AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24719

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24719.t1 MTR_7g104200 98.099 684 13 0 4 687 63 746 0.0 1389
MS.gene24719.t1 MTR_7g075890 49.782 687 339 6 1 685 218 900 0.0 678
MS.gene24719.t1 MTR_8g033150 49.491 687 341 6 1 685 45 727 0.0 676
MS.gene24719.t1 MTR_8g033150 49.491 687 341 6 1 685 72 754 0.0 675
MS.gene24719.t1 MTR_8g079900 48.905 685 344 6 1 683 62 742 0.0 671
MS.gene24719.t1 MTR_8g079900 49.147 645 322 6 41 683 4 644 0.0 635
MS.gene24719.t1 MTR_1g048110 45.495 677 344 15 12 682 73 730 0.0 542
MS.gene24719.t1 MTR_7g034380 44.919 679 346 16 12 682 33 691 0.0 541
MS.gene24719.t1 MTR_8g006680 44.395 678 344 17 12 682 71 722 0.0 536
MS.gene24719.t1 MTR_8g005300 44.395 678 344 17 12 682 71 722 0.0 536
MS.gene24719.t1 MTR_8g005640 44.395 678 344 17 12 682 71 722 0.0 536
MS.gene24719.t1 MTR_6g055570 44.737 684 338 16 12 682 73 729 0.0 536
MS.gene24719.t1 MTR_3g010080 44.591 684 342 15 12 682 72 731 0.0 533
MS.gene24719.t1 MTR_1g006990 44.818 685 341 15 12 682 73 734 2.22e-180 531
MS.gene24719.t1 MTR_8g005710 43.560 691 353 16 8 682 29 698 7.79e-177 521
MS.gene24719.t1 MTR_1g007030 43.832 689 360 15 1 682 64 732 3.07e-175 518
MS.gene24719.t1 MTR_6g075370 43.199 669 311 11 10 671 69 675 9.22e-174 513
MS.gene24719.t1 MTR_6g055410 43.025 681 336 18 12 682 73 711 1.47e-173 513
MS.gene24719.t1 MTR_7g098070 42.179 716 361 18 4 682 62 761 2.58e-171 509
MS.gene24719.t1 MTR_4g134320 41.250 720 363 18 4 682 65 765 7.41e-166 495
MS.gene24719.t1 MTR_4g095360 41.595 702 368 17 12 682 64 754 5.64e-164 490
MS.gene24719.t1 MTR_8g042670 44.242 712 345 22 4 682 65 757 1.38e-163 489
MS.gene24719.t1 MTR_8g042710 43.115 719 358 20 4 682 56 763 3.59e-162 485
MS.gene24719.t1 MTR_1g102350 41.185 709 372 19 9 682 78 776 1.06e-161 485
MS.gene24719.t1 MTR_5g016120 41.655 701 368 19 12 681 69 759 1.19e-161 484
MS.gene24719.t1 MTR_4g053630 42.090 708 362 19 8 682 37 729 3.58e-161 482
MS.gene24719.t1 MTR_3g104930 40.446 717 368 21 9 682 61 761 5.35e-159 477
MS.gene24719.t1 MTR_8g072440 40.334 719 360 17 3 682 22 710 5.51e-159 476
MS.gene24719.t1 MTR_8g072440 40.390 718 359 17 4 682 65 752 5.71e-158 474
MS.gene24719.t1 MTR_5g025010 41.119 715 360 19 4 682 28 717 4.55e-157 471
MS.gene24719.t1 MTR_4g073540 41.160 724 360 20 9 682 60 767 7.87e-157 472
MS.gene24719.t1 MTR_5g025010 41.119 715 360 19 4 682 60 749 8.65e-157 471
MS.gene24719.t1 MTR_3g082200 38.866 723 378 17 4 682 67 769 6.22e-156 469
MS.gene24719.t1 MTR_0047s0120 40.000 700 379 15 12 680 65 754 9.82e-156 469
MS.gene24719.t1 MTR_8g022870 42.441 721 357 18 11 682 64 775 1.67e-155 469
MS.gene24719.t1 MTR_5g096750 41.621 728 345 22 4 682 68 764 1.35e-154 466
MS.gene24719.t1 MTR_4g103400 39.730 740 364 23 4 685 64 779 2.13e-153 463
MS.gene24719.t1 MTR_3g114420 40.000 710 378 20 9 682 67 764 2.48e-153 462
MS.gene24719.t1 MTR_1g018510 40.621 709 371 19 12 680 25 723 2.83e-153 461
MS.gene24719.t1 MTR_2g042130 40.000 705 376 18 12 680 77 770 7.12e-153 462
MS.gene24719.t1 MTR_3g102810 41.418 705 365 19 13 680 59 752 7.85e-153 461
MS.gene24719.t1 MTR_7g098630 40.699 715 362 19 12 683 66 761 1.77e-152 464
MS.gene24719.t1 MTR_7g081420 40.629 731 368 20 4 682 68 784 1.03e-151 459
MS.gene24719.t1 MTR_4g103480 40.659 728 367 21 4 685 81 789 4.26e-151 457
MS.gene24719.t1 MTR_7g075900 39.155 710 385 17 7 682 75 771 6.95e-151 457
MS.gene24719.t1 MTR_4g103450 40.604 729 366 21 4 685 38 746 3.51e-150 454
MS.gene24719.t1 MTR_4g103430 40.220 726 366 23 4 682 64 768 6.12e-150 454
MS.gene24719.t1 MTR_7g081750 39.519 749 369 23 4 684 67 799 2.71e-149 453
MS.gene24719.t1 MTR_4g103490 39.237 734 379 23 4 685 68 786 4.93e-149 452
MS.gene24719.t1 MTR_2g044630 40.235 681 349 19 12 682 73 705 5.24e-149 449
MS.gene24719.t1 MTR_4g053635 40.955 691 353 20 27 682 2 672 8.02e-149 448
MS.gene24719.t1 MTR_4g053630 41.955 665 338 19 51 682 3 652 3.50e-148 446
MS.gene24719.t1 MTR_8g083220 39.423 728 376 18 4 687 73 779 2.97e-147 447
MS.gene24719.t1 MTR_7g081580 39.864 735 371 22 4 684 68 785 7.16e-147 447
MS.gene24719.t1 MTR_4g103495 41.997 681 321 21 4 633 65 722 7.20e-147 446
MS.gene24719.t1 MTR_7g081500 38.889 738 374 19 4 684 67 784 1.10e-145 444
MS.gene24719.t1 MTR_4g125180 38.850 713 371 21 12 680 58 749 8.74e-145 440
MS.gene24719.t1 MTR_8g021130 40.000 715 368 21 11 680 74 772 1.15e-144 441
MS.gene24719.t1 MTR_2g018135 38.462 741 383 21 1 682 56 782 6.81e-143 436
MS.gene24719.t1 MTR_2g042640 41.667 636 294 18 16 644 46 611 1.65e-142 429
MS.gene24719.t1 MTR_8g042670 44.146 632 306 20 79 682 21 633 5.26e-142 429
MS.gene24719.t1 MTR_3g082200 39.720 642 331 16 77 682 25 646 1.32e-141 429
MS.gene24719.t1 MTR_7g081380 38.903 766 354 24 4 682 68 806 4.11e-141 432
MS.gene24719.t1 MTR_4g102400 38.484 699 376 19 12 682 80 752 7.03e-141 430
MS.gene24719.t1 MTR_2g018125 39.084 742 376 22 1 682 58 783 8.45e-141 431
MS.gene24719.t1 MTR_7g481600 38.420 734 383 19 4 684 68 785 5.49e-140 430
MS.gene24719.t1 MTR_5g011270 39.326 712 367 22 4 684 77 754 1.38e-139 427
MS.gene24719.t1 MTR_3g452290 39.631 651 302 16 39 682 2 568 3.12e-139 420
MS.gene24719.t1 MTR_3g451220 39.631 651 302 16 39 682 2 568 3.12e-139 420
MS.gene24719.t1 MTR_5g085690 37.936 746 376 22 4 683 65 789 3.23e-139 427
MS.gene24719.t1 MTR_3g061110 37.604 718 380 18 4 682 64 752 3.25e-139 426
MS.gene24719.t1 MTR_5g011320 39.604 707 367 24 9 684 71 748 4.32e-139 425
MS.gene24719.t1 MTR_5g011340 39.831 708 365 25 9 684 75 753 1.37e-138 424
MS.gene24719.t1 MTR_5g011280 39.100 711 369 23 5 683 78 756 3.34e-138 423
MS.gene24719.t1 MTR_3g082200 39.274 634 329 16 85 682 18 631 9.97e-138 418
MS.gene24719.t1 MTR_5g011310 39.266 708 369 25 9 684 78 756 2.49e-137 421
MS.gene24719.t1 MTR_5g011260 38.778 704 367 21 9 682 82 751 1.18e-136 419
MS.gene24719.t1 MTR_8g024380 38.169 710 381 16 7 682 73 758 3.53e-135 416
MS.gene24719.t1 MTR_4g103495 40.781 640 318 20 85 682 3 623 6.23e-135 410
MS.gene24719.t1 MTR_5g011190 39.149 705 371 22 9 683 78 754 7.87e-134 412
MS.gene24719.t1 MTR_3g464790 39.662 711 347 24 9 682 66 731 5.80e-133 409
MS.gene24719.t1 MTR_1g079120 37.800 709 394 17 10 687 73 765 1.73e-132 409
MS.gene24719.t1 MTR_5g011370 38.614 707 375 23 9 684 98 776 1.53e-131 407
MS.gene24719.t1 MTR_8g042710 45.336 536 258 14 4 509 56 586 3.44e-129 397
MS.gene24719.t1 MTR_5g055920 39.286 644 330 20 83 685 46 669 1.22e-128 396
MS.gene24719.t1 MTR_1g078110 37.074 704 383 14 12 682 77 753 1.70e-128 398
MS.gene24719.t1 MTR_8g024420 37.063 715 386 19 12 687 37 726 4.40e-128 396
MS.gene24719.t1 MTR_8g024390 36.555 714 393 18 12 687 71 762 3.59e-127 395
MS.gene24719.t1 MTR_3g114410 43.654 520 266 14 9 507 67 580 1.19e-125 385
MS.gene24719.t1 MTR_7g118080 36.648 704 388 19 12 682 77 755 1.19e-124 388
MS.gene24719.t1 MTR_7g079300 36.134 714 404 17 2 682 71 765 1.26e-121 380
MS.gene24719.t1 MTR_7g079310 35.376 718 404 17 2 682 69 763 1.29e-120 378
MS.gene24719.t1 MTR_2g042650 35.830 681 316 18 12 682 73 642 2.90e-120 373
MS.gene24719.t1 MTR_2g049200 35.327 719 393 16 12 687 71 760 1.38e-118 372
MS.gene24719.t1 MTR_8g024370 36.115 731 392 22 4 687 59 761 8.33e-115 362
MS.gene24719.t1 MTR_5g081100 43.981 432 196 10 10 436 36 426 1.76e-105 328
MS.gene24719.t1 MTR_4g071560 37.269 542 256 13 4 509 28 521 3.40e-99 315
