AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene023475

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023475.t1 MTR_8g083220 97.695 781 17 1 1 781 2 781 0.0 1572
MS.gene023475.t1 MTR_8g072440 44.459 740 391 11 39 775 31 753 0.0 598
MS.gene023475.t1 MTR_5g025010 43.876 743 394 13 39 775 25 750 0.0 587
MS.gene023475.t1 MTR_8g072440 44.789 710 373 10 68 775 19 711 0.0 579
MS.gene023475.t1 MTR_5g025010 44.244 721 380 12 60 775 15 718 0.0 579
MS.gene023475.t1 MTR_4g053630 42.049 742 410 11 43 777 4 732 0.0 554
MS.gene023475.t1 MTR_8g042710 42.651 762 399 18 36 775 19 764 0.0 549
MS.gene023475.t1 MTR_8g042670 43.119 763 365 19 43 775 35 758 0.0 549
MS.gene023475.t1 MTR_3g082200 41.505 771 400 20 35 777 25 772 0.0 545
MS.gene023475.t1 MTR_7g098630 41.992 743 375 16 60 774 46 760 0.0 543
MS.gene023475.t1 MTR_7g098070 40.548 767 411 19 37 778 19 765 0.0 537
MS.gene023475.t1 MTR_4g103400 41.466 791 398 22 23 774 12 776 3.33e-180 536
MS.gene023475.t1 MTR_4g134320 39.848 788 419 21 21 778 7 769 6.61e-180 535
MS.gene023475.t1 MTR_5g096750 42.243 767 375 22 43 775 33 765 6.76e-178 529
MS.gene023475.t1 MTR_4g103490 40.956 774 394 21 43 775 33 784 3.18e-177 528
MS.gene023475.t1 MTR_3g104930 43.046 755 378 17 42 774 37 761 9.85e-177 526
MS.gene023475.t1 MTR_4g103430 41.430 741 392 18 56 774 48 768 1.16e-176 526
MS.gene023475.t1 MTR_4g103450 41.022 763 399 19 43 775 3 744 5.16e-175 521
MS.gene023475.t1 MTR_4g103480 40.736 761 404 18 43 775 46 787 6.73e-175 522
MS.gene023475.t1 MTR_4g073540 42.779 727 376 19 77 778 60 771 1.55e-173 518
MS.gene023475.t1 MTR_4g095360 40.263 760 394 20 41 774 29 754 4.43e-173 516
MS.gene023475.t1 MTR_3g114420 41.252 783 408 20 22 777 10 767 1.76e-172 515
MS.gene023475.t1 MTR_3g061110 38.314 783 422 19 21 775 4 753 1.01e-170 510
MS.gene023475.t1 MTR_3g102810 40.181 774 417 17 22 773 4 753 3.29e-169 506
MS.gene023475.t1 MTR_7g075900 41.994 712 376 14 80 774 80 771 1.31e-168 506
MS.gene023475.t1 MTR_8g022870 40.233 773 392 18 50 778 33 779 6.81e-168 504
MS.gene023475.t1 MTR_4g103495 41.725 719 374 17 37 728 24 724 1.03e-167 503
MS.gene023475.t1 MTR_4g053635 41.618 692 381 12 95 779 2 677 1.69e-167 499
MS.gene023475.t1 MTR_2g018135 40.589 781 399 19 38 774 23 782 3.21e-167 502
MS.gene023475.t1 MTR_4g053630 42.365 668 365 11 117 777 1 655 1.36e-166 496
MS.gene023475.t1 MTR_1g018510 40.457 744 397 13 55 773 2 724 2.07e-166 498
MS.gene023475.t1 MTR_0047s0120 40.716 754 406 18 37 773 26 755 1.20e-165 498
MS.gene023475.t1 MTR_2g018125 40.333 781 399 19 39 774 25 783 2.07e-165 498
MS.gene023475.t1 MTR_4g071560 49.649 570 219 9 47 597 1 521 5.26e-165 488
MS.gene023475.t1 MTR_7g081750 38.706 788 407 19 43 775 32 798 3.11e-164 495
MS.gene023475.t1 MTR_2g042130 39.344 793 414 20 20 773 7 771 7.70e-164 493
MS.gene023475.t1 MTR_8g006680 40.106 753 383 21 37 777 29 725 2.61e-163 490
MS.gene023475.t1 MTR_8g005300 40.106 753 383 21 37 777 29 725 2.61e-163 490
MS.gene023475.t1 MTR_8g005640 40.106 753 383 21 37 777 29 725 2.61e-163 490
MS.gene023475.t1 MTR_1g102350 38.938 791 435 19 13 774 5 776 2.47e-162 489
MS.gene023475.t1 MTR_8g042670 44.306 641 314 16 151 775 21 634 6.77e-162 484
MS.gene023475.t1 MTR_5g016120 39.920 754 413 15 37 772 27 758 8.37e-162 488
MS.gene023475.t1 MTR_3g082200 41.945 658 346 16 136 777 12 649 8.69e-161 481
MS.gene023475.t1 MTR_6g055570 39.205 755 394 18 36 777 30 732 7.85e-159 479
MS.gene023475.t1 MTR_3g010080 38.432 778 409 18 22 779 9 736 1.45e-158 478
MS.gene023475.t1 MTR_7g081580 39.820 776 408 25 39 775 29 784 2.03e-158 480
MS.gene023475.t1 MTR_8g021130 40.824 752 383 20 57 775 53 775 5.39e-158 479
MS.gene023475.t1 MTR_1g048110 39.234 757 392 17 36 777 30 733 6.39e-158 477
MS.gene023475.t1 MTR_1g006990 39.159 761 395 20 36 779 30 739 8.83e-158 476
MS.gene023475.t1 MTR_7g081420 39.440 786 398 23 39 775 29 785 1.35e-157 478
MS.gene023475.t1 MTR_7g034380 39.506 729 375 14 62 775 15 692 7.00e-157 473
MS.gene023475.t1 MTR_7g075890 38.502 761 393 19 38 774 188 897 7.34e-157 479
MS.gene023475.t1 MTR_8g033150 39.418 756 394 16 38 774 41 751 1.51e-156 474
MS.gene023475.t1 MTR_5g011190 39.974 773 418 15 17 774 12 753 2.07e-156 474
MS.gene023475.t1 MTR_3g464790 41.389 749 381 18 37 774 30 731 2.22e-156 473
MS.gene023475.t1 MTR_8g033150 39.547 751 390 16 43 774 19 724 2.40e-156 473
MS.gene023475.t1 MTR_3g082200 42.386 637 331 17 157 777 18 634 2.43e-155 467
MS.gene023475.t1 MTR_7g481600 38.839 775 417 22 39 775 29 784 8.76e-154 469
MS.gene023475.t1 MTR_6g055410 38.360 756 381 20 36 777 30 714 2.40e-153 464
MS.gene023475.t1 MTR_5g011370 39.586 773 421 15 17 774 32 773 2.63e-153 466
MS.gene023475.t1 MTR_7g081500 38.166 807 418 24 17 775 10 783 3.45e-153 466
MS.gene023475.t1 MTR_1g079120 37.230 787 431 22 22 779 13 765 3.00e-152 463
MS.gene023475.t1 MTR_1g007030 37.698 756 409 17 37 779 31 737 5.08e-152 461
MS.gene023475.t1 MTR_4g125180 39.221 770 420 19 22 773 11 750 6.84e-152 462
MS.gene023475.t1 MTR_4g103495 42.746 641 326 17 157 775 3 624 4.70e-151 455
MS.gene023475.t1 MTR_8g079900 38.543 755 401 17 38 774 32 741 1.41e-150 458
MS.gene023475.t1 MTR_5g011310 39.018 774 424 16 17 774 12 753 1.91e-150 458
MS.gene023475.t1 MTR_4g102400 39.309 753 404 19 39 774 36 752 4.71e-150 457
MS.gene023475.t1 MTR_5g085690 38.653 802 421 24 23 774 8 788 4.96e-150 458
MS.gene023475.t1 MTR_7g079310 36.755 789 431 21 21 774 8 763 7.60e-150 457
MS.gene023475.t1 MTR_5g011320 39.811 741 403 14 42 774 40 745 1.29e-149 456
MS.gene023475.t1 MTR_7g104200 39.211 760 393 21 43 779 33 746 5.63e-149 454
MS.gene023475.t1 MTR_5g011260 37.664 762 421 18 26 774 31 751 4.24e-148 452
MS.gene023475.t1 MTR_7g081380 38.161 794 419 21 39 775 29 807 3.17e-147 451
MS.gene023475.t1 MTR_5g055920 40.862 673 344 18 125 775 27 667 1.93e-146 445
MS.gene023475.t1 MTR_8g005710 37.954 743 379 20 61 777 15 701 2.14e-146 446
MS.gene023475.t1 MTR_7g079300 37.387 773 412 23 40 774 27 765 6.00e-146 447
MS.gene023475.t1 MTR_8g024380 39.864 735 370 19 66 774 70 758 8.55e-146 446
MS.gene023475.t1 MTR_5g011340 39.065 727 401 12 56 774 58 750 1.11e-145 446
MS.gene023475.t1 MTR_1g078110 38.019 747 401 17 61 781 50 760 4.47e-145 444
MS.gene023475.t1 MTR_8g024390 40.358 726 375 20 80 780 71 763 5.45e-145 444
MS.gene023475.t1 MTR_5g011270 38.362 769 417 18 26 781 31 755 1.01e-144 443
MS.gene023475.t1 MTR_8g024420 39.669 726 378 21 80 780 37 727 3.24e-144 441
MS.gene023475.t1 MTR_5g011280 38.114 753 413 18 37 774 41 755 6.00e-143 439
MS.gene023475.t1 MTR_3g114410 44.957 585 263 14 36 595 30 580 8.82e-143 432
MS.gene023475.t1 MTR_8g079900 39.562 685 352 16 108 774 3 643 1.70e-138 424
MS.gene023475.t1 MTR_8g042710 43.396 583 298 15 35 598 18 587 1.29e-137 422
MS.gene023475.t1 MTR_2g044630 36.340 754 387 20 37 775 31 706 4.96e-136 419
MS.gene023475.t1 MTR_7g118080 37.136 789 428 21 24 780 9 761 5.23e-136 421
MS.gene023475.t1 MTR_8g024370 36.776 794 424 20 23 779 9 761 1.20e-133 415
MS.gene023475.t1 MTR_2g049200 38.409 729 383 19 80 780 71 761 1.20e-129 404
MS.gene023475.t1 MTR_6g075370 35.541 740 359 17 43 763 35 675 4.99e-125 390
MS.gene023475.t1 MTR_2g042640 37.693 711 312 23 36 733 15 607 9.50e-123 382
MS.gene023475.t1 MTR_3g452290 36.538 676 314 18 109 777 4 571 1.89e-114 358
MS.gene023475.t1 MTR_3g451220 36.538 676 314 18 109 777 4 571 1.89e-114 358
MS.gene023475.t1 MTR_2g042650 33.113 758 351 22 37 779 31 647 1.25e-101 327
MS.gene023475.t1 MTR_4g127480 33.464 768 436 27 59 775 71 814 2.29e-94 313
