+AGG | + | chr4.1:15351963-15351982 | None:intergenic | 30.0% | |
AACAAAAACAAAATAGTCGG+CGG | + | chr4.1:15355074-15355093 | None:intergenic | 30.0% | |
AACCTAGCTTATACTCAAAT+AGG | + | chr4.1:15355726-15355745 | None:intergenic | 30.0% | |
AATAAAGTGCGAGATCAAAA+GGG | + | chr4.1:15350799-15350818 | None:intergenic | 30.0% | |
ACACAGTGTATTTCATTACA+GGG | - | chr4.1:15351636-15351655 | MS.gene023430:intron | 30.0% | |
ACTTCTTTGATAGAAAGAGA+TGG | + | chr4.1:15353774-15353793 | None:intergenic | 30.0% | |
AGGATAAATTATTCTGTTCC+AGG | - | chr4.1:15353479-15353498 | MS.gene023430:intron | 30.0% | |
ATCATTCAACTGTTAATGTG+GGG | + | chr4.1:15352984-15353003 | None:intergenic | 30.0% | |
ATGTTGATCTTCATGTTTGT+AGG | - | chr4.1:15354105-15354124 | MS.gene023430:intron | 30.0% | |
ATGTTGCAATTGCAATACTT+AGG | + | chr4.1:15353544-15353563 | None:intergenic | 30.0% | |
CAATCATTCAACTGTTAATG+TGG | + | chr4.1:15352986-15353005 | None:intergenic | 30.0% | |
CATAATTCAATGTAGTCACT+TGG | - | chr4.1:15351244-15351263 | MS.gene023430:CDS | 30.0% | |
CTGATCCAATAGAAATAACT+TGG | + | chr4.1:15352736-15352755 | None:intergenic | 30.0% | |
CTGGTGAATAAACAATAGTT+GGG | + | chr4.1:15355557-15355576 | None:intergenic | 30.0% | |
CTTAGTAGAACATTGTCAAA+GGG | + | chr4.1:15352938-15352957 | None:intergenic | 30.0% | |
GATAACTCCAGCAAAATAAT+GGG | + | chr4.1:15351089-15351108 | None:intergenic | 30.0% | |
GATGCTTTAATTGTCTTATC+TGG | - | chr4.1:15354806-15354825 | MS.gene023430:intron | 30.0% | |
GCGTAATAAATTTGTAGATC+TGG | - | chr4.1:15353847-15353866 | MS.gene023430:intron | 30.0% | |
GCTTTAACCAAACATTTACT+TGG | + | chr4.1:15352460-15352479 | None:intergenic | 30.0% | |
GTAAGAAAAATAAGGCAGTT+TGG | + | chr4.1:15355402-15355421 | None:intergenic | 30.0% | |
GTAGTAAATGAGCCATTATT+TGG | - | chr4.1:15352603-15352622 | MS.gene023430:CDS | 30.0% | |
TAGAATGAAAATTGAGTCGA+TGG | + | chr4.1:15354527-15354546 | None:intergenic | 30.0% | |
TCCTTCAAAAATGCATTTCT+GGG | + | chr4.1:15354972-15354991 | None:intergenic | 30.0% | |
TCTTAGTAGAACATTGTCAA+AGG | + | chr4.1:15352939-15352958 | None:intergenic | 30.0% | |
TGATAACTCCAGCAAAATAA+TGG | + | chr4.1:15351090-15351109 | None:intergenic | 30.0% | |
TGGTGAATAAACAATAGTTG+GGG | + | chr4.1:15355556-15355575 | None:intergenic | 30.0% | |
TGTATTTCATTGTACTGAGT+AGG | - | chr4.1:15354564-15354583 | MS.gene023430:CDS | 30.0% | |
TGTCATAATTCTTGTGAAAG+AGG | + | chr4.1:15351345-15351364 | None:intergenic | 30.0% | |
TGTTGATCTTCATGTTTGTA+GGG | - | chr4.1:15354106-15354125 | MS.gene023430:intron | 30.0% | |
TTCCTTCAAAAATGCATTTC+TGG | + | chr4.1:15354973-15354992 | None:intergenic | 30.0% | |
TTTCACAATTAATGTCTGCA+TGG | + | chr4.1:15353237-15353256 | None:intergenic | 30.0% | |
TTTGTTCTTTACCTAAGACA+AGG | + | chr4.1:15351027-15351046 | None:intergenic | 30.0% | |
! | AAGGTGCTTTGAATATTTGA+AGG | + | chr4.1:15356003-15356022 | None:intergenic | 30.0% |
! | AGGAACTTTTTATCGGAAAA+TGG | + | chr4.1:15354835-15354854 | None:intergenic | 30.0% |
! | AGTTGATCTTACTGACATTT+TGG | - | chr4.1:15352284-15352303 | MS.gene023430:CDS | 30.0% |
! | GGACATAAGGAACTTTTTAT+CGG | + | chr4.1:15354842-15354861 | None:intergenic | 30.0% |
! | TATTGCAATGCTTTTATCCA+CGG | + | chr4.1:15354399-15354418 | None:intergenic | 30.0% |
! | TGACATAGAATTGGTAACAT+TGG | + | chr4.1:15351378-15351397 | None:intergenic | 30.0% |
! | TTTGAATATTTGAAGGCATG+AGG | + | chr4.1:15355996-15356015 | None:intergenic | 30.0% |
