Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023431.t1 | XP_013446579.1 | 98.7 | 469 | 6 | 0 | 1 | 469 | 1 | 469 | 2.10E-214 | 755 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023431.t1 | Q9BQ67 | 41.0 | 432 | 227 | 8 | 31 | 454 | 29 | 440 | 9.6e-67 | 255.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023431.t1 | A0A072TTT6 | 98.7 | 469 | 6 | 0 | 1 | 469 | 1 | 469 | 1.5e-214 | 755.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene023431 | MS.gene26959 | PPI |
MS.gene023431 | MS.gene07852 | PPI |
MS.gene023431 | MS.gene052717 | PPI |
MS.gene023431 | MS.gene24284 | PPI |
MS.gene023431 | MS.gene27317 | PPI |
MS.gene53345 | MS.gene023431 | PPI |
MS.gene023431 | MS.gene053297 | PPI |
MS.gene023431 | MS.gene011268 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023431.t1 | MTR_8g080700 | 98.934 | 469 | 5 | 0 | 1 | 469 | 1 | 469 | 0.0 | 960 |
MS.gene023431.t1 | MTR_5g024090 | 77.802 | 464 | 90 | 7 | 1 | 460 | 1 | 455 | 0.0 | 689 |
MS.gene023431.t1 | MTR_4g096880 | 29.262 | 393 | 214 | 12 | 52 | 428 | 29 | 373 | 2.95e-34 | 133 |
MS.gene023431.t1 | MTR_2g039250 | 30.218 | 321 | 182 | 10 | 155 | 450 | 151 | 454 | 1.06e-31 | 127 |
MS.gene023431.t1 | MTR_4g073080 | 30.100 | 299 | 174 | 9 | 157 | 450 | 109 | 377 | 9.08e-29 | 117 |
MS.gene023431.t1 | MTR_2g100090 | 27.246 | 334 | 185 | 12 | 155 | 450 | 110 | 423 | 1.82e-25 | 109 |
MS.gene023431.t1 | MTR_2g016160 | 25.974 | 231 | 144 | 8 | 216 | 432 | 99 | 316 | 3.33e-16 | 79.7 |
MS.gene023431.t1 | MTR_1g054300 | 33.766 | 154 | 91 | 6 | 236 | 389 | 339 | 481 | 1.85e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023431.t1 | AT2G19540 | 70.089 | 448 | 130 | 3 | 23 | 467 | 20 | 466 | 0.0 | 640 |
MS.gene023431.t1 | AT5G58230 | 28.894 | 398 | 209 | 11 | 52 | 428 | 29 | 373 | 3.11e-36 | 139 |
MS.gene023431.t1 | AT2G16780 | 29.114 | 316 | 191 | 8 | 146 | 450 | 92 | 385 | 7.21e-34 | 132 |
MS.gene023431.t1 | AT4G35050 | 29.114 | 316 | 191 | 9 | 146 | 450 | 93 | 386 | 3.90e-32 | 127 |
MS.gene023431.t1 | AT2G19520 | 28.440 | 327 | 183 | 10 | 155 | 450 | 157 | 463 | 1.31e-27 | 115 |
MS.gene023431.t1 | AT4G29730 | 27.950 | 322 | 181 | 10 | 155 | 445 | 137 | 438 | 1.22e-26 | 112 |
MS.gene023431.t1 | AT4G29730 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 6.15e-25 | 107 |
MS.gene023431.t1 | AT4G29730 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 6.15e-25 | 107 |
MS.gene023431.t1 | AT1G29260 | 28.108 | 185 | 114 | 6 | 216 | 394 | 98 | 269 | 1.25e-14 | 75.1 |
MS.gene023431.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 141 | 321 | 3.41e-12 | 68.2 |
MS.gene023431.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 3.66e-12 | 68.2 |
MS.gene023431.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 4.15e-12 | 67.8 |
MS.gene023431.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 84 | 264 | 5.13e-12 | 67.4 |
Find 122 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAAGTATCCAATATTTC+TGG | 0.186014 | 4.1:-15341077 | MS.gene023431:CDS |
CAGGAGCGTTTACTTGTTCT+TGG | 0.192683 | 4.1:+15337637 | None:intergenic |
CAGAATATGGGACCTTTCTT+TGG | 0.220480 | 4.1:-15337700 | MS.gene023431:CDS |
ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 4.1:-15342139 | MS.gene023431:intron |
AAATCTTCTTGGAATTCTAT+TGG | 0.257950 | 4.1:-15341104 | MS.gene023431:CDS |
CTGCCCAAGATGCACATATA+TGG | 0.270395 | 4.1:+15340770 | None:intergenic |
TGGATAAAAGCATTGCAATA+TGG | 0.287928 | 4.1:-15338757 | MS.gene023431:CDS |
CACACAGTGTATTTCATTAC+AGG | 0.300493 | 4.1:-15341517 | MS.gene023431:CDS |
TGTGTGCCAATGCAGTTCTT+TGG | 0.305295 | 4.1:+15337233 | None:intergenic |
TGCAATATGGGATACTCGTT+TGG | 0.310651 | 4.1:-15338744 | MS.gene023431:CDS |
GTGTGCCAATGCAGTTCTTT+GGG | 0.311930 | 4.1:+15337234 | None:intergenic |
AATCTTCTTGGAATTCTATT+GGG | 0.321921 | 4.1:-15341103 | MS.gene023431:CDS |
GGCGGCGGCGCCACAGGTTC+CGG | 0.327760 | 4.1:-15342252 | MS.gene023431:CDS |
CTGTCAGTATGTCCAGTAAA+AGG | 0.330541 | 4.1:+15338961 | None:intergenic |
GACATGAGCTCTCATCTTAA+TGG | 0.333584 | 4.1:-15339286 | MS.gene023431:CDS |
AGTTGGGGAGGCAGATCTTC+AGG | 0.338811 | 4.1:+15337618 | None:intergenic |
GACTGGAGTCCTCTTGTTCC+AGG | 0.347996 | 4.1:-15339169 | MS.gene023431:CDS |
GCAATATGGGATACTCGTTT+GGG | 0.354043 | 4.1:-15338743 | MS.gene023431:CDS |
TGCCGGTGGTCCTACTTTGC+AGG | 0.355683 | 4.1:-15340952 | MS.gene023431:intron |
ACGTCTCTTCCCAGAAATAT+TGG | 0.357236 | 4.1:+15341067 | None:intergenic |
TTCGGCGGCGGCGGCGCCAC+AGG | 0.362085 | 4.1:-15342258 | MS.gene023431:CDS |
CCAAGGAGTTGATGCAGTTC+AGG | 0.373931 | 4.1:-15339236 | MS.gene023431:CDS |
CATTGGCACACACAGATTCC+TGG | 0.384701 | 4.1:-15337222 | MS.gene023431:CDS |
CCCAGGCTGAGAAATCTTCT+TGG | 0.387294 | 4.1:-15341115 | MS.gene023431:intron |
CTCACGAAGGTTGTATTAAC+CGG | 0.388862 | 4.1:-15340816 | MS.gene023431:CDS |
TGAAACTGATGACTCTGAAA+TGG | 0.392830 | 4.1:-15341027 | MS.gene023431:CDS |
ATCAACTCCTTGGACACCTT+CGG | 0.400128 | 4.1:+15339246 | None:intergenic |
CCTGGTGAATAAACAATAGT+TGG | 0.407860 | 4.1:+15337601 | None:intergenic |
TCGTGATCTCAGACTGCTTA+AGG | 0.409527 | 4.1:-15338519 | MS.gene023431:intron |
GAGTCATCAGTTTCACGTTT+AGG | 0.409980 | 4.1:+15341035 | None:intergenic |
GGATAAAAGCATTGCAATAT+GGG | 0.421297 | 4.1:-15338756 | MS.gene023431:CDS |
ATGGGACCTTTCTTTGGAAA+AGG | 0.423598 | 4.1:-15337694 | MS.gene023431:CDS |
TGCCCAAGATGCACATATAT+GGG | 0.425064 | 4.1:+15340771 | None:intergenic |
CTGGTGAATAAACAATAGTT+GGG | 0.426771 | 4.1:+15337602 | None:intergenic |
TGTGCATCTTGGGCAGAATC+TGG | 0.430129 | 4.1:-15340763 | MS.gene023431:CDS |
GGCTAGTTGTATGTTGGCGT+CGG | 0.431422 | 4.1:-15338567 | MS.gene023431:CDS |
TCCCCATATATGTGCATCTT+GGG | 0.431645 | 4.1:-15340773 | MS.gene023431:CDS |
AGGAGCGTTTACTTGTTCTT+GGG | 0.432127 | 4.1:+15337638 | None:intergenic |