MS.gene023475.t1 MTR_2g037850 33.290 778 445 29 49 772 54 811 3.49e-92 307
MS.gene023475.t1 MTR_4g132620 33.036 784 457 27 37 774 53 814 1.63e-89 300
MS.gene023475.t1 MTR_2g046740 31.421 767 454 24 60 774 92 838 8.44e-87 293
MS.gene023475.t1 MTR_8g089230 31.225 743 447 24 81 774 118 845 1.18e-76 265
MS.gene023475.t1 MTR_8g027260 42.818 369 174 9 16 380 8 343 1.53e-76 261
MS.gene023475.t1 MTR_8g027260 38.889 306 158 6 487 777 363 654 2.30e-55 202
MS.gene023475.t1 MTR_5g081100 36.789 492 239 14 43 531 4 426 2.56e-74 248
MS.gene023475.t1 MTR_7g079295 42.017 357 170 12 40 378 27 364 8.39e-69 236
MS.gene023475.t1 MTR_7g079295 35.099 151 87 5 631 774 363 509 1.74e-14 77.4
MS.gene023475.t1 MTR_3g114160 37.374 396 174 9 77 463 4 334 5.55e-64 218
MS.gene023475.t1 MTR_5g081280 37.309 327 152 10 43 368 23 297 6.75e-58 199
MS.gene023475.t1 MTR_2g070250 32.877 365 190 9 163 527 97 406 9.11e-46 169
MS.gene023475.t1 MTR_8g092940 44.541 229 98 9 79 306 27 227 4.69e-43 156
MS.gene023475.t1 MTR_3g114140 39.847 261 137 8 489 735 169 423 3.23e-41 157
MS.gene023475.t1 MTR_3g114140 44.720 161 59 2 225 385 28 158 9.81e-26 111
MS.gene023475.t1 MTR_2g070260 38.725 204 113 4 564 764 1 195 7.08e-39 144
MS.gene023475.t1 MTR_4g053665 34.118 255 123 5 530 779 1 215 2.84e-34 130
MS.gene023475.t1 MTR_4g126230 33.858 254 145 7 461 703 7 248 1.23e-32 127
MS.gene023475.t1 MTR_5g079315 82.432 74 13 0 292 365 1 74 4.15e-32 119
MS.gene023475.t1 MTR_5g044060 47.794 136 64 2 499 627 1 136 3.19e-27 109
MS.gene023475.t1 MTR_5g081130 35.638 188 99 6 593 774 1 172 4.94e-22 95.1
MS.gene023475.t1 MTR_7g081660 34.118 170 107 4 608 775 387 553 4.14e-20 95.5
MS.gene023475.t1 MTR_1g050640 42.857 84 45 1 39 122 44 124 9.27e-16 75.1
MS.gene023475.t1 MTR_3g114400 33.735 166 87 6 616 774 13 162 1.31e-15 75.5
MS.gene023475.t1 MTR_5g011300 40.625 96 55 1 564 659 1 94 6.47e-15 71.6
MS.gene023475.t1 MTR_8g027660 28.643 199 110 6 588 780 80 252 7.38e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023475.t1 AT1G32960 51.471 748 350 9 36 776 26 767 0.0 755
MS.gene023475.t1 AT4G10550 50.131 764 366 10 22 776 11 768 0.0 746
MS.gene023475.t1 AT4G10550 50.264 758 362 10 28 776 33 784 0.0 743
MS.gene023475.t1 AT4G10540 49.799 747 364 8 36 776 24 765 0.0 741
MS.gene023475.t1 AT4G10520 49.670 757 358 10 23 776 10 746 0.0 739
MS.gene023475.t1 AT1G32940 51.337 748 351 9 36 776 23 764 0.0 735
MS.gene023475.t1 AT1G32950 50.130 768 363 10 19 776 6 763 0.0 727
MS.gene023475.t1 AT4G10510 49.040 781 380 13 9 781 2 772 0.0 725
MS.gene023475.t1 AT4G10510 49.866 746 361 10 42 781 22 760 0.0 723
MS.gene023475.t1 AT4G10550 50.557 718 343 9 65 776 1 712 0.0 711
MS.gene023475.t1 AT4G10550 50.557 718 343 9 65 776 1 712 0.0 711
MS.gene023475.t1 AT4G10530 47.582 765 367 12 18 776 1 737 0.0 704
MS.gene023475.t1 AT4G21650 50.526 760 323 12 37 776 36 762 0.0 703
MS.gene023475.t1 AT1G32940 51.460 719 336 9 65 776 1 713 0.0 702
MS.gene023475.t1 AT1G32940 51.460 719 336 9 65 776 1 713 0.0 702
MS.gene023475.t1 AT4G10510 49.793 723 350 10 65 781 1 716 0.0 695
MS.gene023475.t1 AT1G32950 51.108 722 333 10 65 776 1 712 0.0 694
MS.gene023475.t1 AT4G21630 48.601 786 355 14 8 776 2 755 0.0 683
MS.gene023475.t1 AT5G11940 45.822 766 394 5 18 781 13 759 0.0 677
MS.gene023475.t1 AT4G10510 49.294 708 346 10 80 781 1 701 0.0 676
MS.gene023475.t1 AT1G66220 46.615 768 376 12 16 776 6 746 0.0 670
MS.gene023475.t1 AT4G21640 46.242 785 340 12 11 776 8 729 0.0 646
MS.gene023475.t1 AT1G66210 45.455 748 382 10 36 781 34 757 0.0 637
MS.gene023475.t1 AT4G21323 44.355 744 377 15 42 776 80 795 0.0 596
MS.gene023475.t1 AT1G32970 43.848 764 384 13 18 776 1 724 0.0 592
MS.gene023475.t1 AT1G32940 52.548 569 258 8 36 597 23 586 0.0 569
MS.gene023475.t1 AT2G04160 42.373 767 401 17 33 775 22 771 0.0 560
MS.gene023475.t1 AT1G04110 43.119 763 373 19 50 774 31 770 0.0 550
MS.gene023475.t1 AT4G21326 42.697 712 383 6 65 775 1 688 0.0 544
MS.gene023475.t1 AT1G20160 41.419 775 406 19 23 776 16 763 0.0 539
MS.gene023475.t1 AT4G26330 43.172 725 374 17 72 774 13 721 0.0 537
MS.gene023475.t1 AT1G20160 43.194 720 367 17 78 776 26 724 0.0 536
MS.gene023475.t1 AT4G26330 42.355 739 374 18 72 774 13 735 3.65e-177 527
MS.gene023475.t1 AT5G59810 40.415 772 409 17 29 775 30 775 5.63e-176 525
MS.gene023475.t1 AT4G34980 43.191 727 372 18 72 774 49 758 2.27e-175 523
MS.gene023475.t1 AT5G67360 40.832 769 407 19 28 774 12 754 9.72e-175 521
MS.gene023475.t1 AT1G20150 41.276 768 385 19 43 774 33 770 2.16e-173 518
MS.gene023475.t1 AT5G45650 40.990 788 393 22 38 774 22 788 2.97e-171 513
MS.gene023475.t1 AT5G45650 40.990 788 393 22 38 774 22 788 2.97e-171 513
MS.gene023475.t1 AT3G14067 41.813 739 384 18 61 775 52 768 5.13e-169 507
MS.gene023475.t1 AT3G14240 40.921 738 373 18 79 778 61 773 5.88e-166 499
MS.gene023475.t1 AT2G05920 41.248 737 386 18 62 779 46 754 2.34e-161 486
MS.gene023475.t1 AT5G51750 40.499 721 392 15 73 774 72 774 2.68e-158 479
MS.gene023475.t1 AT5G59090 39.229 752 388 16 37 774 27 723 1.98e-155 470
MS.gene023475.t1 AT5G59090 39.442 753 390 17 37 774 27 728 3.06e-155 470
MS.gene023475.t1 AT5G59090 39.442 753 388 18 37 774 27 726 1.49e-153 466
MS.gene023475.t1 AT4G00230 40.027 752 397 17 37 774 32 743 1.50e-152 463
MS.gene023475.t1 AT5G59130 37.323 777 405 22 22 779 17 730 2.37e-150 457
MS.gene023475.t1 AT5G59120 38.970 757 396 18 38 779 27 732 9.24e-150 456
MS.gene023475.t1 AT5G59130 37.323 777 401 23 22 779 17 726 7.71e-149 453
MS.gene023475.t1 AT3G46850 39.314 758 389 24 37 774 28 734 1.12e-147 450
MS.gene023475.t1 AT5G03620 38.089 785 414 22 23 772 9 756 1.15e-147 451
MS.gene023475.t1 AT5G59130 37.720 737 380 20 62 779 15 691 3.07e-147 448
MS.gene023475.t1 AT5G59190 38.745 733 380 17 61 778 14 692 3.64e-147 447
MS.gene023475.t1 AT1G01900 40.476 714 381 18 82 774 81 771 9.68e-147 449
MS.gene023475.t1 AT5G58840 38.182 770 384 21 24 776 14 708 1.02e-146 447
MS.gene023475.t1 AT5G59130 37.404 778 393 23 22 779 17 720 1.23e-146 447
MS.gene023475.t1 AT3G46840 38.573 757 395 20 37 774 29 734 1.68e-145 445
MS.gene023475.t1 AT5G58830 37.227 779 397 19 12 774 3 705 3.03e-145 443
MS.gene023475.t1 AT5G59100 38.881 751 394 21 42 774 34 737 9.01e-145 443
MS.gene023475.t1 AT5G58820 38.947 760 361 24 38 776 25 702 1.56e-138 426
MS.gene023475.t1 AT4G15040 38.005 742 384 21 50 776 7 687 1.15e-137 423
MS.gene023475.t1 AT4G15040 38.005 742 384 21 50 776 7 687 1.15e-137 423
MS.gene023475.t1 AT5G45640 38.005 742 381 23 89 777 39 754 8.41e-132 410
MS.gene023475.t1 AT5G67090 36.187 771 409 19 18 763 3 715 5.04e-127 397
MS.gene023475.t1 AT5G03620 40.404 594 310 14 23 597 9 577 3.20e-125 387
MS.gene023475.t1 AT4G00230 42.504 567 288 11 37 595 32 568 3.15e-123 382
MS.gene023475.t1 AT5G58840 39.353 587 280 17 24 599 14 535 1.62e-116 363
MS.gene023475.t1 AT1G20160 41.264 538 283 13 23 551 16 529 2.12e-115 360
MS.gene023475.t1 AT2G19170 33.025 757 442 24 63 772 70 808 6.54e-97 319
MS.gene023475.t1 AT2G19170 33.025 757 442 24 63 772 70 808 6.54e-97 319
MS.gene023475.t1 AT1G30600 33.290 769 437 24 60 774 80 826 1.71e-91 305
MS.gene023475.t1 AT2G39850 31.783 774 420 31 62 778 47 769 2.94e-91 303
MS.gene023475.t1 AT4G30020 33.160 769 426 25 63 772 70 809 1.52e-90 302
MS.gene023475.t1 AT4G30020 33.160 769 426 25 63 772 70 809 1.52e-90 302
MS.gene023475.t1 AT4G30020 33.160 769 426 25 63 772 70 809 1.52e-90 302
MS.gene023475.t1 AT4G30020 33.160 769 426 25 63 772 70 809 1.52e-90 302
