Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023432.t1 | XP_013446579.1 | 98.7 | 469 | 6 | 0 | 1 | 469 | 1 | 469 | 2.10E-214 | 755 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023432.t1 | Q9BQ67 | 41.0 | 432 | 227 | 8 | 31 | 454 | 29 | 440 | 9.6e-67 | 255.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023432.t1 | A0A072TTT6 | 98.7 | 469 | 6 | 0 | 1 | 469 | 1 | 469 | 1.5e-214 | 755.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene26959 | MS.gene023432 | PPI |
MS.gene011268 | MS.gene023432 | PPI |
MS.gene053297 | MS.gene023432 | PPI |
MS.gene052717 | MS.gene023432 | PPI |
MS.gene023432 | MS.gene24284 | PPI |
MS.gene27317 | MS.gene023432 | PPI |
MS.gene07852 | MS.gene023432 | PPI |
MS.gene53345 | MS.gene023432 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023432.t1 | MTR_8g080700 | 98.934 | 469 | 5 | 0 | 1 | 469 | 1 | 469 | 0.0 | 960 |
MS.gene023432.t1 | MTR_5g024090 | 77.802 | 464 | 90 | 7 | 1 | 460 | 1 | 455 | 0.0 | 689 |
MS.gene023432.t1 | MTR_4g096880 | 29.262 | 393 | 214 | 12 | 52 | 428 | 29 | 373 | 2.95e-34 | 133 |
MS.gene023432.t1 | MTR_2g039250 | 30.218 | 321 | 182 | 10 | 155 | 450 | 151 | 454 | 1.06e-31 | 127 |
MS.gene023432.t1 | MTR_4g073080 | 30.100 | 299 | 174 | 9 | 157 | 450 | 109 | 377 | 9.08e-29 | 117 |
MS.gene023432.t1 | MTR_2g100090 | 27.246 | 334 | 185 | 12 | 155 | 450 | 110 | 423 | 1.82e-25 | 109 |
MS.gene023432.t1 | MTR_2g016160 | 25.974 | 231 | 144 | 8 | 216 | 432 | 99 | 316 | 3.33e-16 | 79.7 |
MS.gene023432.t1 | MTR_1g054300 | 33.766 | 154 | 91 | 6 | 236 | 389 | 339 | 481 | 1.85e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023432.t1 | AT2G19540 | 70.089 | 448 | 130 | 3 | 23 | 467 | 20 | 466 | 0.0 | 640 |
MS.gene023432.t1 | AT5G58230 | 28.894 | 398 | 209 | 11 | 52 | 428 | 29 | 373 | 3.11e-36 | 139 |
MS.gene023432.t1 | AT2G16780 | 29.114 | 316 | 191 | 8 | 146 | 450 | 92 | 385 | 7.21e-34 | 132 |
MS.gene023432.t1 | AT4G35050 | 29.114 | 316 | 191 | 9 | 146 | 450 | 93 | 386 | 3.90e-32 | 127 |
MS.gene023432.t1 | AT2G19520 | 28.440 | 327 | 183 | 10 | 155 | 450 | 157 | 463 | 1.31e-27 | 115 |
MS.gene023432.t1 | AT4G29730 | 27.950 | 322 | 181 | 10 | 155 | 445 | 137 | 438 | 1.22e-26 | 112 |
MS.gene023432.t1 | AT4G29730 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 6.15e-25 | 107 |
MS.gene023432.t1 | AT4G29730 | 27.541 | 305 | 171 | 9 | 155 | 429 | 137 | 421 | 6.15e-25 | 107 |
MS.gene023432.t1 | AT1G29260 | 28.108 | 185 | 114 | 6 | 216 | 394 | 98 | 269 | 1.25e-14 | 75.1 |
MS.gene023432.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 141 | 321 | 3.41e-12 | 68.2 |
MS.gene023432.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 3.66e-12 | 68.2 |
MS.gene023432.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 146 | 326 | 4.15e-12 | 67.8 |
MS.gene023432.t1 | AT4G34460 | 25.824 | 182 | 131 | 3 | 215 | 393 | 84 | 264 | 5.13e-12 | 67.4 |
Find 122 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAAGTATCCAATATTTC+TGG | 0.186014 | 4.2:+13983167 | MS.gene023432:CDS |
CAGGAGCGTTTACTTGTTCT+TGG | 0.192683 | 4.2:-13986609 | None:intergenic |
CAGAATATGGGACCTTTCTT+TGG | 0.220480 | 4.2:+13986546 | MS.gene023432:intron |
ATATTGGATGGCCTTGTCTT+AGG | 0.248468 | 4.2:+13982103 | MS.gene023432:CDS |
AAATCTTCTTGGAATTCTAT+TGG | 0.257950 | 4.2:+13983140 | MS.gene023432:CDS |
CTGCCCAAGATGCACATATA+TGG | 0.270395 | 4.2:-13983474 | None:intergenic |
TGGATAAAAGCATTGCAATA+TGG | 0.287928 | 4.2:+13985489 | MS.gene023432:CDS |
CACACAGTGTATTTCATTAC+AGG | 0.300493 | 4.2:+13982725 | MS.gene023432:CDS |
TGTGTGCCAATGCAGTTCTT+TGG | 0.305295 | 4.2:-13987013 | None:intergenic |
TGCAATATGGGATACTCGTT+TGG | 0.310651 | 4.2:+13985502 | MS.gene023432:CDS |
GTGTGCCAATGCAGTTCTTT+GGG | 0.311930 | 4.2:-13987012 | None:intergenic |
AATCTTCTTGGAATTCTATT+GGG | 0.321921 | 4.2:+13983141 | MS.gene023432:CDS |
GGCGGCGGCGCCACAGGTTC+CGG | 0.327760 | 4.2:+13981990 | MS.gene023432:CDS |
CTGTCAGTATGTCCAGTAAA+AGG | 0.330541 | 4.2:-13985285 | None:intergenic |
GACATGAGCTCTCATCTTAA+TGG | 0.333584 | 4.2:+13984960 | MS.gene023432:CDS |
AGTTGGGGAGGCAGATCTTC+AGG | 0.338811 | 4.2:-13986628 | None:intergenic |
GACTGGAGTCCTCTTGTTCC+AGG | 0.347996 | 4.2:+13985077 | MS.gene023432:CDS |
GCAATATGGGATACTCGTTT+GGG | 0.354043 | 4.2:+13985503 | MS.gene023432:CDS |
TGCCGGTGGTCCTACTTTGC+AGG | 0.355683 | 4.2:+13983292 | MS.gene023432:CDS |
ACGTCTCTTCCCAGAAATAT+TGG | 0.357236 | 4.2:-13983177 | None:intergenic |
TTCGGCGGCGGCGGCGCCAC+AGG | 0.362085 | 4.2:+13981984 | MS.gene023432:CDS |
CCAAGGAGTTGATGCAGTTC+AGG | 0.373931 | 4.2:+13985010 | MS.gene023432:CDS |
CATTGGCACACACAGATTCC+TGG | 0.384701 | 4.2:+13987024 | MS.gene023432:CDS |
CCCAGGCTGAGAAATCTTCT+TGG | 0.387294 | 4.2:+13983129 | MS.gene023432:intron |
CTCACGAAGGTTGTATTAAC+CGG | 0.388862 | 4.2:+13983428 | MS.gene023432:CDS |
TGAAACTGATGACTCTGAAA+TGG | 0.392830 | 4.2:+13983217 | MS.gene023432:CDS |
ATCAACTCCTTGGACACCTT+CGG | 0.400128 | 4.2:-13985000 | None:intergenic |
CCTGGTGAATAAACAATAGT+TGG | 0.407860 | 4.2:-13986645 | None:intergenic |
TCGTGATCTCAGACTGCTTA+AGG | 0.409527 | 4.2:+13985727 | MS.gene023432:CDS |
GAGTCATCAGTTTCACGTTT+AGG | 0.409980 | 4.2:-13983209 | None:intergenic |
GGATAAAAGCATTGCAATAT+GGG | 0.421297 | 4.2:+13985490 | MS.gene023432:CDS |
ATGGGACCTTTCTTTGGAAA+AGG | 0.423598 | 4.2:+13986552 | MS.gene023432:CDS |
TGCCCAAGATGCACATATAT+GGG | 0.425064 | 4.2:-13983473 | None:intergenic |
CTGGTGAATAAACAATAGTT+GGG | 0.426771 | 4.2:-13986644 | None:intergenic |
TGTGCATCTTGGGCAGAATC+TGG | 0.430129 | 4.2:+13983481 | MS.gene023432:CDS |
GGCTAGTTGTATGTTGGCGT+CGG | 0.431422 | 4.2:+13985679 | MS.gene023432:CDS |
TCCCCATATATGTGCATCTT+GGG | 0.431645 | 4.2:+13983471 | MS.gene023432:CDS |
AGGAGCGTTTACTTGTTCTT+GGG | 0.432127 | 4.2:-13986608 | None:intergenic |