!! | AGTATCTCGTTTGATTTGAT+AGG | - | chr4.1:15353459-15353478 | MS.gene023430:intron | 30.0% |
!! | AGTTATTTCTATTGGATCAG+AGG | - | chr4.1:15352736-15352755 | MS.gene023430:intron | 30.0% |
!! | GGATAAAAGCATTGCAATAT+GGG | - | chr4.1:15354400-15354419 | MS.gene023430:CDS | 30.0% |
!! | GTAACGGAAAAGTTGATATT+GGG | - | chr4.1:15351757-15351776 | MS.gene023430:intron | 30.0% |
!! | GTTATTTCTATTGGATCAGA+GGG | - | chr4.1:15352737-15352756 | MS.gene023430:intron | 30.0% |
!! | TGGATAAAAGCATTGCAATA+TGG | - | chr4.1:15354399-15354418 | MS.gene023430:CDS | 30.0% |
!! | TTACGTAAGTTGATTATCAG+CGG | + | chr4.1:15355232-15355251 | None:intergenic | 30.0% |
!!! | AGTTTTAAAAACCCTATGAC+TGG | - | chr4.1:15352427-15352446 | MS.gene023430:intron | 30.0% |
!!! | CTGCCTTATTTTTCTTACTT+TGG | - | chr4.1:15355404-15355423 | MS.gene023430:intron | 30.0% |
!!! | GAATGTTGTTATTTTGCCAT+GGG | - | chr4.1:15352879-15352898 | MS.gene023430:CDS | 30.0% |
!!! | TGAATGTTGTTATTTTGCCA+TGG | - | chr4.1:15352878-15352897 | MS.gene023430:CDS | 30.0% |
AAAGTGAGTATTTGAGAGCT+TGG | - | chr4.1:15353019-15353038 | MS.gene023430:intron | 35.0% | |
AAGCAAACGCACAAAAATTG+TGG | + | chr4.1:15351499-15351518 | None:intergenic | 35.0% | |
AATCCTTTGCCACAGAATAT+GGG | - | chr4.1:15355444-15355463 | MS.gene023430:intron | 35.0% | |
ACACTGAAATGTTCCGAAAA+AGG | + | chr4.1:15354262-15354281 | None:intergenic | 35.0% | |
ACCAAACATTTACTTGGCTA+AGG | + | chr4.1:15352454-15352473 | None:intergenic | 35.0% | |
ACTGTTCATTACCGATCAAA+TGG | - | chr4.1:15351733-15351752 | MS.gene023430:intron | 35.0% | |
AGCCTATTTGAGTATAAGCT+AGG | - | chr4.1:15355721-15355740 | MS.gene023430:intron | 35.0% | |
ATAGCACAAAGGATTCACAA+TGG | - | chr4.1:15352788-15352807 | MS.gene023430:CDS | 35.0% | |
CAAAAACATGAGGTTCTGTA+GGG | + | chr4.1:15354367-15354386 | None:intergenic | 35.0% | |
CACACAGTGTATTTCATTAC+AGG | - | chr4.1:15351635-15351654 | MS.gene023430:intron | 35.0% | |
CATGCAACATATTATCAACG+AGG | + | chr4.1:15352016-15352035 | None:intergenic | 35.0% | |
CCAACTATTGTTTATTCACC+AGG | - | chr4.1:15355555-15355574 | MS.gene023430:intron | 35.0% | |
CCTGGTGAATAAACAATAGT+TGG | + | chr4.1:15355558-15355577 | None:intergenic | 35.0% | |
CTAATCAAGGAGTTCTATCA+TGG | + | chr4.1:15355846-15355865 | None:intergenic | 35.0% | |
CTGATGTGAATGTATTGTCA+TGG | - | chr4.1:15354471-15354490 | MS.gene023430:intron | 35.0% | |
CTGGAGTTATCACTGTTAAA+TGG | - | chr4.1:15351098-15351117 | MS.gene023430:intron | 35.0% | |
CTGTTCATTACCGATCAAAT+GGG | - | chr4.1:15351734-15351753 | MS.gene023430:intron | 35.0% | |
CTTGGGTAATGACAAAATCT+GGG | + | chr4.1:15352912-15352931 | None:intergenic | 35.0% | |
GAATAAAGTGCGAGATCAAA+AGG | + | chr4.1:15350800-15350819 | None:intergenic | 35.0% | |
GATACGACAGAAAAGTTGAA+GGG | + | chr4.1:15352631-15352650 | None:intergenic | 35.0% | |
GCAAAGTGATTCAAATTACC+TGG | + | chr4.1:15355576-15355595 | None:intergenic | 35.0% | |
GTAATGAAATACACTGTGTG+TGG | + | chr4.1:15351635-15351654 | None:intergenic | 35.0% | |
GTTGATCTTCATGTTTGTAG+GGG | - | chr4.1:15354107-15354126 | MS.gene023430:intron | 35.0% | |
TAATCCTTTGCCACAGAATA+TGG | - | chr4.1:15355443-15355462 | MS.gene023430:intron | 35.0% | |
TAGCACAAAGGATTCACAAT+GGG | - | chr4.1:15352789-15352808 | MS.gene023430:CDS | 35.0% | |
TATTTGCAGAGTCCATGAAA+GGG | + | chr4.1:15355361-15355380 | None:intergenic | 35.0% | |
TCATAGCTCTTGAATTGCAA+TGG | + | chr4.1:15351166-15351185 | None:intergenic | 35.0% | |
TCATTCAACTGTTAATGTGG+GGG | + | chr4.1:15352983-15353002 | None:intergenic | 35.0% | |