MS.gene023475.t1 AT1G62340 32.732 776 443 25 59 777 79 832 3.10e-88 296
MS.gene023475.t1 AT5G58840 37.109 512 253 16 24 531 14 460 6.05e-87 283
MS.gene023475.t1 AT5G44530 31.333 750 437 24 81 774 106 833 5.72e-82 280
MS.gene023475.t1 AT4G20430 30.869 771 450 27 62 774 103 848 1.62e-81 279
MS.gene023475.t1 AT4G20430 30.869 771 450 27 62 774 103 848 1.62e-81 279
MS.gene023475.t1 AT4G20430 31.324 763 433 28 62 774 103 824 5.06e-80 274
MS.gene023475.t1 AT5G44530 30.323 775 437 25 81 774 106 858 1.06e-76 266
MS.gene023475.t1 AT1G32980 48.677 189 96 1 560 748 3 190 2.34e-53 183
MS.gene023475.t1 AT5G44530 31.765 510 285 18 81 545 106 597 6.98e-49 183
MS.gene023475.t1 AT5G59110 33.962 159 99 2 622 774 8 166 6.67e-22 94.0
MS.gene023475.t1 AT1G71950 43.902 82 43 1 40 121 47 125 1.86e-15 74.3

Find 174 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTTCAGCTGGAAATTC+TGG 0.217907 4.3:-15682112 MS.gene023475:CDS
CAAAGACTGTTATAGGAAAA+TGG 0.220891 4.3:-15681004 MS.gene023475:CDS
TGGAACCTTCTTCTGATATA+AGG 0.236585 4.3:+15679730 None:intergenic
AGCACCCGGTGTGGACATTT+TGG 0.276373 4.3:-15680346 MS.gene023475:CDS
TTCGAAACGGTTTGAGAAAT+AGG 0.281095 4.3:+15682088 None:intergenic
TCACCTTGCTCTTCTAATAT+AGG 0.283071 4.3:+15681141 None:intergenic
CTTCAGGTTTGGAATTGATA+TGG 0.287368 4.3:+15679491 None:intergenic
AATTATAGAGGCCTTGCTTC+TGG 0.298733 4.3:-15682373 MS.gene023475:CDS
AGAAGAAGGTTCCACAAATA+AGG 0.303939 4.3:-15679721 MS.gene023475:CDS
TTGCATGGTGATTACAGATT+TGG 0.307057 4.3:-15679294 MS.gene023475:CDS
CTAGAAGTTGGGACTTCATT+GGG 0.311848 4.3:-15683247 MS.gene023475:CDS
CTTGATTTCTTGAAGGCATT+TGG 0.311910 4.3:-15682663 MS.gene023475:intron
CCTGCATTGATTGCTTTGTT+AGG 0.315288 4.3:+15679660 None:intergenic
GTTGCAACTTGTAGTGGTTT+TGG 0.315811 4.3:+15679554 None:intergenic
GATCTTCTTGTTACAGTTTG+TGG 0.325361 4.3:+15682552 None:intergenic
AGTGGATTCATATTCTTATC+TGG 0.334970 4.3:-15680291 MS.gene023475:CDS
TTACTGTTGTATGACTCTTC+AGG 0.345235 4.3:+15679475 None:intergenic
GCTATAGTGAATAGTCCTTA+TGG 0.348636 4.3:-15679408 MS.gene023475:CDS
ATCACAGTTGTTTCTTCAGC+TGG 0.356297 4.3:-15682121 MS.gene023475:CDS
TGTTACCAAAGCTGATCTTA+TGG 0.357629 4.3:+15680191 None:intergenic
GATTGCCATCTGTCCATGTT+AGG 0.364733 4.3:+15679268 None:intergenic
CAAAATGTTATCTTCACTCT+TGG 0.369107 4.3:-15683602 MS.gene023475:CDS
GGTGCTAGATGGTTCCTAAA+AGG 0.369584 4.3:-15682526 MS.gene023475:CDS
GTTGTATGACTCTTCAGGTT+TGG 0.378921 4.3:+15679480 None:intergenic
TACTTGCTATATCTTCTGCT+TGG 0.382876 4.3:+15683406 None:intergenic
TGGAAATAACCTTACTTTGT+GGG 0.383187 4.3:-15681996 MS.gene023475:intron
TGGTATACTTCCGTGCATTA+AGG 0.383715 4.3:-15681194 MS.gene023475:CDS
TAGATGATGGAAACTAATTC+AGG 0.386421 4.3:-15683905 None:intergenic
ACTAGAAGTTGGGACTTCAT+TGG 0.388420 4.3:-15683248 MS.gene023475:CDS
GACCCATGGAACATAGGAAT+TGG 0.390726 4.3:+15679604 None:intergenic
GGCTATACCTTTAGCACAGT+TGG 0.393179 4.3:+15680930 None:intergenic
TGAAATGAAGCTTACGTTGA+AGG 0.396560 4.3:+15679326 None:intergenic
TGGCTATCTACAAAGCTTGC+TGG 0.398566 4.3:-15682318 MS.gene023475:CDS
GGTTTAATATTCAAATTGTA+TGG 0.400861 4.3:+15679215 None:intergenic
GCAGCAGACCCATTTGATAT+CGG 0.401613 4.3:-15679699 MS.gene023475:CDS
CAAACTCCTTTCCACTTGGA+TGG 0.402536 4.3:+15682598 None:intergenic
GATGTCTTAACTGTTTCTCT+TGG 0.405379 4.3:-15682223 MS.gene023475:CDS
TGAGGATACCAATAGCTGTT+AGG 0.408815 4.3:-15679239 MS.gene023475:CDS
TTAACTGTTTCTCTTGGCAT+TGG 0.414235 4.3:-15682217 MS.gene023475:CDS
ACTTGCTATATCTTCTGCTT+GGG 0.417096 4.3:+15683407 None:intergenic
TGAAGTAAGGATTGTCAGTC+TGG 0.419249 4.3:-15681370 MS.gene023475:intron
GATTCTTCTGCAAATATCTC+GGG 0.427428 4.3:+15683806 None:intergenic
TTGGAAATAACCTTACTTTG+TGG 0.427732 4.3:-15681997 MS.gene023475:CDS
GAATTGAAGTTCAAAATTTG+AGG 0.429380 4.3:+15679366 None:intergenic
TTAGGTCAAGGAACCATCAT+AGG 0.431578 4.3:-15683182 MS.gene023475:CDS
TGTATGGTCCTAACAGCTAT+TGG 0.434313 4.3:+15679231 None:intergenic
TTTCCAAGTGTAATGGCTGT+TGG 0.435517 4.3:+15682013 None:intergenic
AGAAACAACTGTGATACCTT+TGG 0.439366 4.3:+15682129 None:intergenic
AACACTCTCTTGGATTTGTC+GGG 0.440791 4.3:-15681880 MS.gene023475:CDS
AGGTGACCAAGTTGGGTGTT+TGG 0.442891 4.3:+15680218 None:intergenic
AAACACTCTCTTGGATTTGT+CGG 0.443935 4.3:-15681881 MS.gene023475:CDS
CAGCAGACCCATTTGATATC+GGG 0.446942 4.3:-15679698 MS.gene023475:CDS
TATCCAATTCCTATGTTCCA+TGG 0.450910 4.3:-15679607 MS.gene023475:CDS
GACAATGGAAAACACTCTCT+TGG 0.450936 4.3:-15681890 MS.gene023475:CDS
CTTGTCTCCAACTGTGCTAA+AGG 0.451379 4.3:-15680937 MS.gene023475:intron
AGAAGATCATTGGTGCTAGA+TGG 0.451764 4.3:-15682537 MS.gene023475:CDS
GATGAGAAAGATGCAACTCT+TGG 0.452575 4.3:+15680975 None:intergenic
TGCAGCCATAAGATCAGCTT+TGG 0.453854 4.3:-15680196 MS.gene023475:CDS
AAAATGTTATCTTCACTCTT+GGG 0.457809 4.3:-15683601 MS.gene023475:CDS
TGAAGTTTGTGAATGCCATT+TGG 0.459168 4.3:+15683275 None:intergenic
AGATCAGCTTTGGTAACAAC+AGG 0.460348 4.3:-15680186 MS.gene023475:intron
CTGTAGTGTCATTGTTTCCA+AGG 0.462626 4.3:+15682476 None:intergenic
GCATCAGTACAGTGTCCAAC+AGG 0.464038 4.3:+15682289 None:intergenic
AAGGTTATTTCCAAGTGTAA+TGG 0.464304 4.3:+15682006 None:intergenic
ATTAAGGTAGATTATGAAGC+AGG 0.465394 4.3:-15681178 MS.gene023475:CDS
TTGATATGGAAGGAAGGTTA+AGG 0.465571 4.3:+15679505 None:intergenic
AACTGTAACAAGAAGATCAT+TGG 0.465970 4.3:-15682547 MS.gene023475:CDS
CAACGCGACACGATAGCAAT+TGG 0.470243 4.3:-15682169 MS.gene023475:CDS
GTAAAGGAAGCTGGTGGAGT+TGG 0.470952 4.3:-15681259 MS.gene023475:CDS
GCCTCTCAAAGCGGAACTGA+TGG 0.471189 4.3:-15679756 MS.gene023475:CDS
CTAGGTGCATATTGTATACA+TGG 0.473758 4.3:-15683671 MS.gene023475:intron
TGGCTGCAGGTGACCAAGTT+GGG 0.475861 4.3:+15680211 None:intergenic
TCATTGAAACTTGCAGACTC+TGG 0.477549 4.3:+15682640 None:intergenic
GTAGTTTCTGTCATTCCAAA+TGG 0.480001 4.3:-15683290 MS.gene023475:CDS
TGTAGCATACCCACAAAGTA+AGG 0.480458 4.3:+15681987 None:intergenic
TGATTCTTCTGCAAATATCT+CGG 0.481072 4.3:+15683805 None:intergenic
CACACTAAGAACCTCATCCT+TGG 0.483752 4.3:-15682493 MS.gene023475:CDS
TGGAAAGGAGTTTGTCAAGT+TGG 0.485654 4.3:-15682589 MS.gene023475:CDS
GTAGAAAATGCAAATTATAG+AGG 0.487178 4.3:-15682385 MS.gene023475:CDS
CTCTCAGCTAGAGATGCTAT+TGG 0.487608 4.3:-15682448 MS.gene023475:CDS
TGTCATTGTTTCCAAGGATG+AGG 0.488136 4.3:+15682482 None:intergenic
ACTTCACACAACTAGAAGTT+GGG 0.489273 4.3:-15683258 MS.gene023475:CDS
TATGCACAGCGTCATGAAGA+TGG 0.492726 4.3:-15681229 MS.gene023475:CDS
TTGACAAACTCCTTTCCACT+TGG 0.494530 4.3:+15682594 None:intergenic
AAACAAGAGATGTGCTAGAA+AGG 0.497886 4.3:-15683882 MS.gene023475:CDS
CACACAGCTTCAACAGCAGC+TGG 0.497918 4.3:-15682415 MS.gene023475:CDS
AACTTCACACAACTAGAAGT+TGG 0.498851 4.3:-15683259 MS.gene023475:CDS
TTCTGCAGCACTTACAGTAA+AGG 0.500122 4.3:-15681275 MS.gene023475:CDS
TAAAATCCAAACACCCAACT+TGG 0.501966 4.3:-15680224 MS.gene023475:CDS
TAGCCATGTCAAATGCTTTG+AGG 0.503512 4.3:+15682260 None:intergenic
ACACCGGGTGCTGCTATGTC+CGG 0.508908 4.3:+15680357 None:intergenic
GGCTATCTACAAAGCTTGCT+GGG 0.512176 4.3:-15682317 MS.gene023475:CDS
AAAGCTGATCTTATGGCTGC+AGG 0.512788 4.3:+15680198 None:intergenic
AGGAGCACCTTTAGCTCACT+TGG 0.515626 4.3:-15682338 MS.gene023475:CDS
GATCAACATACGAAAACAAA+GGG 0.515737 4.3:+15682191 None:intergenic
ATGTCTTGTCCTCATGTGGC+AGG 0.515904 4.3:-15680261 MS.gene023475:CDS
TGGGTCTGCTGCCTTATTTG+TGG 0.516001 4.3:+15679710 None:intergenic
TTTCCAACAGCCATTACACT+TGG 0.522045 4.3:-15682016 MS.gene023475:CDS
ATCCAATTCCTATGTTCCAT+GGG 0.525074 4.3:-15679606 MS.gene023475:CDS
CCATGGTGCTGTATTCGAAA+CGG 0.533211 4.3:+15682075 None:intergenic