TTTGTGCCATGGAGCGTATC+CGG | 0.432906 | 4.2:-13983447 | None:intergenic |
TGAATCATCTTCGGCGGCGG+CGG | 0.433527 | 4.2:+13981975 | MS.gene023432:CDS |
GCAGTACATACTATCATTCC+AGG | 0.440018 | 4.2:-13987042 | None:intergenic |
TTAAAGTATCCAATATTTCT+GGG | 0.447355 | 4.2:+13983168 | MS.gene023432:CDS |
TCCACACGAAGCTTCTTCAT+TGG | 0.452856 | 4.2:+13986287 | MS.gene023432:CDS |
ATCCCCATATATGTGCATCT+TGG | 0.460743 | 4.2:+13983470 | MS.gene023432:CDS |
CCTGAACTGCATCAACTCCT+TGG | 0.464940 | 4.2:-13985010 | None:intergenic |
CCAACTATTGTTTATTCACC+AGG | 0.472482 | 4.2:+13986645 | MS.gene023432:CDS |
TGGATGTGATTGGATGCTTA+TGG | 0.478480 | 4.2:-13986254 | None:intergenic |
TTTGGAAAAGGACGAGGAAG+AGG | 0.483191 | 4.2:+13986564 | MS.gene023432:CDS |
GCTAGTTGTATGTTGGCGTC+GGG | 0.490510 | 4.2:+13985680 | MS.gene023432:CDS |
AAGGTGCTTTGAATATTTGA+AGG | 0.491981 | 4.2:-13987090 | None:intergenic |
TTGGCGTCGGGTAGTGATGA+TGG | 0.493276 | 4.2:+13985692 | MS.gene023432:CDS |
ATGAAGGCTATGCTATAGAC+TGG | 0.496426 | 4.2:+13985060 | MS.gene023432:CDS |
CCGGTAAAAGTGTGGCAACC+TGG | 0.501960 | 4.2:+13982009 | MS.gene023432:CDS |
TGAATGTATTGTCATGGAAC+AGG | 0.507712 | 4.2:+13985567 | MS.gene023432:CDS |
AATCCTTTGCCACAGAATAT+GGG | 0.508159 | 4.2:+13986534 | MS.gene023432:intron |
CTCCACTCAATGGATGTGAT+TGG | 0.514101 | 4.2:-13986264 | None:intergenic |
GTTCCAGGGAGGCTTGTATC+CGG | 0.514187 | 4.2:+13985092 | MS.gene023432:CDS |
GGCAGAATCTGGTCATGTGC+AGG | 0.520350 | 4.2:+13983492 | MS.gene023432:CDS |
CCTTTCTTTGGAAAAGGACG+AGG | 0.522730 | 4.2:+13986558 | MS.gene023432:CDS |
TTCTGGGAAGAGACGTGAGC+TGG | 0.529788 | 4.2:+13983184 | MS.gene023432:CDS |
GAAACGGAGTGAATCATCTT+CGG | 0.530490 | 4.2:+13981966 | MS.gene023432:intron |
GACGAAGAAGAAGGTGGTGC+CGG | 0.530693 | 4.2:+13983275 | MS.gene023432:CDS |
CGGCATAAAACATCGTCAAA+AGG | 0.531323 | 4.2:+13981819 | MS.gene023432:CDS |
GATAGTGAAGACGAAGAAGA+AGG | 0.533242 | 4.2:+13983266 | MS.gene023432:CDS |
GAGGGTGTTACCTGCAAAGT+AGG | 0.537218 | 4.2:-13983302 | None:intergenic |
GCAACCTGGTGTGGATAAGT+TGG | 0.537432 | 4.2:+13982023 | MS.gene023432:CDS |
ACAGAAACCGAAGGTGTCCA+AGG | 0.538288 | 4.2:+13984993 | MS.gene023432:CDS |
CAATAATAGTATTTATCTGT+GGG | 0.539902 | 4.2:+13985224 | MS.gene023432:CDS |
TTACCGGATACAAGCCTCCC+TGG | 0.543277 | 4.2:-13985095 | None:intergenic |
AAATTTAAGCACAAAGATGA+AGG | 0.546613 | 4.2:+13985044 | MS.gene023432:CDS |
TTCGTGTGGACTCCACTCAA+TGG | 0.553277 | 4.2:-13986274 | None:intergenic |
GAGTGAATCATCTTCGGCGG+CGG | 0.557113 | 4.2:+13981972 | MS.gene023432:CDS |
GCAATAATAGTATTTATCTG+TGG | 0.558281 | 4.2:+13985223 | MS.gene023432:CDS |
ATAGTATGTACTGCAGCAGA+TGG | 0.561830 | 4.2:+13987051 | MS.gene023432:CDS |
TTCCATGTTGCAGCAGATGT+AGG | 0.568203 | 4.2:-13985249 | None:intergenic |
TGGAGAGAATTGTAAGCAGA+AGG | 0.568749 | 4.2:-13982072 | None:intergenic |
ACAAGCCTCCCTGGAACAAG+AGG | 0.572225 | 4.2:-13985086 | None:intergenic |
TGTGCTTGAAAAGACGCAGC+TGG | 0.573745 | 4.2:-13985533 | None:intergenic |
AAGACCCCAAAGAACTGCAT+TGG | 0.573867 | 4.2:+13987007 | MS.gene023432:CDS |
TAGGTTGGCTAGTTGTATGT+TGG | 0.574859 | 4.2:+13985673 | MS.gene023432:intron |
GCCATCCAATATGAAAAGCA+TGG | 0.576629 | 4.2:-13982092 | None:intergenic |
TTTGAATATTTGAAGGCATG+AGG | 0.577378 | 4.2:-13987083 | None:intergenic |
TCTTCCAACTTATCCACACC+AGG | 0.583170 | 4.2:-13982027 | None:intergenic |
TGTGCCAATGCAGTTCTTTG+GGG | 0.585321 | 4.2:-13987011 | None:intergenic |
AGCCTACATCTGCTGCAACA+TGG | 0.586634 | 4.2:+13985247 | MS.gene023432:CDS |
TTCTGTTCGAACTAAACCCA+TGG | 0.588801 | 4.2:-13982696 | None:intergenic |
AAAAGTGTGGCAACCTGGTG+TGG | 0.591077 | 4.2:+13982014 | MS.gene023432:CDS |
GTATTTCATTACAGGGACAC+AGG | 0.601861 | 4.2:+13982733 | MS.gene023432:CDS |
CTGATGTGAATGTATTGTCA+TGG | 0.604527 | 4.2:+13985561 | MS.gene023432:CDS |
TACCTGCAAAGTAGGACCAC+CGG | 0.605560 | 4.2:-13983294 | None:intergenic |
TTACGTAAGTTGATTATCAG+CGG | 0.605575 | 4.2:-13986319 | None:intergenic |
TGGCGTCGGGTAGTGATGAT+GGG | 0.605656 | 4.2:+13985693 | MS.gene023432:CDS |
TATTAACCGGATACGCTCCA+TGG | 0.608736 | 4.2:+13983441 | MS.gene023432:CDS |
ACACAGTGTATTTCATTACA+GGG | 0.609707 | 4.2:+13982726 | MS.gene023432:CDS |
GGAAAAGGACGAGGAAGAGG+AGG | 0.612345 | 4.2:+13986567 | MS.gene023432:CDS |
GAAGAAGAAGGTGGTGCCGG+TGG | 0.612395 | 4.2:+13983278 | MS.gene023432:CDS |
ACTGATGACTCTGAAATGGA+TGG | 0.615606 | 4.2:+13983221 | MS.gene023432:CDS |
CACAGGTTCCGGTAAAAGTG+TGG | 0.622299 | 4.2:+13982001 | MS.gene023432:CDS |
ACTGGAGTCCTCTTGTTCCA+GGG | 0.624385 | 4.2:+13985078 | MS.gene023432:CDS |
GTATTCAAAATGCGCTACCA+CGG | 0.630470 | 4.2:-13986232 | None:intergenic |
TGAATAAACAATAGTTGGGG+AGG | 0.631441 | 4.2:-13986640 | None:intergenic |
AAAGGCAAAGAGCAAGAACA+AGG | 0.634436 | 4.2:+13981837 | MS.gene023432:CDS |
ATCCAATCACATCCATTGAG+TGG | 0.634447 | 4.2:+13986262 | MS.gene023432:CDS |
GGAGTCCTCTTGTTCCAGGG+AGG | 0.636093 | 4.2:+13985081 | MS.gene023432:CDS |
TCATGCAGCTTCTGATGGCA+AGG | 0.636729 | 4.2:-13987109 | None:intergenic |
TGACTCTGAAATGGATGGTG+AGG | 0.638725 | 4.2:+13983226 | MS.gene023432:CDS |
GCCAATGAAGAAGCTTCGTG+TGG | 0.638913 | 4.2:-13986288 | None:intergenic |
TGAATAGGAAGGAGATTCCG+TGG | 0.641695 | 4.2:+13986215 | MS.gene023432:intron |
GTGTATCATGCAGCTTCTGA+TGG | 0.643240 | 4.2:-13987114 | None:intergenic |
TGGTGAGGATAGTGATAGCG+AGG | 0.651927 | 4.2:+13983241 | MS.gene023432:CDS |
GTAATGAAATACACTGTGTG+TGG | 0.652047 | 4.2:-13982722 | None:intergenic |
GCCCAAGATGCACATATATG+GGG | 0.653392 | 4.2:-13983472 | None:intergenic |
TTCACACCTACAGTTGCGGA+AGG | 0.659965 | 4.2:+13983402 | MS.gene023432:intron |
AACTAATTGAAGATGACTCG+CGG | 0.660356 | 4.2:+13981799 | None:intergenic |
TTTGTTCTTTACCTAAGACA+AGG | 0.662595 | 4.2:-13982114 | None:intergenic |
TGGTGAATAAACAATAGTTG+GGG | 0.666731 | 4.2:-13986643 | None:intergenic |