TCCTTAGCCAAGTAAATGTT+TGG | - | chr4.1:15352450-15352469 | MS.gene023430:intron | 35.0% | |
TCTTTCCTACATGCTATTAG+TGG | - | chr4.1:15352654-15352673 | MS.gene023430:intron | 35.0% | |
TGAATAAACAATAGTTGGGG+AGG | + | chr4.1:15355553-15355572 | None:intergenic | 35.0% | |
TGAATGTATTGTCATGGAAC+AGG | - | chr4.1:15354477-15354496 | MS.gene023430:intron | 35.0% | |
TGATACGACAGAAAAGTTGA+AGG | + | chr4.1:15352632-15352651 | None:intergenic | 35.0% | |
TGTCTCATGAATCATCTTGA+AGG | - | chr4.1:15351705-15351724 | MS.gene023430:intron | 35.0% | |
TGTTCATTACCGATCAAATG+GGG | - | chr4.1:15351735-15351754 | MS.gene023430:intron | 35.0% | |
TTATTTGCAGAGTCCATGAA+AGG | + | chr4.1:15355362-15355381 | None:intergenic | 35.0% | |
TTTAGCTACATGATTGTGGT+TGG | - | chr4.1:15353175-15353194 | MS.gene023430:intron | 35.0% | |
TTTCATTGTACTGAGTAGGT+TGG | - | chr4.1:15354568-15354587 | MS.gene023430:CDS | 35.0% | |
! | ACCCAGAAATGCATTTTTGA+AGG | - | chr4.1:15354968-15354987 | MS.gene023430:intron | 35.0% |
! | ATTGGTGACATTGGTAACAT+TGG | - | chr4.1:15351288-15351307 | MS.gene023430:intron | 35.0% |
! | CAGGTATAATTTTTGCCCTT+GGG | - | chr4.1:15353498-15353517 | MS.gene023430:intron | 35.0% |
! | GATATTTTACGTGACACCAT+GGG | - | chr4.1:15351590-15351609 | MS.gene023430:CDS | 35.0% |
! | GGTTTTTCTATATGGGCAAA+GGG | + | chr4.1:15354680-15354699 | None:intergenic | 35.0% |
! | GTTTTTCTATATGGGCAAAG+GGG | + | chr4.1:15354679-15354698 | None:intergenic | 35.0% |
! | TCCATGCTTTTCATATTGGA+TGG | - | chr4.1:15351001-15351020 | MS.gene023430:intron | 35.0% |
! | TCTAATGAGTTGAAGTTTGC+TGG | - | chr4.1:15353119-15353138 | MS.gene023430:intron | 35.0% |
! | TCTCTCCATGCTTTTCATAT+TGG | - | chr4.1:15350997-15351016 | MS.gene023430:intron | 35.0% |
! | TGAAACTGATGACTCTGAAA+TGG | - | chr4.1:15352127-15352146 | MS.gene023430:CDS | 35.0% |
! | TGACATAGAATTGGTGACAT+TGG | - | chr4.1:15351279-15351298 | MS.gene023430:CDS | 35.0% |
! | TGGTTTTTCTATATGGGCAA+AGG | + | chr4.1:15354681-15354700 | None:intergenic | 35.0% |
!! | ATACTAGCTCTGAACTTTGT+CGG | + | chr4.1:15353444-15353463 | None:intergenic | 35.0% |
!! | GGTAACGGAAAAGTTGATAT+TGG | - | chr4.1:15351756-15351775 | MS.gene023430:intron | 35.0% |
!! | TTAAATTTTAGCGGCAGCTA+AGG | - | chr4.1:15353716-15353735 | MS.gene023430:intron | 35.0% |
!! | TTGTCCCTGTTTCAAGTTAA+AGG | + | chr4.1:15355896-15355915 | None:intergenic | 35.0% |
!!! | AGGTATTCAGCATTGACTTT+TGG | - | chr4.1:15354497-15354516 | MS.gene023430:intron | 35.0% |
!!! | GCAAATTGCACTGATTGTTT+TGG | - | chr4.1:15352853-15352872 | MS.gene023430:CDS | 35.0% |
AAAGGCAAAGAGCAAGAACA+AGG | - | chr4.1:15350747-15350766 | MS.gene023430:CDS | 40.0% | |
AACATTGTCAAAGGGATGCT+TGG | + | chr4.1:15352930-15352949 | None:intergenic | 40.0% | |
AAGAAAGGTCCCATATTCTG+TGG | + | chr4.1:15355456-15355475 | None:intergenic | 40.0% | |
AAGGAACTTCTAGATGCACT+TGG | - | chr4.1:15354987-15355006 | MS.gene023430:intron | 40.0% | |
ACATTGTCAAAGGGATGCTT+GGG | + | chr4.1:15352929-15352948 | None:intergenic | 40.0% | |
ACGTCTCTTCCCAGAAATAT+TGG | + | chr4.1:15352090-15352109 | None:intergenic | 40.0% | |
AGAGCTTGGAATTGTAACTG+AGG | - | chr4.1:15353033-15353052 | MS.gene023430:intron | 40.0% | |
AGGATTCACAATGGGAATAG+AGG | - | chr4.1:15352797-15352816 | MS.gene023430:CDS | 40.0% | |
AGTAACCTCATTTGTACCCA+AGG | + | chr4.1:15353517-15353536 | None:intergenic | 40.0% | |
ATACCGACACTTCTGATTGA+AGG | + | chr4.1:15351451-15351470 | None:intergenic | 40.0% | |