TTTGTGCCATGGAGCGTATC+CGG | 0.432906 | 4.1:+15340797 | None:intergenic |
TGAATCATCTTCGGCGGCGG+CGG | 0.433527 | 4.1:-15342267 | MS.gene023431:CDS |
GCAGTACATACTATCATTCC+AGG | 0.440018 | 4.1:+15337204 | None:intergenic |
TTAAAGTATCCAATATTTCT+GGG | 0.447355 | 4.1:-15341076 | MS.gene023431:CDS |
TCCACACGAAGCTTCTTCAT+TGG | 0.452856 | 4.1:-15337959 | MS.gene023431:CDS |
ATCCCCATATATGTGCATCT+TGG | 0.460743 | 4.1:-15340774 | MS.gene023431:CDS |
CCTGAACTGCATCAACTCCT+TGG | 0.464940 | 4.1:+15339236 | None:intergenic |
CCAACTATTGTTTATTCACC+AGG | 0.472482 | 4.1:-15337601 | MS.gene023431:intron |
TGGATGTGATTGGATGCTTA+TGG | 0.478480 | 4.1:+15337992 | None:intergenic |
TTTGGAAAAGGACGAGGAAG+AGG | 0.483191 | 4.1:-15337682 | MS.gene023431:CDS |
GCTAGTTGTATGTTGGCGTC+GGG | 0.490510 | 4.1:-15338566 | MS.gene023431:CDS |
AAGGTGCTTTGAATATTTGA+AGG | 0.491981 | 4.1:+15337156 | None:intergenic |
TTGGCGTCGGGTAGTGATGA+TGG | 0.493276 | 4.1:-15338554 | MS.gene023431:CDS |
ATGAAGGCTATGCTATAGAC+TGG | 0.496426 | 4.1:-15339186 | MS.gene023431:CDS |
CCGGTAAAAGTGTGGCAACC+TGG | 0.501960 | 4.1:-15342233 | MS.gene023431:CDS |
TGAATGTATTGTCATGGAAC+AGG | 0.507712 | 4.1:-15338679 | MS.gene023431:intron |
AATCCTTTGCCACAGAATAT+GGG | 0.508159 | 4.1:-15337712 | MS.gene023431:intron |
CTCCACTCAATGGATGTGAT+TGG | 0.514101 | 4.1:+15337982 | None:intergenic |
GTTCCAGGGAGGCTTGTATC+CGG | 0.514187 | 4.1:-15339154 | MS.gene023431:intron |
GGCAGAATCTGGTCATGTGC+AGG | 0.520350 | 4.1:-15340752 | MS.gene023431:intron |
CCTTTCTTTGGAAAAGGACG+AGG | 0.522730 | 4.1:-15337688 | MS.gene023431:CDS |
TTCTGGGAAGAGACGTGAGC+TGG | 0.529788 | 4.1:-15341060 | MS.gene023431:CDS |
GAAACGGAGTGAATCATCTT+CGG | 0.530490 | 4.1:-15342276 | MS.gene023431:CDS |
GACGAAGAAGAAGGTGGTGC+CGG | 0.530693 | 4.1:-15340969 | MS.gene023431:CDS |
CGGCATAAAACATCGTCAAA+AGG | 0.531323 | 4.1:-15342423 | MS.gene023431:CDS |
GATAGTGAAGACGAAGAAGA+AGG | 0.533242 | 4.1:-15340978 | MS.gene023431:CDS |
GAGGGTGTTACCTGCAAAGT+AGG | 0.537218 | 4.1:+15340942 | None:intergenic |
GCAACCTGGTGTGGATAAGT+TGG | 0.537432 | 4.1:-15342219 | MS.gene023431:CDS |
ACAGAAACCGAAGGTGTCCA+AGG | 0.538288 | 4.1:-15339253 | MS.gene023431:CDS |
CAATAATAGTATTTATCTGT+GGG | 0.539902 | 4.1:-15339022 | MS.gene023431:CDS |
TTACCGGATACAAGCCTCCC+TGG | 0.543277 | 4.1:+15339151 | None:intergenic |
AAATTTAAGCACAAAGATGA+AGG | 0.546613 | 4.1:-15339202 | MS.gene023431:CDS |
TTCGTGTGGACTCCACTCAA+TGG | 0.553277 | 4.1:+15337972 | None:intergenic |
GAGTGAATCATCTTCGGCGG+CGG | 0.557113 | 4.1:-15342270 | MS.gene023431:CDS |
GCAATAATAGTATTTATCTG+TGG | 0.558281 | 4.1:-15339023 | MS.gene023431:CDS |
ATAGTATGTACTGCAGCAGA+TGG | 0.561830 | 4.1:-15337195 | MS.gene023431:CDS |
TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 4.1:+15338997 | None:intergenic |
TGGAGAGAATTGTAAGCAGA+AGG | 0.568749 | 4.1:+15342170 | None:intergenic |
ACAAGCCTCCCTGGAACAAG+AGG | 0.572225 | 4.1:+15339160 | None:intergenic |
TGTGCTTGAAAAGACGCAGC+TGG | 0.573745 | 4.1:+15338713 | None:intergenic |
AAGACCCCAAAGAACTGCAT+TGG | 0.573867 | 4.1:-15337239 | MS.gene023431:CDS |
TAGGTTGGCTAGTTGTATGT+TGG | 0.574859 | 4.1:-15338573 | MS.gene023431:CDS |
GCCATCCAATATGAAAAGCA+TGG | 0.576629 | 4.1:+15342150 | None:intergenic |
TTTGAATATTTGAAGGCATG+AGG | 0.577378 | 4.1:+15337163 | None:intergenic |
TCTTCCAACTTATCCACACC+AGG | 0.583170 | 4.1:+15342215 | None:intergenic |
TGTGCCAATGCAGTTCTTTG+GGG | 0.585321 | 4.1:+15337235 | None:intergenic |
AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 4.1:-15338999 | MS.gene023431:CDS |
TTCTGTTCGAACTAAACCCA+TGG | 0.588801 | 4.1:+15341546 | None:intergenic |
AAAAGTGTGGCAACCTGGTG+TGG | 0.591077 | 4.1:-15342228 | MS.gene023431:CDS |
GTATTTCATTACAGGGACAC+AGG | 0.601861 | 4.1:-15341509 | MS.gene023431:intron |
CTGATGTGAATGTATTGTCA+TGG | 0.604527 | 4.1:-15338685 | MS.gene023431:CDS |
TACCTGCAAAGTAGGACCAC+CGG | 0.605560 | 4.1:+15340950 | None:intergenic |
TTACGTAAGTTGATTATCAG+CGG | 0.605575 | 4.1:+15337927 | None:intergenic |
TGGCGTCGGGTAGTGATGAT+GGG | 0.605656 | 4.1:-15338553 | MS.gene023431:CDS |
TATTAACCGGATACGCTCCA+TGG | 0.608736 | 4.1:-15340803 | MS.gene023431:CDS |
ACACAGTGTATTTCATTACA+GGG | 0.609707 | 4.1:-15341516 | MS.gene023431:CDS |
GGAAAAGGACGAGGAAGAGG+AGG | 0.612345 | 4.1:-15337679 | MS.gene023431:CDS |
GAAGAAGAAGGTGGTGCCGG+TGG | 0.612395 | 4.1:-15340966 | MS.gene023431:CDS |
ACTGATGACTCTGAAATGGA+TGG | 0.615606 | 4.1:-15341023 | MS.gene023431:CDS |
CACAGGTTCCGGTAAAAGTG+TGG | 0.622299 | 4.1:-15342241 | MS.gene023431:CDS |
ACTGGAGTCCTCTTGTTCCA+GGG | 0.624385 | 4.1:-15339168 | MS.gene023431:CDS |
GTATTCAAAATGCGCTACCA+CGG | 0.630470 | 4.1:+15338014 | None:intergenic |
TGAATAAACAATAGTTGGGG+AGG | 0.631441 | 4.1:+15337606 | None:intergenic |
AAAGGCAAAGAGCAAGAACA+AGG | 0.634436 | 4.1:-15342405 | MS.gene023431:intron |
ATCCAATCACATCCATTGAG+TGG | 0.634447 | 4.1:-15337984 | MS.gene023431:CDS |
GGAGTCCTCTTGTTCCAGGG+AGG | 0.636093 | 4.1:-15339165 | MS.gene023431:CDS |
TCATGCAGCTTCTGATGGCA+AGG | 0.636729 | 4.1:+15337137 | None:intergenic |
TGACTCTGAAATGGATGGTG+AGG | 0.638725 | 4.1:-15341018 | MS.gene023431:CDS |
GCCAATGAAGAAGCTTCGTG+TGG | 0.638913 | 4.1:+15337958 | None:intergenic |
TGAATAGGAAGGAGATTCCG+TGG | 0.641695 | 4.1:-15338031 | MS.gene023431:intron |
GTGTATCATGCAGCTTCTGA+TGG | 0.643240 | 4.1:+15337132 | None:intergenic |
TGGTGAGGATAGTGATAGCG+AGG | 0.651927 | 4.1:-15341003 | MS.gene023431:CDS |
GTAATGAAATACACTGTGTG+TGG | 0.652047 | 4.1:+15341520 | None:intergenic |
GCCCAAGATGCACATATATG+GGG | 0.653392 | 4.1:+15340772 | None:intergenic |
TTCACACCTACAGTTGCGGA+AGG | 0.659965 | 4.1:-15340842 | MS.gene023431:intron |
AACTAATTGAAGATGACTCG+CGG | 0.660356 | 4.1:-15342443 | None:intergenic |
TTTGTTCTTTACCTAAGACA+AGG | 0.662595 | 4.1:+15342128 | None:intergenic |