AGTGAAGACGAAGAAGAAGG+TGG | 0.675905 | 4.2:+13983269 | MS.gene023432:CDS |
ACGGAGTGAATCATCTTCGG+CGG | 0.677615 | 4.2:+13981969 | MS.gene023432:CDS |
CAATATGGGATACTCGTTTG+GGG | 0.693736 | 4.2:+13985504 | MS.gene023432:CDS |
TATGGGATACTCGTTTGGGG+AGG | 0.701784 | 4.2:+13985507 | MS.gene023432:CDS |
CTAGCAGAGACAGAAACCGA+AGG | 0.726742 | 4.2:+13984984 | MS.gene023432:CDS |
TTGCGGAAGGTAACTCACGA+AGG | 0.747550 | 4.2:+13983415 | MS.gene023432:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTAAATATATCTAATCA+AGG | - | chr4.2:13986949-13986968 | None:intergenic | 10.0% |
!! | AATAACAAAAACAAAATAGT+CGG | - | chr4.2:13986167-13986186 | None:intergenic | 15.0% |
!! | AATATTATCTATACTAATGT+TGG | - | chr4.2:13984476-13984495 | None:intergenic | 15.0% |
!! | ATTTCAAAGATTAACTTATA+AGG | - | chr4.2:13984376-13984395 | None:intergenic | 15.0% |
!!! | AAGTTCATTATTTTTTGAAT+AGG | + | chr4.2:13986200-13986219 | MS.gene023432:intron | 15.0% |
!!! | ATAAGTTAATCTTTGAAATA+TGG | + | chr4.2:13984377-13984396 | MS.gene023432:intron | 15.0% |
!!! | CAACATATTGAAATTTTTTA+AGG | + | chr4.2:13984780-13984799 | MS.gene023432:intron | 15.0% |
!!! | TCATGATTTATTTTTTGTTT+GGG | + | chr4.2:13982642-13982661 | MS.gene023432:intron | 15.0% |
!!! | TTTTGAAAAAATTGAAGAAA+CGG | + | chr4.2:13981950-13981969 | MS.gene023432:intron | 15.0% |
!! | AAGTAAAAATTCATATGAAG+AGG | - | chr4.2:13983324-13983343 | None:intergenic | 20.0% |
!! | AATCCAAAGTAAGAAAAATA+AGG | - | chr4.2:13986500-13986519 | None:intergenic | 20.0% |
!! | AGTAAAAATTCATATGAAGA+GGG | - | chr4.2:13983323-13983342 | None:intergenic | 20.0% |
!! | ATAAATCCCTGAAATTTATT+AGG | - | chr4.2:13986397-13986416 | None:intergenic | 20.0% |
!! | CAATAATAGTATTTATCTGT+GGG | + | chr4.2:13985224-13985243 | MS.gene023432:CDS | 20.0% |
!! | TAATGATGTAATATGCTATT+AGG | - | chr4.2:13985953-13985972 | None:intergenic | 20.0% |
!! | TATAGTACTAAACAAACTAT+GGG | - | chr4.2:13984403-13984422 | None:intergenic | 20.0% |
!! | TGTGAAACATATGTATAAAA+TGG | + | chr4.2:13984340-13984359 | MS.gene023432:intron | 20.0% |
!! | TTATAGTACTAAACAAACTA+TGG | - | chr4.2:13984404-13984423 | None:intergenic | 20.0% |
!! | TTGAACAAAAATATACAACT+CGG | - | chr4.2:13984907-13984926 | None:intergenic | 20.0% |
!!! | AGAAAGTTTACAATTTTGTA+TGG | - | chr4.2:13985791-13985810 | None:intergenic | 20.0% |
!!! | CATGATTTATTTTTTGTTTG+GGG | + | chr4.2:13982643-13982662 | MS.gene023432:intron | 20.0% |
!!! | GAGTTAATTTTTTTAATCGA+CGG | + | chr4.2:13983583-13983602 | MS.gene023432:intron | 20.0% |
!!! | GTCATGATTTATTTTTTGTT+TGG | + | chr4.2:13982641-13982660 | MS.gene023432:intron | 20.0% |
!!! | TAGAATTTTTTGTCCTTTAA+TGG | + | chr4.2:13982890-13982909 | MS.gene023432:intron | 20.0% |
!!! | TAGTATAGATAATATTTCTG+CGG | + | chr4.2:13984480-13984499 | MS.gene023432:intron | 20.0% |
!!! | TCATTATTTTTTGAATAGGA+AGG | + | chr4.2:13986204-13986223 | MS.gene023432:intron | 20.0% |
!!! | TTAAAGTATCCAATATTTCT+GGG | + | chr4.2:13983168-13983187 | MS.gene023432:CDS | 20.0% |
!!! | TTAAGGTTCTTAAATTTTAG+CGG | + | chr4.2:13984797-13984816 | MS.gene023432:intron | 20.0% |
!!! | TTTAAAGTATCCAATATTTC+TGG | + | chr4.2:13983167-13983186 | MS.gene023432:CDS | 20.0% |
!!! | TTTGTATGGTTTTTCTATAT+GGG | - | chr4.2:13985777-13985796 | None:intergenic | 20.0% |
!!! | TTTTGTATGGTTTTTCTATA+TGG | - | chr4.2:13985778-13985797 | None:intergenic | 20.0% |
! | AAAACTCAAAAGTCCATTAA+AGG | - | chr4.2:13982906-13982925 | None:intergenic | 25.0% |
! | AAATCTTCTTGGAATTCTAT+TGG | + | chr4.2:13983140-13983159 | MS.gene023432:CDS | 25.0% |
! | AAATTTAAGCACAAAGATGA+AGG | + | chr4.2:13985044-13985063 | MS.gene023432:CDS | 25.0% |
! | AAGAATTATGACATTGTGAT+TGG | + | chr4.2:13982442-13982461 | MS.gene023432:intron | 25.0% |
! | AATCATTCAACTGTTAATGT+GGG | - | chr4.2:13984075-13984094 | None:intergenic | 25.0% |
! | AATCTTCTTGGAATTCTATT+GGG | + | chr4.2:13983141-13983160 | MS.gene023432:CDS | 25.0% |
! | AATGAAATACAACAGATATG+AGG | - | chr4.2:13985645-13985664 | None:intergenic | 25.0% |
! | ACGAATTCCTAATAAATTTC+AGG | + | chr4.2:13986387-13986406 | MS.gene023432:intron | 25.0% |
! | ATAATTCAATGTAGTCACTT+GGG | + | chr4.2:13982335-13982354 | MS.gene023432:intron | 25.0% |
! | CATATTTCATACTATGTTAG+TGG | + | chr4.2:13983669-13983688 | MS.gene023432:intron | 25.0% |
! | CGAATTCCTAATAAATTTCA+GGG | + | chr4.2:13986388-13986407 | MS.gene023432:intron | 25.0% |
! | CGTAATAAATTTGTAGATCT+GGG | + | chr4.2:13984938-13984957 | MS.gene023432:intron | 25.0% |
! | GCAATAATAGTATTTATCTG+TGG | + | chr4.2:13985223-13985242 | MS.gene023432:CDS | 25.0% |
! | GTTTCTCTCATATTATCTTT+GGG | + | chr4.2:13986420-13986439 | MS.gene023432:intron | 25.0% |
! | TAAATTTAGCTACATGATTG+TGG | + | chr4.2:13984261-13984280 | MS.gene023432:intron | 25.0% |
! | TAACAGCAAAATTACTGTAT+AGG | + | chr4.2:13985818-13985837 | MS.gene023432:intron | 25.0% |
! | TAATATGCTATTAGGACATA+AGG | - | chr4.2:13985945-13985964 | None:intergenic | 25.0% |
! | TAGAATGTATAAGATTGAAG+TGG | + | chr4.2:13984232-13984251 | MS.gene023432:intron | 25.0% |
! | TCAAAATGACAAAATATGTG+TGG | - | chr4.2:13984188-13984207 | None:intergenic | 25.0% |
! | TCAACTTACGTAAGTAAATA+CGG | + | chr4.2:13986329-13986348 | MS.gene023432:intron | 25.0% |
! | TCATTGTCAAAGTAGATATA+AGG | + | chr4.2:13985168-13985187 | MS.gene023432:intron | 25.0% |
! | TGTTTCTCTCATATTATCTT+TGG | + | chr4.2:13986419-13986438 | MS.gene023432:intron | 25.0% |
! | TTATCTATACTAATGTTGGT+AGG | - | chr4.2:13984472-13984491 | None:intergenic | 25.0% |
!! | AGCTTTTGTATAATGAAAGA+AGG | - | chr4.2:13986888-13986907 | None:intergenic | 25.0% |
!! | ATTGAAAAAACTCCTTTTAC+TGG | + | chr4.2:13985273-13985292 | MS.gene023432:CDS | 25.0% |
!! | TCTTGTGTGTTTTCTTTTAT+AGG | + | chr4.2:13982771-13982790 | MS.gene023432:intron | 25.0% |