ATAGTATGTACTGCAGCAGA+TGG | - | chr4.1:15355961-15355980 | MS.gene023430:intron | 40.0% | |
ATCCAATCACATCCATTGAG+TGG | - | chr4.1:15355172-15355191 | MS.gene023430:intron | 40.0% | |
ATCCCCATATATGTGCATCT+TGG | - | chr4.1:15352380-15352399 | MS.gene023430:CDS | 40.0% | |
ATGAAGGCTATGCTATAGAC+TGG | - | chr4.1:15353970-15353989 | MS.gene023430:intron | 40.0% | |
CAATATGGGATACTCGTTTG+GGG | - | chr4.1:15354414-15354433 | MS.gene023430:CDS | 40.0% | |
CAGAATATGGGACCTTTCTT+TGG | - | chr4.1:15355456-15355475 | MS.gene023430:intron | 40.0% | |
CCAAGGGCAAAAATTATACC+TGG | + | chr4.1:15353500-15353519 | None:intergenic | 40.0% | |
CGGCATAAAACATCGTCAAA+AGG | - | chr4.1:15350729-15350748 | MS.gene023430:CDS | 40.0% | |
CTCACGAAGGTTGTATTAAC+CGG | - | chr4.1:15352338-15352357 | MS.gene023430:CDS | 40.0% | |
CTGTCAGTATGTCCAGTAAA+AGG | + | chr4.1:15354198-15354217 | None:intergenic | 40.0% | |
GAAACGGAGTGAATCATCTT+CGG | - | chr4.1:15350876-15350895 | MS.gene023430:intron | 40.0% | |
GAATTCGTCCAACAATTCTG+TGG | + | chr4.1:15355285-15355304 | None:intergenic | 40.0% | |
GACATGAGCTCTCATCTTAA+TGG | - | chr4.1:15353870-15353889 | MS.gene023430:intron | 40.0% | |
GAGCAAGAAGCAAAAACATG+AGG | + | chr4.1:15354377-15354396 | None:intergenic | 40.0% | |
GAGTCATCAGTTTCACGTTT+AGG | + | chr4.1:15352122-15352141 | None:intergenic | 40.0% | |
GATAGTGAAGACGAAGAAGA+AGG | - | chr4.1:15352176-15352195 | MS.gene023430:intron | 40.0% | |
GCAAAAACATGAGGTTCTGT+AGG | + | chr4.1:15354368-15354387 | None:intergenic | 40.0% | |
GCAATATGGGATACTCGTTT+GGG | - | chr4.1:15354413-15354432 | MS.gene023430:CDS | 40.0% | |
GCACTTGAGTGACATAGAAT+TGG | + | chr4.1:15351387-15351406 | None:intergenic | 40.0% | |
GCAGTACATACTATCATTCC+AGG | + | chr4.1:15355955-15355974 | None:intergenic | 40.0% | |
GCCATCCAATATGAAAAGCA+TGG | + | chr4.1:15351005-15351024 | None:intergenic | 40.0% | |
GCTCAACAATGAGTACGTTT+GGG | - | chr4.1:15355594-15355613 | MS.gene023430:intron | 40.0% | |
GCTTGGGTAATGACAAAATC+TGG | + | chr4.1:15352913-15352932 | None:intergenic | 40.0% | |
GCTTGTATCCGGTAATCATT+GGG | - | chr4.1:15354013-15354032 | MS.gene023430:intron | 40.0% | |
GGATTCACAATGGGAATAGA+GGG | - | chr4.1:15352798-15352817 | MS.gene023430:CDS | 40.0% | |
GTAACCTCATTTGTACCCAA+GGG | + | chr4.1:15353516-15353535 | None:intergenic | 40.0% | |
GTATTCAAAATGCGCTACCA+CGG | + | chr4.1:15355145-15355164 | None:intergenic | 40.0% | |
GTATTTCATTACAGGGACAC+AGG | - | chr4.1:15351643-15351662 | MS.gene023430:intron | 40.0% | |
TACACCATCCACAGAATTGT+TGG | - | chr4.1:15355274-15355293 | MS.gene023430:intron | 40.0% | |
TCAACTTCAACACAGTCAAG+AGG | + | chr4.1:15352270-15352289 | None:intergenic | 40.0% | |
TCAGACTGCTTAAGGTATGT+TGG | - | chr4.1:15354645-15354664 | MS.gene023430:CDS | 40.0% | |
TCCCCATATATGTGCATCTT+GGG | - | chr4.1:15352381-15352400 | MS.gene023430:CDS | 40.0% | |
TGCAATATGGGATACTCGTT+TGG | - | chr4.1:15354412-15354431 | MS.gene023430:CDS | 40.0% | |
TGCCCAAGATGCACATATAT+GGG | + | chr4.1:15352386-15352405 | None:intergenic | 40.0% | |
TGCTCAACAATGAGTACGTT+TGG | - | chr4.1:15355593-15355612 | MS.gene023430:intron | 40.0% | |
TGGAGAGAATTGTAAGCAGA+AGG | + | chr4.1:15350985-15351004 | None:intergenic | 40.0% | |
TGGATGTGATTGGATGCTTA+TGG | + | chr4.1:15355167-15355186 | None:intergenic | 40.0% | |
TTACCGATCAAATGGGGTAA+CGG | - | chr4.1:15351741-15351760 | MS.gene023430:intron | 40.0% | |
TTCTGTTCGAACTAAACCCA+TGG | + | chr4.1:15351609-15351628 | None:intergenic | 40.0% | |