TGGTGAATAAACAATAGTTG+GGG | 0.666731 | 4.1:+15337603 | None:intergenic |
AGTGAAGACGAAGAAGAAGG+TGG | 0.675905 | 4.1:-15340975 | MS.gene023431:CDS |
ACGGAGTGAATCATCTTCGG+CGG | 0.677615 | 4.1:-15342273 | MS.gene023431:CDS |
CAATATGGGATACTCGTTTG+GGG | 0.693736 | 4.1:-15338742 | MS.gene023431:CDS |
TATGGGATACTCGTTTGGGG+AGG | 0.701784 | 4.1:-15338739 | MS.gene023431:CDS |
CTAGCAGAGACAGAAACCGA+AGG | 0.726742 | 4.1:-15339262 | MS.gene023431:CDS |
TTGCGGAAGGTAACTCACGA+AGG | 0.747550 | 4.1:-15340829 | MS.gene023431:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTAAATATATCTAATCA+AGG | + | chr4.1:15342271-15342290 | None:intergenic | 10.0% |
!! | AATAACAAAAACAAAATAGT+CGG | + | chr4.1:15341489-15341508 | None:intergenic | 15.0% |
!! | AATATTATCTATACTAATGT+TGG | + | chr4.1:15339799-15339818 | None:intergenic | 15.0% |
!! | ATTTCAAAGATTAACTTATA+AGG | + | chr4.1:15339699-15339718 | None:intergenic | 15.0% |
!!! | AAGTTCATTATTTTTTGAAT+AGG | - | chr4.1:15341522-15341541 | MS.gene023431:CDS | 15.0% |
!!! | ATAAGTTAATCTTTGAAATA+TGG | - | chr4.1:15339700-15339719 | MS.gene023431:intron | 15.0% |
!!! | TCATGATTTATTTTTTGTTT+GGG | - | chr4.1:15337968-15337987 | MS.gene023431:CDS | 15.0% |
!!! | TTTTGAAAAAATTGAAGAAA+CGG | - | chr4.1:15337276-15337295 | MS.gene023431:intron | 15.0% |
!! | AAGTAAAAATTCATATGAAG+AGG | + | chr4.1:15338648-15338667 | None:intergenic | 20.0% |
!! | AATCCAAAGTAAGAAAAATA+AGG | + | chr4.1:15341822-15341841 | None:intergenic | 20.0% |
!! | AGTAAAAATTCATATGAAGA+GGG | + | chr4.1:15338647-15338666 | None:intergenic | 20.0% |
!! | ATAAATCCCTGAAATTTATT+AGG | + | chr4.1:15341719-15341738 | None:intergenic | 20.0% |
!! | CAATAATAGTATTTATCTGT+GGG | - | chr4.1:15340546-15340565 | MS.gene023431:intron | 20.0% |
!! | GATCATATTTAGTTATTGAT+TGG | - | chr4.1:15338928-15338947 | MS.gene023431:intron | 20.0% |
!! | TAATGATGTAATATGCTATT+AGG | + | chr4.1:15341275-15341294 | None:intergenic | 20.0% |
!! | TATAGTACTAAACAAACTAT+GGG | + | chr4.1:15339726-15339745 | None:intergenic | 20.0% |
!! | TGTGAAACATATGTATAAAA+TGG | - | chr4.1:15339663-15339682 | MS.gene023431:intron | 20.0% |
!! | TTATAGTACTAAACAAACTA+TGG | + | chr4.1:15339727-15339746 | None:intergenic | 20.0% |
!! | TTGAACAAAAATATACAACT+CGG | + | chr4.1:15340229-15340248 | None:intergenic | 20.0% |
!!! | AGAAAGTTTACAATTTTGTA+TGG | + | chr4.1:15341113-15341132 | None:intergenic | 20.0% |
!!! | CATGATTTATTTTTTGTTTG+GGG | - | chr4.1:15337969-15337988 | MS.gene023431:CDS | 20.0% |
!!! | GAGTTAATTTTTTTAATCGA+CGG | - | chr4.1:15338906-15338925 | MS.gene023431:intron | 20.0% |
!!! | GCAACATATTGAAATTTTTA+AGG | - | chr4.1:15340102-15340121 | MS.gene023431:intron | 20.0% |
!!! | GTCATGATTTATTTTTTGTT+TGG | - | chr4.1:15337967-15337986 | MS.gene023431:CDS | 20.0% |
!!! | TAGAATTTTTTGTCCTTTAA+TGG | - | chr4.1:15338215-15338234 | MS.gene023431:intron | 20.0% |
!!! | TAGTATAGATAATATTTCTG+CGG | - | chr4.1:15339803-15339822 | MS.gene023431:intron | 20.0% |
!!! | TCATTATTTTTTGAATAGGA+AGG | - | chr4.1:15341526-15341545 | MS.gene023431:CDS | 20.0% |
!!! | TTAAAGTATCCAATATTTCT+GGG | - | chr4.1:15338492-15338511 | MS.gene023431:intron | 20.0% |
!!! | TTAAGGTTCTTAAATTTTAG+CGG | - | chr4.1:15340119-15340138 | MS.gene023431:intron | 20.0% |
!!! | TTTAAAGTATCCAATATTTC+TGG | - | chr4.1:15338491-15338510 | MS.gene023431:intron | 20.0% |
!!! | TTTGTATGGTTTTTCTATAT+GGG | + | chr4.1:15341099-15341118 | None:intergenic | 20.0% |
!!! | TTTTGTATGGTTTTTCTATA+TGG | + | chr4.1:15341100-15341119 | None:intergenic | 20.0% |
! | AAAACTCAAAAGTCCATTAA+AGG | + | chr4.1:15338231-15338250 | None:intergenic | 25.0% |
! | AAATCTTCTTGGAATTCTAT+TGG | - | chr4.1:15338464-15338483 | MS.gene023431:intron | 25.0% |
! | AAATTTAAGCACAAAGATGA+AGG | - | chr4.1:15340366-15340385 | MS.gene023431:intron | 25.0% |
! | AAGAATTATGACATTGTGAT+TGG | - | chr4.1:15337768-15337787 | MS.gene023431:intron | 25.0% |
! | AATCATTCAACTGTTAATGT+GGG | + | chr4.1:15339398-15339417 | None:intergenic | 25.0% |
! | AATCTTCTTGGAATTCTATT+GGG | - | chr4.1:15338465-15338484 | MS.gene023431:intron | 25.0% |
! | AATGAAATACAACAGATATG+AGG | + | chr4.1:15340967-15340986 | None:intergenic | 25.0% |
! | ACGAATTCCTAATAAATTTC+AGG | - | chr4.1:15341709-15341728 | MS.gene023431:intron | 25.0% |
! | ATAATTCAATGTAGTCACTT+GGG | - | chr4.1:15337661-15337680 | MS.gene023431:CDS | 25.0% |
! | CATATTTCATACTATGTTAG+TGG | - | chr4.1:15338992-15339011 | MS.gene023431:CDS | 25.0% |
! | CGAATTCCTAATAAATTTCA+GGG | - | chr4.1:15341710-15341729 | MS.gene023431:intron | 25.0% |
! | CGTAATAAATTTGTAGATCT+GGG | - | chr4.1:15340260-15340279 | MS.gene023431:intron | 25.0% |
! | GCAATAATAGTATTTATCTG+TGG | - | chr4.1:15340545-15340564 | MS.gene023431:intron | 25.0% |
! | GTTTCTCTCATATTATCTTT+GGG | - | chr4.1:15341742-15341761 | MS.gene023431:intron | 25.0% |
! | TAAATTTAGCTACATGATTG+TGG | - | chr4.1:15339584-15339603 | MS.gene023431:intron | 25.0% |
! | TAACAGCAAAATTACTGTAT+AGG | - | chr4.1:15341140-15341159 | MS.gene023431:intron | 25.0% |
! | TAATATGCTATTAGGACATA+AGG | + | chr4.1:15341267-15341286 | None:intergenic | 25.0% |
! | TAGAATGTATAAGATTGAAG+TGG | - | chr4.1:15339555-15339574 | MS.gene023431:intron | 25.0% |
! | TCAAAATGACAAAATATGTG+TGG | + | chr4.1:15339511-15339530 | None:intergenic | 25.0% |
! | TCAACTTACGTAAGTAAATA+CGG | - | chr4.1:15341651-15341670 | MS.gene023431:intron | 25.0% |
! | TCATTGTCAAAGTAGATATA+AGG | - | chr4.1:15340490-15340509 | MS.gene023431:intron | 25.0% |
! | TGTTTCTCTCATATTATCTT+TGG | - | chr4.1:15341741-15341760 | MS.gene023431:intron | 25.0% |
! | TTATCTATACTAATGTTGGT+AGG | + | chr4.1:15339795-15339814 | None:intergenic | 25.0% |
!! | AGCTTTTGTATAATGAAAGA+AGG | + | chr4.1:15342210-15342229 | None:intergenic | 25.0% |