!! | TTAAACTATGAGCAACTTTT+TGG | - | chr4.2:13983636-13983655 | None:intergenic | 25.0% |
!! | TTCAAGTTAAAGGAAATAAG+AGG | - | chr4.2:13986976-13986995 | None:intergenic | 25.0% |
!! | TTGTGCTTAAATTTTTGTAG+TGG | - | chr4.2:13985038-13985057 | None:intergenic | 25.0% |
!!! | AATAAAACCCATTATTTTGC+TGG | + | chr4.2:13982169-13982188 | MS.gene023432:intron | 25.0% |
!!! | ATTCTGCTTTTTATTTTCTG+TGG | + | chr4.2:13981906-13981925 | MS.gene023432:intron | 25.0% |
!!! | ATTTCCTTTAACTTGAAACA+GGG | + | chr4.2:13986979-13986998 | MS.gene023432:intron | 25.0% |
!!! | GGACTTTATTGTTTTTGTTA+TGG | + | chr4.2:13984286-13984305 | MS.gene023432:intron | 25.0% |
!!! | TATTTCCTTTAACTTGAAAC+AGG | + | chr4.2:13986978-13986997 | MS.gene023432:intron | 25.0% |
!!! | TTCTGCTTTTTATTTTCTGT+GGG | + | chr4.2:13981907-13981926 | MS.gene023432:intron | 25.0% |
!!! | TTGAACCAAGTTATTTCTAT+TGG | + | chr4.2:13983818-13983837 | MS.gene023432:intron | 25.0% |
!!! | TTTTTCTTGTTTCAATGTTG+TGG | + | chr4.2:13983851-13983870 | MS.gene023432:intron | 25.0% |
AAAATAAGCCCAATGATTAC+CGG | - | chr4.2:13985114-13985133 | None:intergenic | 30.0% | |
AAAGCTAGTAAAACATGACT+AGG | - | chr4.2:13983053-13983072 | None:intergenic | 30.0% | |
AACAAAAACAAAATAGTCGG+CGG | - | chr4.2:13986164-13986183 | None:intergenic | 30.0% | |
AACCTAGCTTATACTCAAAT+AGG | - | chr4.2:13986816-13986835 | None:intergenic | 30.0% | |
AATAAAGTGCGAGATCAAAA+GGG | - | chr4.2:13981889-13981908 | None:intergenic | 30.0% | |
ACACAGTGTATTTCATTACA+GGG | + | chr4.2:13982726-13982745 | MS.gene023432:CDS | 30.0% | |
ACTTCTTTGATAGAAAGAGA+TGG | - | chr4.2:13984864-13984883 | None:intergenic | 30.0% | |
AGGATAAATTATTCTGTTCC+AGG | + | chr4.2:13984569-13984588 | MS.gene023432:intron | 30.0% | |
ATCATTCAACTGTTAATGTG+GGG | - | chr4.2:13984074-13984093 | None:intergenic | 30.0% | |
ATGTTGATCTTCATGTTTGT+AGG | + | chr4.2:13985195-13985214 | MS.gene023432:intron | 30.0% | |
ATGTTGCAATTGCAATACTT+AGG | - | chr4.2:13984634-13984653 | None:intergenic | 30.0% | |
CAATCATTCAACTGTTAATG+TGG | - | chr4.2:13984076-13984095 | None:intergenic | 30.0% | |
CATAATTCAATGTAGTCACT+TGG | + | chr4.2:13982334-13982353 | MS.gene023432:intron | 30.0% | |
CTGATCCAATAGAAATAACT+TGG | - | chr4.2:13983826-13983845 | None:intergenic | 30.0% | |
CTGGTGAATAAACAATAGTT+GGG | - | chr4.2:13986647-13986666 | None:intergenic | 30.0% | |
CTTAGTAGAACATTGTCAAA+GGG | - | chr4.2:13984028-13984047 | None:intergenic | 30.0% | |
GATAACTCCAGCAAAATAAT+GGG | - | chr4.2:13982179-13982198 | None:intergenic | 30.0% | |
GATGCTTTAATTGTCTTATC+TGG | + | chr4.2:13985896-13985915 | MS.gene023432:intron | 30.0% | |
GCGTAATAAATTTGTAGATC+TGG | + | chr4.2:13984937-13984956 | MS.gene023432:intron | 30.0% | |
GCTTTAACCAAACATTTACT+TGG | - | chr4.2:13983550-13983569 | None:intergenic | 30.0% | |
GTAAGAAAAATAAGGCAGTT+TGG | - | chr4.2:13986492-13986511 | None:intergenic | 30.0% | |
GTAGTAAATGAGCCATTATT+TGG | + | chr4.2:13983693-13983712 | MS.gene023432:intron | 30.0% | |
TAGAATGAAAATTGAGTCGA+TGG | - | chr4.2:13985617-13985636 | None:intergenic | 30.0% | |
TCCTTCAAAAATGCATTTCT+GGG | - | chr4.2:13986062-13986081 | None:intergenic | 30.0% | |
TCTTAGTAGAACATTGTCAA+AGG | - | chr4.2:13984029-13984048 | None:intergenic | 30.0% | |
TGATAACTCCAGCAAAATAA+TGG | - | chr4.2:13982180-13982199 | None:intergenic | 30.0% | |
TGGTGAATAAACAATAGTTG+GGG | - | chr4.2:13986646-13986665 | None:intergenic | 30.0% | |
TGTATTTCATTGTACTGAGT+AGG | + | chr4.2:13985654-13985673 | MS.gene023432:intron | 30.0% | |
TGTCATAATTCTTGTGAAAG+AGG | - | chr4.2:13982435-13982454 | None:intergenic | 30.0% | |
TGTTGATCTTCATGTTTGTA+GGG | + | chr4.2:13985196-13985215 | MS.gene023432:intron | 30.0% | |
TTCCTTCAAAAATGCATTTC+TGG | - | chr4.2:13986063-13986082 | None:intergenic | 30.0% | |
TTTCACAATTAATGTCTGCA+TGG | - | chr4.2:13984327-13984346 | None:intergenic | 30.0% | |
TTTGTTCTTTACCTAAGACA+AGG | - | chr4.2:13982117-13982136 | None:intergenic | 30.0% | |
! | AAGGTGCTTTGAATATTTGA+AGG | - | chr4.2:13987093-13987112 | None:intergenic | 30.0% |
! | AGGAACTTTTTATCGGAAAA+TGG | - | chr4.2:13985925-13985944 | None:intergenic | 30.0% |
! | AGTTGATCTTACTGACATTT+TGG | + | chr4.2:13983374-13983393 | MS.gene023432:intron | 30.0% |
! | GGACATAAGGAACTTTTTAT+CGG | - | chr4.2:13985932-13985951 | None:intergenic | 30.0% |
! | TATTGCAATGCTTTTATCCA+CGG | - | chr4.2:13985489-13985508 | None:intergenic | 30.0% |
! | TGACATAGAATTGGTAACAT+TGG | - | chr4.2:13982468-13982487 | None:intergenic | 30.0% |
! | TTTGAATATTTGAAGGCATG+AGG | - | chr4.2:13987086-13987105 | None:intergenic | 30.0% |
!! | AGTATCTCGTTTGATTTGAT+AGG | + | chr4.2:13984549-13984568 | MS.gene023432:intron | 30.0% |
!! | AGTTATTTCTATTGGATCAG+AGG | + | chr4.2:13983826-13983845 | MS.gene023432:intron | 30.0% |
!! | GGATAAAAGCATTGCAATAT+GGG | + | chr4.2:13985490-13985509 | MS.gene023432:CDS | 30.0% |
!! | GTAACGGAAAAGTTGATATT+GGG | + | chr4.2:13982847-13982866 | MS.gene023432:intron | 30.0% |
!! | GTTATTTCTATTGGATCAGA+GGG | + | chr4.2:13983827-13983846 | MS.gene023432:intron | 30.0% |
!! | TGGATAAAAGCATTGCAATA+TGG | + | chr4.2:13985489-13985508 | MS.gene023432:CDS | 30.0% |
!! | TTACGTAAGTTGATTATCAG+CGG | - | chr4.2:13986322-13986341 | None:intergenic | 30.0% |
!!! | AGTTTTAAAAACCCTATGAC+TGG | + | chr4.2:13983517-13983536 | MS.gene023432:intron | 30.0% |
!!! | CTGCCTTATTTTTCTTACTT+TGG | + | chr4.2:13986494-13986513 | MS.gene023432:intron | 30.0% |
!!! | GAATGTTGTTATTTTGCCAT+GGG | + | chr4.2:13983969-13983988 | MS.gene023432:intron | 30.0% |
!!! | TGAATGTTGTTATTTTGCCA+TGG | + | chr4.2:13983968-13983987 | MS.gene023432:intron | 30.0% |
AAAGTGAGTATTTGAGAGCT+TGG | + | chr4.2:13984109-13984128 | MS.gene023432:intron | 35.0% | |