AGTTTCAATGATGAAGCAAT+GGG 0.533726 4.3:-15682628 MS.gene023475:CDS
TAGATAGCCAAGTGAGCTAA+AGG 0.534407 4.3:+15682331 None:intergenic
ATTTCAACTCAAAAGTTGCA+TGG 0.536725 4.3:-15679309 MS.gene023475:CDS
CTGAATGAAACAATGGCAGC+AGG 0.538323 4.3:-15681343 MS.gene023475:CDS
GCTTGCTGGGACGTTCCTGT+TGG 0.538433 4.3:-15682304 MS.gene023475:CDS
CTTCTTTATAGCTATAAACA+TGG 0.540098 4.3:-15683462 MS.gene023475:CDS
GCTAGAGATGCTATTGGCCA+TGG 0.541370 4.3:-15682442 MS.gene023475:CDS
GGAAAACTCAGCCTTGCAGT+TGG 0.542209 4.3:+15681026 None:intergenic
TATTATGACCCATGGAACAT+AGG 0.542775 4.3:+15679598 None:intergenic
TTGTTTGTTGCAACTTGTAG+TGG 0.543136 4.3:+15679548 None:intergenic
CTTTAGCACAGTTGGAGACA+AGG 0.546000 4.3:+15680938 None:intergenic
TTGGAATTGATATGGAAGGA+AGG 0.546129 4.3:+15679499 None:intergenic
TCCATCAGTTCCGCTTTGAG+AGG 0.546581 4.3:+15679755 None:intergenic
TGGATCACGTGCAATGCGCT+CGG 0.546600 4.3:+15681847 None:intergenic
CTTGCTTCTGGTTTAGCAAG+AGG 0.547357 4.3:-15682361 MS.gene023475:CDS
TCTTTCCACGCAACTTCCAA+AGG 0.554837 4.3:-15682145 MS.gene023475:CDS
ATGGCTGCAGGTGACCAAGT+TGG 0.555589 4.3:+15680210 None:intergenic
TTTGGCTGCATTTCCACCCA+AGG 0.561186 4.3:-15680328 MS.gene023475:CDS
AAGTTTCAATGATGAAGCAA+TGG 0.562500 4.3:-15682629 MS.gene023475:CDS
GCACTTACAGTAAAGGAAGC+TGG 0.562837 4.3:-15681268 MS.gene023475:CDS
GGAATGACAGAAACTACCTC+TGG 0.565610 4.3:+15683296 None:intergenic
TGTGTCTATGACGCCTATGA+TGG 0.567504 4.3:+15683169 None:intergenic
AGGTTTGGAATTGATATGGA+AGG 0.568145 4.3:+15679495 None:intergenic
TTGAAGCTGTGTGAGTTCCA+TGG 0.569128 4.3:+15682425 None:intergenic
GCTTCTGGTTTAGCAAGAGG+AGG 0.571874 4.3:-15682358 MS.gene023475:CDS
TGTTATCTTCACTCTTGGGA+AGG 0.572999 4.3:-15683597 MS.gene023475:intron
ACTGAAAGCAACTTAGGTCA+AGG 0.574792 4.3:-15683194 MS.gene023475:CDS
ACAGTTGGAGACAAGGTACT+AGG 0.581400 4.3:+15680945 None:intergenic
GGAGGCCTTATATCAGAAGA+AGG 0.582543 4.3:-15679735 MS.gene023475:CDS
CCTAACAAAGCAATCAATGC+AGG 0.582803 4.3:-15679660 MS.gene023475:CDS
GTTGCATCTTTCTCATCTAG+AGG 0.585537 4.3:-15680969 MS.gene023475:CDS
GCGCATTGCACGTGATCCAT+CGG 0.586568 4.3:-15681843 MS.gene023475:CDS
AGCAGACCCATTTGATATCG+GGG 0.587889 4.3:-15679697 MS.gene023475:CDS
AGATGCTGTATTATGACCCA+TGG 0.590460 4.3:+15679590 None:intergenic
TCTCAAAGCGGAACTGATGG+AGG 0.593016 4.3:-15679753 MS.gene023475:CDS
ATCAATGTCTTGTCCTCATG+TGG 0.603786 4.3:-15680265 MS.gene023475:CDS
AAAATTCCATCCAAGTGGAA+AGG 0.604125 4.3:-15682604 MS.gene023475:CDS
TGCAGCCAAAATGTCCACAC+CGG 0.604840 4.3:+15680341 None:intergenic
ACCATGGCTCATTACAGTTG+CGG 0.605785 4.3:-15682059 MS.gene023475:CDS
GGAAGCCTAACATGGACAGA+TGG 0.610473 4.3:-15679273 MS.gene023475:CDS
ACAGATTTGGAAGCCTAACA+TGG 0.611247 4.3:-15679281 MS.gene023475:CDS
TTGGCTGCATTTCCACCCAA+GGG 0.612405 4.3:-15680327 MS.gene023475:CDS
CAGGGACAGTCCATTGACAA+TGG 0.614731 4.3:-15681905 MS.gene023475:CDS
GTGGAAGGTTTCCAACTGCA+AGG 0.614861 4.3:-15681037 MS.gene023475:intron
TGATCAACATACGAAAACAA+AGG 0.622316 4.3:+15682190 None:intergenic
CTCTTGCTAAACCAGAAGCA+AGG 0.626020 4.3:+15682362 None:intergenic
ATTCTTCTGCAAATATCTCG+GGG 0.626292 4.3:+15683807 None:intergenic
TAACCTATATTAGAAGAGCA+AGG 0.627264 4.3:-15681144 MS.gene023475:intron
TTAAGGTAGATTATGAAGCA+GGG 0.632035 4.3:-15681177 MS.gene023475:CDS
TTGCGGCCACTACAATCGAT+AGG 0.633312 4.3:-15682042 MS.gene023475:CDS
TCATAATCTACCTTAATGCA+CGG 0.633313 4.3:+15681184 None:intergenic
TAGCCGGACATAGCAGCACC+CGG 0.633717 4.3:-15680360 MS.gene023475:CDS
ATGAGAACAGTGACAAACGT+TGG 0.635977 4.3:-15679453 MS.gene023475:CDS
TAGAAGTTGGGACTTCATTG+GGG 0.636639 4.3:-15683246 MS.gene023475:CDS
GCAGCCAAAATGTCCACACC+GGG 0.637864 4.3:+15680342 None:intergenic
GCTGCTATTCCTGCCACATG+AGG 0.638035 4.3:+15680252 None:intergenic
GGACATAGCAGCACCCGGTG+TGG 0.639225 4.3:-15680355 MS.gene023475:CDS
TGGAAGTCTGAATGAAACAA+TGG 0.642638 4.3:-15681350 MS.gene023475:CDS
TGATACCTTTGGAAGTTGCG+TGG 0.649399 4.3:+15682140 None:intergenic
AAAAGTCCTATCGATTGTAG+TGG 0.654640 4.3:+15682036 None:intergenic
ATCATAGGCGTCATAGACAC+AGG 0.655865 4.3:-15683167 MS.gene023475:intron
TCTCACGCTAAATCATCCGA+TGG 0.656781 4.3:+15681827 None:intergenic
GCAGACCCATTTGATATCGG+GGG 0.659152 4.3:-15679696 MS.gene023475:CDS
TAGGTGCATATTGTATACAT+GGG 0.667259 4.3:-15683670 MS.gene023475:CDS
GCCGCAACTGTAATGAGCCA+TGG 0.676151 4.3:+15682058 None:intergenic
TATCCTCAAAGCATTTGACA+TGG 0.678885 4.3:-15682263 MS.gene023475:CDS
AAAAGTGCAGCCTCTCAAAG+CGG 0.681198 4.3:-15679765 MS.gene023475:intron
CTTACAGTAAAGGAAGCTGG+TGG 0.703562 4.3:-15681265 MS.gene023475:CDS
GAAGATGGACTCAATGAATG+TGG 0.703870 4.3:-15681214 MS.gene023475:CDS
GAATTGGATATAATCCTCTG+TGG 0.708669 4.3:+15679620 None:intergenic
ATACAATGTAGAGTTTCCAG+AGG 0.721115 4.3:-15683312 MS.gene023475:intron
CATATACAACATTACCACAG+AGG 0.731399 4.3:-15679634 MS.gene023475:CDS
TTTGACATGGCTATACACGA+TGG 0.741019 4.3:-15682250 MS.gene023475:CDS
CCGTTTCGAATACAGCACCA+TGG 0.744343 4.3:-15682075 MS.gene023475:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATTATTATGTCAA+CGG + chr4.3:15681489-15681508 None:intergenic 10.0%
!! TTAATGTAATGATAATTATT+AGG + chr4.3:15679578-15679597 None:intergenic 10.0%
!!! ATCATTATATTTTTGTTTTA+TGG + chr4.3:15682672-15682691 None:intergenic 10.0%
!!! GAGATTTTATATATATATTT+AGG + chr4.3:15681688-15681707 None:intergenic 10.0%
!!! TATTTTATAAAGAAAAGTTT+AGG + chr4.3:15683273-15683292 None:intergenic 10.0%
!! AAAAATATAATGATCTTACA+TGG - chr4.3:15682678-15682697 MS.gene023475:intron 15.0%
!! ATTGAAATTTGAAGATAATT+TGG + chr4.3:15682999-15683018 None:intergenic 15.0%
!! TAACAAAAAATCTTAGAATT+TGG - chr4.3:15682400-15682419 MS.gene023475:CDS 15.0%
!! TTAAAAACTAATCTTAATCA+TGG + chr4.3:15679752-15679771 None:intergenic 15.0%
!!! AATATTTTTTGTTGAAAACT+CGG - chr4.3:15681499-15681518 MS.gene023475:intron 15.0%
!!! GAAGTTATTTATTTTTACTT+TGG + chr4.3:15683089-15683108 None:intergenic 15.0%
!!! GTTCTTTTATTTAATTTTGT+TGG + chr4.3:15682484-15682503 None:intergenic 15.0%
!!! TTTAAAAAAGTGCTAAAAAT+AGG + chr4.3:15679776-15679795 None:intergenic 15.0%
!! AAATTTGAAGATAATTTGGA+TGG + chr4.3:15682995-15683014 None:intergenic 20.0%
!! ACTAAATAAATGTCTATTTG+AGG - chr4.3:15682615-15682634 MS.gene023475:CDS 20.0%
!! TTAATATTATTAAGCTCATG+TGG - chr4.3:15682061-15682080 MS.gene023475:CDS 20.0%
!!! ATGATATCAATATGTTTTCA+AGG - chr4.3:15682534-15682553 MS.gene023475:CDS 20.0%
!!! CTAAGATTTTTTGTTATGTT+TGG + chr4.3:15682396-15682415 None:intergenic 20.0%
!!! CTAGTTAGTTTTGATATTAT+TGG + chr4.3:15683321-15683340 None:intergenic 20.0%
! AAAATGTTATCTTCACTCTT+GGG - chr4.3:15679516-15679535 MS.gene023475:CDS 25.0%
! AACTAATCTTAATCATGGTA+AGG + chr4.3:15679747-15679766 None:intergenic 25.0%
! ACCTTAAAATTCTTACTTGT+AGG - chr4.3:15682212-15682231 MS.gene023475:CDS 25.0%
! AGATATAGCAAGTATGAATA+TGG - chr4.3:15679720-15679739 MS.gene023475:CDS 25.0%
! CAAACACTAGAAAATGAAAA+TGG - chr4.3:15680189-15680208 MS.gene023475:CDS 25.0%
! CAAGAAATCAAGTTTATCAT+TGG + chr4.3:15680446-15680465 None:intergenic 25.0%
! CAATTACTACAAACTAAAGT+TGG + chr4.3:15679350-15679369 None:intergenic 25.0%
! CAATTGTTTAAACTAATAGC+CGG + chr4.3:15682340-15682359 None:intergenic 25.0%
! CTTCTTTATAGCTATAAACA+TGG - chr4.3:15679655-15679674 MS.gene023475:CDS 25.0%
! GAATTGAAGTTCAAAATTTG+AGG + chr4.3:15683754-15683773 None:intergenic 25.0%
! GTAGAAAATGCAAATTATAG+AGG - chr4.3:15680732-15680751 MS.gene023475:intron 25.0%
! TCTAGAGAAGAATTCAAATA+GGG + chr4.3:15681390-15681409 None:intergenic 25.0%
! TGATAAACTTGATTTCTTGA+AGG - chr4.3:15680447-15680466 MS.gene023475:intron 25.0%
! TTTATTAAATGCATGTTCCT+AGG - chr4.3:15679428-15679447 MS.gene023475:CDS 25.0%