!! | ATTGAAAAAACTCCTTTTAC+TGG | - | chr4.1:15340595-15340614 | MS.gene023431:intron | 25.0% |
!! | TCTTGTGTGTTTTCTTTTAT+AGG | - | chr4.1:15338097-15338116 | MS.gene023431:intron | 25.0% |
!! | TTAAACTATGAGCAACTTTT+TGG | + | chr4.1:15338959-15338978 | None:intergenic | 25.0% |
!! | TTCAAGTTAAAGGAAATAAG+AGG | + | chr4.1:15342298-15342317 | None:intergenic | 25.0% |
!! | TTGTGCTTAAATTTTTGTAG+TGG | + | chr4.1:15340360-15340379 | None:intergenic | 25.0% |
!!! | AATAAAACCCATTATTTTGC+TGG | - | chr4.1:15337495-15337514 | MS.gene023431:intron | 25.0% |
!!! | ATTCTGCTTTTTATTTTCTG+TGG | - | chr4.1:15337232-15337251 | MS.gene023431:CDS | 25.0% |
!!! | ATTTCCTTTAACTTGAAACA+GGG | - | chr4.1:15342301-15342320 | MS.gene023431:intron | 25.0% |
!!! | GGACTTTATTGTTTTTGTTA+TGG | - | chr4.1:15339609-15339628 | MS.gene023431:intron | 25.0% |
!!! | TATTTCCTTTAACTTGAAAC+AGG | - | chr4.1:15342300-15342319 | MS.gene023431:intron | 25.0% |
!!! | TTCTGCTTTTTATTTTCTGT+GGG | - | chr4.1:15337233-15337252 | MS.gene023431:CDS | 25.0% |
!!! | TTGAACCAAGTTATTTCTAT+TGG | - | chr4.1:15339141-15339160 | MS.gene023431:intron | 25.0% |
!!! | TTTTTCTTGTTTCAATGTTG+TGG | - | chr4.1:15339174-15339193 | MS.gene023431:CDS | 25.0% |
AAAATAAGCCCAATGATTAC+CGG | + | chr4.1:15340436-15340455 | None:intergenic | 30.0% | |
AAAGCTAGTAAAACATGACT+AGG | + | chr4.1:15338377-15338396 | None:intergenic | 30.0% | |
AACAAAAACAAAATAGTCGG+CGG | + | chr4.1:15341486-15341505 | None:intergenic | 30.0% | |
AACCTAGCTTATACTCAAAT+AGG | + | chr4.1:15342138-15342157 | None:intergenic | 30.0% | |
AATAAAGTGCGAGATCAAAA+GGG | + | chr4.1:15337215-15337234 | None:intergenic | 30.0% | |
ACACAGTGTATTTCATTACA+GGG | - | chr4.1:15338052-15338071 | MS.gene023431:intron | 30.0% | |
ACTTCTTTGATAGAAAGAGA+TGG | + | chr4.1:15340186-15340205 | None:intergenic | 30.0% | |
AGGATAAATTATTCTGTTCC+AGG | - | chr4.1:15339892-15339911 | MS.gene023431:intron | 30.0% | |
ATCATTCAACTGTTAATGTG+GGG | + | chr4.1:15339397-15339416 | None:intergenic | 30.0% | |
ATGTTGATCTTCATGTTTGT+AGG | - | chr4.1:15340517-15340536 | MS.gene023431:intron | 30.0% | |
ATGTTGCAATTGCAATACTT+AGG | + | chr4.1:15339957-15339976 | None:intergenic | 30.0% | |
CAATCATTCAACTGTTAATG+TGG | + | chr4.1:15339399-15339418 | None:intergenic | 30.0% | |
CATAATTCAATGTAGTCACT+TGG | - | chr4.1:15337660-15337679 | MS.gene023431:CDS | 30.0% | |
CTGATCCAATAGAAATAACT+TGG | + | chr4.1:15339149-15339168 | None:intergenic | 30.0% | |
CTGGTGAATAAACAATAGTT+GGG | + | chr4.1:15341969-15341988 | None:intergenic | 30.0% | |
CTTAGTAGAACATTGTCAAA+GGG | + | chr4.1:15339351-15339370 | None:intergenic | 30.0% | |
GATAACTCCAGCAAAATAAT+GGG | + | chr4.1:15337505-15337524 | None:intergenic | 30.0% | |
GATGCTTTAATTGTCTTATC+TGG | - | chr4.1:15341218-15341237 | MS.gene023431:intron | 30.0% | |
GCGTAATAAATTTGTAGATC+TGG | - | chr4.1:15340259-15340278 | MS.gene023431:intron | 30.0% | |
GCTTTAACCAAACATTTACT+TGG | + | chr4.1:15338873-15338892 | None:intergenic | 30.0% | |
GTAAGAAAAATAAGGCAGTT+TGG | + | chr4.1:15341814-15341833 | None:intergenic | 30.0% | |
GTAGTAAATGAGCCATTATT+TGG | - | chr4.1:15339016-15339035 | MS.gene023431:CDS | 30.0% | |
TAGAATGAAAATTGAGTCGA+TGG | + | chr4.1:15340939-15340958 | None:intergenic | 30.0% | |
TCCTTCAAAAATGCATTTCT+GGG | + | chr4.1:15341384-15341403 | None:intergenic | 30.0% | |
TCTTAGTAGAACATTGTCAA+AGG | + | chr4.1:15339352-15339371 | None:intergenic | 30.0% | |
TGATAACTCCAGCAAAATAA+TGG | + | chr4.1:15337506-15337525 | None:intergenic | 30.0% | |
TGGTGAATAAACAATAGTTG+GGG | + | chr4.1:15341968-15341987 | None:intergenic | 30.0% | |
TGTATTTCATTGTACTGAGT+AGG | - | chr4.1:15340976-15340995 | MS.gene023431:CDS | 30.0% | |
TGTCATAATTCTTGTGAAAG+AGG | + | chr4.1:15337761-15337780 | None:intergenic | 30.0% | |
TGTTGATCTTCATGTTTGTA+GGG | - | chr4.1:15340518-15340537 | MS.gene023431:intron | 30.0% | |
TTCCTTCAAAAATGCATTTC+TGG | + | chr4.1:15341385-15341404 | None:intergenic | 30.0% | |
TTTCACAATTAATGTCTGCA+TGG | + | chr4.1:15339650-15339669 | None:intergenic | 30.0% | |
TTTGTTCTTTACCTAAGACA+AGG | + | chr4.1:15337443-15337462 | None:intergenic | 30.0% | |
! | AAGGTGCTTTGAATATTTGA+AGG | + | chr4.1:15342415-15342434 | None:intergenic | 30.0% |
! | AGGAACTTTTTATCGGAAAA+TGG | + | chr4.1:15341247-15341266 | None:intergenic | 30.0% |
! | AGTTGATCTTACTGACATTT+TGG | - | chr4.1:15338698-15338717 | MS.gene023431:CDS | 30.0% |
! | GGACATAAGGAACTTTTTAT+CGG | + | chr4.1:15341254-15341273 | None:intergenic | 30.0% |
! | TATTGCAATGCTTTTATCCA+CGG | + | chr4.1:15340811-15340830 | None:intergenic | 30.0% |
! | TGACATAGAATTGGTAACAT+TGG | + | chr4.1:15337794-15337813 | None:intergenic | 30.0% |
! | TTTGAATATTTGAAGGCATG+AGG | + | chr4.1:15342408-15342427 | None:intergenic | 30.0% |
!! | AGTATCTCGTTTGATTTGAT+AGG | - | chr4.1:15339872-15339891 | MS.gene023431:intron | 30.0% |
!! | AGTTATTTCTATTGGATCAG+AGG | - | chr4.1:15339149-15339168 | MS.gene023431:intron | 30.0% |
!! | GGATAAAAGCATTGCAATAT+GGG | - | chr4.1:15340812-15340831 | MS.gene023431:CDS | 30.0% |
!! | GTTATTTCTATTGGATCAGA+GGG | - | chr4.1:15339150-15339169 | MS.gene023431:intron | 30.0% |
!! | TGGATAAAAGCATTGCAATA+TGG | - | chr4.1:15340811-15340830 | MS.gene023431:CDS | 30.0% |
!! | TTACGTAAGTTGATTATCAG+CGG | + | chr4.1:15341644-15341663 | None:intergenic | 30.0% |
!!! | CTGCCTTATTTTTCTTACTT+TGG | - | chr4.1:15341816-15341835 | MS.gene023431:intron | 30.0% |
!!! | GAATGTTGTTATTTTGCCAT+GGG | - | chr4.1:15339292-15339311 | MS.gene023431:CDS | 30.0% |
!!! | TAGTTTTAAAACCCTATGAC+TGG | - | chr4.1:15338840-15338859 | MS.gene023431:intron | 30.0% |
!!! | TGAATGTTGTTATTTTGCCA+TGG | - | chr4.1:15339291-15339310 | MS.gene023431:CDS | 30.0% |
AAAGTGAGTATTTGAGAGCT+TGG | - | chr4.1:15339432-15339451 | MS.gene023431:intron | 35.0% | |