AAGCAAACGCACAAAAATTG+TGG | - | chr4.2:13982589-13982608 | None:intergenic | 35.0% | |
AATCCTTTGCCACAGAATAT+GGG | + | chr4.2:13986534-13986553 | MS.gene023432:intron | 35.0% | |
ACACTGAAATGTTCCGAAAA+AGG | - | chr4.2:13985352-13985371 | None:intergenic | 35.0% | |
ACCAAACATTTACTTGGCTA+AGG | - | chr4.2:13983544-13983563 | None:intergenic | 35.0% | |
ACTGTTCATTACCGATCAAA+TGG | + | chr4.2:13982823-13982842 | MS.gene023432:intron | 35.0% | |
AGCCTATTTGAGTATAAGCT+AGG | + | chr4.2:13986811-13986830 | MS.gene023432:intron | 35.0% | |
ATAGCACAAAGGATTCACAA+TGG | + | chr4.2:13983878-13983897 | MS.gene023432:intron | 35.0% | |
CAAAAACATGAGGTTCTGTA+GGG | - | chr4.2:13985457-13985476 | None:intergenic | 35.0% | |
CACACAGTGTATTTCATTAC+AGG | + | chr4.2:13982725-13982744 | MS.gene023432:CDS | 35.0% | |
CATGCAACATATTATCAACG+AGG | - | chr4.2:13983106-13983125 | None:intergenic | 35.0% | |
CCAACTATTGTTTATTCACC+AGG | + | chr4.2:13986645-13986664 | MS.gene023432:CDS | 35.0% | |
CCTGGTGAATAAACAATAGT+TGG | - | chr4.2:13986648-13986667 | None:intergenic | 35.0% | |
CTAATCAAGGAGTTCTATCA+TGG | - | chr4.2:13986936-13986955 | None:intergenic | 35.0% | |
CTGATGTGAATGTATTGTCA+TGG | + | chr4.2:13985561-13985580 | MS.gene023432:CDS | 35.0% | |
CTGGAGTTATCACTGTTAAA+TGG | + | chr4.2:13982188-13982207 | MS.gene023432:intron | 35.0% | |
CTGTTCATTACCGATCAAAT+GGG | + | chr4.2:13982824-13982843 | MS.gene023432:intron | 35.0% | |
CTTGGGTAATGACAAAATCT+GGG | - | chr4.2:13984002-13984021 | None:intergenic | 35.0% | |
GAATAAAGTGCGAGATCAAA+AGG | - | chr4.2:13981890-13981909 | None:intergenic | 35.0% | |
GATACGACAGAAAAGTTGAA+GGG | - | chr4.2:13983721-13983740 | None:intergenic | 35.0% | |
GCAAAGTGATTCAAATTACC+TGG | - | chr4.2:13986666-13986685 | None:intergenic | 35.0% | |
GTAATGAAATACACTGTGTG+TGG | - | chr4.2:13982725-13982744 | None:intergenic | 35.0% | |
GTTGATCTTCATGTTTGTAG+GGG | + | chr4.2:13985197-13985216 | MS.gene023432:intron | 35.0% | |
TAATCCTTTGCCACAGAATA+TGG | + | chr4.2:13986533-13986552 | MS.gene023432:intron | 35.0% | |
TAGCACAAAGGATTCACAAT+GGG | + | chr4.2:13983879-13983898 | MS.gene023432:intron | 35.0% | |
TATTTGCAGAGTCCATGAAA+GGG | - | chr4.2:13986451-13986470 | None:intergenic | 35.0% | |
TCATAGCTCTTGAATTGCAA+TGG | - | chr4.2:13982256-13982275 | None:intergenic | 35.0% | |
TCATTCAACTGTTAATGTGG+GGG | - | chr4.2:13984073-13984092 | None:intergenic | 35.0% | |
TCCTTAGCCAAGTAAATGTT+TGG | + | chr4.2:13983540-13983559 | MS.gene023432:intron | 35.0% | |
TCTTTCCTACATGCTATTAG+TGG | + | chr4.2:13983744-13983763 | MS.gene023432:intron | 35.0% | |
TGAATAAACAATAGTTGGGG+AGG | - | chr4.2:13986643-13986662 | None:intergenic | 35.0% | |
TGAATGTATTGTCATGGAAC+AGG | + | chr4.2:13985567-13985586 | MS.gene023432:CDS | 35.0% | |
TGATACGACAGAAAAGTTGA+AGG | - | chr4.2:13983722-13983741 | None:intergenic | 35.0% | |
TGTCTCATGAATCATCTTGA+AGG | + | chr4.2:13982795-13982814 | MS.gene023432:intron | 35.0% | |
TGTTCATTACCGATCAAATG+GGG | + | chr4.2:13982825-13982844 | MS.gene023432:intron | 35.0% | |
TTATTTGCAGAGTCCATGAA+AGG | - | chr4.2:13986452-13986471 | None:intergenic | 35.0% | |
TTTAGCTACATGATTGTGGT+TGG | + | chr4.2:13984265-13984284 | MS.gene023432:intron | 35.0% | |
TTTCATTGTACTGAGTAGGT+TGG | + | chr4.2:13985658-13985677 | MS.gene023432:intron | 35.0% | |
! | ACCCAGAAATGCATTTTTGA+AGG | + | chr4.2:13986058-13986077 | MS.gene023432:intron | 35.0% |
! | ATTGGTGACATTGGTAACAT+TGG | + | chr4.2:13982378-13982397 | MS.gene023432:intron | 35.0% |
! | CAGGTATAATTTTTGCCCTT+GGG | + | chr4.2:13984588-13984607 | MS.gene023432:intron | 35.0% |
! | GATATTTTACGTGACACCAT+GGG | + | chr4.2:13982680-13982699 | MS.gene023432:CDS | 35.0% |
! | GGTTTTTCTATATGGGCAAA+GGG | - | chr4.2:13985770-13985789 | None:intergenic | 35.0% |
! | GTTTTTCTATATGGGCAAAG+GGG | - | chr4.2:13985769-13985788 | None:intergenic | 35.0% |
! | TCCATGCTTTTCATATTGGA+TGG | + | chr4.2:13982091-13982110 | MS.gene023432:CDS | 35.0% |
! | TCTAATGAGTTGAAGTTTGC+TGG | + | chr4.2:13984209-13984228 | MS.gene023432:intron | 35.0% |
! | TCTCTCCATGCTTTTCATAT+TGG | + | chr4.2:13982087-13982106 | MS.gene023432:CDS | 35.0% |
! | TGAAACTGATGACTCTGAAA+TGG | + | chr4.2:13983217-13983236 | MS.gene023432:CDS | 35.0% |
! | TGACATAGAATTGGTGACAT+TGG | + | chr4.2:13982369-13982388 | MS.gene023432:intron | 35.0% |
! | TGGTTTTTCTATATGGGCAA+AGG | - | chr4.2:13985771-13985790 | None:intergenic | 35.0% |
!! | ATACTAGCTCTGAACTTTGT+CGG | - | chr4.2:13984534-13984553 | None:intergenic | 35.0% |
!! | GGTAACGGAAAAGTTGATAT+TGG | + | chr4.2:13982846-13982865 | MS.gene023432:intron | 35.0% |
!! | TTAAATTTTAGCGGCAGCTA+AGG | + | chr4.2:13984806-13984825 | MS.gene023432:intron | 35.0% |
!! | TTGTCCCTGTTTCAAGTTAA+AGG | - | chr4.2:13986986-13987005 | None:intergenic | 35.0% |
!!! | AGGTATTCAGCATTGACTTT+TGG | + | chr4.2:13985587-13985606 | MS.gene023432:intron | 35.0% |
!!! | GCAAATTGCACTGATTGTTT+TGG | + | chr4.2:13983943-13983962 | MS.gene023432:intron | 35.0% |
AAAGGCAAAGAGCAAGAACA+AGG | + | chr4.2:13981837-13981856 | MS.gene023432:CDS | 40.0% | |
AACATTGTCAAAGGGATGCT+TGG | - | chr4.2:13984020-13984039 | None:intergenic | 40.0% | |
AAGAAAGGTCCCATATTCTG+TGG | - | chr4.2:13986546-13986565 | None:intergenic | 40.0% | |
AAGGAACTTCTAGATGCACT+TGG | + | chr4.2:13986077-13986096 | MS.gene023432:intron | 40.0% | |
ACATTGTCAAAGGGATGCTT+GGG | - | chr4.2:13984019-13984038 | None:intergenic | 40.0% | |
ACGTCTCTTCCCAGAAATAT+TGG | - | chr4.2:13983180-13983199 | None:intergenic | 40.0% | |
AGAGCTTGGAATTGTAACTG+AGG | + | chr4.2:13984123-13984142 | MS.gene023432:intron | 40.0% | |
AGGATTCACAATGGGAATAG+AGG | + | chr4.2:13983887-13983906 | MS.gene023432:intron | 40.0% | |
AGTAACCTCATTTGTACCCA+AGG | - | chr4.2:13984607-13984626 | None:intergenic | 40.0% | |