!! AAAATGGATTTCTTGCAATA+CGG - chr4.3:15680205-15680224 MS.gene023475:CDS 25.0%
!! ACAGAAAGTAATTTTTGTGT+TGG - chr4.3:15683032-15683051 MS.gene023475:intron 25.0%
!! ACCTACAAGTAAGAATTTTA+AGG + chr4.3:15682216-15682235 None:intergenic 25.0%
!! ATTTTACTCTTGGAATAAGT+AGG - chr4.3:15681656-15681675 MS.gene023475:intron 25.0%
!! CTTACATGGTTTTCAATTTA+TGG - chr4.3:15682692-15682711 MS.gene023475:intron 25.0%
!! GTTTTCATTTTCAAATGCTT+TGG + chr4.3:15680001-15680020 None:intergenic 25.0%
!! TTCTAGAGAAGAATTCAAAT+AGG + chr4.3:15681391-15681410 None:intergenic 25.0%
!! TTTAGAAAGAAAAGCACAAT+CGG - chr4.3:15682314-15682333 MS.gene023475:CDS 25.0%
!!! ACAAGTAAGAATTTTAAGGT+TGG + chr4.3:15682212-15682231 None:intergenic 25.0%
!!! CAAGTAAGAATTTTAAGGTT+GGG + chr4.3:15682211-15682230 None:intergenic 25.0%
!!! CATTTTCATTTTCTAGTGTT+TGG + chr4.3:15680191-15680210 None:intergenic 25.0%
!!! TTTTTGTTATGTTTGGTTGA+AGG + chr4.3:15682389-15682408 None:intergenic 25.0%
AACTGTAACAAGAAGATCAT+TGG - chr4.3:15680570-15680589 MS.gene023475:intron 30.0%
AAGTTTCAATGATGAAGCAA+TGG - chr4.3:15680488-15680507 MS.gene023475:intron 30.0%
ACAGTTGATTGATATAATGC+AGG - chr4.3:15681193-15681212 MS.gene023475:CDS 30.0%
ACTATGAAATGAAGTAACTC+TGG - chr4.3:15681630-15681649 MS.gene023475:intron 30.0%
AGTTTCAATGATGAAGCAAT+GGG - chr4.3:15680489-15680508 MS.gene023475:intron 30.0%
ATCCTACAATACTACAGATA+TGG + chr4.3:15682460-15682479 None:intergenic 30.0%
ATTAAGGTAGATTATGAAGC+AGG - chr4.3:15681939-15681958 MS.gene023475:intron 30.0%
ATTTCAACTCAAAAGTTGCA+TGG - chr4.3:15683808-15683827 MS.gene023475:CDS 30.0%
ATTTGGATTAAGTCTAACTC+AGG - chr4.3:15682417-15682436 MS.gene023475:CDS 30.0%
CAAAATGTTATCTTCACTCT+TGG - chr4.3:15679515-15679534 MS.gene023475:CDS 30.0%
CAAAGACTGTTATAGGAAAA+TGG - chr4.3:15682113-15682132 MS.gene023475:CDS 30.0%
CAAATTTCAGAAACATGATC+TGG + chr4.3:15682257-15682276 None:intergenic 30.0%
CAACTACTTCTGTATCAAAT+TGG - chr4.3:15681151-15681170 MS.gene023475:CDS 30.0%
CAGTTGATTGATATAATGCA+GGG - chr4.3:15681194-15681213 MS.gene023475:CDS 30.0%
CTGAAATTTCTGATCTTAAC+CGG + chr4.3:15680063-15680082 None:intergenic 30.0%
CTGAGTTGTTTGATCTTAAT+TGG + chr4.3:15680269-15680288 None:intergenic 30.0%
GATCAACATACGAAAACAAA+GGG + chr4.3:15680929-15680948 None:intergenic 30.0%
GTTGTTTGATCTTAATTGGA+CGG + chr4.3:15680265-15680284 None:intergenic 30.0%
TAAATAGAGAATTGTTCGCT+AGG - chr4.3:15682287-15682306 MS.gene023475:CDS 30.0%
TAACCTATATTAGAAGAGCA+AGG - chr4.3:15681973-15681992 MS.gene023475:intron 30.0%
TACACAAAATCCCTAGAAAA+CGG - chr4.3:15680407-15680426 MS.gene023475:intron 30.0%
TAGGTGCATATTGTATACAT+GGG - chr4.3:15679447-15679466 MS.gene023475:CDS 30.0%
TATGCATAGATTGACAAGAT+TGG - chr4.3:15682011-15682030 MS.gene023475:CDS 30.0%
TATTATTAAGCTCATGTGGA+AGG - chr4.3:15682065-15682084 MS.gene023475:CDS 30.0%
TCATAATCTACCTTAATGCA+CGG + chr4.3:15681936-15681955 None:intergenic 30.0%
TGATCAACATACGAAAACAA+AGG + chr4.3:15680930-15680949 None:intergenic 30.0%
TGATTCTTCTGCAAATATCT+CGG + chr4.3:15679315-15679334 None:intergenic 30.0%
TGGAAATAACCTTACTTTGT+GGG - chr4.3:15681121-15681140 MS.gene023475:intron 30.0%
TTAAGGTAGATTATGAAGCA+GGG - chr4.3:15681940-15681959 MS.gene023475:intron 30.0%
TTGGAAATAACCTTACTTTG+TGG - chr4.3:15681120-15681139 MS.gene023475:intron 30.0%
TTTGGTTGGATATTTGTAAG+AGG + chr4.3:15679983-15680002 None:intergenic 30.0%
! AAATGGATTTCTTGCAATAC+GGG - chr4.3:15680206-15680225 MS.gene023475:CDS 30.0%
! AAGGTTATTTCCAAGTGTAA+TGG + chr4.3:15681114-15681133 None:intergenic 30.0%
! AGAGTGAAGATAACATTTTG+TGG + chr4.3:15679515-15679534 None:intergenic 30.0%
! AGCTATAAACATGGATTTTC+AGG - chr4.3:15679664-15679683 MS.gene023475:CDS 30.0%
! AGTGGATTCATATTCTTATC+TGG - chr4.3:15682826-15682845 MS.gene023475:intron 30.0%
! AGTTTTCCAAAGACTGTTAT+AGG - chr4.3:15682106-15682125 MS.gene023475:CDS 30.0%
! CATTTTCCTATAACAGTCTT+TGG + chr4.3:15682115-15682134 None:intergenic 30.0%
! GCTATAAACATGGATTTTCA+GGG - chr4.3:15679665-15679684 MS.gene023475:CDS 30.0%
! TCATTTTCAAATGCTTTGGT+TGG + chr4.3:15679997-15680016 None:intergenic 30.0%
! TGTGATCAGTTATTCCTTTT+AGG + chr4.3:15680608-15680627 None:intergenic 30.0%
! TTCAGTGAAAACAGTTTTTG+AGG + chr4.3:15679909-15679928 None:intergenic 30.0%
! TTTTTAAATGCGATTTACCG+AGG - chr4.3:15680310-15680329 MS.gene023475:CDS 30.0%
!! ACTCTCACTTTTATACCATA+AGG + chr4.3:15683727-15683746 None:intergenic 30.0%
!! TGATACTTTTTAGCAGTTTC+TGG + chr4.3:15679492-15679511 None:intergenic 30.0%
!! TTCATTTTCTAGTGTTTGGT+TGG + chr4.3:15680187-15680206 None:intergenic 30.0%
!!! GACAACTCATATTTTAACCT+CGG + chr4.3:15680330-15680349 None:intergenic 30.0%
AAAATTCCATCCAAGTGGAA+AGG - chr4.3:15680513-15680532 MS.gene023475:intron 35.0%
AAACAAGAGATGTGCTAGAA+AGG - chr4.3:15679235-15679254 MS.gene023475:CDS 35.0%
AAACACTCTCTTGGATTTGT+CGG - chr4.3:15681236-15681255 MS.gene023475:CDS 35.0%
AACTTCACACAACTAGAAGT+TGG - chr4.3:15679858-15679877 MS.gene023475:intron 35.0%
ACTGACAATCCTTACTTCAA+AGG + chr4.3:15681746-15681765 None:intergenic 35.0%
ACTTCACACAACTAGAAGTT+GGG - chr4.3:15679859-15679878 MS.gene023475:intron 35.0%
AGAAACAACTGTGATACCTT+TGG + chr4.3:15680991-15681010 None:intergenic 35.0%
AGAAGAAGGTTCCACAAATA+AGG - chr4.3:15683396-15683415 MS.gene023475:intron 35.0%
ATACAATGTAGAGTTTCCAG+AGG - chr4.3:15679805-15679824 MS.gene023475:intron 35.0%
ATCCAATTCCTATGTTCCAT+GGG - chr4.3:15683511-15683530 MS.gene023475:intron 35.0%
ATGAGTTGTCCAGTGAAAAT+TGG - chr4.3:15680340-15680359 MS.gene023475:CDS 35.0%
ATTCTTCTGCAAATATCTCG+GGG + chr4.3:15679313-15679332 None:intergenic 35.0%
CATATACAACATTACCACAG+AGG - chr4.3:15683483-15683502 MS.gene023475:CDS 35.0%
CATGTATACAATATGCACCT+AGG + chr4.3:15679448-15679467 None:intergenic 35.0%
CGAACATCAACATAGTTGTT+TGG - chr4.3:15682962-15682981 MS.gene023475:intron 35.0%
CTAGGTGCATATTGTATACA+TGG - chr4.3:15679446-15679465 MS.gene023475:CDS 35.0%
CTTCTTCATACACACAAACA+CGG - chr4.3:15681322-15681341 MS.gene023475:CDS 35.0%
GAATTGGATATAATCCTCTG+TGG + chr4.3:15683500-15683519 None:intergenic 35.0%
GATCTTCTTGTTACAGTTTG+TGG + chr4.3:15680568-15680587 None:intergenic 35.0%
GATTCTTCTGCAAATATCTC+GGG + chr4.3:15679314-15679333 None:intergenic 35.0%
GCTATAGTGAATAGTCCTTA+TGG - chr4.3:15683709-15683728 MS.gene023475:intron 35.0%
GGTGGCTATACAATATTCAA+CGG - chr4.3:15681576-15681595 MS.gene023475:intron 35.0%
GTAGTTTCTGTCATTCCAAA+TGG - chr4.3:15679827-15679846 MS.gene023475:intron 35.0%
GTTATATATTGCTTCTCTGC+TGG + chr4.3:15682566-15682585 None:intergenic 35.0%
TAAAATCCAAACACCCAACT+TGG - chr4.3:15682893-15682912 MS.gene023475:intron 35.0%
TATATTAGAAGAGCAAGGTG+AGG - chr4.3:15681978-15681997 MS.gene023475:intron 35.0%
TATCCAATTCCTATGTTCCA+TGG - chr4.3:15683510-15683529 MS.gene023475:intron 35.0%
TATTATGACCCATGGAACAT+AGG + chr4.3:15683522-15683541 None:intergenic 35.0%
TCACCTTGCTCTTCTAATAT+AGG + chr4.3:15681979-15681998 None:intergenic 35.0%
TGAAATGAAGCTTACGTTGA+AGG + chr4.3:15683794-15683813 None:intergenic 35.0%
TGAAGTTTGTGAATGCCATT+TGG + chr4.3:15679845-15679864 None:intergenic 35.0%
TGCCATATCTGTAGTATTGT+AGG - chr4.3:15682455-15682474 MS.gene023475:CDS 35.0%
TGGAACCTTCTTCTGATATA+AGG + chr4.3:15683390-15683409 None:intergenic 35.0%
TGGAAGTCTGAATGAAACAA+TGG - chr4.3:15681767-15681786 MS.gene023475:intron 35.0%
TGTGTATGAAGAAGGAAGAA+AGG + chr4.3:15681316-15681335 None:intergenic 35.0%
TGTTACCAAAGCTGATCTTA+TGG + chr4.3:15682929-15682948 None:intergenic 35.0%
TTACTGTTGTATGACTCTTC+AGG + chr4.3:15683645-15683664 None:intergenic 35.0%