AAGCAAACGCACAAAAATTG+TGG | + | chr4.1:15337915-15337934 | None:intergenic | 35.0% | |
AATCCTTTGCCACAGAATAT+GGG | - | chr4.1:15341856-15341875 | MS.gene023431:intron | 35.0% | |
ACACTGAAATGTTCCGAAAA+AGG | + | chr4.1:15340674-15340693 | None:intergenic | 35.0% | |
ACCAAACATTTACTTGGCTA+AGG | + | chr4.1:15338867-15338886 | None:intergenic | 35.0% | |
ACTGTTCATTACCGATCAAA+TGG | - | chr4.1:15338149-15338168 | MS.gene023431:intron | 35.0% | |
AGCCTATTTGAGTATAAGCT+AGG | - | chr4.1:15342133-15342152 | MS.gene023431:intron | 35.0% | |
ATAGCTCAAAGGATTCACAA+TGG | - | chr4.1:15339201-15339220 | MS.gene023431:CDS | 35.0% | |
CAAAAACATGAGGTTCTGTA+GGG | + | chr4.1:15340779-15340798 | None:intergenic | 35.0% | |
CACACAGTGTATTTCATTAC+AGG | - | chr4.1:15338051-15338070 | MS.gene023431:intron | 35.0% | |
CATGCAACATATTATCAACG+AGG | + | chr4.1:15338430-15338449 | None:intergenic | 35.0% | |
CCAACTATTGTTTATTCACC+AGG | - | chr4.1:15341967-15341986 | MS.gene023431:intron | 35.0% | |
CCTGGTGAATAAACAATAGT+TGG | + | chr4.1:15341970-15341989 | None:intergenic | 35.0% | |
CTAATCAAGGAGTTCTATCA+TGG | + | chr4.1:15342258-15342277 | None:intergenic | 35.0% | |
CTGATGTGAATGTATTGTCA+TGG | - | chr4.1:15340883-15340902 | MS.gene023431:intron | 35.0% | |
CTGGAGTTATCACTGTTAAA+TGG | - | chr4.1:15337514-15337533 | MS.gene023431:intron | 35.0% | |
CTGTTCATTACCGATCAAAT+GGG | - | chr4.1:15338150-15338169 | MS.gene023431:intron | 35.0% | |
CTTGGGTAATGACAAAATCT+GGG | + | chr4.1:15339325-15339344 | None:intergenic | 35.0% | |
GAATAAAGTGCGAGATCAAA+AGG | + | chr4.1:15337216-15337235 | None:intergenic | 35.0% | |
GATACGACAGAAAAGTTGAA+GGG | + | chr4.1:15339044-15339063 | None:intergenic | 35.0% | |
GCAAAGTGATTCAAATTACC+TGG | + | chr4.1:15341988-15342007 | None:intergenic | 35.0% | |
GTAATGAAATACACTGTGTG+TGG | + | chr4.1:15338051-15338070 | None:intergenic | 35.0% | |
GTTGATCTTCATGTTTGTAG+GGG | - | chr4.1:15340519-15340538 | MS.gene023431:intron | 35.0% | |
TAATCCTTTGCCACAGAATA+TGG | - | chr4.1:15341855-15341874 | MS.gene023431:intron | 35.0% | |
TAGCTCAAAGGATTCACAAT+GGG | - | chr4.1:15339202-15339221 | MS.gene023431:CDS | 35.0% | |
TATTTGCAGAGTCCATGAAA+GGG | + | chr4.1:15341773-15341792 | None:intergenic | 35.0% | |
TCATAGCTCTTGAATTGCAA+TGG | + | chr4.1:15337582-15337601 | None:intergenic | 35.0% | |
TCATTCAACTGTTAATGTGG+GGG | + | chr4.1:15339396-15339415 | None:intergenic | 35.0% | |
TCCTTAGCCAAGTAAATGTT+TGG | - | chr4.1:15338863-15338882 | MS.gene023431:intron | 35.0% | |
TCTTTCCTACATGCTATTAG+TGG | - | chr4.1:15339067-15339086 | MS.gene023431:intron | 35.0% | |
TGAATAAACAATAGTTGGGG+AGG | + | chr4.1:15341965-15341984 | None:intergenic | 35.0% | |
TGAATGTATTGTCATGGAAC+AGG | - | chr4.1:15340889-15340908 | MS.gene023431:intron | 35.0% | |
TGATACGACAGAAAAGTTGA+AGG | + | chr4.1:15339045-15339064 | None:intergenic | 35.0% | |
TGTCTCATGAATCATCTTGA+AGG | - | chr4.1:15338121-15338140 | MS.gene023431:intron | 35.0% | |
TGTTCATTACCGATCAAATG+GGG | - | chr4.1:15338151-15338170 | MS.gene023431:intron | 35.0% | |
TTATTTGCAGAGTCCATGAA+AGG | + | chr4.1:15341774-15341793 | None:intergenic | 35.0% | |
TTTAGCTACATGATTGTGGT+TGG | - | chr4.1:15339588-15339607 | MS.gene023431:intron | 35.0% | |
TTTCATTGTACTGAGTAGGT+TGG | - | chr4.1:15340980-15340999 | MS.gene023431:CDS | 35.0% | |
! | ACCCAGAAATGCATTTTTGA+AGG | - | chr4.1:15341380-15341399 | MS.gene023431:intron | 35.0% |
! | ATTGGTGACATTGGTAACAT+TGG | - | chr4.1:15337704-15337723 | MS.gene023431:intron | 35.0% |
! | CAGGTATAATTTTTGCCCTT+GGG | - | chr4.1:15339911-15339930 | MS.gene023431:intron | 35.0% |
! | GATATTTTACGTGACACCAT+GGG | - | chr4.1:15338006-15338025 | MS.gene023431:CDS | 35.0% |
! | GGTTTTTCTATATGGGCAAA+GGG | + | chr4.1:15341092-15341111 | None:intergenic | 35.0% |
! | GTTTTTCTATATGGGCAAAG+GGG | + | chr4.1:15341091-15341110 | None:intergenic | 35.0% |
! | TCCATGCTTTTCATATTGGA+TGG | - | chr4.1:15337417-15337436 | MS.gene023431:intron | 35.0% |
! | TCTAATGAGTTGAAGTTTGC+TGG | - | chr4.1:15339532-15339551 | MS.gene023431:intron | 35.0% |
! | TCTCTCCATGCTTTTCATAT+TGG | - | chr4.1:15337413-15337432 | MS.gene023431:intron | 35.0% |
! | TGAAACTGATGACTCTGAAA+TGG | - | chr4.1:15338541-15338560 | MS.gene023431:CDS | 35.0% |
! | TGACATAGAATTGGTGACAT+TGG | - | chr4.1:15337695-15337714 | MS.gene023431:CDS | 35.0% |
! | TGGTTTTTCTATATGGGCAA+AGG | + | chr4.1:15341093-15341112 | None:intergenic | 35.0% |
!! | ATACTAGCTCTGAACTTTGT+CGG | + | chr4.1:15339857-15339876 | None:intergenic | 35.0% |
!! | GGTAACGGAAAAGTTGATAT+TGG | - | chr4.1:15338172-15338191 | MS.gene023431:intron | 35.0% |
!! | TTAAATTTTAGCGGCAGCTA+AGG | - | chr4.1:15340128-15340147 | MS.gene023431:intron | 35.0% |
!! | TTGTCCCTGTTTCAAGTTAA+AGG | + | chr4.1:15342308-15342327 | None:intergenic | 35.0% |
!!! | AGGTATTCAGCATTGACTTT+TGG | - | chr4.1:15340909-15340928 | MS.gene023431:intron | 35.0% |
!!! | GCAAATTGCACTGATTGTTT+TGG | - | chr4.1:15339266-15339285 | MS.gene023431:CDS | 35.0% |
AAAGGCAAAGAGCAAGAACA+AGG | - | chr4.1:15337163-15337182 | MS.gene023431:CDS | 40.0% | |
AACATTGTCAAAGGGATGCT+TGG | + | chr4.1:15339343-15339362 | None:intergenic | 40.0% | |
AAGAAAGGTCCCATATTCTG+TGG | + | chr4.1:15341868-15341887 | None:intergenic | 40.0% | |
AAGGAACTTCTAGATGCACT+TGG | - | chr4.1:15341399-15341418 | MS.gene023431:intron | 40.0% | |
ACATTGTCAAAGGGATGCTT+GGG | + | chr4.1:15339342-15339361 | None:intergenic | 40.0% | |
ACGTCTCTTCCCAGAAATAT+TGG | + | chr4.1:15338504-15338523 | None:intergenic | 40.0% | |
AGAGCTTGGAATTGTAACTG+AGG | - | chr4.1:15339446-15339465 | MS.gene023431:intron | 40.0% | |
AGGATTCACAATGGGAATAG+AGG | - | chr4.1:15339210-15339229 | MS.gene023431:CDS | 40.0% | |
AGTAACCTCATTTGTACCCA+AGG | + | chr4.1:15339930-15339949 | None:intergenic | 40.0% | |