ATACCGACACTTCTGATTGA+AGG | - | chr4.2:13982541-13982560 | None:intergenic | 40.0% | |
ATAGTATGTACTGCAGCAGA+TGG | + | chr4.2:13987051-13987070 | MS.gene023432:CDS | 40.0% | |
ATCCAATCACATCCATTGAG+TGG | + | chr4.2:13986262-13986281 | MS.gene023432:CDS | 40.0% | |
ATCCCCATATATGTGCATCT+TGG | + | chr4.2:13983470-13983489 | MS.gene023432:CDS | 40.0% | |
ATGAAGGCTATGCTATAGAC+TGG | + | chr4.2:13985060-13985079 | MS.gene023432:CDS | 40.0% | |
CAATATGGGATACTCGTTTG+GGG | + | chr4.2:13985504-13985523 | MS.gene023432:CDS | 40.0% | |
CAGAATATGGGACCTTTCTT+TGG | + | chr4.2:13986546-13986565 | MS.gene023432:intron | 40.0% | |
CCAAGGGCAAAAATTATACC+TGG | - | chr4.2:13984590-13984609 | None:intergenic | 40.0% | |
CGGCATAAAACATCGTCAAA+AGG | + | chr4.2:13981819-13981838 | MS.gene023432:CDS | 40.0% | |
CTCACGAAGGTTGTATTAAC+CGG | + | chr4.2:13983428-13983447 | MS.gene023432:CDS | 40.0% | |
CTGTCAGTATGTCCAGTAAA+AGG | - | chr4.2:13985288-13985307 | None:intergenic | 40.0% | |
GAAACGGAGTGAATCATCTT+CGG | + | chr4.2:13981966-13981985 | MS.gene023432:intron | 40.0% | |
GAATTCGTCCAACAATTCTG+TGG | - | chr4.2:13986375-13986394 | None:intergenic | 40.0% | |
GACATGAGCTCTCATCTTAA+TGG | + | chr4.2:13984960-13984979 | MS.gene023432:CDS | 40.0% | |
GAGCAAGAAGCAAAAACATG+AGG | - | chr4.2:13985467-13985486 | None:intergenic | 40.0% | |
GAGTCATCAGTTTCACGTTT+AGG | - | chr4.2:13983212-13983231 | None:intergenic | 40.0% | |
GATAGTGAAGACGAAGAAGA+AGG | + | chr4.2:13983266-13983285 | MS.gene023432:CDS | 40.0% | |
GCAAAAACATGAGGTTCTGT+AGG | - | chr4.2:13985458-13985477 | None:intergenic | 40.0% | |
GCAATATGGGATACTCGTTT+GGG | + | chr4.2:13985503-13985522 | MS.gene023432:CDS | 40.0% | |
GCACTTGAGTGACATAGAAT+TGG | - | chr4.2:13982477-13982496 | None:intergenic | 40.0% | |
GCAGTACATACTATCATTCC+AGG | - | chr4.2:13987045-13987064 | None:intergenic | 40.0% | |
GCCATCCAATATGAAAAGCA+TGG | - | chr4.2:13982095-13982114 | None:intergenic | 40.0% | |
GCTCAACAATGAGTACGTTT+GGG | + | chr4.2:13986684-13986703 | MS.gene023432:intron | 40.0% | |
GCTTGGGTAATGACAAAATC+TGG | - | chr4.2:13984003-13984022 | None:intergenic | 40.0% | |
GCTTGTATCCGGTAATCATT+GGG | + | chr4.2:13985103-13985122 | MS.gene023432:intron | 40.0% | |
GGATTCACAATGGGAATAGA+GGG | + | chr4.2:13983888-13983907 | MS.gene023432:intron | 40.0% | |
GTAACCTCATTTGTACCCAA+GGG | - | chr4.2:13984606-13984625 | None:intergenic | 40.0% | |
GTATTCAAAATGCGCTACCA+CGG | - | chr4.2:13986235-13986254 | None:intergenic | 40.0% | |
GTATTTCATTACAGGGACAC+AGG | + | chr4.2:13982733-13982752 | MS.gene023432:CDS | 40.0% | |
TACACCATCCACAGAATTGT+TGG | + | chr4.2:13986364-13986383 | MS.gene023432:intron | 40.0% | |
TCAACTTCAACACAGTCAAG+AGG | - | chr4.2:13983360-13983379 | None:intergenic | 40.0% | |
TCAGACTGCTTAAGGTATGT+TGG | + | chr4.2:13985735-13985754 | MS.gene023432:intron | 40.0% | |
TCCCCATATATGTGCATCTT+GGG | + | chr4.2:13983471-13983490 | MS.gene023432:CDS | 40.0% | |
TGCAATATGGGATACTCGTT+TGG | + | chr4.2:13985502-13985521 | MS.gene023432:CDS | 40.0% | |
TGCCCAAGATGCACATATAT+GGG | - | chr4.2:13983476-13983495 | None:intergenic | 40.0% | |
TGCTCAACAATGAGTACGTT+TGG | + | chr4.2:13986683-13986702 | MS.gene023432:intron | 40.0% | |
TGGAGAGAATTGTAAGCAGA+AGG | - | chr4.2:13982075-13982094 | None:intergenic | 40.0% | |
TGGATGTGATTGGATGCTTA+TGG | - | chr4.2:13986257-13986276 | None:intergenic | 40.0% | |
TTACCGATCAAATGGGGTAA+CGG | + | chr4.2:13982831-13982850 | MS.gene023432:intron | 40.0% | |
TTCTGTTCGAACTAAACCCA+TGG | - | chr4.2:13982699-13982718 | None:intergenic | 40.0% | |
TTGTAACTGAGGACTCGATT+TGG | + | chr4.2:13984134-13984153 | MS.gene023432:intron | 40.0% | |
TTTCCGTTACCCCATTTGAT+CGG | - | chr4.2:13982837-13982856 | None:intergenic | 40.0% | |
! | ACACCTTCAATCAGAAGTGT+CGG | + | chr4.2:13982535-13982554 | MS.gene023432:intron | 40.0% |
! | ATGGGACCTTTCTTTGGAAA+AGG | + | chr4.2:13986552-13986571 | MS.gene023432:CDS | 40.0% |
! | CCAGGTATAATTTTTGCCCT+TGG | + | chr4.2:13984587-13984606 | MS.gene023432:intron | 40.0% |
! | CGATATTTTACGTGACACCA+TGG | + | chr4.2:13982679-13982698 | MS.gene023432:CDS | 40.0% |
! | GTCGGTATTTAGAGTTCAAG+AGG | + | chr4.2:13982553-13982572 | MS.gene023432:intron | 40.0% |
! | TAGGTTGGCTAGTTGTATGT+TGG | + | chr4.2:13985673-13985692 | MS.gene023432:intron | 40.0% |
! | TATATGGGGATTTTGTGCCA+TGG | - | chr4.2:13983461-13983480 | None:intergenic | 40.0% |
!! | ACTGATGACTCTGAAATGGA+TGG | + | chr4.2:13983221-13983240 | MS.gene023432:CDS | 40.0% |
!! | AGGAGCGTTTACTTGTTCTT+GGG | - | chr4.2:13986611-13986630 | None:intergenic | 40.0% |
!! | AGTTGAAGGGTGCCAAATAA+TGG | - | chr4.2:13983708-13983727 | None:intergenic | 40.0% |
!! | ATATTGGATGGCCTTGTCTT+AGG | + | chr4.2:13982103-13982122 | MS.gene023432:CDS | 40.0% |
!! | CTTTGGGTTTTACCCTTTCA+TGG | + | chr4.2:13986436-13986455 | MS.gene023432:intron | 40.0% |
!! | GTTCCGAAAAAGGTATTGCT+TGG | - | chr4.2:13985342-13985361 | None:intergenic | 40.0% |
AAGACCCCAAAGAACTGCAT+TGG | + | chr4.2:13987007-13987026 | MS.gene023432:CDS | 45.0% | |
AGTGAAGACGAAGAAGAAGG+TGG | + | chr4.2:13983269-13983288 | MS.gene023432:CDS | 45.0% | |
ATCAACTCCTTGGACACCTT+CGG | - | chr4.2:13985003-13985022 | None:intergenic | 45.0% | |
CAAGAAGATTTCTCAGCCTG+GGG | - | chr4.2:13983131-13983150 | None:intergenic | 45.0% | |
CACTAGCAGATAGCATCACA+AGG | - | chr4.2:13982966-13982985 | None:intergenic | 45.0% | |
CCAAGAAGATTTCTCAGCCT+GGG | - | chr4.2:13983132-13983151 | None:intergenic | 45.0% | |
CTCCACTCAATGGATGTGAT+TGG | - | chr4.2:13986267-13986286 | None:intergenic | 45.0% | |
CTGCCCAAGATGCACATATA+TGG | - | chr4.2:13983477-13983496 | None:intergenic | 45.0% | |
GCACTTGGGTGACATAGAAT+TGG | + | chr4.2:13982360-13982379 | MS.gene023432:intron | 45.0% | |
GCCCAAGATGCACATATATG+GGG | - | chr4.2:13983475-13983494 | None:intergenic | 45.0% | |