TTCGAAACGGTTTGAGAAAT+AGG + chr4.3:15681032-15681051 None:intergenic 35.0%
TTCTTCATACACACAAACAC+GGG - chr4.3:15681323-15681342 MS.gene023475:CDS 35.0%
TTGATATGGAAGGAAGGTTA+AGG + chr4.3:15683615-15683634 None:intergenic 35.0%
TTGCATGGTGATTACAGATT+TGG - chr4.3:15683823-15683842 MS.gene023475:CDS 35.0%
TTGGAATTGATATGGAAGGA+AGG + chr4.3:15683621-15683640 None:intergenic 35.0%
! AAAAGTCCTATCGATTGTAG+TGG + chr4.3:15681084-15681103 None:intergenic 35.0%
! ACTCTGGCAAATTTTACTCT+TGG - chr4.3:15681646-15681665 MS.gene023475:intron 35.0%
! AGGTTTGGAATTGATATGGA+AGG + chr4.3:15683625-15683644 None:intergenic 35.0%
! CTTCAGGTTTGGAATTGATA+TGG + chr4.3:15683629-15683648 None:intergenic 35.0%
! GAGAAATTCGATTTGAGTGA+AGG - chr4.3:15682586-15682605 MS.gene023475:CDS 35.0%
! GATGTCTTAACTGTTTCTCT+TGG - chr4.3:15680894-15680913 MS.gene023475:intron 35.0%
! GTTTTCACTGAAAGCAACTT+AGG - chr4.3:15679917-15679936 MS.gene023475:intron 35.0%
! TATCCTCAAAGCATTTGACA+TGG - chr4.3:15680854-15680873 MS.gene023475:intron 35.0%
! TTAACTGTTTCTCTTGGCAT+TGG - chr4.3:15680900-15680919 MS.gene023475:intron 35.0%
! TTGTTTGTTGCAACTTGTAG+TGG + chr4.3:15683572-15683591 None:intergenic 35.0%
!! ACTTGCTATATCTTCTGCTT+GGG + chr4.3:15679713-15679732 None:intergenic 35.0%
!! AGAGTGTTTTCCATTGTCAA+TGG + chr4.3:15681225-15681244 None:intergenic 35.0%
!! AGTGAAAACAGTTTTTGAGG+AGG + chr4.3:15679906-15679925 None:intergenic 35.0%
!! CTATGTCTTCCTTTGAAGTA+AGG - chr4.3:15681734-15681753 MS.gene023475:intron 35.0%
!! CTTGATTTCTTGAAGGCATT+TGG - chr4.3:15680454-15680473 MS.gene023475:intron 35.0%
!! GTGAAAACAGTTTTTGAGGA+GGG + chr4.3:15679905-15679924 None:intergenic 35.0%
!! TACTTGCTATATCTTCTGCT+TGG + chr4.3:15679714-15679733 None:intergenic 35.0%
AACACTCTCTTGGATTTGTC+GGG - chr4.3:15681237-15681256 MS.gene023475:CDS 40.0%
AAGGGAAGTAAAAAGAGCAG+TGG - chr4.3:15682808-15682827 MS.gene023475:intron 40.0%
AATTATAGAGGCCTTGCTTC+TGG - chr4.3:15680744-15680763 MS.gene023475:intron 40.0%
ACAGATTTGGAAGCCTAACA+TGG - chr4.3:15683836-15683855 MS.gene023475:CDS 40.0%
ACTAGAAGTTGGGACTTCAT+TGG - chr4.3:15679869-15679888 MS.gene023475:intron 40.0%
ACTGAAAGCAACTTAGGTCA+AGG - chr4.3:15679923-15679942 MS.gene023475:intron 40.0%
AGAACCGACTAATCCTATAG+AGG - chr4.3:15681533-15681552 MS.gene023475:intron 40.0%
AGATGCTGTATTATGACCCA+TGG + chr4.3:15683530-15683549 None:intergenic 40.0%
ATCAATGTCTTGTCCTCATG+TGG - chr4.3:15682852-15682871 MS.gene023475:intron 40.0%
ATCATAACCTGCACTCTTCT+GGG - chr4.3:15682719-15682738 MS.gene023475:intron 40.0%
ATGAGAACAGTGACAAACGT+TGG - chr4.3:15683664-15683683 MS.gene023475:CDS 40.0%
CATTCATGCAGTCAGCAAAT+CGG - chr4.3:15680031-15680050 MS.gene023475:intron 40.0%
CATTCATGCTGTCAGCAATT+TGG - chr4.3:15680237-15680256 MS.gene023475:CDS 40.0%
CCTAACAAAGCAATCAATGC+AGG - chr4.3:15683457-15683476 MS.gene023475:CDS 40.0%
CGTGTTTGTGTGTATGAAGA+AGG + chr4.3:15681324-15681343 None:intergenic 40.0%
CTAGAAGTTGGGACTTCATT+GGG - chr4.3:15679870-15679889 MS.gene023475:intron 40.0%
CTGAGTCATCCGATGAAAAT+CGG - chr4.3:15680134-15680153 MS.gene023475:intron 40.0%
GAATGACTGATGGAAATAGC+CGG - chr4.3:15682741-15682760 MS.gene023475:intron 40.0%
GACAATGGAAAACACTCTCT+TGG - chr4.3:15681227-15681246 MS.gene023475:CDS 40.0%
GATGAGAAAGATGCAACTCT+TGG + chr4.3:15682145-15682164 None:intergenic 40.0%
GGCTATACAATATTCAACGG+TGG - chr4.3:15681579-15681598 MS.gene023475:intron 40.0%
GTTGCATCTTTCTCATCTAG+AGG - chr4.3:15682148-15682167 MS.gene023475:CDS 40.0%
GTTGTCCAGTGAAAATTGGA+TGG - chr4.3:15680344-15680363 MS.gene023475:CDS 40.0%
GTTTCTTCAGCTGGAAATTC+TGG - chr4.3:15681005-15681024 MS.gene023475:CDS 40.0%
TAGAAGTTGGGACTTCATTG+GGG - chr4.3:15679871-15679890 MS.gene023475:intron 40.0%
TAGATAGCCAAGTGAGCTAA+AGG + chr4.3:15680789-15680808 None:intergenic 40.0%
TAGCCATGTCAAATGCTTTG+AGG + chr4.3:15680860-15680879 None:intergenic 40.0%
TCATTGAAACTTGCAGACTC+TGG + chr4.3:15680480-15680499 None:intergenic 40.0%
TGAAGTAAGGATTGTCAGTC+TGG - chr4.3:15681747-15681766 MS.gene023475:intron 40.0%
TGAGGATACCAATAGCTGTT+AGG - chr4.3:15683878-15683897 MS.gene023475:CDS 40.0%
TGGAAAGGAGTTTGTCAAGT+TGG - chr4.3:15680528-15680547 MS.gene023475:intron 40.0%
TGGATTAAGTCTAACTCAGG+TGG - chr4.3:15682420-15682439 MS.gene023475:CDS 40.0%
TGGGAAAAATTCCATCCAAG+TGG - chr4.3:15680508-15680527 MS.gene023475:intron 40.0%
TGGTATACTTCCGTGCATTA+AGG - chr4.3:15681923-15681942 MS.gene023475:intron 40.0%
TGTAGCATACCCACAAAGTA+AGG + chr4.3:15681133-15681152 None:intergenic 40.0%
TGTATGGTCCTAACAGCTAT+TGG + chr4.3:15683889-15683908 None:intergenic 40.0%
TGTCATTGTTTCCAAGGATG+AGG + chr4.3:15680638-15680657 None:intergenic 40.0%
TGTTATCTTCACTCTTGGGA+AGG - chr4.3:15679520-15679539 MS.gene023475:CDS 40.0%
TTAGGTCAAGGAACCATCAT+AGG - chr4.3:15679935-15679954 MS.gene023475:intron 40.0%
TTCTGCAGCACTTACAGTAA+AGG - chr4.3:15681842-15681861 MS.gene023475:CDS 40.0%
TTGACAAACTCCTTTCCACT+TGG + chr4.3:15680526-15680545 None:intergenic 40.0%
TTTCCAACAGCCATTACACT+TGG - chr4.3:15681101-15681120 MS.gene023475:intron 40.0%
TTTCCAAGTGTAATGGCTGT+TGG + chr4.3:15681107-15681126 None:intergenic 40.0%
TTTGACATGGCTATACACGA+TGG - chr4.3:15680867-15680886 MS.gene023475:intron 40.0%
! AAGGCCTCTATAGGATTAGT+CGG + chr4.3:15681540-15681559 None:intergenic 40.0%
! ACTGCTCTTTTTACTTCCCT+TGG + chr4.3:15682809-15682828 None:intergenic 40.0%
! AGATCAGCTTTGGTAACAAC+AGG - chr4.3:15682931-15682950 MS.gene023475:intron 40.0%
! CAGATGGCAATCATTTTGTG+AGG - chr4.3:15683860-15683879 MS.gene023475:CDS 40.0%
! CTGCTCTTTTTACTTCCCTT+GGG + chr4.3:15682808-15682827 None:intergenic 40.0%
! CTGTAGTGTCATTGTTTCCA+AGG + chr4.3:15680644-15680663 None:intergenic 40.0%
! CTTCACCATCCAATTTTCAC+TGG + chr4.3:15680352-15680371 None:intergenic 40.0%
! GAAAATCGGATGGTGCTAAT+TGG - chr4.3:15680148-15680167 MS.gene023475:intron 40.0%
! GAAGATGGACTCAATGAATG+TGG - chr4.3:15681903-15681922 MS.gene023475:CDS 40.0%
! GTTGCAACTTGTAGTGGTTT+TGG + chr4.3:15683566-15683585 None:intergenic 40.0%
! GTTGTATGACTCTTCAGGTT+TGG + chr4.3:15683640-15683659 None:intergenic 40.0%
! TAGCACCATCCGATTTTCAT+CGG + chr4.3:15680146-15680165 None:intergenic 40.0%
! TCTAGGGATTTTGTGTAGTC+AGG + chr4.3:15680404-15680423 None:intergenic 40.0%
! TTTAGGTGAGTTGGGTCTTA+GGG + chr4.3:15683191-15683210 None:intergenic 40.0%
!! ACATTACAACGCCGTTTTCT+AGG + chr4.3:15680421-15680440 None:intergenic 40.0%
!! AGAAGATCATTGGTGCTAGA+TGG - chr4.3:15680580-15680599 MS.gene023475:intron 40.0%
!! ATCACAGTTGTTTCTTCAGC+TGG - chr4.3:15680996-15681015 MS.gene023475:CDS 40.0%
!! CATTACAACGCCGTTTTCTA+GGG + chr4.3:15680420-15680439 None:intergenic 40.0%
!! CCTGCATTGATTGCTTTGTT+AGG + chr4.3:15683460-15683479 None:intergenic 40.0%
!! CTATAGGATTAGTCGGTTCT+TGG + chr4.3:15681533-15681552 None:intergenic 40.0%
AAAGCTGATCTTATGGCTGC+AGG + chr4.3:15682922-15682941 None:intergenic 45.0%
ACCATGGCTCATTACAGTTG+CGG - chr4.3:15681058-15681077 MS.gene023475:intron 45.0%
AGCAGACCCATTTGATATCG+GGG - chr4.3:15683420-15683439 MS.gene023475:CDS 45.0%
ATCATAGGCGTCATAGACAC+AGG - chr4.3:15679950-15679969 MS.gene023475:intron 45.0%
CAAACTCCTTTCCACTTGGA+TGG + chr4.3:15680522-15680541 None:intergenic 45.0%
CACACTAAGAACCTCATCCT+TGG - chr4.3:15680624-15680643 MS.gene023475:intron 45.0%
CAGCAGACCCATTTGATATC+GGG - chr4.3:15683419-15683438 MS.gene023475:CDS 45.0%
CATCATAACCTGCACTCTTC+TGG - chr4.3:15682718-15682737 MS.gene023475:intron 45.0%
CTCTCAGCTAGAGATGCTAT+TGG - chr4.3:15680669-15680688 MS.gene023475:intron 45.0%
CTCTTGCTAAACCAGAAGCA+AGG + chr4.3:15680758-15680777 None:intergenic 45.0%