MS.gene24719.t1 MTR_8g027260 49.660 294 129 5 12 303 73 349 6.55e-89 291
MS.gene24719.t1 MTR_8g027260 44.558 294 157 5 392 682 361 651 2.58e-67 233
MS.gene24719.t1 MTR_4g127480 30.458 742 424 23 13 681 90 812 7.53e-72 249
MS.gene24719.t1 MTR_5g081280 45.221 272 115 8 10 277 56 297 1.24e-70 232
MS.gene24719.t1 MTR_3g114160 41.351 370 154 10 9 363 4 325 1.19e-68 229
MS.gene24719.t1 MTR_2g037850 31.020 706 379 26 13 636 90 769 1.70e-68 240
MS.gene24719.t1 MTR_4g132620 29.484 736 430 23 13 677 92 809 2.78e-67 236
MS.gene24719.t1 MTR_2g046740 29.920 752 433 24 13 687 110 844 5.14e-65 231
MS.gene24719.t1 MTR_2g070250 41.349 341 162 12 96 432 100 406 3.48e-62 213
MS.gene24719.t1 MTR_8g089230 30.891 696 391 25 13 633 118 798 4.85e-60 217
MS.gene24719.t1 MTR_7g079295 40.345 290 163 4 2 281 70 359 1.96e-57 203
MS.gene24719.t1 MTR_7g079295 34.211 152 94 2 532 682 363 509 1.07e-17 87.0
MS.gene24719.t1 MTR_8g092940 49.528 212 97 6 10 220 26 228 6.16e-56 191
MS.gene24719.t1 MTR_4g126230 42.396 217 121 4 396 610 34 248 1.21e-42 155
MS.gene24719.t1 MTR_2g070260 41.624 197 107 5 476 669 1 192 4.53e-39 144
MS.gene24719.t1 MTR_5g081130 41.899 179 98 4 505 683 1 173 1.58e-32 125
MS.gene24719.t1 MTR_3g114140 32.817 323 191 11 338 640 105 421 6.58e-32 129
MS.gene24719.t1 MTR_3g114140 41.765 170 69 3 124 290 12 154 7.36e-30 123
MS.gene24719.t1 MTR_3g065240 27.467 375 141 10 194 565 12 258 4.29e-28 114
MS.gene24719.t1 MTR_4g053665 35.081 248 119 8 435 680 1 208 6.33e-26 106
MS.gene24719.t1 MTR_4g118440 32.411 253 120 9 434 685 1 203 2.92e-21 93.2
MS.gene24719.t1 MTR_5g044060 44.000 125 64 2 415 536 12 133 1.74e-20 89.7
MS.gene24719.t1 MTR_7g081660 33.951 162 99 3 523 684 401 554 3.17e-19 92.4
MS.gene24719.t1 MTR_8g027660 29.245 212 112 5 482 682 62 246 1.37e-12 68.6
MS.gene24719.t1 MTR_3g114400 35.593 118 68 4 568 682 50 162 6.86e-12 64.7
MS.gene24719.t1 MTR_5g011300 41.414 99 41 3 476 562 1 94 2.24e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24719.t1 AT5G03620 60.658 699 255 7 3 684 65 760 0.0 837
MS.gene24719.t1 AT4G00230 52.555 685 320 5 4 686 66 747 0.0 687
MS.gene24719.t1 AT5G03620 64.786 514 169 5 3 507 65 575 0.0 654
MS.gene24719.t1 AT5G59120 45.534 683 339 16 12 683 68 728 0.0 557
MS.gene24719.t1 AT5G59090 45.627 686 334 16 12 683 69 729 0.0 554
MS.gene24719.t1 AT5G59190 45.918 686 329 19 12 683 32 689 0.0 553
MS.gene24719.t1 AT5G59090 45.627 686 332 17 12 683 69 727 0.0 551
MS.gene24719.t1 AT5G59090 45.760 684 331 17 12 683 69 724 0.0 549
MS.gene24719.t1 AT5G58840 44.868 682 320 17 12 683 72 707 0.0 543
MS.gene24719.t1 AT5G59100 45.507 690 350 15 5 683 64 738 0.0 540
MS.gene24719.t1 AT5G58830 44.510 683 322 16 12 683 70 706 0.0 533
MS.gene24719.t1 AT4G00230 54.653 505 226 3 4 507 66 568 0.0 529
MS.gene24719.t1 AT3G46850 43.732 686 352 18 12 683 70 735 7.19e-178 525
MS.gene24719.t1 AT5G59130 43.491 699 351 16 5 687 21 691 9.13e-178 523
MS.gene24719.t1 AT5G59130 43.491 699 351 16 5 687 60 730 4.52e-177 523
MS.gene24719.t1 AT3G46840 44.315 686 347 19 12 683 71 735 1.09e-174 517
MS.gene24719.t1 AT5G59130 43.348 699 348 17 5 687 60 726 3.24e-174 515
MS.gene24719.t1 AT5G59130 42.898 697 348 15 5 687 60 720 6.31e-174 514
MS.gene24719.t1 AT5G58820 42.375 682 337 17 12 683 66 701 4.27e-168 499
MS.gene24719.t1 AT1G20160 41.867 707 363 20 12 682 28 722 6.50e-166 494
MS.gene24719.t1 AT1G20160 42.008 707 362 21 12 682 67 761 5.53e-165 493
MS.gene24719.t1 AT3G14240 41.643 718 364 17 11 682 61 769 1.96e-163 489
MS.gene24719.t1 AT2G04160 41.480 716 370 17 4 682 67 770 1.98e-161 484
MS.gene24719.t1 AT5G67360 42.023 702 364 16 12 682 65 754 1.30e-160 481
MS.gene24719.t1 AT5G59810 39.916 714 378 16 4 682 77 774 2.19e-159 479
MS.gene24719.t1 AT4G15040 42.074 675 367 13 12 683 33 686 3.76e-158 473
MS.gene24719.t1 AT4G15040 42.074 675 367 13 12 683 33 686 3.76e-158 473
MS.gene24719.t1 AT4G34980 39.972 723 377 18 4 682 49 758 2.91e-155 468
MS.gene24719.t1 AT3G14067 38.912 717 376 19 11 682 68 767 5.35e-150 454
MS.gene24719.t1 AT5G45650 40.316 759 352 26 1 682 54 788 1.71e-148 451
MS.gene24719.t1 AT5G45650 40.316 759 352 26 1 682 54 788 1.71e-148 451
MS.gene24719.t1 AT5G51750 39.716 705 382 16 12 682 79 774 6.39e-148 449
MS.gene24719.t1 AT1G20150 39.394 726 377 20 6 682 59 770 3.55e-147 447
MS.gene24719.t1 AT5G58840 46.507 501 222 11 12 507 72 531 1.30e-142 427
MS.gene24719.t1 AT2G05920 39.437 710 383 19 4 680 52 747 1.62e-142 434
MS.gene24719.t1 AT1G04110 38.732 710 386 20 12 682 71 770 1.22e-141 433
MS.gene24719.t1 AT1G01900 38.494 704 389 14 12 682 79 771 3.31e-140 429
MS.gene24719.t1 AT4G10540 39.237 734 361 25 4 682 60 763 3.40e-140 429
MS.gene24719.t1 AT4G10550 38.199 733 369 23 4 682 8 710 5.36e-138 422
MS.gene24719.t1 AT4G10550 38.199 733 369 23 4 682 8 710 5.36e-138 422
MS.gene24719.t1 AT4G10550 38.199 733 369 23 4 682 64 766 1.90e-137 422
MS.gene24719.t1 AT4G10550 38.199 733 369 23 4 682 80 782 4.40e-137 422
MS.gene24719.t1 AT1G32960 38.934 732 366 23 4 682 62 765 1.08e-135 417
MS.gene24719.t1 AT1G32940 37.772 736 369 24 4 682 8 711 2.33e-131 404
MS.gene24719.t1 AT1G32940 37.772 736 369 24 4 682 8 711 2.33e-131 404
MS.gene24719.t1 AT4G10510 37.945 730 374 24 4 682 8 709 7.13e-131 403
MS.gene24719.t1 AT1G32940 37.636 736 370 24 4 682 59 762 8.17e-131 405
MS.gene24719.t1 AT4G10520 37.187 718 380 23 4 682 59 744 1.03e-130 404
MS.gene24719.t1 AT1G66220 36.769 718 375 21 4 682 67 744 1.38e-130 404
MS.gene24719.t1 AT4G10510 37.945 730 374 24 4 682 52 753 2.24e-130 403
MS.gene24719.t1 AT4G10510 37.945 730 374 24 4 682 64 765 4.19e-130 403
MS.gene24719.t1 AT4G26330 37.449 737 377 22 4 683 13 722 3.31e-129 399
MS.gene24719.t1 AT4G10510 37.812 722 370 24 12 682 1 694 9.42e-129 397
MS.gene24719.t1 AT1G32950 38.692 734 364 23 4 682 8 710 1.69e-127 394
MS.gene24719.t1 AT1G32950 38.692 734 364 23 4 682 59 761 3.48e-127 395
MS.gene24719.t1 AT4G21650 36.499 737 369 24 1 682 68 760 7.06e-126 392
MS.gene24719.t1 AT2G39850 36.732 716 397 22 11 683 64 766 1.15e-125 391
MS.gene24719.t1 AT4G21630 36.389 731 373 21 1 682 66 753 1.72e-125 390
MS.gene24719.t1 AT4G26330 36.751 751 377 23 4 683 13 736 2.29e-125 390
MS.gene24719.t1 AT1G66210 36.401 728 377 20 4 687 70 755 3.06e-125 390
MS.gene24719.t1 AT5G11940 36.806 720 380 21 4 682 67 752 5.88e-125 389
MS.gene24719.t1 AT4G21640 35.734 736 343 23 1 682 68 727 8.23e-121 377
MS.gene24719.t1 AT4G10530 35.270 723 378 24 4 682 59 735 5.27e-118 370
MS.gene24719.t1 AT4G21323 37.570 716 374 24 4 680 110 791 5.21e-117 369
MS.gene24719.t1 AT5G67090 35.704 689 387 16 9 671 57 715 7.59e-117 367
MS.gene24719.t1 AT4G21326 36.490 718 381 22 3 682 7 687 2.05e-116 365
MS.gene24719.t1 AT5G45640 35.279 754 379 23 9 682 27 751 3.81e-115 363
MS.gene24719.t1 AT5G58840 45.349 430 189 11 12 436 72 460 3.41e-111 344
MS.gene24719.t1 AT1G20160 43.487 476 239 14 12 461 67 538 1.60e-110 345
MS.gene24719.t1 AT1G32940 38.225 552 271 18 4 509 59 586 5.74e-103 327
MS.gene24719.t1 AT1G32970 36.377 679 347 24 49 682 84 722 1.13e-101 327
MS.gene24719.t1 AT4G30020 31.250 704 382 24 13 636 86 767 8.53e-78 265
MS.gene24719.t1 AT4G30020 31.250 704 382 24 13 636 86 767 8.53e-78 265
MS.gene24719.t1 AT4G30020 31.250 704 382 24 13 636 86 767 8.53e-78 265
MS.gene24719.t1 AT4G30020 31.250 704 382 24 13 636 86 767 8.53e-78 265