GGCTTGTATCCGGTAATCAT+TGG | + | chr4.2:13985102-13985121 | MS.gene023432:intron | 45.0% | |
GTGTGCCAATGCAGTTCTTT+GGG | - | chr4.2:13987015-13987034 | None:intergenic | 45.0% | |
GTTGTGGCTGAATAGCACAA+AGG | + | chr4.2:13983867-13983886 | MS.gene023432:intron | 45.0% | |
TAATATGTTGCATGTGCCCC+AGG | + | chr4.2:13983112-13983131 | MS.gene023432:intron | 45.0% | |
TACACCGACACAAGTGACTA+CGG | - | chr4.2:13982503-13982522 | None:intergenic | 45.0% | |
TAGTCACTTGGGTAGCACTT+GGG | + | chr4.2:13982346-13982365 | MS.gene023432:intron | 45.0% | |
TATTAACCGGATACGCTCCA+TGG | + | chr4.2:13983441-13983460 | MS.gene023432:CDS | 45.0% | |
TATTATCTCCCGACCTGTTG+TGG | - | chr4.2:13984508-13984527 | None:intergenic | 45.0% | |
TCCAAGAAGATTTCTCAGCC+TGG | - | chr4.2:13983133-13983152 | None:intergenic | 45.0% | |
TCCACACGAAGCTTCTTCAT+TGG | + | chr4.2:13986287-13986306 | MS.gene023432:CDS | 45.0% | |
TCGAGCCACTAATAGCATGT+AGG | - | chr4.2:13983752-13983771 | None:intergenic | 45.0% | |
TCGTCCAACAATTCTGTGGA+TGG | - | chr4.2:13986371-13986390 | None:intergenic | 45.0% | |
TCGTGATCTCAGACTGCTTA+AGG | + | chr4.2:13985727-13985746 | MS.gene023432:CDS | 45.0% | |
TCTGTTCACACCTACAGTTG+CGG | + | chr4.2:13983398-13983417 | MS.gene023432:intron | 45.0% | |
TCTTCCAACTTATCCACACC+AGG | - | chr4.2:13982030-13982049 | None:intergenic | 45.0% | |
TGAATAGGAAGGAGATTCCG+TGG | + | chr4.2:13986215-13986234 | MS.gene023432:intron | 45.0% | |
TGTGCCAATGCAGTTCTTTG+GGG | - | chr4.2:13987014-13987033 | None:intergenic | 45.0% | |
TGTGTGCCAATGCAGTTCTT+TGG | - | chr4.2:13987016-13987035 | None:intergenic | 45.0% | |
TGTTCAATGAACCCTTGCAG+TGG | + | chr4.2:13985429-13985448 | MS.gene023432:intron | 45.0% | |
TTCCATGTTGCAGCAGATGT+AGG | - | chr4.2:13985252-13985271 | None:intergenic | 45.0% | |
TTGGCTAAGGACCAGTCATA+GGG | - | chr4.2:13983531-13983550 | None:intergenic | 45.0% | |
TTTGCCCTTGGGTACAAATG+AGG | + | chr4.2:13984599-13984618 | MS.gene023432:intron | 45.0% | |
TTTGGAAAAGGACGAGGAAG+AGG | + | chr4.2:13986564-13986583 | MS.gene023432:CDS | 45.0% | |
! | CCGCCAAGCAATACCTTTTT+CGG | + | chr4.2:13985336-13985355 | MS.gene023432:intron | 45.0% |
! | CCTCGTCCTTTTCCAAAGAA+AGG | - | chr4.2:13986561-13986580 | None:intergenic | 45.0% |
! | CCTTTCTTTGGAAAAGGACG+AGG | + | chr4.2:13986558-13986577 | MS.gene023432:CDS | 45.0% |
! | TATTTCTGCGGTTCCACAAC+AGG | + | chr4.2:13984492-13984511 | MS.gene023432:intron | 45.0% |
! | TGTTGGTAGGTTCACAAGTC+AGG | - | chr4.2:13984459-13984478 | None:intergenic | 45.0% |
!! | CAGGAGCGTTTACTTGTTCT+TGG | - | chr4.2:13986612-13986631 | None:intergenic | 45.0% |
!! | CCGAAAAAGGTATTGCTTGG+CGG | - | chr4.2:13985339-13985358 | None:intergenic | 45.0% |
!! | TGACTCTGAAATGGATGGTG+AGG | + | chr4.2:13983226-13983245 | MS.gene023432:CDS | 45.0% |
!! | TGCGTCTTTTCAAGCACACA+AGG | + | chr4.2:13985538-13985557 | MS.gene023432:CDS | 45.0% |
!! | TGTTTTTGCTTCTTGCTCCG+TGG | + | chr4.2:13985469-13985488 | MS.gene023432:CDS | 45.0% |
ACACCGACACAAGTGACTAC+GGG | - | chr4.2:13982502-13982521 | None:intergenic | 50.0% | |
ACGGAGTGAATCATCTTCGG+CGG | + | chr4.2:13981969-13981988 | MS.gene023432:CDS | 50.0% | |
ACTGGAGTCCTCTTGTTCCA+GGG | + | chr4.2:13985078-13985097 | MS.gene023432:CDS | 50.0% | |
AGCCTACATCTGCTGCAACA+TGG | + | chr4.2:13985247-13985266 | MS.gene023432:CDS | 50.0% | |
AGCGGCAGCTAAGGTTGTTA+AGG | + | chr4.2:13984815-13984834 | MS.gene023432:intron | 50.0% | |
AGGTTCACAAGTCAGGTCGT+GGG | - | chr4.2:13984452-13984471 | None:intergenic | 50.0% | |
CACAGGTTCCGGTAAAAGTG+TGG | + | chr4.2:13982001-13982020 | MS.gene023432:CDS | 50.0% | |
CATTGGCACACACAGATTCC+TGG | + | chr4.2:13987024-13987043 | MS.gene023432:CDS | 50.0% | |
CCCAGGCTGAGAAATCTTCT+TGG | + | chr4.2:13983129-13983148 | MS.gene023432:intron | 50.0% | |
CCTGAACTGCATCAACTCCT+TGG | - | chr4.2:13985013-13985032 | None:intergenic | 50.0% | |
CTACCCGTAGTCACTTGTGT+CGG | + | chr4.2:13982496-13982515 | MS.gene023432:intron | 50.0% | |
CTAGCAGAGACAGAAACCGA+AGG | + | chr4.2:13984984-13985003 | MS.gene023432:CDS | 50.0% | |
CTTGGCTAAGGACCAGTCAT+AGG | - | chr4.2:13983532-13983551 | None:intergenic | 50.0% | |
GAGTTACCTTCCGCAACTGT+AGG | - | chr4.2:13983411-13983430 | None:intergenic | 50.0% | |
GCAACCTGGTGTGGATAAGT+TGG | + | chr4.2:13982023-13982042 | MS.gene023432:CDS | 50.0% | |
GCCAATGAAGAAGCTTCGTG+TGG | - | chr4.2:13986291-13986310 | None:intergenic | 50.0% | |
GCCGATCACAATGTCACAAG+CGG | + | chr4.2:13982400-13982419 | MS.gene023432:intron | 50.0% | |
GCCGCTTGTGACATTGTGAT+CGG | - | chr4.2:13982404-13982423 | None:intergenic | 50.0% | |
GCGGCAGCTAAGGTTGTTAA+GGG | + | chr4.2:13984816-13984835 | MS.gene023432:intron | 50.0% | |
GCTAGTTGTATGTTGGCGTC+GGG | + | chr4.2:13985680-13985699 | MS.gene023432:CDS | 50.0% | |
GGTCCCATATTCTGTGGCAA+AGG | - | chr4.2:13986540-13986559 | None:intergenic | 50.0% | |
GTAGTCACTTGGGTAGCACT+TGG | + | chr4.2:13982345-13982364 | MS.gene023432:intron | 50.0% | |
TACCTGCAAAGTAGGACCAC+CGG | - | chr4.2:13983297-13983316 | None:intergenic | 50.0% | |
TAGGTTCACAAGTCAGGTCG+TGG | - | chr4.2:13984453-13984472 | None:intergenic | 50.0% | |
TATGGGATACTCGTTTGGGG+AGG | + | chr4.2:13985507-13985526 | MS.gene023432:CDS | 50.0% | |
TCATGCAGCTTCTGATGGCA+AGG | - | chr4.2:13987112-13987131 | None:intergenic | 50.0% | |
TGTGCATCTTGGGCAGAATC+TGG | + | chr4.2:13983481-13983500 | MS.gene023432:CDS | 50.0% | |
TGTGCTTGAAAAGACGCAGC+TGG | - | chr4.2:13985536-13985555 | None:intergenic | 50.0% | |
TTCACACCTACAGTTGCGGA+AGG | + | chr4.2:13983402-13983421 | MS.gene023432:intron | 50.0% | |
TTCGTGTGGACTCCACTCAA+TGG | - | chr4.2:13986277-13986296 | None:intergenic | 50.0% | |
TTGCGGAAGGTAACTCACGA+AGG | + | chr4.2:13983415-13983434 | MS.gene023432:CDS | 50.0% | |