ATACCGACACTTCTGATTGA+AGG | + | chr4.1:15337867-15337886 | None:intergenic | 40.0% | |
ATAGTATGTACTGCAGCAGA+TGG | - | chr4.1:15342373-15342392 | MS.gene023431:intron | 40.0% | |
ATCCAATCACATCCATTGAG+TGG | - | chr4.1:15341584-15341603 | MS.gene023431:intron | 40.0% | |
ATCCCCATATATGTGCATCT+TGG | - | chr4.1:15338794-15338813 | MS.gene023431:CDS | 40.0% | |
ATGAAGGCTATGCTATAGAC+TGG | - | chr4.1:15340382-15340401 | MS.gene023431:intron | 40.0% | |
CAATATGGGATACTCGTTTG+GGG | - | chr4.1:15340826-15340845 | MS.gene023431:CDS | 40.0% | |
CAGAATATGGGACCTTTCTT+TGG | - | chr4.1:15341868-15341887 | MS.gene023431:intron | 40.0% | |
CCAAGGGCAAAAATTATACC+TGG | + | chr4.1:15339913-15339932 | None:intergenic | 40.0% | |
CGGCATAAAACATCGTCAAA+AGG | - | chr4.1:15337145-15337164 | MS.gene023431:CDS | 40.0% | |
CTCACGAAGGTTGTATTAAC+CGG | - | chr4.1:15338752-15338771 | MS.gene023431:CDS | 40.0% | |
CTGTCAGTATGTCCAGTAAA+AGG | + | chr4.1:15340610-15340629 | None:intergenic | 40.0% | |
GAAACGGAGTGAATCATCTT+CGG | - | chr4.1:15337292-15337311 | MS.gene023431:intron | 40.0% | |
GAATTCGTCCAACAATTCTG+TGG | + | chr4.1:15341697-15341716 | None:intergenic | 40.0% | |
GACATGAGCTCTCATCTTAA+TGG | - | chr4.1:15340282-15340301 | MS.gene023431:intron | 40.0% | |
GAGCAAGAAGCAAAAACATG+AGG | + | chr4.1:15340789-15340808 | None:intergenic | 40.0% | |
GAGTCATCAGTTTCACGTTT+AGG | + | chr4.1:15338536-15338555 | None:intergenic | 40.0% | |
GATAGTGAAGACGAAGAAGA+AGG | - | chr4.1:15338590-15338609 | MS.gene023431:intron | 40.0% | |
GCAAAAACATGAGGTTCTGT+AGG | + | chr4.1:15340780-15340799 | None:intergenic | 40.0% | |
GCAATATGGGATACTCGTTT+GGG | - | chr4.1:15340825-15340844 | MS.gene023431:CDS | 40.0% | |
GCACTTGAGTGACATAGAAT+TGG | + | chr4.1:15337803-15337822 | None:intergenic | 40.0% | |
GCAGTACATACTATCATTCC+AGG | + | chr4.1:15342367-15342386 | None:intergenic | 40.0% | |
GCCATCCAATATGAAAAGCA+TGG | + | chr4.1:15337421-15337440 | None:intergenic | 40.0% | |
GCTCAACAATGAGTACGTTT+GGG | - | chr4.1:15342006-15342025 | MS.gene023431:intron | 40.0% | |
GCTTGGGTAATGACAAAATC+TGG | + | chr4.1:15339326-15339345 | None:intergenic | 40.0% | |
GCTTGTATCCGGTAATCATT+GGG | - | chr4.1:15340425-15340444 | MS.gene023431:intron | 40.0% | |
GGATTCACAATGGGAATAGA+GGG | - | chr4.1:15339211-15339230 | MS.gene023431:CDS | 40.0% | |
GTAACCTCATTTGTACCCAA+GGG | + | chr4.1:15339929-15339948 | None:intergenic | 40.0% | |
GTATTCAAAATGCGCTACCA+CGG | + | chr4.1:15341557-15341576 | None:intergenic | 40.0% | |
GTATTTCATTACAGGGACAC+AGG | - | chr4.1:15338059-15338078 | MS.gene023431:intron | 40.0% | |
TACACCATCCACAGAATTGT+TGG | - | chr4.1:15341686-15341705 | MS.gene023431:intron | 40.0% | |
TCAACTTCAACACAGTCAAG+AGG | + | chr4.1:15338684-15338703 | None:intergenic | 40.0% | |
TCAGACTGCTTAAGGTATGT+TGG | - | chr4.1:15341057-15341076 | MS.gene023431:CDS | 40.0% | |
TCCCCATATATGTGCATCTT+GGG | - | chr4.1:15338795-15338814 | MS.gene023431:CDS | 40.0% | |
TGCAATATGGGATACTCGTT+TGG | - | chr4.1:15340824-15340843 | MS.gene023431:CDS | 40.0% | |
TGCCCAAGATGCACATATAT+GGG | + | chr4.1:15338800-15338819 | None:intergenic | 40.0% | |
TGCTCAACAATGAGTACGTT+TGG | - | chr4.1:15342005-15342024 | MS.gene023431:intron | 40.0% | |
TGGAGAGAATTGTAAGCAGA+AGG | + | chr4.1:15337401-15337420 | None:intergenic | 40.0% | |
TGGATGTGATTGGATGCTTA+TGG | + | chr4.1:15341579-15341598 | None:intergenic | 40.0% | |
TTACCGATCAAATGGGGTAA+CGG | - | chr4.1:15338157-15338176 | MS.gene023431:intron | 40.0% | |
TTCTGTTCGAACTAAACCCA+TGG | + | chr4.1:15338025-15338044 | None:intergenic | 40.0% | |
TTGTAACTGAGGACTCGATT+TGG | - | chr4.1:15339457-15339476 | MS.gene023431:intron | 40.0% | |
TTTCCGTTACCCCATTTGAT+CGG | + | chr4.1:15338163-15338182 | None:intergenic | 40.0% | |
! | ACACCTTCAATCAGAAGTGT+CGG | - | chr4.1:15337861-15337880 | MS.gene023431:intron | 40.0% |
! | ATGGGACCTTTCTTTGGAAA+AGG | - | chr4.1:15341874-15341893 | MS.gene023431:intron | 40.0% |
! | CCAGGTATAATTTTTGCCCT+TGG | - | chr4.1:15339910-15339929 | MS.gene023431:intron | 40.0% |
! | CGATATTTTACGTGACACCA+TGG | - | chr4.1:15338005-15338024 | MS.gene023431:CDS | 40.0% |
! | GTCGGTATTTAGAGTTCAAG+AGG | - | chr4.1:15337879-15337898 | MS.gene023431:intron | 40.0% |
! | TAGGTTGGCTAGTTGTATGT+TGG | - | chr4.1:15340995-15341014 | MS.gene023431:CDS | 40.0% |
! | TATATGGGGATTTTGTGCCA+TGG | + | chr4.1:15338785-15338804 | None:intergenic | 40.0% |
!! | ACTGATGACTCTGAAATGGA+TGG | - | chr4.1:15338545-15338564 | MS.gene023431:CDS | 40.0% |
!! | AGGAGCGTTTACTTGTTCTT+GGG | + | chr4.1:15341933-15341952 | None:intergenic | 40.0% |
!! | AGTTGAAGGGTGCCAAATAA+TGG | + | chr4.1:15339031-15339050 | None:intergenic | 40.0% |
!! | ATATTGGATGGCCTTGTCTT+AGG | - | chr4.1:15337429-15337448 | MS.gene023431:intron | 40.0% |
!! | CTTTGGGTTTTACCCTTTCA+TGG | - | chr4.1:15341758-15341777 | MS.gene023431:intron | 40.0% |
!! | GTTCCGAAAAAGGTATTGCT+TGG | + | chr4.1:15340664-15340683 | None:intergenic | 40.0% |
AAGACCCCAAAGAACTGCAT+TGG | - | chr4.1:15342329-15342348 | MS.gene023431:intron | 45.0% | |
AGTGAAGACGAAGAAGAAGG+TGG | - | chr4.1:15338593-15338612 | MS.gene023431:intron | 45.0% | |
ATCAACTCCTTGGACACCTT+CGG | + | chr4.1:15340325-15340344 | None:intergenic | 45.0% | |
CAAGAAGATTTCTCAGCCTG+GGG | + | chr4.1:15338455-15338474 | None:intergenic | 45.0% | |
CACTAGCAGATAGCATCACA+AGG | + | chr4.1:15338291-15338310 | None:intergenic | 45.0% | |
CCAAGAAGATTTCTCAGCCT+GGG | + | chr4.1:15338456-15338475 | None:intergenic | 45.0% | |
CTCCACTCAATGGATGTGAT+TGG | + | chr4.1:15341589-15341608 | None:intergenic | 45.0% | |
CTGCCCAAGATGCACATATA+TGG | + | chr4.1:15338801-15338820 | None:intergenic | 45.0% | |
GCACTTGGGTGACATAGAAT+TGG | - | chr4.1:15337686-15337705 | MS.gene023431:CDS | 45.0% | |
GCCCAAGATGCACATATATG+GGG | + | chr4.1:15338799-15338818 | None:intergenic | 45.0% | |