MS.gene24719.t1 AT2G19170 31.294 703 386 22 13 638 86 768 4.61e-76 261
MS.gene24719.t1 AT2G19170 31.294 703 386 22 13 638 86 768 4.61e-76 261
MS.gene24719.t1 AT1G30600 31.108 704 390 22 13 639 98 783 6.73e-67 236
MS.gene24719.t1 AT5G44530 30.398 704 384 26 13 633 106 786 2.39e-66 234
MS.gene24719.t1 AT4G20430 28.666 757 426 27 13 682 119 848 9.31e-63 224
MS.gene24719.t1 AT4G20430 28.666 757 426 27 13 682 119 848 9.31e-63 224
MS.gene24719.t1 AT5G44530 29.355 729 384 27 13 633 106 811 1.28e-61 221
MS.gene24719.t1 AT4G20430 28.649 733 433 23 13 682 119 824 2.83e-59 214
MS.gene24719.t1 AT1G62340 28.329 706 400 22 13 633 98 782 1.41e-56 206
MS.gene24719.t1 AT5G44530 29.960 494 290 15 13 451 106 598 9.43e-42 161
MS.gene24719.t1 AT1G32980 40.212 189 95 5 472 649 3 184 3.35e-30 118
MS.gene24719.t1 AT5G59110 40.491 163 92 4 523 683 8 167 4.82e-30 117

Find 200 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATATGTAAACAGGTATT+TGG 0.132778 7.4:-7275310 MS.gene24719:intron
GCACCAAGACCTGTCATTTA+AGG 0.156602 7.4:-7272514 MS.gene24719:CDS
TTAGTAAACTTTAATGTATC+TGG 0.161554 7.4:+7272540 None:intergenic
TGGGATTTCTCTTCACCTTT+AGG 0.181186 7.4:+7275450 None:intergenic
CCCTGTTAGTGATGCCAATT+TGG 0.195394 7.4:+7273365 None:intergenic
GGGATTTCTCTTCACCTTTA+GGG 0.198511 7.4:+7275451 None:intergenic
TGATGCAGTGGTTGTGATTA+TGG 0.212133 7.4:-7273946 MS.gene24719:intron
CTTTCCATAGCTATGTATTA+TGG 0.223642 7.4:+7275742 None:intergenic
TGTAGTTTGTGGTATGTATT+TGG 0.223750 7.4:+7275506 None:intergenic
GTGAGAGGTGCAAGTCTTTA+TGG 0.245658 7.4:-7274868 MS.gene24719:CDS
ATTTCATAACGTGTGTCTTC+AGG 0.255433 7.4:+7273339 None:intergenic
TCCAAATTGGCATCACTAAC+AGG 0.260980 7.4:-7273366 MS.gene24719:CDS
TTGGTGATGGAAAGAAAATT+AGG 0.262814 7.4:-7274501 MS.gene24719:CDS
ACTAGCTGCTTATTCCAAAT+TGG 0.273514 7.4:-7273379 MS.gene24719:CDS
ACTAGCATTGGTATCCTTAT+TGG 0.293478 7.4:-7272765 MS.gene24719:CDS
ATAGAAAGTCACATCATTAT+AGG 0.297605 7.4:-7275425 MS.gene24719:CDS
TGCTCCTCCTAACTCTTTAA+TGG 0.306979 7.4:+7273852 None:intergenic
CCCTGATCATCCACCGGACT+TGG 0.310700 7.4:+7274931 None:intergenic
ACAAGGTCGTGGGATTTCTT+AGG 0.320974 7.4:-7275479 MS.gene24719:CDS
AAACCCCTCATCATTGAAAC+TGG 0.321241 7.4:+7275277 None:intergenic
GTCTTCTTCAAGTCCTACTA+TGG 0.327750 7.4:+7273825 None:intergenic
CCCAAGTCCGGTGGATGATC+AGG 0.334709 7.4:-7274932 MS.gene24719:CDS
TCCTCCATCACAGTTATTCC+AGG 0.340840 7.4:-7273793 MS.gene24719:CDS
AAATATGTAAACAGGTATTT+GGG 0.347471 7.4:-7275309 MS.gene24719:intron
GTTCTCACTTCTTGCTCTGC+TGG 0.348609 7.4:-7274625 MS.gene24719:CDS
GATTCAGCAACTCCAATAAA+AGG 0.359569 7.4:-7272921 MS.gene24719:intron
CAACGACAATTTCACAGAAC+TGG 0.364643 7.4:-7272898 MS.gene24719:CDS
CATTATCTGCATTACTTGAA+TGG 0.366463 7.4:-7272452 MS.gene24719:CDS
AGTTTCAATGATGAGGGGTT+TGG 0.367488 7.4:-7275275 MS.gene24719:CDS
CTGACATTGGAGGCCCCTTC+AGG 0.375651 7.4:+7272487 None:intergenic
TGAAATGCTCCAATGGCAAT+TGG 0.375761 7.4:+7274664 None:intergenic
TTCTCTGACCCAATTGCCAT+TGG 0.377276 7.4:-7274673 MS.gene24719:CDS
AACTGCAGAAATACTAGAAC+TGG 0.382424 7.4:+7272653 None:intergenic
TTTGCACAGGAAGGCAATAT+AGG 0.382444 7.4:+7272803 None:intergenic
AACCTTAGTGGAGATGAATA+TGG 0.384596 7.4:-7274081 MS.gene24719:CDS
TGGTGATGGAAAGAAAATTA+GGG 0.391772 7.4:-7274500 MS.gene24719:intron
AGTGACATGGACATGCTTGC+TGG 0.400168 7.4:-7274766 MS.gene24719:CDS
TTTACAACACAAGTAGCATT+TGG 0.400507 7.4:-7274520 MS.gene24719:CDS
TAGTTGATTCCATCAGTTCC+TGG 0.411203 7.4:+7272705 None:intergenic
ATTGCAGCAGGACTCCAGTC+AGG 0.424867 7.4:+7273240 None:intergenic
GATGCAGTGGTTGTGATTAT+GGG 0.425492 7.4:-7273945 MS.gene24719:intron
CGTCTTGCTGCTAACCTTAG+TGG 0.427720 7.4:-7274093 MS.gene24719:CDS
TTAAATCCTTTCACCCTGAC+TGG 0.434114 7.4:-7273254 MS.gene24719:CDS
AATCCTGGTGCAGCCAAGTC+AGG 0.434354 7.4:+7273408 None:intergenic
TTGCAATGTATAAAGTTTGT+TGG 0.435792 7.4:-7274801 MS.gene24719:CDS
GTTTCAATTGCAGCGGCGTT+AGG 0.439318 7.4:-7272734 MS.gene24719:CDS
TTTCATAACGTGTGTCTTCA+GGG 0.447144 7.4:+7273340 None:intergenic
TGACTTGGCTGCACCAGGAT+TGG 0.447996 7.4:-7273406 MS.gene24719:CDS
CCAGGATGCAATGCTTTCAA+TGG 0.450017 7.4:+7272852 None:intergenic
TCATTTAAGGTTGTCCTGAA+GGG 0.450348 7.4:-7272501 MS.gene24719:CDS
TAGTAAACTTTAATGTATCT+GGG 0.452354 7.4:+7272541 None:intergenic
AAATACTAGAACTGGAACTT+AGG 0.452627 7.4:+7272661 None:intergenic
TCTTGCTCTGCTGGAAATGA+TGG 0.453897 7.4:-7274616 MS.gene24719:CDS
ATTCCATCAGTTCCTGGTGC+AGG 0.455871 7.4:+7272711 None:intergenic
TACAGGACTGTGACTAATGT+AGG 0.457599 7.4:-7272627 MS.gene24719:CDS
AGCTATGGAAAGAGCTTCAA+TGG 0.457782 7.4:-7275731 MS.gene24719:CDS
GACTTGACCATTAAAGAGTT+AGG 0.458059 7.4:-7273859 MS.gene24719:CDS
TTCCATATTCATCTCCACTA+AGG 0.462155 7.4:+7274079 None:intergenic
CCGTTGAGAATGTTGCTCCT+TGG 0.462353 7.4:-7274579 MS.gene24719:CDS
GTCACGTGACGGCCCACCTA+TGG 0.464005 7.4:+7274699 None:intergenic
ATGGAAAGGCAAGTGTGTAC+AGG 0.464265 7.4:-7275237 MS.gene24719:CDS
AGTCTTTATGGCATTGGTAA+AGG 0.464267 7.4:-7274856 MS.gene24719:CDS
AATTTCACAGAACTGGGATC+AGG 0.465482 7.4:-7272891 MS.gene24719:CDS
TTCTTGCACAGCAAGGTGAT+AGG 0.465701 7.4:-7275000 MS.gene24719:intron
GTCATTTAAGGTTGTCCTGA+AGG 0.466573 7.4:-7272502 MS.gene24719:CDS
GGAAGGATAGTGTATTGTGC+TGG 0.469555 7.4:-7273898 MS.gene24719:CDS
TGCTGATGGGACACCACCAC+GGG 0.471649 7.4:+7274828 None:intergenic
ACCTTGTTGTGTGTAGTTTG+TGG 0.474165 7.4:+7275495 None:intergenic
ATTAAAGAGTTAGGAGGAGC+AGG 0.474999 7.4:-7273850 MS.gene24719:CDS
TACTTCAACCTCGACCCATC+TGG 0.476590 7.4:-7274970 MS.gene24719:CDS
ATGATGTGACTTTCTATGTT+GGG 0.478999 7.4:+7275431 None:intergenic
ACTGTGACTAATGTAGGATA+TGG 0.481193 7.4:-7272621 MS.gene24719:CDS
TATAAAGTTTGTTGGACCAT+TGG 0.481261 7.4:-7274793 MS.gene24719:CDS
GAAATGCTCCAATGGCAATT+GGG 0.482724 7.4:+7274665 None:intergenic
ATCAAATCAACATGAAAGAA+AGG 0.485074 7.4:-7276148 None:intergenic
AATGATGTGACTTTCTATGT+TGG 0.490541 7.4:+7275430 None:intergenic
ATAAAGTTTGTTGGACCATT+GGG 0.492189 7.4:-7274792 MS.gene24719:CDS
TACATTGCAACACGTGCTGA+TGG 0.493494 7.4:+7274814 None:intergenic
TATAATATCAGGAACATCAA+TGG 0.494377 7.4:-7273310 MS.gene24719:CDS
AAGCCTGACTTGGCTGCACC+AGG 0.496076 7.4:-7273411 MS.gene24719:CDS
GGATTTCTCTTCACCTTTAG+GGG 0.498520 7.4:+7275452 None:intergenic
TGCACCTCTCACCACTGATC+CGG 0.498573 7.4:+7274879 None:intergenic
AGGGCAGATTTAATTGCAGC+AGG 0.504168 7.4:+7273228 None:intergenic
ACAGAACTGGGATCAGGGTC+AGG 0.507466 7.4:-7272885 MS.gene24719:CDS
CGTTGTATCCTTGTTTGCAC+AGG 0.509321 7.4:+7272790 None:intergenic
GGTGCAAGTCTTTATGGCAT+TGG 0.511924 7.4:-7274862 MS.gene24719:CDS
CAACCTTAAATGACAGGTCT+TGG 0.512188 7.4:+7272511 None:intergenic
CAGGATGCAATGCTTTCAAT+GGG 0.514364 7.4:+7272853 None:intergenic
ATGACCACCTTGAGGATGTT+GGG 0.520061 7.4:+7273506 None:intergenic
AACCATCGAAAACCCAAGTC+CGG 0.520618 7.4:-7274944 MS.gene24719:CDS
GGAGGAGCAGGAACCATAGT+AGG 0.520914 7.4:-7273838 MS.gene24719:CDS
TGCCCCAGTTTCAATGATGA+GGG 0.523238 7.4:-7275281 MS.gene24719:CDS
CCTGATCATCCACCGGACTT+GGG 0.524338 7.4:+7274932 None:intergenic
CACACTTCGTCGACAGCGGC+CGG 0.525077 7.4:-7274898 MS.gene24719:CDS
AAAGAAGCAAGATATGGAGC+AGG 0.525864 7.4:+7273557 None:intergenic
TTTCTTAGGAATGCCCCTAA+AGG 0.529837 7.4:-7275465 MS.gene24719:CDS
AGGAGCTGGATATGCATGGT+AGG 0.529870 7.4:+7272681 None:intergenic
AGGACTCCAGTCAGGGTGAA+AGG 0.530590 7.4:+7273248 None:intergenic
CATTTAAGGTTGTCCTGAAG+GGG 0.534393 7.4:-7272500 MS.gene24719:CDS