TTTGTGCCATGGAGCGTATC+CGG | - | chr4.2:13983450-13983469 | None:intergenic | 50.0% | |
! | AAAAGTGTGGCAACCTGGTG+TGG | + | chr4.2:13982014-13982033 | MS.gene023432:CDS | 50.0% |
! | AAATCTGGGACATCAGCCCA+TGG | - | chr4.2:13983988-13984007 | None:intergenic | 50.0% |
! | CACACTTTTACCGGAACCTG+TGG | - | chr4.2:13982003-13982022 | None:intergenic | 50.0% |
! | CCAGGTTGCCACACTTTTAC+CGG | - | chr4.2:13982012-13982031 | None:intergenic | 50.0% |
! | CTTGTGTCGGTGTAGTACAC+TGG | + | chr4.2:13982509-13982528 | MS.gene023432:intron | 50.0% |
! | GGCTAGTTGTATGTTGGCGT+CGG | + | chr4.2:13985679-13985698 | MS.gene023432:CDS | 50.0% |
! | TGGTGAGGATAGTGATAGCG+AGG | + | chr4.2:13983241-13983260 | MS.gene023432:CDS | 50.0% |
!! | ACAGAAACCGAAGGTGTCCA+AGG | + | chr4.2:13984993-13985012 | MS.gene023432:CDS | 50.0% |
!! | CCAAGGAGTTGATGCAGTTC+AGG | + | chr4.2:13985010-13985029 | MS.gene023432:CDS | 50.0% |
!! | CTAGCTCTGAACTTTGTCGG+AGG | - | chr4.2:13984531-13984550 | None:intergenic | 50.0% |
!! | GAGGGTGTTACCTGCAAAGT+AGG | - | chr4.2:13983305-13983324 | None:intergenic | 50.0% |
ACAAGCCTCCCTGGAACAAG+AGG | - | chr4.2:13985089-13985108 | None:intergenic | 55.0% | |
AGTTGGGGAGGCAGATCTTC+AGG | - | chr4.2:13986631-13986650 | None:intergenic | 55.0% | |
GACGAAGAAGAAGGTGGTGC+CGG | + | chr4.2:13983275-13983294 | MS.gene023432:CDS | 55.0% | |
GACTGGAGTCCTCTTGTTCC+AGG | + | chr4.2:13985077-13985096 | MS.gene023432:CDS | 55.0% | |
GAGTGAATCATCTTCGGCGG+CGG | + | chr4.2:13981972-13981991 | MS.gene023432:CDS | 55.0% | |
GGAAAAGGACGAGGAAGAGG+AGG | + | chr4.2:13986567-13986586 | MS.gene023432:CDS | 55.0% | |
GGCAGAATCTGGTCATGTGC+AGG | + | chr4.2:13983492-13983511 | MS.gene023432:CDS | 55.0% | |
GTTCCAGGGAGGCTTGTATC+CGG | + | chr4.2:13985092-13985111 | MS.gene023432:CDS | 55.0% | |
TCTGCGGTTCCACAACAGGT+CGG | + | chr4.2:13984496-13984515 | MS.gene023432:intron | 55.0% | |
TCTGTAGGGCTCCACTGCAA+GGG | - | chr4.2:13985443-13985462 | None:intergenic | 55.0% | |
TTACCGGATACAAGCCTCCC+TGG | - | chr4.2:13985098-13985117 | None:intergenic | 55.0% | |
TTCTGTAGGGCTCCACTGCA+AGG | - | chr4.2:13985444-13985463 | None:intergenic | 55.0% | |
! | CCGGTAAAAGTGTGGCAACC+TGG | + | chr4.2:13982009-13982028 | MS.gene023432:CDS | 55.0% |
! | TGGCGTCGGGTAGTGATGAT+GGG | + | chr4.2:13985693-13985712 | MS.gene023432:CDS | 55.0% |
! | TTCTGGGAAGAGACGTGAGC+TGG | + | chr4.2:13983184-13983203 | MS.gene023432:CDS | 55.0% |
! | TTGGCGTCGGGTAGTGATGA+TGG | + | chr4.2:13985692-13985711 | MS.gene023432:CDS | 55.0% |
CTGCGGTTCCACAACAGGTC+GGG | + | chr4.2:13984497-13984516 | MS.gene023432:intron | 60.0% | |
GGAGTCCTCTTGTTCCAGGG+AGG | + | chr4.2:13985081-13985100 | MS.gene023432:CDS | 60.0% | |
TGAATCATCTTCGGCGGCGG+CGG | + | chr4.2:13981975-13981994 | MS.gene023432:CDS | 60.0% | |
TGCCGGTGGTCCTACTTTGC+AGG | + | chr4.2:13983292-13983311 | MS.gene023432:CDS | 60.0% | |
! | GAAGAAGAAGGTGGTGCCGG+TGG | + | chr4.2:13983278-13983297 | MS.gene023432:CDS | 60.0% |
! | GGCGGCGGCGCCACAGGTTC+CGG | + | chr4.2:13981990-13982009 | MS.gene023432:CDS | 80.0% |
! | TTCGGCGGCGGCGGCGCCAC+AGG | + | chr4.2:13981984-13982003 | MS.gene023432:CDS | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 13981811 | 13987131 | 13981811 | ID=MS.gene023432 |
chr4.2 | mRNA | 13981811 | 13987131 | 13981811 | ID=MS.gene023432.t1;Parent=MS.gene023432 |
chr4.2 | exon | 13981811 | 13981858 | 13981811 | ID=MS.gene023432.t1.exon1;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13981811 | 13981858 | 13981811 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13981967 | 13982124 | 13981967 | ID=MS.gene023432.t1.exon2;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13981967 | 13982124 | 13981967 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13982676 | 13982754 | 13982676 | ID=MS.gene023432.t1.exon3;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13982676 | 13982754 | 13982676 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13983134 | 13983313 | 13983134 | ID=MS.gene023432.t1.exon4;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13983134 | 13983313 | 13983134 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13983415 | 13983513 | 13983415 | ID=MS.gene023432.t1.exon5;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13983415 | 13983513 | 13983415 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13984954 | 13985113 | 13984954 | ID=MS.gene023432.t1.exon6;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13984954 | 13985113 | 13984954 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13985217 | 13985323 | 13985217 | ID=MS.gene023432.t1.exon7;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13985217 | 13985323 | 13985217 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13985449 | 13985588 | 13985449 | ID=MS.gene023432.t1.exon8;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13985449 | 13985588 | 13985449 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13985676 | 13985748 | 13985676 | ID=MS.gene023432.t1.exon9;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13985676 | 13985748 | 13985676 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13986222 | 13986337 | 13986222 | ID=MS.gene023432.t1.exon10;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13986222 | 13986337 | 13986222 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13986549 | 13986666 | 13986549 | ID=MS.gene023432.t1.exon11;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13986549 | 13986666 | 13986549 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
chr4.2 | exon | 13987000 | 13987131 | 13987000 | ID=MS.gene023432.t1.exon12;Parent=MS.gene023432.t1 |
chr4.2 | CDS | 13987000 | 13987131 | 13987000 | ID=cds.MS.gene023432.t1;Parent=MS.gene023432.t1 |
Gene Sequence |
Protein sequence |