GGCTTGTATCCGGTAATCAT+TGG | - | chr4.1:15340424-15340443 | MS.gene023431:intron | 45.0% | |
GTGTGCCAATGCAGTTCTTT+GGG | + | chr4.1:15342337-15342356 | None:intergenic | 45.0% | |
GTTGTGGCTGAATAGCTCAA+AGG | - | chr4.1:15339190-15339209 | MS.gene023431:CDS | 45.0% | |
TAATATGTTGCATGTGCCCC+AGG | - | chr4.1:15338436-15338455 | MS.gene023431:intron | 45.0% | |
TACACCGACACAAGTGACTA+CGG | + | chr4.1:15337829-15337848 | None:intergenic | 45.0% | |
TAGTCACTTGGGTAGCACTT+GGG | - | chr4.1:15337672-15337691 | MS.gene023431:CDS | 45.0% | |
TATTAACCGGATACGCTCCA+TGG | - | chr4.1:15338765-15338784 | MS.gene023431:CDS | 45.0% | |
TATTATCTCCCGACCTGTTG+TGG | + | chr4.1:15339831-15339850 | None:intergenic | 45.0% | |
TCCAAGAAGATTTCTCAGCC+TGG | + | chr4.1:15338457-15338476 | None:intergenic | 45.0% | |
TCCACACGAAGCTTCTTCAT+TGG | - | chr4.1:15341609-15341628 | MS.gene023431:intron | 45.0% | |
TCGAGCCACTAATAGCATGT+AGG | + | chr4.1:15339075-15339094 | None:intergenic | 45.0% | |
TCGTCCAACAATTCTGTGGA+TGG | + | chr4.1:15341693-15341712 | None:intergenic | 45.0% | |
TCGTGATCTCAGACTGCTTA+AGG | - | chr4.1:15341049-15341068 | MS.gene023431:CDS | 45.0% | |
TCTGTTCACACCTACAGTTG+CGG | - | chr4.1:15338722-15338741 | MS.gene023431:CDS | 45.0% | |
TCTTCCAACTTATCCACACC+AGG | + | chr4.1:15337356-15337375 | None:intergenic | 45.0% | |
TGAATAGGAAGGAGATTCCG+TGG | - | chr4.1:15341537-15341556 | MS.gene023431:CDS | 45.0% | |
TGTGCCAATGCAGTTCTTTG+GGG | + | chr4.1:15342336-15342355 | None:intergenic | 45.0% | |
TGTGTGCCAATGCAGTTCTT+TGG | + | chr4.1:15342338-15342357 | None:intergenic | 45.0% | |
TGTTCAATGAACCCTTGCAG+TGG | - | chr4.1:15340751-15340770 | MS.gene023431:intron | 45.0% | |
TTCCATGTTGCAGCAGATGT+AGG | + | chr4.1:15340574-15340593 | None:intergenic | 45.0% | |
TTGGCTAAGGACCAGTCATA+GGG | + | chr4.1:15338854-15338873 | None:intergenic | 45.0% | |
TTTGCCCTTGGGTACAAATG+AGG | - | chr4.1:15339922-15339941 | MS.gene023431:intron | 45.0% | |
TTTGGAAAAGGACGAGGAAG+AGG | - | chr4.1:15341886-15341905 | MS.gene023431:intron | 45.0% | |
! | CCGCCAAGCAATACCTTTTT+CGG | - | chr4.1:15340658-15340677 | MS.gene023431:intron | 45.0% |
! | CCTCGTCCTTTTCCAAAGAA+AGG | + | chr4.1:15341883-15341902 | None:intergenic | 45.0% |
! | CCTTTCTTTGGAAAAGGACG+AGG | - | chr4.1:15341880-15341899 | MS.gene023431:intron | 45.0% |
! | TATTTCTGCGGTTCCACAAC+AGG | - | chr4.1:15339815-15339834 | MS.gene023431:intron | 45.0% |
! | TGTTGGTAGGTTCACAAGTC+AGG | + | chr4.1:15339782-15339801 | None:intergenic | 45.0% |
!! | CAGGAGCGTTTACTTGTTCT+TGG | + | chr4.1:15341934-15341953 | None:intergenic | 45.0% |
!! | CCGAAAAAGGTATTGCTTGG+CGG | + | chr4.1:15340661-15340680 | None:intergenic | 45.0% |
!! | TGACTCTGAAATGGATGGTG+AGG | - | chr4.1:15338550-15338569 | MS.gene023431:CDS | 45.0% |
!! | TGCGTCTTTTCAAGCACACA+AGG | - | chr4.1:15340860-15340879 | MS.gene023431:intron | 45.0% |
!! | TGTTTTTGCTTCTTGCTCCG+TGG | - | chr4.1:15340791-15340810 | MS.gene023431:CDS | 45.0% |
ACACCGACACAAGTGACTAC+GGG | + | chr4.1:15337828-15337847 | None:intergenic | 50.0% | |
ACGGAGTGAATCATCTTCGG+CGG | - | chr4.1:15337295-15337314 | MS.gene023431:intron | 50.0% | |
ACTGGAGTCCTCTTGTTCCA+GGG | - | chr4.1:15340400-15340419 | MS.gene023431:intron | 50.0% | |
AGCCTACATCTGCTGCAACA+TGG | - | chr4.1:15340569-15340588 | MS.gene023431:intron | 50.0% | |
AGCGGCAGCTAAGGTTGTTA+AGG | - | chr4.1:15340137-15340156 | MS.gene023431:intron | 50.0% | |
AGGTTCACAAGTCAGGTCGT+GGG | + | chr4.1:15339775-15339794 | None:intergenic | 50.0% | |
CACAGGTTCCGGTAAAAGTG+TGG | - | chr4.1:15337327-15337346 | MS.gene023431:intron | 50.0% | |
CATTGGCACACACAGATTCC+TGG | - | chr4.1:15342346-15342365 | MS.gene023431:intron | 50.0% | |
CCCAGGCTGAGAAATCTTCT+TGG | - | chr4.1:15338453-15338472 | MS.gene023431:intron | 50.0% | |
CCTGAACTGCATCAACTCCT+TGG | + | chr4.1:15340335-15340354 | None:intergenic | 50.0% | |
CTACCCGTAGTCACTTGTGT+CGG | - | chr4.1:15337822-15337841 | MS.gene023431:intron | 50.0% | |
CTAGCAGAGACAGAAACCGA+AGG | - | chr4.1:15340306-15340325 | MS.gene023431:intron | 50.0% | |
CTTGGCTAAGGACCAGTCAT+AGG | + | chr4.1:15338855-15338874 | None:intergenic | 50.0% | |
GAGTTACCTTCCGCAACTGT+AGG | + | chr4.1:15338735-15338754 | None:intergenic | 50.0% | |
GCAACCTGGTGTGGATAAGT+TGG | - | chr4.1:15337349-15337368 | MS.gene023431:intron | 50.0% | |
GCCAATGAAGAAGCTTCGTG+TGG | + | chr4.1:15341613-15341632 | None:intergenic | 50.0% | |
GCCGATCACAATGTCACAAG+CGG | - | chr4.1:15337726-15337745 | MS.gene023431:intron | 50.0% | |
GCCGCTTGTGACATTGTGAT+CGG | + | chr4.1:15337730-15337749 | None:intergenic | 50.0% | |
GCGGCAGCTAAGGTTGTTAA+GGG | - | chr4.1:15340138-15340157 | MS.gene023431:intron | 50.0% | |
GCTAGTTGTATGTTGGCGTC+GGG | - | chr4.1:15341002-15341021 | MS.gene023431:CDS | 50.0% | |
GGTCCCATATTCTGTGGCAA+AGG | + | chr4.1:15341862-15341881 | None:intergenic | 50.0% | |
GTAGTCACTTGGGTAGCACT+TGG | - | chr4.1:15337671-15337690 | MS.gene023431:CDS | 50.0% | |
TACCTGCAAAGTAGGACCAC+CGG | + | chr4.1:15338621-15338640 | None:intergenic | 50.0% | |
TAGGTTCACAAGTCAGGTCG+TGG | + | chr4.1:15339776-15339795 | None:intergenic | 50.0% | |
TATGGGATACTCGTTTGGGG+AGG | - | chr4.1:15340829-15340848 | MS.gene023431:CDS | 50.0% | |
TCATGCAGCTTCTGATGGCA+AGG | + | chr4.1:15342434-15342453 | None:intergenic | 50.0% | |
TGTGCATCTTGGGCAGAATC+TGG | - | chr4.1:15338805-15338824 | MS.gene023431:intron | 50.0% | |
TGTGCTTGAAAAGACGCAGC+TGG | + | chr4.1:15340858-15340877 | None:intergenic | 50.0% | |
TTCACACCTACAGTTGCGGA+AGG | - | chr4.1:15338726-15338745 | MS.gene023431:CDS | 50.0% | |
TTCGTGTGGACTCCACTCAA+TGG | + | chr4.1:15341599-15341618 | None:intergenic | 50.0% | |
TTGCGGAAGGTAACTCACGA+AGG | - | chr4.1:15338739-15338758 | MS.gene023431:CDS | 50.0% | |