TTTCGATGGTTGGACCAGAT+GGG 0.536482 7.4:+7274956 None:intergenic
CATGCTTGCTGGCTTTGATG+AGG 0.537660 7.4:-7274755 MS.gene24719:CDS
GGATACAACGGCACTAGCAT+TGG 0.538859 7.4:-7272777 MS.gene24719:CDS
TTTGATGAGGCCATTGCTGA+TGG 0.539111 7.4:-7274742 MS.gene24719:CDS
TGGAAAGGCAAGTGTGTACA+GGG 0.540717 7.4:-7275236 MS.gene24719:CDS
TGTAGTTTCTCTGCTTCATG+TGG 0.542466 7.4:+7275689 None:intergenic
GAATGCAGAGGAGGAGAATG+TGG 0.543127 7.4:-7275540 MS.gene24719:intron
TTTGTTGATATGTATACTGT+AGG 0.545461 7.4:-7273766 MS.gene24719:CDS
GAAGGATAGTGTATTGTGCT+GGG 0.547613 7.4:-7273897 MS.gene24719:CDS
GTACAGGGAGGCAACTTCAC+AGG 0.549460 7.4:-7275221 MS.gene24719:CDS
AGCGGCGTTAGGCCTGCACC+AGG 0.549608 7.4:-7272723 MS.gene24719:CDS
GCAGCTAGTATGTCCAATCC+TGG 0.549656 7.4:+7273393 None:intergenic
TACATATCAACAAATGCCCC+TGG 0.550084 7.4:+7273775 None:intergenic
CACTTGCCTTTCCATCTACG+TGG 0.551539 7.4:+7275245 None:intergenic
GTCGACAGCGGCCGGATCAG+TGG 0.551755 7.4:-7274890 MS.gene24719:CDS
TGGGACTCTAGACAAGGATA+AGG 0.554854 7.4:-7273926 MS.gene24719:CDS
AAATCCATAATACATAGCTA+TGG 0.555485 7.4:-7275746 MS.gene24719:CDS
TTGCCCCAGTTTCAATGATG+AGG 0.556226 7.4:-7275282 MS.gene24719:CDS
TTCATATCAGTGTCCATAGG+TGG 0.556330 7.4:-7274712 MS.gene24719:CDS
GACCATTGGGTGCAGTGACA+TGG 0.557791 7.4:-7274779 MS.gene24719:CDS
ACTCTTTAATGGTCAAGTCC+TGG 0.558223 7.4:+7273863 None:intergenic
TGGTTGGACCAGATGGGTCG+AGG 0.559021 7.4:+7274962 None:intergenic
TAGAACTGGAACTTAGGAGC+TGG 0.559665 7.4:+7272667 None:intergenic
CATAGCATGAAATGCTCCAA+TGG 0.560526 7.4:+7274657 None:intergenic
TCTAGACAAGGATAAGGTGA+TGG 0.560690 7.4:-7273920 MS.gene24719:CDS
AGCAAAAGTTTCAATTGCAG+CGG 0.561400 7.4:-7272741 MS.gene24719:CDS
AATATGTATCCACTGACTAG+TGG 0.562770 7.4:-7274117 MS.gene24719:CDS
AACCCCTCATCATTGAAACT+GGG 0.564334 7.4:+7275278 None:intergenic
ATTGCCTTCCTGTGCAAACA+AGG 0.565493 7.4:-7272798 MS.gene24719:CDS
TTGCCTTACCAGTGGTCATG+AGG 0.566398 7.4:+7273208 None:intergenic
AACATAAGCAGCAGCCGCAA+TGG 0.567185 7.4:+7273275 None:intergenic
AGGCCTGCACCAGGAACTGA+TGG 0.568050 7.4:-7272714 MS.gene24719:CDS
AAATCTGCCCTCATGACCAC+TGG 0.569019 7.4:-7273216 MS.gene24719:intron
AACGACAATTTCACAGAACT+GGG 0.569495 7.4:-7272897 MS.gene24719:CDS
GCATTTCATGCTATGAAAAG+AGG 0.570210 7.4:-7274649 MS.gene24719:CDS
CCTCCATCACAGTTATTCCA+GGG 0.571163 7.4:-7273792 MS.gene24719:CDS
CCATTGAAAGCATTGCATCC+TGG 0.572938 7.4:-7272852 MS.gene24719:CDS
ACATTGCAACACGTGCTGAT+GGG 0.573410 7.4:+7274815 None:intergenic
TCAGGACAACCTTAAATGAC+AGG 0.575594 7.4:+7272505 None:intergenic
ACATTCACTGAAAGACCCTC+AGG 0.576344 7.4:+7272567 None:intergenic
GTCCATGTCACTGCACCCAA+TGG 0.576522 7.4:+7274777 None:intergenic
CCAAGTCCGGTGGATGATCA+GGG 0.579411 7.4:-7274931 MS.gene24719:CDS
ATTTCACAGAACTGGGATCA+GGG 0.581756 7.4:-7272890 MS.gene24719:CDS
CCATGGCCCTGATCATCCAC+CGG 0.581894 7.4:+7274925 None:intergenic
GCAACATTCTCAACGGACAT+TGG 0.582348 7.4:+7274586 None:intergenic
CTAGACAAGGATAAGGTGAT+GGG 0.582364 7.4:-7273919 MS.gene24719:CDS
TTCTCAACGGACATTGGTCG+AGG 0.583754 7.4:+7274592 None:intergenic
AACTACACACAACAAGGTCG+TGG 0.584135 7.4:-7275490 MS.gene24719:CDS
GTTGGCTTAAAGACAACTAT+CGG 0.589169 7.4:+7272402 None:intergenic
GTATCCTTGTTTGCACAGGA+AGG 0.589248 7.4:+7272794 None:intergenic
CCAAATTGGCATCACTAACA+GGG 0.590617 7.4:-7273365 MS.gene24719:CDS
TGCCTTACCAGTGGTCATGA+GGG 0.590969 7.4:+7273209 None:intergenic
GAGATGAATATGGAAATCCT+AGG 0.591755 7.4:-7274071 MS.gene24719:intron
GATGACCACCTTGAGGATGT+TGG 0.591835 7.4:+7273505 None:intergenic
CCGGTGGATGATCAGGGCCA+TGG 0.593769 7.4:-7274925 MS.gene24719:CDS
CATGAAGCAGAGAAACTACA+AGG 0.599441 7.4:-7275686 MS.gene24719:intron
CTTGCCTTTCCATCTACGTG+GGG 0.600446 7.4:+7275247 None:intergenic
ATATGGAACTTCAACATACA+AGG 0.600853 7.4:-7272604 MS.gene24719:CDS
GCAGCAGCCGCAATGGCATG+TGG 0.601493 7.4:+7273282 None:intergenic
TCGACGAAGTGTGAGTGCCA+TGG 0.601619 7.4:+7274908 None:intergenic
GAAGTTGACACCATCAGCAA+TGG 0.602530 7.4:+7274732 None:intergenic
GGAGCTGGATATGCATGGTA+GGG 0.606302 7.4:+7272682 None:intergenic
GTGCTGATGGGACACCACCA+CGG 0.607613 7.4:+7274827 None:intergenic
GACTTGTATATAACAGCTTG+AGG 0.608853 7.4:+7273596 None:intergenic
GGCTAAAGTCACAGCACCTG+AGG 0.609724 7.4:-7272583 MS.gene24719:CDS
TTGACCATTAAAGAGTTAGG+AGG 0.610343 7.4:-7273856 MS.gene24719:CDS
GCCCCAGTTTCAATGATGAG+GGG 0.610977 7.4:-7275280 MS.gene24719:CDS
CTCCATCACAGTTATTCCAG+GGG 0.615028 7.4:-7273791 MS.gene24719:CDS
ACTTGCCTTTCCATCTACGT+GGG 0.617114 7.4:+7275246 None:intergenic
ATTATAGGCGTGTTAGACAC+AGG 0.617978 7.4:-7275410 MS.gene24719:intron
TGCCCCTGGAATAACTGTGA+TGG 0.618071 7.4:+7273789 None:intergenic
GCAGCAACAGTCATAATCCA+AGG 0.619322 7.4:+7274562 None:intergenic
ACCCCTCATCATTGAAACTG+GGG 0.621480 7.4:+7275279 None:intergenic
ACACAAGTAGCATTTGGTGA+TGG 0.621739 7.4:-7274514 MS.gene24719:CDS
TGTAAATTGTCTATCAACAG+TGG 0.624463 7.4:+7274537 None:intergenic
CATCGAAAACCCAAGTCCGG+TGG 0.627252 7.4:-7274941 MS.gene24719:CDS
CTAATGTCATAAATTAGACC+AGG 0.627299 7.4:+7272834 None:intergenic
GCTAAAGTCACAGCACCTGA+GGG 0.627455 7.4:-7272582 MS.gene24719:CDS
TCATATCAGTGTCCATAGGT+GGG 0.631485 7.4:-7274711 MS.gene24719:CDS
TTGCAGCAGGACTCCAGTCA+GGG 0.631775 7.4:+7273241 None:intergenic
AAGAAGCAAGATATGGAGCA+GGG 0.631959 7.4:+7273558 None:intergenic
AAGGATAGTGTATTGTGCTG+GGG 0.633528 7.4:-7273896 MS.gene24719:CDS
ACAAGGATAAGGTGATGGGA+AGG 0.635422 7.4:-7273915 MS.gene24719:CDS
ACTACACACAACAAGGTCGT+GGG 0.635913 7.4:-7275489 MS.gene24719:CDS
AACTTCATATCAGTGTCCAT+AGG 0.638247 7.4:-7274715 MS.gene24719:CDS
CACTCACACTTCGTCGACAG+CGG 0.640395 7.4:-7274902 MS.gene24719:CDS
GGCATGTCCACATGCCATTG+CGG 0.641904 7.4:-7273289 MS.gene24719:CDS
CCCTGGAATAACTGTGATGG+AGG 0.645972 7.4:+7273792 None:intergenic
GCAAGACGTCCACTAGTCAG+TGG 0.646261 7.4:+7274108 None:intergenic
ACCACAAACTACACACAACA+AGG 0.646308 7.4:-7275496 MS.gene24719:CDS
GCGGCCGGATCAGTGGTGAG+AGG 0.649550 7.4:-7274883 MS.gene24719:CDS
AATCACTCCCAACATCCTCA+AGG 0.649562 7.4:-7273513 MS.gene24719:intron
AGGATAGTGTATTGTGCTGG+GGG 0.655004 7.4:-7273895 MS.gene24719:CDS
ACTTAGGAGCTGGATATGCA+TGG 0.655501 7.4:+7272677 None:intergenic
CCAAGGAGCAACATTCTCAA+CGG 0.668400 7.4:+7274579 None:intergenic
TTGCCTTTCCATCTACGTGG+GGG 0.680101 7.4:+7275248 None:intergenic
CTGTGCAAACAAGGATACAA+CGG 0.689329 7.4:-7272789 MS.gene24719:CDS
TGATTATGGGACTCTAGACA+AGG 0.700390 7.4:-7273932 MS.gene24719:CDS
ATTGGTAAAGGCAATGCCCG+TGG 0.700597 7.4:-7274844 MS.gene24719:CDS
GGTAAAGGCAATGCCCGTGG+TGG 0.721680 7.4:-7274841 MS.gene24719:CDS
AAAGGCAAGTGTGTACAGGG+AGG 0.755011 7.4:-7275233 MS.gene24719:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATAATCATAATTATTAT+TGG + chr7.4:7272955-7272974 None:intergenic 10.0%
!!! GAAATTTTTAATATAATATC+AGG - chr7.4:7275211-7275230 MS.gene24719:intron 10.0%
!! AAATTCACATCAATTATTAT+AGG + chr7.4:7272451-7272470 None:intergenic 15.0%
!! AATTATGATTATACATATTG+TGG - chr7.4:7272960-7272979 MS.gene24719:intron 15.0%
!! TATTAAAGAAGGTAATAAAA+TGG + chr7.4:7272613-7272632 None:intergenic 15.0%
!! AAATATGTAAACAGGTATTT+GGG - chr7.4:7273223-7273242 MS.gene24719:CDS 20.0%
!! AAGGAAATATATGATATGAA+GGG - chr7.4:7272916-7272935 MS.gene24719:CDS 20.0%
!! ATATCATTAACTTTGATTGT+TGG - chr7.4:7274500-7274519 MS.gene24719:intron 20.0%
!! TAGTAAACTTTAATGTATCT+GGG + chr7.4:7275994-7276013 None:intergenic 20.0%
!! TATATATTGAATTCTCGTAT+AGG - chr7.4:7272655-7272674 MS.gene24719:CDS 20.0%