TTGTAACTGAGGACTCGATT+TGG | - | chr4.1:15353044-15353063 | MS.gene023430:intron | 40.0% | |
TTTCCGTTACCCCATTTGAT+CGG | + | chr4.1:15351747-15351766 | None:intergenic | 40.0% | |
! | ACACCTTCAATCAGAAGTGT+CGG | - | chr4.1:15351445-15351464 | MS.gene023430:intron | 40.0% |
! | ATGGGACCTTTCTTTGGAAA+AGG | - | chr4.1:15355462-15355481 | MS.gene023430:intron | 40.0% |
! | CCAGGTATAATTTTTGCCCT+TGG | - | chr4.1:15353497-15353516 | MS.gene023430:intron | 40.0% |
! | CGATATTTTACGTGACACCA+TGG | - | chr4.1:15351589-15351608 | MS.gene023430:CDS | 40.0% |
! | GTCGGTATTTAGAGTTCAAG+AGG | - | chr4.1:15351463-15351482 | MS.gene023430:intron | 40.0% |
! | TAGGTTGGCTAGTTGTATGT+TGG | - | chr4.1:15354583-15354602 | MS.gene023430:CDS | 40.0% |
! | TATATGGGGATTTTGTGCCA+TGG | + | chr4.1:15352371-15352390 | None:intergenic | 40.0% |
!! | ACTGATGACTCTGAAATGGA+TGG | - | chr4.1:15352131-15352150 | MS.gene023430:CDS | 40.0% |
!! | AGGAGCGTTTACTTGTTCTT+GGG | + | chr4.1:15355521-15355540 | None:intergenic | 40.0% |
!! | AGTTGAAGGGTGCCAAATAA+TGG | + | chr4.1:15352618-15352637 | None:intergenic | 40.0% |
!! | ATATTGGATGGCCTTGTCTT+AGG | - | chr4.1:15351013-15351032 | MS.gene023430:intron | 40.0% |
!! | CTTTGGGTTTTACCCTTTCA+TGG | - | chr4.1:15355346-15355365 | MS.gene023430:intron | 40.0% |
!! | GTTCCGAAAAAGGTATTGCT+TGG | + | chr4.1:15354252-15354271 | None:intergenic | 40.0% |
AAGACCCCAAAGAACTGCAT+TGG | - | chr4.1:15355917-15355936 | MS.gene023430:intron | 45.0% | |
AGTGAAGACGAAGAAGAAGG+TGG | - | chr4.1:15352179-15352198 | MS.gene023430:intron | 45.0% | |
ATCAACTCCTTGGACACCTT+CGG | + | chr4.1:15353913-15353932 | None:intergenic | 45.0% | |
CAAGAAGATTTCTCAGCCTG+GGG | + | chr4.1:15352041-15352060 | None:intergenic | 45.0% | |
CACTAGCAGATAGCATCACA+AGG | + | chr4.1:15351876-15351895 | None:intergenic | 45.0% | |
CCAAGAAGATTTCTCAGCCT+GGG | + | chr4.1:15352042-15352061 | None:intergenic | 45.0% | |
CTCCACTCAATGGATGTGAT+TGG | + | chr4.1:15355177-15355196 | None:intergenic | 45.0% | |
CTGCCCAAGATGCACATATA+TGG | + | chr4.1:15352387-15352406 | None:intergenic | 45.0% | |
GCACTTGGGTGACATAGAAT+TGG | - | chr4.1:15351270-15351289 | MS.gene023430:CDS | 45.0% | |
GCCCAAGATGCACATATATG+GGG | + | chr4.1:15352385-15352404 | None:intergenic | 45.0% | |
GGCTTGTATCCGGTAATCAT+TGG | - | chr4.1:15354012-15354031 | MS.gene023430:intron | 45.0% | |
GTGTGCCAATGCAGTTCTTT+GGG | + | chr4.1:15355925-15355944 | None:intergenic | 45.0% | |
GTTGTGGCTGAATAGCACAA+AGG | - | chr4.1:15352777-15352796 | MS.gene023430:CDS | 45.0% | |
TAATATGTTGCATGTGCCCC+AGG | - | chr4.1:15352022-15352041 | MS.gene023430:intron | 45.0% | |
TACACCGACACAAGTGACTA+CGG | + | chr4.1:15351413-15351432 | None:intergenic | 45.0% | |
TAGTCACTTGGGTAGCACTT+GGG | - | chr4.1:15351256-15351275 | MS.gene023430:CDS | 45.0% | |
TATTAACCGGATACGCTCCA+TGG | - | chr4.1:15352351-15352370 | MS.gene023430:CDS | 45.0% | |
TATTATCTCCCGACCTGTTG+TGG | + | chr4.1:15353418-15353437 | None:intergenic | 45.0% | |
TCCAAGAAGATTTCTCAGCC+TGG | + | chr4.1:15352043-15352062 | None:intergenic | 45.0% | |
TCCACACGAAGCTTCTTCAT+TGG | - | chr4.1:15355197-15355216 | MS.gene023430:intron | 45.0% | |
TCGAGCCACTAATAGCATGT+AGG | + | chr4.1:15352662-15352681 | None:intergenic | 45.0% | |
TCGTCCAACAATTCTGTGGA+TGG | + | chr4.1:15355281-15355300 | None:intergenic | 45.0% | |
TCGTGATCTCAGACTGCTTA+AGG | - | chr4.1:15354637-15354656 | MS.gene023430:CDS | 45.0% | |