TTTGTGCCATGGAGCGTATC+CGG | + | chr4.1:15338774-15338793 | None:intergenic | 50.0% | |
! | AAAAGTGTGGCAACCTGGTG+TGG | - | chr4.1:15337340-15337359 | MS.gene023431:intron | 50.0% |
! | AAATCTGGGACATCAGCCCA+TGG | + | chr4.1:15339311-15339330 | None:intergenic | 50.0% |
! | CACACTTTTACCGGAACCTG+TGG | + | chr4.1:15337329-15337348 | None:intergenic | 50.0% |
! | CCAGGTTGCCACACTTTTAC+CGG | + | chr4.1:15337338-15337357 | None:intergenic | 50.0% |
! | CTTGTGTCGGTGTAGTACAC+TGG | - | chr4.1:15337835-15337854 | MS.gene023431:intron | 50.0% |
! | GGCTAGTTGTATGTTGGCGT+CGG | - | chr4.1:15341001-15341020 | MS.gene023431:CDS | 50.0% |
! | TGGTGAGGATAGTGATAGCG+AGG | - | chr4.1:15338565-15338584 | MS.gene023431:CDS | 50.0% |
!! | ACAGAAACCGAAGGTGTCCA+AGG | - | chr4.1:15340315-15340334 | MS.gene023431:intron | 50.0% |
!! | CCAAGGAGTTGATGCAGTTC+AGG | - | chr4.1:15340332-15340351 | MS.gene023431:intron | 50.0% |
!! | CTAGCTCTGAACTTTGTCGG+AGG | + | chr4.1:15339854-15339873 | None:intergenic | 50.0% |
!! | GAGGGTGTTACCTGCAAAGT+AGG | + | chr4.1:15338629-15338648 | None:intergenic | 50.0% |
ACAAGCCTCCCTGGAACAAG+AGG | + | chr4.1:15340411-15340430 | None:intergenic | 55.0% | |
AGTTGGGGAGGCAGATCTTC+AGG | + | chr4.1:15341953-15341972 | None:intergenic | 55.0% | |
GACGAAGAAGAAGGTGGTGC+CGG | - | chr4.1:15338599-15338618 | MS.gene023431:intron | 55.0% | |
GACTGGAGTCCTCTTGTTCC+AGG | - | chr4.1:15340399-15340418 | MS.gene023431:intron | 55.0% | |
GAGTGAATCATCTTCGGCGG+CGG | - | chr4.1:15337298-15337317 | MS.gene023431:intron | 55.0% | |
GGAAAAGGACGAGGAAGAGG+AGG | - | chr4.1:15341889-15341908 | MS.gene023431:intron | 55.0% | |
GGCAGAATCTGGTCATGTGC+AGG | - | chr4.1:15338816-15338835 | MS.gene023431:intron | 55.0% | |
GTTCCAGGGAGGCTTGTATC+CGG | - | chr4.1:15340414-15340433 | MS.gene023431:intron | 55.0% | |
TCTGCGGTTCCACAACAGGT+CGG | - | chr4.1:15339819-15339838 | MS.gene023431:intron | 55.0% | |
TCTGTAGGGCTCCACTGCAA+GGG | + | chr4.1:15340765-15340784 | None:intergenic | 55.0% | |
TTACCGGATACAAGCCTCCC+TGG | + | chr4.1:15340420-15340439 | None:intergenic | 55.0% | |
TTCTGTAGGGCTCCACTGCA+AGG | + | chr4.1:15340766-15340785 | None:intergenic | 55.0% | |
! | CCGGTAAAAGTGTGGCAACC+TGG | - | chr4.1:15337335-15337354 | MS.gene023431:intron | 55.0% |
! | TGGCGTCGGGTAGTGATGAT+GGG | - | chr4.1:15341015-15341034 | MS.gene023431:CDS | 55.0% |
! | TTCTGGGAAGAGACGTGAGC+TGG | - | chr4.1:15338508-15338527 | MS.gene023431:intron | 55.0% |
! | TTGGCGTCGGGTAGTGATGA+TGG | - | chr4.1:15341014-15341033 | MS.gene023431:CDS | 55.0% |
CTGCGGTTCCACAACAGGTC+GGG | - | chr4.1:15339820-15339839 | MS.gene023431:intron | 60.0% | |
GGAGTCCTCTTGTTCCAGGG+AGG | - | chr4.1:15340403-15340422 | MS.gene023431:intron | 60.0% | |
TGAATCATCTTCGGCGGCGG+CGG | - | chr4.1:15337301-15337320 | MS.gene023431:intron | 60.0% | |
TGCCGGTGGTCCTACTTTGC+AGG | - | chr4.1:15338616-15338635 | MS.gene023431:intron | 60.0% | |
! | GAAGAAGAAGGTGGTGCCGG+TGG | - | chr4.1:15338602-15338621 | MS.gene023431:intron | 60.0% |
! | GGCGGCGGCGCCACAGGTTC+CGG | - | chr4.1:15337316-15337335 | MS.gene023431:intron | 80.0% |
! | TTCGGCGGCGGCGGCGCCAC+AGG | - | chr4.1:15337310-15337329 | MS.gene023431:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 15337137 | 15342453 | 15337137 | ID=MS.gene023431 |
chr4.1 | mRNA | 15337137 | 15342453 | 15337137 | ID=MS.gene023431.t1;Parent=MS.gene023431 |
chr4.1 | exon | 15342406 | 15342453 | 15342406 | ID=MS.gene023431.t1.exon1;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15342406 | 15342453 | 15342406 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15342140 | 15342297 | 15342140 | ID=MS.gene023431.t1.exon2;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15342140 | 15342297 | 15342140 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15341510 | 15341588 | 15341510 | ID=MS.gene023431.t1.exon3;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15341510 | 15341588 | 15341510 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15340953 | 15341132 | 15340953 | ID=MS.gene023431.t1.exon4;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15340953 | 15341132 | 15340953 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15340753 | 15340851 | 15340753 | ID=MS.gene023431.t1.exon5;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15340753 | 15340851 | 15340753 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15339155 | 15339314 | 15339155 | ID=MS.gene023431.t1.exon6;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15339155 | 15339314 | 15339155 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15338945 | 15339051 | 15338945 | ID=MS.gene023431.t1.exon7;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15338945 | 15339051 | 15338945 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15338680 | 15338819 | 15338680 | ID=MS.gene023431.t1.exon8;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15338680 | 15338819 | 15338680 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15338520 | 15338592 | 15338520 | ID=MS.gene023431.t1.exon9;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15338520 | 15338592 | 15338520 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15337931 | 15338046 | 15337931 | ID=MS.gene023431.t1.exon10;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15337931 | 15338046 | 15337931 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15337602 | 15337719 | 15337602 | ID=MS.gene023431.t1.exon11;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15337602 | 15337719 | 15337602 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
chr4.1 | exon | 15337137 | 15337268 | 15337137 | ID=MS.gene023431.t1.exon12;Parent=MS.gene023431.t1 |
chr4.1 | CDS | 15337137 | 15337268 | 15337137 | ID=cds.MS.gene023431.t1;Parent=MS.gene023431.t1 |
Gene Sequence |
Protein sequence |