CTGAATGAAACAATGGCAGC+AGG - chr4.3:15681774-15681793 MS.gene023475:intron 45.0%
CTTACAGTAAAGGAAGCTGG+TGG - chr4.3:15681852-15681871 MS.gene023475:CDS 45.0%
CTTGTCTCCAACTGTGCTAA+AGG - chr4.3:15682180-15682199 MS.gene023475:CDS 45.0%
CTTTAGCACAGTTGGAGACA+AGG + chr4.3:15682182-15682201 None:intergenic 45.0%
GACCCATGGAACATAGGAAT+TGG + chr4.3:15683516-15683535 None:intergenic 45.0%
GATTGCCATCTGTCCATGTT+AGG + chr4.3:15683852-15683871 None:intergenic 45.0%
GCACTTACAGTAAAGGAAGC+TGG - chr4.3:15681849-15681868 MS.gene023475:CDS 45.0%
GCAGCAGACCCATTTGATAT+CGG - chr4.3:15683418-15683437 MS.gene023475:CDS 45.0%
GGAATGACAGAAACTACCTC+TGG + chr4.3:15679824-15679843 None:intergenic 45.0%
GGCTATACCTTTAGCACAGT+TGG + chr4.3:15682190-15682209 None:intergenic 45.0%
GGTGCTAGATGGTTCCTAAA+AGG - chr4.3:15680591-15680610 MS.gene023475:intron 45.0%
GTCATCCGATGAAAATCGGA+TGG - chr4.3:15680138-15680157 MS.gene023475:intron 45.0%
TATGCACAGCGTCATGAAGA+TGG - chr4.3:15681888-15681907 MS.gene023475:CDS 45.0%
TCTCACGCTAAATCATCCGA+TGG + chr4.3:15681293-15681312 None:intergenic 45.0%
TCTTCACTCTTGGGAAGGTA+TGG - chr4.3:15679525-15679544 MS.gene023475:CDS 45.0%
TCTTTCCACGCAACTTCCAA+AGG - chr4.3:15680972-15680991 MS.gene023475:CDS 45.0%
TGCAGCCATAAGATCAGCTT+TGG - chr4.3:15682921-15682940 MS.gene023475:intron 45.0%
TGGCTATCTACAAAGCTTGC+TGG - chr4.3:15680799-15680818 MS.gene023475:intron 45.0%
TGTGTCTATGACGCCTATGA+TGG + chr4.3:15679951-15679970 None:intergenic 45.0%
TTGAAGCTGTGTGAGTTCCA+TGG + chr4.3:15680695-15680714 None:intergenic 45.0%
! AAAAGTGCAGCCTCTCAAAG+CGG - chr4.3:15683352-15683371 MS.gene023475:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr4.3:15683231-15683250 MS.gene023475:CDS 45.0%
! ACAGTTGGAGACAAGGTACT+AGG + chr4.3:15682175-15682194 None:intergenic 45.0%
! ACTCTTCTGGGAATGACTGA+TGG - chr4.3:15682731-15682750 MS.gene023475:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr4.3:15683230-15683249 MS.gene023475:CDS 45.0%
! CTCTTTTTACTTCCCTTGGG+TGG + chr4.3:15682805-15682824 None:intergenic 45.0%
! GAAAGAAAAGCACAATCGGC+CGG - chr4.3:15682318-15682337 MS.gene023475:CDS 45.0%
! GGAGGCCTTATATCAGAAGA+AGG - chr4.3:15683382-15683401 MS.gene023475:intron 45.0%
! GGCTATCTACAAAGCTTGCT+GGG - chr4.3:15680800-15680819 MS.gene023475:intron 45.0%
! GTTTAGGTGAGTTGGGTCTT+AGG + chr4.3:15683192-15683211 None:intergenic 45.0%
! TGATACCTTTGGAAGTTGCG+TGG + chr4.3:15680980-15680999 None:intergenic 45.0%
! TTAGGTGAGTTGGGTCTTAG+GGG + chr4.3:15683190-15683209 None:intergenic 45.0%
!! CAGTTTTTGAGGAGGGATGA+TGG + chr4.3:15679898-15679917 None:intergenic 45.0%
!! CCATGGTGCTGTATTCGAAA+CGG + chr4.3:15681045-15681064 None:intergenic 45.0%
!! CTTGCTTCTGGTTTAGCAAG+AGG - chr4.3:15680756-15680775 MS.gene023475:intron 45.0%
!! GGATTAGTCGGTTCTTGGAT+CGG + chr4.3:15681528-15681547 None:intergenic 45.0%
ACATCGCTCTCTGAGCCTTA+AGG - chr4.3:15683145-15683164 MS.gene023475:intron 50.0%
ACCAGAAGCAAGGCCTCTAT+AGG + chr4.3:15680748-15680767 None:intergenic 50.0%
ACCGTGCTAAACCAGAAGCA+AGG + chr4.3:15681559-15681578 None:intergenic 50.0%
ACTAAGTGGGGTCGGTTACA+TGG - chr4.3:15683243-15683262 MS.gene023475:CDS 50.0%
ATGTAACCGACCCCACTTAG+TGG + chr4.3:15683244-15683263 None:intergenic 50.0%
ATGTCTTGTCCTCATGTGGC+AGG - chr4.3:15682856-15682875 MS.gene023475:intron 50.0%
CAACGCGACACGATAGCAAT+TGG - chr4.3:15680948-15680967 MS.gene023475:CDS 50.0%
CAGGGACAGTCCATTGACAA+TGG - chr4.3:15681212-15681231 MS.gene023475:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr4.3:15683232-15683251 None:intergenic 50.0%
CCGTTTCGAATACAGCACCA+TGG - chr4.3:15681042-15681061 MS.gene023475:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr4.3:15683235-15683254 MS.gene023475:CDS 50.0%
GCAGACCCATTTGATATCGG+GGG - chr4.3:15683421-15683440 MS.gene023475:CDS 50.0%
GCATCAGTACAGTGTCCAAC+AGG + chr4.3:15680831-15680850 None:intergenic 50.0%
GCTAGAGATGCTATTGGCCA+TGG - chr4.3:15680675-15680694 MS.gene023475:intron 50.0%
GGAAAACTCAGCCTTGCAGT+TGG + chr4.3:15682094-15682113 None:intergenic 50.0%
GGAAGCCTAACATGGACAGA+TGG - chr4.3:15683844-15683863 MS.gene023475:CDS 50.0%
GTAAAGGAAGCTGGTGGAGT+TGG - chr4.3:15681858-15681877 MS.gene023475:CDS 50.0%
GTCCTCCCCCGATATCAAAT+GGG + chr4.3:15683429-15683448 None:intergenic 50.0%
GTGGAAGGTTTCCAACTGCA+AGG - chr4.3:15682080-15682099 MS.gene023475:CDS 50.0%
TCCTATAGAGGCCTTGCTTC+TGG - chr4.3:15681545-15681564 MS.gene023475:intron 50.0%
TCTCAAAGCGGAACTGATGG+AGG - chr4.3:15683364-15683383 MS.gene023475:intron 50.0%
TGCAGCCAAAATGTCCACAC+CGG + chr4.3:15682779-15682798 None:intergenic 50.0%
TGTAACCGACCCCACTTAGT+GGG + chr4.3:15683243-15683262 None:intergenic 50.0%
TGTCCTCCCCCGATATCAAA+TGG + chr4.3:15683430-15683449 None:intergenic 50.0%
TTGCGGCCACTACAATCGAT+AGG - chr4.3:15681075-15681094 MS.gene023475:intron 50.0%
TTGGCTGCATTTCCACCCAA+GGG - chr4.3:15682790-15682809 MS.gene023475:intron 50.0%
TTTGGCTGCATTTCCACCCA+AGG - chr4.3:15682789-15682808 MS.gene023475:intron 50.0%
! AGGTGACCAAGTTGGGTGTT+TGG + chr4.3:15682902-15682921 None:intergenic 50.0%
! AGTCATTCCCAGAAGAGTGC+AGG + chr4.3:15682729-15682748 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr4.3:15683229-15683248 MS.gene023475:CDS 50.0%
! TCCATCAGTTCCGCTTTGAG+AGG + chr4.3:15683365-15683384 None:intergenic 50.0%
!! AGGAGCACCTTTAGCTCACT+TGG - chr4.3:15680779-15680798 MS.gene023475:intron 50.0%
!! GCCTTGCTTCTGGTTTAGCA+CGG - chr4.3:15680754-15680773 MS.gene023475:intron 50.0%
!! GCTTCTGGTTTAGCAAGAGG+AGG - chr4.3:15680759-15680778 MS.gene023475:intron 50.0%
!! TGGGTCTGCTGCCTTATTTG+TGG + chr4.3:15683410-15683429 None:intergenic 50.0%
!! TTGCTTCTGGTTTAGCACGG+TGG - chr4.3:15681558-15681577 MS.gene023475:intron 50.0%
ATGGCTGCAGGTGACCAAGT+TGG + chr4.3:15682910-15682929 None:intergenic 55.0%
CACACAGCTTCAACAGCAGC+TGG - chr4.3:15680702-15680721 MS.gene023475:intron 55.0%
CCAGGGTCAGACAAGCCTTA+AGG + chr4.3:15683163-15683182 None:intergenic 55.0%
CCTTAAGGCTTGTCTGACCC+TGG - chr4.3:15683160-15683179 MS.gene023475:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr4.3:15683237-15683256 None:intergenic 55.0%
GACCCATTTGATATCGGGGG+AGG - chr4.3:15683424-15683443 MS.gene023475:CDS 55.0%
GCAGCCAAAATGTCCACACC+GGG + chr4.3:15682778-15682797 None:intergenic 55.0%
GCCGCAACTGTAATGAGCCA+TGG + chr4.3:15681062-15681081 None:intergenic 55.0%
GCCTCTCAAAGCGGAACTGA+TGG - chr4.3:15683361-15683380 MS.gene023475:intron 55.0%
GCGCATTGCACGTGATCCAT+CGG - chr4.3:15681274-15681293 MS.gene023475:CDS 55.0%
GCTGCTATTCCTGCCACATG+AGG + chr4.3:15682868-15682887 None:intergenic 55.0%
TGGATCACGTGCAATGCGCT+CGG + chr4.3:15681273-15681292 None:intergenic 55.0%
TGGCTGCAGGTGACCAAGTT+GGG + chr4.3:15682909-15682928 None:intergenic 55.0%
! AGCACCCGGTGTGGACATTT+TGG - chr4.3:15682771-15682790 MS.gene023475:intron 55.0%
GTCAGCAAATCGGCGTCGTC+CGG - chr4.3:15680041-15680060 MS.gene023475:intron 60.0%
TAGCCGGACATAGCAGCACC+CGG - chr4.3:15682757-15682776 MS.gene023475:intron 60.0%
TGATATCGGGGGAGGACACG+TGG - chr4.3:15683432-15683451 MS.gene023475:CDS 60.0%
TGGGTCTTAGGGGCTCACCA+GGG + chr4.3:15683180-15683199 None:intergenic 60.0%
TTGGGTCTTAGGGGCTCACC+AGG + chr4.3:15683181-15683200 None:intergenic 60.0%
! GCTTGCTGGGACGTTCCTGT+TGG - chr4.3:15680813-15680832 MS.gene023475:intron 60.0%
!! ACACCGGGTGCTGCTATGTC+CGG + chr4.3:15682763-15682782 None:intergenic 60.0%
GGACATAGCAGCACCCGGTG+TGG - chr4.3:15682762-15682781 MS.gene023475:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 15679218 15683921 15679218 ID=MS.gene023475