!! TCTACCTTAAAAATTTATGT+AGG + chr7.4:7275547-7275566 None:intergenic 20.0%
!! TTAGTAAACTTTAATGTATC+TGG + chr7.4:7275995-7276014 None:intergenic 20.0%
!!! AAATAAAATACAGTATTGAG+TGG - chr7.4:7275391-7275410 MS.gene24719:intron 20.0%
!!! ATTCATATTGATTATAGATG+AGG + chr7.4:7275353-7275372 None:intergenic 20.0%
!!! ATTTTGATTTGTACTATGTA+GGG - chr7.4:7274361-7274380 MS.gene24719:intron 20.0%
!!! GAAACCTACATAAATTTTTA+AGG - chr7.4:7275540-7275559 MS.gene24719:intron 20.0%
!!! TATTTTGATTTGTACTATGT+AGG - chr7.4:7274360-7274379 MS.gene24719:intron 20.0%
!!! TCTTGATAATAAGATTACAA+AGG - chr7.4:7274541-7274560 MS.gene24719:CDS 20.0%
!!! TTTCAATTAACATCACTTTT+TGG + chr7.4:7273414-7273433 None:intergenic 20.0%
! AAATCCATAATACATAGCTA+TGG - chr7.4:7272786-7272805 MS.gene24719:CDS 25.0%
! AAGCTATTTGTAACATTGTA+AGG + chr7.4:7274337-7274356 None:intergenic 25.0%
! AATAAGATTACAAAGGTTTG+AGG - chr7.4:7274548-7274567 MS.gene24719:CDS 25.0%
! AGCTATTTGTAACATTGTAA+GGG + chr7.4:7274336-7274355 None:intergenic 25.0%
! AGTTTAAATCAAATCAACCT+TGG + chr7.4:7273508-7273527 None:intergenic 25.0%
! ATAGAAAGTCACATCATTAT+AGG - chr7.4:7273107-7273126 MS.gene24719:intron 25.0%
! CAAGGAAATATATGATATGA+AGG - chr7.4:7272915-7272934 MS.gene24719:CDS 25.0%
! CAATGATGAAATATGTAAAC+AGG - chr7.4:7273215-7273234 MS.gene24719:intron 25.0%
! GAAATATGTAAACAGGTATT+TGG - chr7.4:7273222-7273241 MS.gene24719:CDS 25.0%
! TAAGAATAATAACCATACCT+AGG + chr7.4:7274481-7274500 None:intergenic 25.0%
! TATAATATCAGGAACATCAA+TGG - chr7.4:7275222-7275241 MS.gene24719:CDS 25.0%
! TTGAAATCATTACTTTCCAA+TGG + chr7.4:7272575-7272594 None:intergenic 25.0%
! TTGAGTGGTAGTTAAATTTA+TGG - chr7.4:7275406-7275425 MS.gene24719:intron 25.0%
! TTGCAATGTATAAAGTTTGT+TGG - chr7.4:7273731-7273750 MS.gene24719:intron 25.0%
! TTTGTTGATATGTATACTGT+AGG - chr7.4:7274766-7274785 MS.gene24719:CDS 25.0%
!! TAATTTTGCTAGGCTTAAAA+AGG - chr7.4:7272880-7272899 MS.gene24719:CDS 25.0%
AAATACTAGAACTGGAACTT+AGG + chr7.4:7275874-7275893 None:intergenic 30.0%
AATGATGTGACTTTCTATGT+TGG + chr7.4:7273105-7273124 None:intergenic 30.0%
AATGCAATTTGACTCAATGT+TGG - chr7.4:7274082-7274101 MS.gene24719:CDS 30.0%
AATTCATCACATTGTCCAAT+TGG + chr7.4:7274859-7274878 None:intergenic 30.0%
AATTTAATTGAATGCAGAGG+AGG - chr7.4:7272983-7273002 MS.gene24719:intron 30.0%
ACACTCTTATATTGCTTGTA+TGG + chr7.4:7273388-7273407 None:intergenic 30.0%
ACAGCCATATATTGTATACA+TGG - chr7.4:7272483-7272502 MS.gene24719:CDS 30.0%
ACGTTGTTCCATACTAATAT+GGG + chr7.4:7272530-7272549 None:intergenic 30.0%
ATATGGAACTTCAACATACA+AGG - chr7.4:7275928-7275947 MS.gene24719:intron 30.0%
ATGATGTGACTTTCTATGTT+GGG + chr7.4:7273104-7273123 None:intergenic 30.0%
ATTCATCACATTGTCCAATT+GGG + chr7.4:7274858-7274877 None:intergenic 30.0%
CAATCTCTCCAATTAAATCT+CGG - chr7.4:7274207-7274226 MS.gene24719:intron 30.0%
CAGCCATATATTGTATACAT+GGG - chr7.4:7272484-7272503 MS.gene24719:CDS 30.0%
CATTATCTGCATTACTTGAA+TGG - chr7.4:7276080-7276099 MS.gene24719:intron 30.0%
CTAATGTCATAAATTAGACC+AGG + chr7.4:7275701-7275720 None:intergenic 30.0%
CTTTCCATAGCTATGTATTA+TGG + chr7.4:7272793-7272812 None:intergenic 30.0%
GATGAAAAAGAAGCAAGATA+TGG + chr7.4:7274984-7275003 None:intergenic 30.0%
GCTATTTGTAACATTGTAAG+GGG + chr7.4:7274335-7274354 None:intergenic 30.0%
TATATTGCTTGTATGGTGTT+GGG + chr7.4:7273381-7273400 None:intergenic 30.0%
TCTCCCATGTATACAATATA+TGG + chr7.4:7272490-7272509 None:intergenic 30.0%
TGGAATTTAATTGAATGCAG+AGG - chr7.4:7272980-7272999 MS.gene24719:intron 30.0%
TGTAAATTGTCTATCAACAG+TGG + chr7.4:7273998-7274017 None:intergenic 30.0%
TTATATTGCTTGTATGGTGT+TGG + chr7.4:7273382-7273401 None:intergenic 30.0%
TTTACAACACAAGTAGCATT+TGG - chr7.4:7274012-7274031 MS.gene24719:intron 30.0%
! AAATTGTCGTTGCCTTTTAT+TGG + chr7.4:7275626-7275645 None:intergenic 30.0%
! ACATGAACACTAATTTTGCT+AGG - chr7.4:7272870-7272889 MS.gene24719:CDS 30.0%
! AGTGGATACATATTTTTCTC+GGG + chr7.4:7274409-7274428 None:intergenic 30.0%
! CAGTGGATACATATTTTTCT+CGG + chr7.4:7274410-7274429 None:intergenic 30.0%
! GCTATGTATTATGGATTTTC+TGG + chr7.4:7272784-7272803 None:intergenic 30.0%
! TGTAGTTTGTGGTATGTATT+TGG + chr7.4:7273029-7273048 None:intergenic 30.0%
!! ATAAAGTTTGTTGGACCATT+GGG - chr7.4:7273740-7273759 MS.gene24719:CDS 30.0%
!! GTTATTTTCTCATCTGACAT+TGG + chr7.4:7276061-7276080 None:intergenic 30.0%
!! TATAAAGTTTGTTGGACCAT+TGG - chr7.4:7273739-7273758 MS.gene24719:CDS 30.0%
!! TGGTGATGGAAAGAAAATTA+GGG - chr7.4:7274032-7274051 MS.gene24719:intron 30.0%
!! TTGGTGATGGAAAGAAAATT+AGG - chr7.4:7274031-7274050 MS.gene24719:intron 30.0%
!!! GTATTTCTGCAGTTTTTTAC+AGG - chr7.4:7275888-7275907 MS.gene24719:intron 30.0%
AAAAGGTGACATTTCTGACA+AGG - chr7.4:7272897-7272916 MS.gene24719:CDS 35.0%
AACCTTAGTGGAGATGAATA+TGG - chr7.4:7274451-7274470 MS.gene24719:intron 35.0%
AACGACAATTTCACAGAACT+GGG - chr7.4:7275635-7275654 MS.gene24719:intron 35.0%
AACTGCAGAAATACTAGAAC+TGG + chr7.4:7275882-7275901 None:intergenic 35.0%
AACTTCATATCAGTGTCCAT+AGG - chr7.4:7273817-7273836 MS.gene24719:CDS 35.0%
AAGAGTTAAAAGACCAAGAC+AGG - chr7.4:7274147-7274166 MS.gene24719:CDS 35.0%
AAGGTTTGAGGAAATGATGA+TGG - chr7.4:7274560-7274579 MS.gene24719:CDS 35.0%
ACTAGCTGCTTATTCCAAAT+TGG - chr7.4:7275153-7275172 MS.gene24719:intron 35.0%
ACTGTGACTAATGTAGGATA+TGG - chr7.4:7275911-7275930 MS.gene24719:intron 35.0%
AGCAAAAGTTTCAATTGCAG+CGG - chr7.4:7275791-7275810 MS.gene24719:intron 35.0%
ATTGTTCAATCTAGCTGATG+TGG + chr7.4:7275503-7275522 None:intergenic 35.0%
ATTTCATAACGTGTGTCTTC+AGG + chr7.4:7275196-7275215 None:intergenic 35.0%
GAATATGGAAATCCTAGGTA+TGG - chr7.4:7274466-7274485 MS.gene24719:intron 35.0%
GACGTTGTTCCATACTAATA+TGG + chr7.4:7272531-7272550 None:intergenic 35.0%
GACTTGACCATTAAAGAGTT+AGG - chr7.4:7274673-7274692 MS.gene24719:CDS 35.0%
GACTTGTATATAACAGCTTG+AGG + chr7.4:7274939-7274958 None:intergenic 35.0%
GAGATGAATATGGAAATCCT+AGG - chr7.4:7274461-7274480 MS.gene24719:intron 35.0%
GATTATGAGTGGATGCATAT+AGG + chr7.4:7273359-7273378 None:intergenic 35.0%
GATTCAGCAACTCCAATAAA+AGG - chr7.4:7275611-7275630 MS.gene24719:intron 35.0%
GCATTTCATGCTATGAAAAG+AGG - chr7.4:7273883-7273902 MS.gene24719:CDS 35.0%
GTGAAAAAGAGCTTACTTTG+TGG + chr7.4:7274818-7274837 None:intergenic 35.0%
TATGGTTTCGAAAAACAGTC+CGG - chr7.4:7275424-7275443 MS.gene24719:CDS 35.0%
TTCATCACATTGTCCAATTG+GGG + chr7.4:7274857-7274876 None:intergenic 35.0%
TTCCATATTCATCTCCACTA+AGG + chr7.4:7274456-7274475 None:intergenic 35.0%
TTGACCATTAAAGAGTTAGG+AGG - chr7.4:7274676-7274695 MS.gene24719:CDS 35.0%
TTTCATAACGTGTGTCTTCA+GGG + chr7.4:7275195-7275214 None:intergenic 35.0%
! AATATGTATCCACTGACTAG+TGG - chr7.4:7274415-7274434 MS.gene24719:intron 35.0%
! ATTTTATGTGAAGCCTGACT+TGG - chr7.4:7275111-7275130 MS.gene24719:intron 35.0%
! ATTTTCTACTTCACCTGTCT+TGG + chr7.4:7274163-7274182 None:intergenic 35.0%
! ATTTTCTCATCTGACATTGG+AGG + chr7.4:7276058-7276077 None:intergenic 35.0%
! GTGGATACATATTTTTCTCG+GGG + chr7.4:7274408-7274427 None:intergenic 35.0%
! GTTGGCTTAAAGACAACTAT+CGG + chr7.4:7276133-7276152 None:intergenic 35.0%
! TCATTTAAGGTTGTCCTGAA+GGG - chr7.4:7276031-7276050 MS.gene24719:intron 35.0%
! TGAAACTTTTGCTGCCAATA+AGG + chr7.4:7275784-7275803 None:intergenic 35.0%
! TGGATACATATTTTTCTCGG+GGG + chr7.4:7274407-7274426 None:intergenic 35.0%
!! ACTAGCATTGGTATCCTTAT+TGG - chr7.4:7275767-7275786 MS.gene24719:intron 35.0%