TCTGTTCACACCTACAGTTG+CGG | - | chr4.1:15352308-15352327 | MS.gene023430:CDS | 45.0% | |
TCTTCCAACTTATCCACACC+AGG | + | chr4.1:15350940-15350959 | None:intergenic | 45.0% | |
TGAATAGGAAGGAGATTCCG+TGG | - | chr4.1:15355125-15355144 | MS.gene023430:CDS | 45.0% | |
TGTGCCAATGCAGTTCTTTG+GGG | + | chr4.1:15355924-15355943 | None:intergenic | 45.0% | |
TGTGTGCCAATGCAGTTCTT+TGG | + | chr4.1:15355926-15355945 | None:intergenic | 45.0% | |
TGTTCAATGAACCCTTGCAG+TGG | - | chr4.1:15354339-15354358 | MS.gene023430:CDS | 45.0% | |
TTCCATGTTGCAGCAGATGT+AGG | + | chr4.1:15354162-15354181 | None:intergenic | 45.0% | |
TTGGCTAAGGACCAGTCATA+GGG | + | chr4.1:15352441-15352460 | None:intergenic | 45.0% | |
TTTGCCCTTGGGTACAAATG+AGG | - | chr4.1:15353509-15353528 | MS.gene023430:intron | 45.0% | |
TTTGGAAAAGGACGAGGAAG+AGG | - | chr4.1:15355474-15355493 | MS.gene023430:intron | 45.0% | |
! | CCGCCAAGCAATACCTTTTT+CGG | - | chr4.1:15354246-15354265 | MS.gene023430:intron | 45.0% |
! | CCTCGTCCTTTTCCAAAGAA+AGG | + | chr4.1:15355471-15355490 | None:intergenic | 45.0% |
! | CCTTTCTTTGGAAAAGGACG+AGG | - | chr4.1:15355468-15355487 | MS.gene023430:intron | 45.0% |
! | TATTTCTGCGGTTCCACAAC+AGG | - | chr4.1:15353402-15353421 | MS.gene023430:intron | 45.0% |
! | TGTTGGTAGGTTCACAAGTC+AGG | + | chr4.1:15353369-15353388 | None:intergenic | 45.0% |
!! | CAGGAGCGTTTACTTGTTCT+TGG | + | chr4.1:15355522-15355541 | None:intergenic | 45.0% |
!! | CCGAAAAAGGTATTGCTTGG+CGG | + | chr4.1:15354249-15354268 | None:intergenic | 45.0% |
!! | TGACTCTGAAATGGATGGTG+AGG | - | chr4.1:15352136-15352155 | MS.gene023430:CDS | 45.0% |
!! | TGCGTCTTTTCAAGCACACA+AGG | - | chr4.1:15354448-15354467 | MS.gene023430:intron | 45.0% |
!! | TGTTTTTGCTTCTTGCTCCG+TGG | - | chr4.1:15354379-15354398 | MS.gene023430:CDS | 45.0% |
ACACCGACACAAGTGACTAC+GGG | + | chr4.1:15351412-15351431 | None:intergenic | 50.0% | |
ACGGAGTGAATCATCTTCGG+CGG | - | chr4.1:15350879-15350898 | MS.gene023430:intron | 50.0% | |
ACTGGAGTCCTCTTGTTCCA+GGG | - | chr4.1:15353988-15354007 | MS.gene023430:intron | 50.0% | |
AGCCTACATCTGCTGCAACA+TGG | - | chr4.1:15354157-15354176 | MS.gene023430:intron | 50.0% | |
AGCGGCAGCTAAGGTTGTTA+AGG | - | chr4.1:15353725-15353744 | MS.gene023430:intron | 50.0% | |
AGGTTCACAAGTCAGGTCGT+GGG | + | chr4.1:15353362-15353381 | None:intergenic | 50.0% | |
CACAGGTTCCGGTAAAAGTG+TGG | - | chr4.1:15350911-15350930 | MS.gene023430:intron | 50.0% | |
CATTGGCACACACAGATTCC+TGG | - | chr4.1:15355934-15355953 | MS.gene023430:intron | 50.0% | |
CCCAGGCTGAGAAATCTTCT+TGG | - | chr4.1:15352039-15352058 | MS.gene023430:intron | 50.0% | |
CCTGAACTGCATCAACTCCT+TGG | + | chr4.1:15353923-15353942 | None:intergenic | 50.0% | |
CTACCCGTAGTCACTTGTGT+CGG | - | chr4.1:15351406-15351425 | MS.gene023430:intron | 50.0% | |
CTAGCAGAGACAGAAACCGA+AGG | - | chr4.1:15353894-15353913 | MS.gene023430:intron | 50.0% | |
CTTGGCTAAGGACCAGTCAT+AGG | + | chr4.1:15352442-15352461 | None:intergenic | 50.0% | |
GAGTTACCTTCCGCAACTGT+AGG | + | chr4.1:15352321-15352340 | None:intergenic | 50.0% | |
GCAACCTGGTGTGGATAAGT+TGG | - | chr4.1:15350933-15350952 | MS.gene023430:intron | 50.0% | |
GCCAATGAAGAAGCTTCGTG+TGG | + | chr4.1:15355201-15355220 | None:intergenic | 50.0% | |
GCCGATCACAATGTCACAAG+CGG | - | chr4.1:15351310-15351329 | MS.gene023430:intron | 50.0% | |
GCCGCTTGTGACATTGTGAT+CGG | + | chr4.1:15351314-15351333 | None:intergenic | 50.0% | |