chr4.3 mRNA 15679218 15683921 15679218 ID=MS.gene023475.t1;Parent=MS.gene023475
chr4.3 exon 15683799 15683921 15683799 ID=MS.gene023475.t1.exon1;Parent=MS.gene023475.t1
chr4.3 CDS 15683799 15683921 15683799 ID=cds.MS.gene023475.t1;Parent=MS.gene023475.t1
chr4.3 exon 15683598 15683689 15683598 ID=MS.gene023475.t1.exon2;Parent=MS.gene023475.t1
chr4.3 CDS 15683598 15683689 15683598 ID=cds.MS.gene023475.t1;Parent=MS.gene023475.t1
chr4.3 exon 15683409 15683506 15683409 ID=MS.gene023475.t1.exon3;Parent=MS.gene023475.t1
chr4.3 CDS 15683409 15683506 15683409 ID=cds.MS.gene023475.t1;Parent=MS.gene023475.t1
chr4.3 exon 15683168 15683323 15683168 ID=MS.gene023475.t1.exon4;Parent=MS.gene023475.t1
chr4.3 CDS 15683168 15683323 15683168 ID=cds.MS.gene023475.t1;Parent=MS.gene023475.t1
chr4.3 exon 15681997 15682670 15681997 ID=MS.gene023475.t1.exon5;Parent=MS.gene023475.t1
chr4.3 CDS 15681997 15682670 15681997 ID=cds.MS.gene023475.t1;Parent=MS.gene023475.t1
chr4.3 exon 15681833 15681924 15681833 ID=MS.gene023475.t1.exon6;Parent=MS.gene023475.t1
chr4.3 CDS 15681833 15681924 15681833 ID=cds.MS.gene023475.t1;Parent=MS.gene023475.t1
chr4.3 exon 15681145 15681387 15681145 ID=MS.gene023475.t1.exon7;Parent=MS.gene023475.t1
chr4.3 CDS 15681145 15681387 15681145 ID=cds.MS.gene023475.t1;Parent=MS.gene023475.t1
chr4.3 exon 15680938 15681052 15680938 ID=MS.gene023475.t1.exon8;Parent=MS.gene023475.t1
chr4.3 CDS 15680938 15681052 15680938 ID=cds.MS.gene023475.t1;Parent=MS.gene023475.t1
chr4.3 exon 15680187 15680379 15680187 ID=MS.gene023475.t1.exon9;Parent=MS.gene023475.t1
chr4.3 CDS 15680187 15680379 15680187 ID=cds.MS.gene023475.t1;Parent=MS.gene023475.t1
chr4.3 exon 15679218 15679777 15679218 ID=MS.gene023475.t1.exon10;Parent=MS.gene023475.t1
chr4.3 CDS 15679218 15679777 15679218 ID=cds.MS.gene023475.t1;Parent=MS.gene023475.t1
Gene Sequence

>MS.gene023475

ATGGAAACTAATTCAGGAAACAAGAGATGTGCTAGAAAGGTTCAATTGCTTGTAACTTCAGCTCTTCTTTTACTGCAAAGCTTTCTGATCATCCCCGAGATATTTGCAGAAGAATCAAGCTCTGTGAGTCCAACTTTAGTTTGTAGTAATTGTATTCATTACACATGTCAATAAATGTGAATAATATTTCTTGTTATTTTAGCACAATAATTTATTAAATGCATGTTCCTAGGTGCATATTGTATACATGGGAGAAAAGATATATCATAATCCAGAAACTGCTAAAAAGTATCACCACAAAATGTTATCTTCACTCTTGGGAAGGTATGGCTTGTAATGATCTTCACATATTATTTTCCTAATAATTATCATTACATTAAGATGCATTAAGATGCATTTAATTTTTGTTCTGCAGCAAAGAAGATGCAAAGAATTCACTTCTTTATAGCTATAAACATGGATTTTCAGGGTTTGCTGCTAGAATGACAAAGTCCCAAGCAGAAGATATAGCAAGTATGAATATGGTCCTTACCATGATTAAGATTAGTTTTTAAACCTATTTTTAGCACTTTTTTAAAGCTATATATATACAATGTAGAGTTTCCAGAGGTAGTTTCTGTCATTCCAAATGGCATTCACAAACTTCACACAACTAGAAGTTGGGACTTCATTGGGGTCCATCATCCCTCCTCAAAAACTGTTTTCACTGAAAGCAACTTAGGTCAAGGAACCATCATAGGCGTCATAGACACAGGTACTAATCCTCTTACAAATATCCAACCAAAGCATTTGAAAATGAAAACAGATCTCATGCATTCATGCAGTCAGCAAATCGGCGTCGTCCGGTTAAGATCAGAAATTTCAGATTTCAAGCTAGTTTTTAGATATTTGTAAACACGATTTACGAACTTAAAATCTGAGTCATCCGATGAAAATCGGATGGTGCTAATTGGAAAGTGCAGATATCCAACCAAACACTAGAAAATGAAAATGGATTTCTTGCAATACGGGATCAGATGCATTCATGCTGTCAGCAATTTGGTACCGTCCAATTAAGATCAAACAACTCAGATTTCGAACAAGTTTTTAATATTTTTAAATGCGATTTACCGAGGTTAAAATATGAGTTGTCCAGTGAAAATTGGATGGTGAAGATCTGCTAATTGCATGAATGTACGAGATTCCTGACTACACAAAATCCCTAGAAAACGGCGTTGTAATGTAACCAATGATAAACTTGATTTCTTGAAGGCATTTGGCCAGAGTCTGCAAGTTTCAATGATGAAGCAATGGGAAAAATTCCATCCAAGTGGAAAGGAGTTTGTCAAGTTGGAGAAAAATTTAACTCCACAAACTGTAACAAGAAGATCATTGGTGCTAGATGGTTCCTAAAAGGAATAACTGATCACACTAAGAACCTCATCCTTGGAAACAATGACACTACAGAATATCTCTCAGCTAGAGATGCTATTGGCCATGGAACTCACACAGCTTCAACAGCAGCTGGATATTATGTAGAAAATGCAAATTATAGAGGCCTTGCTTCTGGTTTAGCAAGAGGAGGAGCACCTTTAGCTCACTTGGCTATCTACAAAGCTTGCTGGGACGTTCCTGTTGGACACTGTACTGATGCTGATATCCTCAAAGCATTTGACATGGCTATACACGATGGTGTAGATGTCTTAACTGTTTCTCTTGGCATTGGCATCCCTTTGTTTTCGTATGTTGATCAACGCGACACGATAGCAATTGGTTCTTTCCACGCAACTTCCAAAGGTATCACAGTTGTTTCTTCAGCTGGAAATTCTGGTCCTATTTCTCAAACCGTTTCGAATACAGCACCATGGCTCATTACAGTTGCGGCCACTACAATCGATAGGACTTTTCCAACAGCCATTACACTTGGAAATAACCTTACTTTGTGGGTATGCTACAACTACTTCTGTATCAAATTGGTGAAATGTGATATCAACTAACAGTTGATTGATATAATGCAGGGACAGTCCATTGACAATGGAAAACACTCTCTTGGATTTGTCGGGCTCACATACTCCGAGCGCATTGCACGTGATCCATCGGATGATTTAGCGTGAGACCTTTCTTCCTTCTTCATACACACAAACACGGGTGTGAATCTGCTTACTCTAGCAATAACTCTTTTCATATATACCCTATTTGAATTCTTCTCTAGAATAGATTAAATCTAAAAATAAAAAAAAAAAACATAAAATTTAAAAATTATTCGATACTTCATCAAATGATGCATGACCGTTGACATAATAATATTTTTTGTTGAAAACTCGGTATCCGATCCAAGAACCGACTAATCCTATAGAGGCCTTGCTTCTGGTTTAGCACGGTGGCTATACAATATTCAACGGTGGTGTTGATGAAATTCATTATTTATACAGAACTATGAAATGAAGTAACTCTGGCAAATTTTACTCTTGGAATAAGTAGGTTCATACCTAAATATATATATAAAATCTCACTTGTGTATATTTTGTATGAACTGTCTATGTCTTCCTTTGAAGTAAGGATTGTCAGTCTGGAAGTCTGAATGAAACAATGGCAGCAGGAAAAATTGTTCTATGCTTTTCAGTATCAGATCAACAAGATATTGTTTCTGCAGCACTTACAGTAAAGGAAGCTGGTGGAGTTGGACTAATATATGCACAGCGTCATGAAGATGGACTCAATGAATGTGGTATACTTCCGTGCATTAAGGTAGATTATGAAGCAGGGACACAACTGTTAACCTATATTAGAAGAGCAAGGTGAGGAAATAAATAATATGCATAGATTGACAAGATTGGCTTCTGAAATATTCATTTGAGCTGAAATTAATATTATTAAGCTCATGTGGAAGGTTTCCAACTGCAAGGCTGAGTTTTCCAAAGACTGTTATAGGAAAATGGATATCTCCAAGAGTTGCATCTTTCTCATCTAGAGGACCTAGTACCTTGTCTCCAACTGTGCTAAAGGTATAGCCCAACCTTAAAATTCTTACTTGTAGGTATGATTTATTCTATTTAACCAGATCATGTTTCTGAAATTTGAGACAAAAAGTAAATAGAGAATTGTTCGCTAGGATTCTTTAGAAAGAAAAGCACAATCGGCCGGCTATTAGTTTAAACAATTGTTTATAACAAATTATAAATTTCGTTACCTTCAACCAAACATAACAAAAAATCTTAGAATTTGGATTAAGTCTAACTCAGGTGGTTCAAGAGTTTTTGCCATATCTGTAGTATTGTAGGATGCCAACAAAATTAAATAAAAGAACAAATATATCTCAAAATAAAATTTAAAATATATGATATCAATATGTTTTCAAGGCACATGCCAGCAGAGAAGCAATATATAACGAGAAATTCGATTTGAGTGAAGGCAGAGAACTAAATAAATGTCTATTTGAGGTGCTATCTTTTAAATTATAGTAAGCAACTTACCATAAAACAAAAATATAATGATCTTACATGGTTTTCAATTTATGGTGTCATCATAACCTGCACTCTTCTGGGAATGACTGATGGAAATAGCCGGACATAGCAGCACCCGGTGTGGACATTTTGGCTGCATTTCCACCCAAGGGAAGTAAAAAGAGCAGTGGATTCATATTCTTATCTGGAACATCAATGTCTTGTCCTCATGTGGCAGGAATAGCAGCACTCATAAAATCCAAACACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGGTGAGTCAACGAACATCAACATAGTTGTTTGGTTTCTATCCATCCAAATTATCTTCAAATTTCAATTTTACTAGAAGTGACAGAAAGTAATTTTTGTGTTGGTTTAAAAATTTACACTACTTTAATATACTTTCCAAAGTAAAAATAAATAACTTCACTTCAAAATCAATTATCATCTAATCATCTCTAAGTACATCGCTCTCTGAGCCTTAAGGCTTGTCTGACCCTGGTGAGCCCCTAAGACCCAACTCACCTAAACTTTTACAACAACAACAACCAAGCCTTATCCCACTAAGTGGGGTCGGTTACATGGATCACCTAAACTTTTCTTTATAAAATAATATCATCAAATCAGTTTTACATAACCAATAATATCAAAACTAACTAGTCTCAACATTGAAAAGTGCAGCCTCTCAAAGCGGAACTGATGGAGGCCTTATATCAGAAGAAGGTTCCACAAATAAGGCAGCAGACCCATTTGATATCGGGGGAGGACACGTGGATCCTAACAAAGCAATCAATGCAGGACTCATATACAACATTACCACAGAGGATTATATCCAATTCCTATGTTCCATGGGTCATAATACAGCATCTATTAGAAAAGTGACCAAAACCACTACAAGTTGCAACAAACAAAAAAGACGAGCACTGTTGAACCTTAACCTTCCTTCCATATCAATTCCAAACCTGAAGAGTCATACAACAGTAATGAGAACAGTGACAAACGTTGGAAACATAAATGTAGTCTACAAAGCTATAGTGAATAGTCCTTATGGTATAAAAGTGAGAGTTGAACCTCAAATTTTGAACTTCAATTCAGAAATCAAAGTACTTACCTTCAACGTAAGCTTCATTTCAACTCAAAAGTTGCATGGTGATTACAGATTTGGAAGCCTAACATGGACAGATGGCAATCATTTTGTGAGGATACCAATAGCTGTTAGGACCATACAATTTGAATATTAA
Protein sequence

>MS.gene023475.t1

METNSGNKRCARKVQLLVTSALLLLQSFLIIPEIFAEESSSVHIVYMGEKIYHNPETAKKYHHKMLSSLLGSKEDAKNSLLYSYKHGFSGFAARMTKSQAEDIAKFPEVVSVIPNGIHKLHTTRSWDFIGVHHPSSKTVFTESNLGQGTIIGVIDTGIWPESASFNDEAMGKIPSKWKGVCQVGEKFNSTNCNKKIIGARWFLKGITDHTKNLILGNNDTTEYLSARDAIGHGTHTASTAAGYYVENANYRGLASGLARGGAPLAHLAIYKACWDVPVGHCTDADILKAFDMAIHDGVDVLTVSLGIGIPLFSYVDQRDTIAIGSFHATSKGITVVSSAGNSGPISQTVSNTAPWLITVAATTIDRTFPTAITLGNNLTLWGQSIDNGKHSLGFVGLTYSERIARDPSDDLAKDCQSGSLNETMAAGKIVLCFSVSDQQDIVSAALTVKEAGGVGLIYAQRHEDGLNECGILPCIKVDYEAGTQLLTYIRRARFPTARLSFPKTVIGKWISPRVASFSSRGPSTLSPTVLKPDIAAPGVDILAAFPPKGSKKSSGFIFLSGTSMSCPHVAGIAALIKSKHPTWSPAAIRSALVTTASQSGTDGGLISEEGSTNKAADPFDIGGGHVDPNKAINAGLIYNITTEDYIQFLCSMGHNTASIRKVTKTTTSCNKQKRRALLNLNLPSISIPNLKSHTTVMRTVTNVGNINVVYKAIVNSPYGIKVRVEPQILNFNSEIKVLTFNVSFISTQKLHGDYRFGSLTWTDGNHFVRIPIAVRTIQFEY