!! ACTTTGGGTTAGTCTGTTAA+TGG + chr7.4:7273453-7273472 None:intergenic 35.0%
!! AGTCTTTATGGCATTGGTAA+AGG - chr7.4:7273676-7273695 MS.gene24719:intron 35.0%
!! CTTGCTTCTTTTTCATCTAG+AGG - chr7.4:7274987-7275006 MS.gene24719:CDS 35.0%
!!! ATGTTGGGAGTGATTTTTTG+AGG + chr7.4:7275014-7275033 None:intergenic 35.0%
!!! CGTTGACTGGTTTTAAATTC+AGG - chr7.4:7274910-7274929 MS.gene24719:CDS 35.0%
AAACCCCTCATCATTGAAAC+TGG + chr7.4:7273258-7273277 None:intergenic 40.0%
AAAGAAGCAAGATATGGAGC+AGG + chr7.4:7274978-7274997 None:intergenic 40.0%
AACCAGTCAACGATTTCTTC+AGG + chr7.4:7274902-7274921 None:intergenic 40.0%
AACCCCTCATCATTGAAACT+GGG + chr7.4:7273257-7273276 None:intergenic 40.0%
AACCTGAAGAAATCGTTGAC+TGG - chr7.4:7274897-7274916 MS.gene24719:CDS 40.0%
AAGAAGCAAGATATGGAGCA+GGG + chr7.4:7274977-7274996 None:intergenic 40.0%
AAGGATAGTGTATTGTGCTG+GGG - chr7.4:7274636-7274655 MS.gene24719:CDS 40.0%
AATTTCACAGAACTGGGATC+AGG - chr7.4:7275641-7275660 MS.gene24719:intron 40.0%
ACAACGTCACCATAACATGT+TGG - chr7.4:7272543-7272562 MS.gene24719:CDS 40.0%
ACCACAAACTACACACAACA+AGG - chr7.4:7273036-7273055 MS.gene24719:intron 40.0%
ACTCTTTAATGGTCAAGTCC+TGG + chr7.4:7274672-7274691 None:intergenic 40.0%
AGCATAGTGCATACAATCCA+AGG - chr7.4:7273488-7273507 MS.gene24719:intron 40.0%
AGCTATGGAAAGAGCTTCAA+TGG - chr7.4:7272801-7272820 MS.gene24719:CDS 40.0%
AGTTTCAATGATGAGGGGTT+TGG - chr7.4:7273257-7273276 MS.gene24719:CDS 40.0%
ATGGTTTCGAAAAACAGTCC+GGG - chr7.4:7275425-7275444 MS.gene24719:CDS 40.0%
ATTAAAGAGTTAGGAGGAGC+AGG - chr7.4:7274682-7274701 MS.gene24719:CDS 40.0%
ATTATAGGCGTGTTAGACAC+AGG - chr7.4:7273122-7273141 MS.gene24719:intron 40.0%
ATTTCACAGAACTGGGATCA+GGG - chr7.4:7275642-7275661 MS.gene24719:intron 40.0%
CAACCTTAAATGACAGGTCT+TGG + chr7.4:7276024-7276043 None:intergenic 40.0%
CAACGACAATTTCACAGAAC+TGG - chr7.4:7275634-7275653 MS.gene24719:intron 40.0%
CAGGATGCAATGCTTTCAAT+GGG + chr7.4:7275682-7275701 None:intergenic 40.0%
CATAGCATGAAATGCTCCAA+TGG + chr7.4:7273878-7273897 None:intergenic 40.0%
CATGAAGCAGAGAAACTACA+AGG - chr7.4:7272846-7272865 MS.gene24719:CDS 40.0%
CCAAATTGGCATCACTAACA+GGG - chr7.4:7275167-7275186 MS.gene24719:intron 40.0%
CTAGACAAGGATAAGGTGAT+GGG - chr7.4:7274613-7274632 MS.gene24719:CDS 40.0%
CTGTGCAAACAAGGATACAA+CGG - chr7.4:7275743-7275762 MS.gene24719:CDS 40.0%
GAAAAATGATGACCACCTTG+AGG + chr7.4:7275037-7275056 None:intergenic 40.0%
GAAATGCTCCAATGGCAATT+GGG + chr7.4:7273870-7273889 None:intergenic 40.0%
GAAGGATAGTGTATTGTGCT+GGG - chr7.4:7274635-7274654 MS.gene24719:CDS 40.0%
GATGCAGTGGTTGTGATTAT+GGG - chr7.4:7274587-7274606 MS.gene24719:CDS 40.0%
GCGCAATATCTCTCTACTTT+GGG + chr7.4:7273468-7273487 None:intergenic 40.0%
GGATTTCAATAACCGAGGAT+TGG - chr7.4:7274235-7274254 MS.gene24719:intron 40.0%
GGATTTCTCTTCACCTTTAG+GGG + chr7.4:7273083-7273102 None:intergenic 40.0%
GGGATTTCTCTTCACCTTTA+GGG + chr7.4:7273084-7273103 None:intergenic 40.0%
GTCTTCTTCAAGTCCTACTA+TGG + chr7.4:7274710-7274729 None:intergenic 40.0%
TACAGGACTGTGACTAATGT+AGG - chr7.4:7275905-7275924 MS.gene24719:intron 40.0%
TACATATCAACAAATGCCCC+TGG + chr7.4:7274760-7274779 None:intergenic 40.0%
TCAGAGAAAAAGTCACGTGA+CGG + chr7.4:7273847-7273866 None:intergenic 40.0%
TCAGGACAACCTTAAATGAC+AGG + chr7.4:7276030-7276049 None:intergenic 40.0%
TCATATCAGTGTCCATAGGT+GGG - chr7.4:7273821-7273840 MS.gene24719:CDS 40.0%
TCCAAATTGGCATCACTAAC+AGG - chr7.4:7275166-7275185 MS.gene24719:intron 40.0%
TCCAATTAAATCTCGGCTGT+CGG - chr7.4:7274214-7274233 MS.gene24719:intron 40.0%
TCTAGACAAGGATAAGGTGA+TGG - chr7.4:7274612-7274631 MS.gene24719:CDS 40.0%
TGAAATGCTCCAATGGCAAT+TGG + chr7.4:7273871-7273890 None:intergenic 40.0%
TGATGCAGTGGTTGTGATTA+TGG - chr7.4:7274586-7274605 MS.gene24719:CDS 40.0%
TGATTATGGGACTCTAGACA+AGG - chr7.4:7274600-7274619 MS.gene24719:CDS 40.0%
TGCGCAATATCTCTCTACTT+TGG + chr7.4:7273469-7273488 None:intergenic 40.0%
TGCTCCTCCTAACTCTTTAA+TGG + chr7.4:7274683-7274702 None:intergenic 40.0%
TGGGATTTCTCTTCACCTTT+AGG + chr7.4:7273085-7273104 None:intergenic 40.0%
TGTAGTTTCTCTGCTTCATG+TGG + chr7.4:7272846-7272865 None:intergenic 40.0%
TTAAATCCTTTCACCCTGAC+TGG - chr7.4:7275278-7275297 MS.gene24719:CDS 40.0%
TTCATATCAGTGTCCATAGG+TGG - chr7.4:7273820-7273839 MS.gene24719:CDS 40.0%
TTGAATTCTCGTATAGGCAG+TGG - chr7.4:7272661-7272680 MS.gene24719:CDS 40.0%
TTTCTTAGGAATGCCCCTAA+AGG - chr7.4:7273067-7273086 MS.gene24719:intron 40.0%
TTTGCACAGGAAGGCAATAT+AGG + chr7.4:7275732-7275751 None:intergenic 40.0%
! ACACAAGTAGCATTTGGTGA+TGG - chr7.4:7274018-7274037 MS.gene24719:intron 40.0%
! ACCTTGTTGTGTGTAGTTTG+TGG + chr7.4:7273040-7273059 None:intergenic 40.0%
! CATATTTTTCTCGGGGGTAA+AGG + chr7.4:7274401-7274420 None:intergenic 40.0%
! CATTTAAGGTTGTCCTGAAG+GGG - chr7.4:7276032-7276051 MS.gene24719:intron 40.0%
! GTCATTTAAGGTTGTCCTGA+AGG - chr7.4:7276030-7276049 MS.gene24719:intron 40.0%
! TAGTTGATTCCATCAGTTCC+TGG + chr7.4:7275830-7275849 None:intergenic 40.0%
! TATGGTGTTGGGATTATGAG+TGG + chr7.4:7273370-7273389 None:intergenic 40.0%
! TTCAATAACCGAGGATTGGT+TGG - chr7.4:7274239-7274258 MS.gene24719:intron 40.0%
!! ACTTGTTTTCTTGCACAGCA+AGG - chr7.4:7273525-7273544 MS.gene24719:CDS 40.0%
!! TGATGATGGTTATGATGCAG+TGG - chr7.4:7274574-7274593 MS.gene24719:CDS 40.0%
AACATGTTGGAGACTGCCAT+TGG - chr7.4:7272556-7272575 MS.gene24719:CDS 45.0%
AACCATCGAAAACCCAAGTC+CGG - chr7.4:7273588-7273607 MS.gene24719:CDS 45.0%
AACTACACACAACAAGGTCG+TGG - chr7.4:7273042-7273061 MS.gene24719:intron 45.0%
AATCACTCCCAACATCCTCA+AGG - chr7.4:7275019-7275038 MS.gene24719:intron 45.0%
ACAAGGTCGTGGGATTTCTT+AGG - chr7.4:7273053-7273072 MS.gene24719:intron 45.0%
ACATTCACTGAAAGACCCTC+AGG + chr7.4:7275968-7275987 None:intergenic 45.0%
ACCCCTCATCATTGAAACTG+GGG + chr7.4:7273256-7273275 None:intergenic 45.0%
ACTACACACAACAAGGTCGT+GGG - chr7.4:7273043-7273062 MS.gene24719:intron 45.0%
ACTTAGGAGCTGGATATGCA+TGG + chr7.4:7275858-7275877 None:intergenic 45.0%
ACTTGCCTTTCCATCTACGT+GGG + chr7.4:7273289-7273308 None:intergenic 45.0%
AGGATAGTGTATTGTGCTGG+GGG - chr7.4:7274637-7274656 MS.gene24719:CDS 45.0%
AGGGCAGATTTAATTGCAGC+AGG + chr7.4:7275307-7275326 None:intergenic 45.0%
ATACATGGGAGAACTACCAG+CGG - chr7.4:7272498-7272517 MS.gene24719:CDS 45.0%
ATGACCACCTTGAGGATGTT+GGG + chr7.4:7275029-7275048 None:intergenic 45.0%
ATGGAAAGGCAAGTGTGTAC+AGG - chr7.4:7273295-7273314 MS.gene24719:CDS 45.0%
ATTGCCTTCCTGTGCAAACA+AGG - chr7.4:7275734-7275753 MS.gene24719:CDS 45.0%
CAATCTCTCCAACCAATCCT+CGG + chr7.4:7274250-7274269 None:intergenic 45.0%
CACATTGTCCAATTGGGGTA+TGG + chr7.4:7274852-7274871 None:intergenic 45.0%
CCAAGGAGCAACATTCTCAA+CGG + chr7.4:7273956-7273975 None:intergenic 45.0%
CCAATTGGGGTATGGTGAAA+AGG + chr7.4:7274844-7274863 None:intergenic 45.0%
CCACAAAGCGAATGCAGTTA+GGG - chr7.4:7275477-7275496 MS.gene24719:CDS 45.0%
CCAGGATGCAATGCTTTCAA+TGG + chr7.4:7275683-7275702 None:intergenic 45.0%
CCCTGTTAGTGATGCCAATT+TGG + chr7.4:7275170-7275189 None:intergenic 45.0%
CCTCCATCACAGTTATTCCA+GGG - chr7.4:7274740-7274759 MS.gene24719:CDS 45.0%
CTCCATCACAGTTATTCCAG+GGG - chr7.4:7274741-7274760 MS.gene24719:CDS 45.0%
CTGTCGGATTTCAATAACCG+AGG - chr7.4:7274230-7274249 MS.gene24719:intron 45.0%
GAAGTTGACACCATCAGCAA+TGG + chr7.4:7273803-7273822 None:intergenic 45.0%
GCAACATTCTCAACGGACAT+TGG + chr7.4:7273949-7273968 None:intergenic 45.0%