GCGGCAGCTAAGGTTGTTAA+GGG | - | chr4.1:15353726-15353745 | MS.gene023430:intron | 50.0% | |
GCTAGTTGTATGTTGGCGTC+GGG | - | chr4.1:15354590-15354609 | MS.gene023430:CDS | 50.0% | |
GGTCCCATATTCTGTGGCAA+AGG | + | chr4.1:15355450-15355469 | None:intergenic | 50.0% | |
GTAGTCACTTGGGTAGCACT+TGG | - | chr4.1:15351255-15351274 | MS.gene023430:CDS | 50.0% | |
TACCTGCAAAGTAGGACCAC+CGG | + | chr4.1:15352207-15352226 | None:intergenic | 50.0% | |
TAGGTTCACAAGTCAGGTCG+TGG | + | chr4.1:15353363-15353382 | None:intergenic | 50.0% | |
TATGGGATACTCGTTTGGGG+AGG | - | chr4.1:15354417-15354436 | MS.gene023430:CDS | 50.0% | |
TCATGCAGCTTCTGATGGCA+AGG | + | chr4.1:15356022-15356041 | None:intergenic | 50.0% | |
TGTGCATCTTGGGCAGAATC+TGG | - | chr4.1:15352391-15352410 | MS.gene023430:intron | 50.0% | |
TGTGCTTGAAAAGACGCAGC+TGG | + | chr4.1:15354446-15354465 | None:intergenic | 50.0% | |
TTCACACCTACAGTTGCGGA+AGG | - | chr4.1:15352312-15352331 | MS.gene023430:CDS | 50.0% | |
TTCGTGTGGACTCCACTCAA+TGG | + | chr4.1:15355187-15355206 | None:intergenic | 50.0% | |
TTGCGGAAGGTAACTCACGA+AGG | - | chr4.1:15352325-15352344 | MS.gene023430:CDS | 50.0% | |
TTTGTGCCATGGAGCGTATC+CGG | + | chr4.1:15352360-15352379 | None:intergenic | 50.0% | |
! | AAAAGTGTGGCAACCTGGTG+TGG | - | chr4.1:15350924-15350943 | MS.gene023430:intron | 50.0% |
! | AAATCTGGGACATCAGCCCA+TGG | + | chr4.1:15352898-15352917 | None:intergenic | 50.0% |
! | CACACTTTTACCGGAACCTG+TGG | + | chr4.1:15350913-15350932 | None:intergenic | 50.0% |
! | CCAGGTTGCCACACTTTTAC+CGG | + | chr4.1:15350922-15350941 | None:intergenic | 50.0% |
! | CTTGTGTCGGTGTAGTACAC+TGG | - | chr4.1:15351419-15351438 | MS.gene023430:intron | 50.0% |
! | GGCTAGTTGTATGTTGGCGT+CGG | - | chr4.1:15354589-15354608 | MS.gene023430:CDS | 50.0% |
! | TGGTGAGGATAGTGATAGCG+AGG | - | chr4.1:15352151-15352170 | MS.gene023430:CDS | 50.0% |
!! | ACAGAAACCGAAGGTGTCCA+AGG | - | chr4.1:15353903-15353922 | MS.gene023430:intron | 50.0% |
!! | CCAAGGAGTTGATGCAGTTC+AGG | - | chr4.1:15353920-15353939 | MS.gene023430:intron | 50.0% |
!! | CTAGCTCTGAACTTTGTCGG+AGG | + | chr4.1:15353441-15353460 | None:intergenic | 50.0% |
!! | GAGGGTGTTACCTGCAAAGT+AGG | + | chr4.1:15352215-15352234 | None:intergenic | 50.0% |
ACAAGCCTCCCTGGAACAAG+AGG | + | chr4.1:15353999-15354018 | None:intergenic | 55.0% | |
AGTTGGGGAGGCAGATCTTC+AGG | + | chr4.1:15355541-15355560 | None:intergenic | 55.0% | |
GACGAAGAAGAAGGTGGTGC+CGG | - | chr4.1:15352185-15352204 | MS.gene023430:intron | 55.0% | |
GACTGGAGTCCTCTTGTTCC+AGG | - | chr4.1:15353987-15354006 | MS.gene023430:intron | 55.0% | |
GAGTGAATCATCTTCGGCGG+CGG | - | chr4.1:15350882-15350901 | MS.gene023430:intron | 55.0% | |
GGAAAAGGACGAGGAAGAGG+AGG | - | chr4.1:15355477-15355496 | MS.gene023430:intron | 55.0% | |
GGCAGAATCTGGTCATGTGC+AGG | - | chr4.1:15352402-15352421 | MS.gene023430:intron | 55.0% | |
GTTCCAGGGAGGCTTGTATC+CGG | - | chr4.1:15354002-15354021 | MS.gene023430:intron | 55.0% | |
TCTGCGGTTCCACAACAGGT+CGG | - | chr4.1:15353406-15353425 | MS.gene023430:intron | 55.0% | |
TCTGTAGGGCTCCACTGCAA+GGG | + | chr4.1:15354353-15354372 | None:intergenic | 55.0% | |
TTACCGGATACAAGCCTCCC+TGG | + | chr4.1:15354008-15354027 | None:intergenic | 55.0% | |
TTCTGTAGGGCTCCACTGCA+AGG | + | chr4.1:15354354-15354373 | None:intergenic | 55.0% | |
! | CCGGTAAAAGTGTGGCAACC+TGG | - | chr4.1:15350919-15350938 | MS.gene023430:intron | 55.0% |
! | TGGCGTCGGGTAGTGATGAT+GGG | - | chr4.1:15354603-15354622 | MS.gene023430:CDS | 55.0% |
! | TTCTGGGAAGAGACGTGAGC+TGG | - | chr4.1:15352094-15352113 | MS.gene023430:intron | 55.0% |
! | TTGGCGTCGGGTAGTGATGA+TGG | - | chr4.1:15354602-15354621 | MS.gene023430:CDS | 55.0% |
CTGCGGTTCCACAACAGGTC+GGG | - | chr4.1:15353407-15353426 | MS.gene023430:intron | 60.0% | |
GGAGTCCTCTTGTTCCAGGG+AGG | - | chr4.1:15353991-15354010 | MS.gene023430:intron | 60.0% | |
TGAATCATCTTCGGCGGCGG+CGG | - | chr4.1:15350885-15350904 | MS.gene023430:intron | 60.0% | |
TGCCGGTGGTCCTACTTTGC+AGG | - | chr4.1:15352202-15352221 | MS.gene023430:intron | 60.0% | |
! | GAAGAAGAAGGTGGTGCCGG+TGG | - | chr4.1:15352188-15352207 | MS.gene023430:intron | 60.0% |
! | GGCGGCGGCGCCACAGGTTC+CGG | - | chr4.1:15350900-15350919 | MS.gene023430:intron | 80.0% |
! | TTCGGCGGCGGCGGCGCCAC+AGG | - | chr4.1:15350894-15350913 | MS.gene023430:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 15350721 | 15356041 | 15350721 | ID=MS.gene023430 |
chr4.1 | mRNA | 15350721 | 15356041 | 15350721 | ID=MS.gene023430.t1;Parent=MS.gene023430 |
chr4.1 | exon | 15355994 | 15356041 | 15355994 | ID=MS.gene023430.t1.exon1;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15355994 | 15356041 | 15355994 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15355728 | 15355885 | 15355728 | ID=MS.gene023430.t1.exon2;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15355728 | 15355885 | 15355728 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15355098 | 15355176 | 15355098 | ID=MS.gene023430.t1.exon3;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15355098 | 15355176 | 15355098 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15354539 | 15354718 | 15354539 | ID=MS.gene023430.t1.exon4;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15354539 | 15354718 | 15354539 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15354339 | 15354437 | 15354339 | ID=MS.gene023430.t1.exon5;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15354339 | 15354437 | 15354339 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15352739 | 15352898 | 15352739 | ID=MS.gene023430.t1.exon6;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15352739 | 15352898 | 15352739 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15352529 | 15352635 | 15352529 | ID=MS.gene023430.t1.exon7;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15352529 | 15352635 | 15352529 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15352264 | 15352403 | 15352264 | ID=MS.gene023430.t1.exon8;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15352264 | 15352403 | 15352264 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15352104 | 15352176 | 15352104 | ID=MS.gene023430.t1.exon9;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15352104 | 15352176 | 15352104 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15351515 | 15351630 | 15351515 | ID=MS.gene023430.t1.exon10;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15351515 | 15351630 | 15351515 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15351186 | 15351303 | 15351186 | ID=MS.gene023430.t1.exon11;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15351186 | 15351303 | 15351186 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
chr4.1 | exon | 15350721 | 15350852 | 15350721 | ID=MS.gene023430.t1.exon12;Parent=MS.gene023430.t1 |
chr4.1 | CDS | 15350721 | 15350852 | 15350721 | ID=cds.MS.gene023430.t1;Parent=MS.gene023430.t1 |
Gene Sequence |
Protein sequence |