GCAGCAACAGTCATAATCCA+AGG + chr7.4:7273973-7273992 None:intergenic 45.0%
GGAAGGATAGTGTATTGTGC+TGG - chr7.4:7274634-7274653 MS.gene24719:CDS 45.0%
GGCAAGAGCCCATATTAGTA+TGG - chr7.4:7272519-7272538 MS.gene24719:CDS 45.0%
GGTGCAAGTCTTTATGGCAT+TGG - chr7.4:7273670-7273689 MS.gene24719:intron 45.0%
TACATTGCAACACGTGCTGA+TGG + chr7.4:7273721-7273740 None:intergenic 45.0%
TAGAACTGGAACTTAGGAGC+TGG + chr7.4:7275868-7275887 None:intergenic 45.0%
TCCACAAAGCGAATGCAGTT+AGG - chr7.4:7275476-7275495 MS.gene24719:CDS 45.0%
TCCGACAGCCGAGATTTAAT+TGG + chr7.4:7274218-7274237 None:intergenic 45.0%
TCCTCCATCACAGTTATTCC+AGG - chr7.4:7274739-7274758 MS.gene24719:CDS 45.0%
TCTTGCTCTGCTGGAAATGA+TGG - chr7.4:7273916-7273935 MS.gene24719:CDS 45.0%
TGAGGAATTTGCCTTACCAG+TGG + chr7.4:7275335-7275354 None:intergenic 45.0%
TGCCCCAGTTTCAATGATGA+GGG - chr7.4:7273251-7273270 MS.gene24719:CDS 45.0%
TGGAAAGGCAAGTGTGTACA+GGG - chr7.4:7273296-7273315 MS.gene24719:CDS 45.0%
TGGCAGTCTCCAACATGTTA+TGG + chr7.4:7272555-7272574 None:intergenic 45.0%
TGGGACTCTAGACAAGGATA+AGG - chr7.4:7274606-7274625 MS.gene24719:CDS 45.0%
TTCTCTGACCCAATTGCCAT+TGG - chr7.4:7273859-7273878 MS.gene24719:CDS 45.0%
TTCTTGCACAGCAAGGTGAT+AGG - chr7.4:7273532-7273551 MS.gene24719:CDS 45.0%
TTGCCCCAGTTTCAATGATG+AGG - chr7.4:7273250-7273269 MS.gene24719:CDS 45.0%
TTTCGATGGTTGGACCAGAT+GGG + chr7.4:7273579-7273598 None:intergenic 45.0%
TTTGATGAGGCCATTGCTGA+TGG - chr7.4:7273790-7273809 MS.gene24719:CDS 45.0%
! ACATTGCAACACGTGCTGAT+GGG + chr7.4:7273720-7273739 None:intergenic 45.0%
! CCTTTTCACCATACCCCAAT+TGG - chr7.4:7274841-7274860 MS.gene24719:CDS 45.0%
! CGTTGTATCCTTGTTTGCAC+AGG + chr7.4:7275745-7275764 None:intergenic 45.0%
! GCACCAAGACCTGTCATTTA+AGG - chr7.4:7276018-7276037 MS.gene24719:intron 45.0%
! GTATCCTTGTTTGCACAGGA+AGG + chr7.4:7275741-7275760 None:intergenic 45.0%
! GTGAGAGGTGCAAGTCTTTA+TGG - chr7.4:7273664-7273683 MS.gene24719:intron 45.0%
! TTTTCGATGGTTGGACCAGA+TGG + chr7.4:7273580-7273599 None:intergenic 45.0%
!! ACAAGGATAAGGTGATGGGA+AGG - chr7.4:7274617-7274636 MS.gene24719:CDS 45.0%
!! CCATTGAAAGCATTGCATCC+TGG - chr7.4:7275680-7275699 MS.gene24719:intron 45.0%
!! ATATATATATATATTAAAGA+AGG + chr7.4:7272624-7272643 None:intergenic 5.0%
AAAGGCAAGTGTGTACAGGG+AGG - chr7.4:7273299-7273318 MS.gene24719:CDS 50.0%
AAATCTGCCCTCATGACCAC+TGG - chr7.4:7275316-7275335 MS.gene24719:intron 50.0%
AACATAAGCAGCAGCCGCAA+TGG + chr7.4:7275260-7275279 None:intergenic 50.0%
ACCAGATAGAGCACAGCACA+AGG + chr7.4:7275072-7275091 None:intergenic 50.0%
AGGAGCTGGATATGCATGGT+AGG + chr7.4:7275854-7275873 None:intergenic 50.0%
AGTGACATGGACATGCTTGC+TGG - chr7.4:7273766-7273785 MS.gene24719:CDS 50.0%
ATTCCATCAGTTCCTGGTGC+AGG + chr7.4:7275824-7275843 None:intergenic 50.0%
ATTGGTAAAGGCAATGCCCG+TGG - chr7.4:7273688-7273707 MS.gene24719:intron 50.0%
CACTTGCCTTTCCATCTACG+TGG + chr7.4:7273290-7273309 None:intergenic 50.0%
CCAGATAGAGCACAGCACAA+GGG + chr7.4:7275071-7275090 None:intergenic 50.0%
CCCTAACTGCATTCGCTTTG+TGG + chr7.4:7275480-7275499 None:intergenic 50.0%
CCCTGGAATAACTGTGATGG+AGG + chr7.4:7274743-7274762 None:intergenic 50.0%
CCGTTGAGAATGTTGCTCCT+TGG - chr7.4:7273953-7273972 MS.gene24719:intron 50.0%
CGTCTTGCTGCTAACCTTAG+TGG - chr7.4:7274439-7274458 MS.gene24719:intron 50.0%
CTTGCCTTTCCATCTACGTG+GGG + chr7.4:7273288-7273307 None:intergenic 50.0%
GAATGCAGAGGAGGAGAATG+TGG - chr7.4:7272992-7273011 MS.gene24719:intron 50.0%
GATGACCACCTTGAGGATGT+TGG + chr7.4:7275030-7275049 None:intergenic 50.0%
GCAGCTAGTATGTCCAATCC+TGG + chr7.4:7275142-7275161 None:intergenic 50.0%
GCCCCAGTTTCAATGATGAG+GGG - chr7.4:7273252-7273271 MS.gene24719:CDS 50.0%
GCTAAAGTCACAGCACCTGA+GGG - chr7.4:7275950-7275969 MS.gene24719:intron 50.0%
GGAGCTGGATATGCATGGTA+GGG + chr7.4:7275853-7275872 None:intergenic 50.0%
GGATACAACGGCACTAGCAT+TGG - chr7.4:7275755-7275774 MS.gene24719:CDS 50.0%
GTTCTCACTTCTTGCTCTGC+TGG - chr7.4:7273907-7273926 MS.gene24719:CDS 50.0%
GTTTCAATTGCAGCGGCGTT+AGG - chr7.4:7275798-7275817 MS.gene24719:intron 50.0%
TACTTCAACCTCGACCCATC+TGG - chr7.4:7273562-7273581 MS.gene24719:CDS 50.0%
TGCCCCTGGAATAACTGTGA+TGG + chr7.4:7274746-7274765 None:intergenic 50.0%
TGCCTTACCAGTGGTCATGA+GGG + chr7.4:7275326-7275345 None:intergenic 50.0%
TGTGACCAATATCGCAGTCC+CGG + chr7.4:7275446-7275465 None:intergenic 50.0%
TTCTCAACGGACATTGGTCG+AGG + chr7.4:7273943-7273962 None:intergenic 50.0%
TTGCCTTACCAGTGGTCATG+AGG + chr7.4:7275327-7275346 None:intergenic 50.0%
TTGCCTTTCCATCTACGTGG+GGG + chr7.4:7273287-7273306 None:intergenic 50.0%
! GGACTTGGGTTTTCGATGGT+TGG + chr7.4:7273589-7273608 None:intergenic 50.0%
! TTCTGGCTAACTGCTTGCTG+TGG + chr7.4:7272767-7272786 None:intergenic 50.0%
!! CATGCTTGCTGGCTTTGATG+AGG - chr7.4:7273777-7273796 MS.gene24719:CDS 50.0%
!! TCTGGCTAACTGCTTGCTGT+GGG + chr7.4:7272766-7272785 None:intergenic 50.0%
AATCCTGGTGCAGCCAAGTC+AGG + chr7.4:7275127-7275146 None:intergenic 55.0%
ACAGAACTGGGATCAGGGTC+AGG - chr7.4:7275647-7275666 MS.gene24719:intron 55.0%
ACAGTCCGGGACTGCGATAT+TGG - chr7.4:7275438-7275457 MS.gene24719:CDS 55.0%
AGGACTCCAGTCAGGGTGAA+AGG + chr7.4:7275287-7275306 None:intergenic 55.0%
ATTGCAGCAGGACTCCAGTC+AGG + chr7.4:7275295-7275314 None:intergenic 55.0%
CACTCACACTTCGTCGACAG+CGG - chr7.4:7273630-7273649 MS.gene24719:intron 55.0%
CACTCCCAACATCCTCAAGG+TGG - chr7.4:7275022-7275041 MS.gene24719:intron 55.0%
CATCGAAAACCCAAGTCCGG+TGG - chr7.4:7273591-7273610 MS.gene24719:CDS 55.0%
CCAAGTCCGGTGGATGATCA+GGG - chr7.4:7273601-7273620 MS.gene24719:CDS 55.0%
CCCTTGTGCTGTGCTCTATC+TGG - chr7.4:7275068-7275087 MS.gene24719:intron 55.0%
CCTGATCATCCACCGGACTT+GGG + chr7.4:7273603-7273622 None:intergenic 55.0%
CTAATATGGGCTCTTGCCGC+TGG + chr7.4:7272517-7272536 None:intergenic 55.0%
GACCATTGGGTGCAGTGACA+TGG - chr7.4:7273753-7273772 MS.gene24719:CDS 55.0%
GCAAGACGTCCACTAGTCAG+TGG + chr7.4:7274427-7274446 None:intergenic 55.0%
GGAGGAGCAGGAACCATAGT+AGG - chr7.4:7274694-7274713 MS.gene24719:CDS 55.0%
GGCATGTCCACATGCCATTG+CGG - chr7.4:7275243-7275262 MS.gene24719:CDS 55.0%
GGCTAAAGTCACAGCACCTG+AGG - chr7.4:7275949-7275968 MS.gene24719:intron 55.0%
GTACAGGGAGGCAACTTCAC+AGG - chr7.4:7273311-7273330 MS.gene24719:CDS 55.0%
GTCCATGTCACTGCACCCAA+TGG + chr7.4:7273758-7273777 None:intergenic 55.0%
TCGACGAAGTGTGAGTGCCA+TGG + chr7.4:7273627-7273646 None:intergenic 55.0%
TGCACCTCTCACCACTGATC+CGG + chr7.4:7273656-7273675 None:intergenic 55.0%
TGCCCTCATGACCACTGGTA+AGG - chr7.4:7275321-7275340 MS.gene24719:intron 55.0%
TTGCAGCAGGACTCCAGTCA+GGG + chr7.4:7275294-7275313 None:intergenic 55.0%
! CACCGGACTTGGGTTTTCGA+TGG + chr7.4:7273593-7273612 None:intergenic 55.0%
! GTGTATTGTGCTGGGGGTAC+AGG - chr7.4:7274643-7274662 MS.gene24719:CDS 55.0%
! TGACTTGGCTGCACCAGGAT+TGG - chr7.4:7275126-7275145 MS.gene24719:intron 55.0%
AGGCCTGCACCAGGAACTGA+TGG - chr7.4:7275818-7275837 MS.gene24719:intron 60.0%
CCATGGCCCTGATCATCCAC+CGG + chr7.4:7273610-7273629 None:intergenic 60.0%
CCCAAGTCCGGTGGATGATC+AGG - chr7.4:7273600-7273619 MS.gene24719:CDS 60.0%
CCCTGATCATCCACCGGACT+TGG + chr7.4:7273604-7273623 None:intergenic 60.0%
CCTCCCCCACGTAGATGGAA+AGG - chr7.4:7273281-7273300 MS.gene24719:CDS 60.0%
CCTTTCCATCTACGTGGGGG+AGG + chr7.4:7273284-7273303 None:intergenic 60.0%
CTGACATTGGAGGCCCCTTC+AGG + chr7.4:7276048-7276067 None:intergenic 60.0%
GGTAAAGGCAATGCCCGTGG+TGG - chr7.4:7273691-7273710 MS.gene24719:intron 60.0%
TGCTGATGGGACACCACCAC+GGG + chr7.4:7273707-7273726 None:intergenic 60.0%
TGGTTGGACCAGATGGGTCG+AGG + chr7.4:7273573-7273592 None:intergenic 60.0%
TTGGACCTCCCCCACGTAGA+TGG - chr7.4:7273276-7273295 MS.gene24719:CDS 60.0%
! GTGCTGATGGGACACCACCA+CGG + chr7.4:7273708-7273727 None:intergenic 60.0%
!! AAGCCTGACTTGGCTGCACC+AGG - chr7.4:7275121-7275140 MS.gene24719:intron 60.0%
CACACTTCGTCGACAGCGGC+CGG - chr7.4:7273634-7273653 MS.gene24719:intron 65.0%
CCGGTGGATGATCAGGGCCA+TGG - chr7.4:7273607-7273626 MS.gene24719:intron 65.0%
GCAGCAGCCGCAATGGCATG+TGG + chr7.4:7275253-7275272 None:intergenic 65.0%
GTCACGTGACGGCCCACCTA+TGG + chr7.4:7273836-7273855 None:intergenic 65.0%
AGCGGCGTTAGGCCTGCACC+AGG - chr7.4:7275809-7275828 MS.gene24719:intron 70.0%
GCGGCCGGATCAGTGGTGAG+AGG - chr7.4:7273649-7273668 MS.gene24719:intron 70.0%
GTCGACAGCGGCCGGATCAG+TGG - chr7.4:7273642-7273661 MS.gene24719:intron 70.0%
! TGCTGGGGGTACAGGCAGCC+AGG - chr7.4:7274651-7274670 MS.gene24719:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 7272395 7276159 7272395 ID=MS.gene24719
chr7.4 mRNA 7272395 7276159 7272395 ID=MS.gene24719.t1;Parent=MS.gene24719
chr7.4 exon 7276149 7276159 7276149 ID=MS.gene24719.t1.exon1;Parent=MS.gene24719.t1
chr7.4 CDS 7276149 7276159 7276149 ID=cds.MS.gene24719.t1;Parent=MS.gene24719.t1
chr7.4 exon 7275687 7275784 7275687 ID=MS.gene24719.t1.exon2;Parent=MS.gene24719.t1
chr7.4 CDS 7275687 7275784 7275687 ID=cds.MS.gene24719.t1;Parent=MS.gene24719.t1
chr7.4 exon 7275411 7275554 7275411 ID=MS.gene24719.t1.exon3;Parent=MS.gene24719.t1
chr7.4 CDS 7275411 7275554 7275411 ID=cds.MS.gene24719.t1;Parent=MS.gene24719.t1
chr7.4 exon 7275212 7275317 7275212 ID=MS.gene24719.t1.exon4;Parent=MS.gene24719.t1
chr7.4 CDS 7275212 7275317 7275212 ID=cds.MS.gene24719.t1;Parent=MS.gene24719.t1
chr7.4 exon 7274501 7275011 7274501 ID=MS.gene24719.t1.exon5;Parent=MS.gene24719.t1
chr7.4 CDS 7274501 7275011 7274501 ID=cds.MS.gene24719.t1;Parent=MS.gene24719.t1
chr7.4 exon 7274072 7274172 7274072 ID=MS.gene24719.t1.exon6;Parent=MS.gene24719.t1
chr7.4 CDS 7274072 7274172 7274072 ID=cds.MS.gene24719.t1;Parent=MS.gene24719.t1
chr7.4 exon 7273733 7273960 7273733 ID=MS.gene24719.t1.exon7;Parent=MS.gene24719.t1
chr7.4 CDS 7273733 7273960 7273733 ID=cds.MS.gene24719.t1;Parent=MS.gene24719.t1
chr7.4 exon 7273514 7273622 7273514 ID=MS.gene24719.t1.exon8;Parent=MS.gene24719.t1
chr7.4 CDS 7273514 7273622 7273514 ID=cds.MS.gene24719.t1;Parent=MS.gene24719.t1
chr7.4 exon 7273217 7273430 7273217 ID=MS.gene24719.t1.exon9;Parent=MS.gene24719.t1
chr7.4 CDS 7273217 7273430 7273217 ID=cds.MS.gene24719.t1;Parent=MS.gene24719.t1
chr7.4 exon 7272395 7272936 7272395 ID=MS.gene24719.t1.exon10;Parent=MS.gene24719.t1
chr7.4 CDS 7272395 7272936 7272395 ID=cds.MS.gene24719.t1;Parent=MS.gene24719.t1
Gene Sequence

>MS.gene24719

ATGAAAGAAAGGTATACACTAGAGAAGAGTTTAATTTCTGTTAGACACTTTAACCTATAATAATTGATGTGAATTTTGTGACTAATAAACAGCCATATATTGTATACATGGGAGAACTACCAGCGGCAAGAGCCCATATTAGTATGGAACAACGTCACCATAACATGTTGGAGACTGCCATTGGAAAGTAATGATTTCAATTCTCAAGTTTTATTCCATTTTATTACCTTCTTTAATATATATATATATATATATATATATATATATTGAATTCTCGTATAGGCAGTGGATCATGCGTAGTTATTAAAATTAATTCATGAACACTTATTAATGACTTTTTTTCTTCTTCATTTGTTATTACATTTTCTCCCACAGCAAGCAGTTAGCCAGAAAATCCATAATACATAGCTATGGAAAGAGCTTCAATGGATTTGTTGCACGACTTTTGCCACATGAAGCAGAGAAACTACAAGGTACATGAACACTAATTTTGCTAGGCTTAAAAAGGTGACATTTCTGACAAGGAAATATATGATATGAAGGGACAAATTAATTCTCCAATAATAATTATGATTATACATATTGTGGAATTTAATTGAATGCAGAGGAGGAGAATGTGGTATCTGTGTTTCCAAATACATACCACAAACTACACACAACAAGGTCGTGGGATTTCTTAGGAATGCCCCTAAAGGTGAAGAGAAATCCCAACATAGAAAGTCACATCATTATAGGCGTGTTAGACACAGGTATATATATAGATTAATAAGAAAATATACATTTCTCGAATAAGTATAACAAAAATGTATAGTATAATAAACAATGATGAAATATGTAAACAGGTATTTGGGTTGATTGCCCCAGTTTCAATGATGAGGGGTTTGGACCTCCCCCACGTAGATGGAAAGGCAAGTGTGTACAGGGAGGCAACTTCACAGGCTGCAACAAGTATTCTTCTACTCCTATATGCATCCACTCATAATCCCAACACCATACAAGCAATATAAGAGTGTTCACCAAAAAGTGATGTTAATTGAAACTATATTTAAATGACACCATTAACAGACTAACCCAAAGTAGAGAGATATTGCGCAGCATAGTGCATACAATCCAAGGTTGATTTGATTTAAACTTGTTTTCTTGCACAGCAAGGTGATAGGAGCAAAATACTTCAACCTCGACCCATCTGGTCCAACCATCGAAAACCCAAGTCCGGTGGATGATCAGGGCCATGGCACTCACACTTCGTCGACAGCGGCCGGATCAGTGGTGAGAGGTGCAAGTCTTTATGGCATTGGTAAAGGCAATGCCCGTGGTGGTGTCCCATCAGCACGTGTTGCAATGTATAAAGTTTGTTGGACCATTGGGTGCAGTGACATGGACATGCTTGCTGGCTTTGATGAGGCCATTGCTGATGGTGTCAACTTCATATCAGTGTCCATAGGTGGGCCGTCACGTGACTTTTTCTCTGACCCAATTGCCATTGGAGCATTTCATGCTATGAAAAGAGGTGTTCTCACTTCTTGCTCTGCTGGAAATGATGGTCCTCGACCAATGTCCGTTGAGAATGTTGCTCCTTGGATTATGACTGTTGCTGCTTCCACTGTTGATAGACAATTTACAACACAAGTAGCATTTGGTGATGGAAAGAAAATTAGGGTAAGTAGCATTGAAGTAGTGTTCATTTAATGCAATTTGACTCAATGTTGGATAGCTCAGCTAATTTGAACTAAAATTTGAATAGTTAGTTACAAGAGTTAAAAGACCAAGACAGGTGAAGTAGAAAATATTAACATGTTCAACATCAATTTACAATCTCTCCAATTAAATCTCGGCTGTCGGATTTCAATAACCGAGGATTGGTTGGAGAGATTGTAGTAGAAATTTAATTTGTTTATGAAACGATGCTAAAACTTAATAAGTTGAAACGAAATTAACCCCTTACAATGTTACAAATAGCTTACTTATTTTGATTTGTACTATGTAGGGACTATCTATTAATACCTTTACCCCCGAGAAAAATATGTATCCACTGACTAGTGGACGTCTTGCTGCTAACCTTAGTGGAGATGAATATGGAAATCCTAGGTATGGTTATTATTCTTATATCATTAACTTTGATTGTTGGTTATATATTTTTTTTATTTCTTGATAATAAGATTACAAAGGTTTGAGGAAATGATGATGGTTATGATGCAGTGGTTGTGATTATGGGACTCTAGACAAGGATAAGGTGATGGGAAGGATAGTGTATTGTGCTGGGGGTACAGGCAGCCAGGACTTGACCATTAAAGAGTTAGGAGGAGCAGGAACCATAGTAGGACTTGAAGAAGACGAAGATGCTTCCTCCATCACAGTTATTCCAGGGGCATTTGTTGATATGTATACTGTAGGCAAAAACATTGAAATCTATATTAATTCCACAAAGTAAGCTCTTTTTCACTCTCCTTTTCACCATACCCCAATTGGACAATGTGATGAATTTTTGAAAATAAATGAACTAACCTGAAGAAATCGTTGACTGGTTTTAAATTCAGGAATCCTCAAGCTGTTATATACAAGTCAGCAAGTACAAGATTCCCTGCTCCATATCTTGCTTCTTTTTCATCTAGAGGACCTCAAAAAATCACTCCCAACATCCTCAAGGTGGTCATCATTTTTCTATCTTTTTATCCCTTGTGCTGTGCTCTATCTGGTTTGTCTTCTAAATGTCAACATTTTATGTGAAGCCTGACTTGGCTGCACCAGGATTGGACATACTAGCTGCTTATTCCAAATTGGCATCACTAACAGGGTACCCTGAAGACACACGTTATGAAATTTTTAATATAATATCAGGAACATCAATGGCATGTCCACATGCCATTGCGGCTGCTGCTTATGTTAAATCCTTTCACCCTGACTGGAGTCCTGCTGCAATTAAATCTGCCCTCATGACCACTGGTAAGGCAAATTCCTCATCTATAATCAATATGAATAACATCTCTTATTATCAAAAATAAAATACAGTATTGAGTGGTAGTTAAATTTATGGTTTCGAAAAACAGTCCGGGACTGCGATATTGGTCACATTTTTATGACTCCACAAAGCGAATGCAGTTAGGGCCACATCAGCTAGATTGAACAATATCAACGACTGCGATTTGAAACCTACATAAATTTTTAAGGTAGATAGTGAAATTTTTATTTACAAATCTGACATTTTTTCTTTTATGCGATTCAGCAACTCCAATAAAAGGCAACGACAATTTCACAGAACTGGGATCAGGGTCAGGACAGATTAGCCCATTGAAAGCATTGCATCCTGGTCTAATTTATGACATTAGAATGAACTCCTATATTGCCTTCCTGTGCAAACAAGGATACAACGGCACTAGCATTGGTATCCTTATTGGCAGCAAAAGTTTCAATTGCAGCGGCGTTAGGCCTGCACCAGGAACTGATGGAATCAACTACCCTACCATGCATATCCAGCTCCTAAGTTCCAGTTCTAGTATTTCTGCAGTTTTTTACAGGACTGTGACTAATGTAGGATATGGAACTTCAACATACAAGGCTAAAGTCACAGCACCTGAGGGTCTTTCAGTGAATGTCATCCCAGATACATTAAAGTTTACTAAATTGCACCAAGACCTGTCATTTAAGGTTGTCCTGAAGGGGCCTCCAATGTCAGATGAGAAAATAACATTATCTGCATTACTTGAATGGAATGACTCTAAACACAATGTCAGAAGTCCGATAGTTGTCTTTAAGCCAACATTCTGA
Protein sequence

>MS.gene24719.t1

MKESKQLARKSIIHSYGKSFNGFVARLLPHEAEKLQEEENVVSVFPNTYHKLHTTRSWDFLGMPLKVKRNPNIESHIIIGVLDTGIWVDCPSFNDEGFGPPPRRWKGKCVQGGNFTGCNNKVIGAKYFNLDPSGPTIENPSPVDDQGHGTHTSSTAAGSVVRGASLYGIGKGNARGGVPSARVAMYKVCWTIGCSDMDMLAGFDEAIADGVNFISVSIGGPSRDFFSDPIAIGAFHAMKRGVLTSCSAGNDGPRPMSVENVAPWIMTVAASTVDRQFTTQVAFGDGKKIRGLSINTFTPEKNMYPLTSGRLAANLSGDEYGNPSGCDYGTLDKDKVMGRIVYCAGGTGSQDLTIKELGGAGTIVGLEEDEDASSITVIPGAFVDMYTVGKNIEIYINSTKNPQAVIYKSASTRFPAPYLASFSSRGPQKITPNILKPDLAAPGLDILAAYSKLASLTGYPEDTRYEIFNIISGTSMACPHAIAAAAYVKSFHPDWSPAAIKSALMTTATPIKGNDNFTELGSGSGQISPLKALHPGLIYDIRMNSYIAFLCKQGYNGTSIGILIGSKSFNCSGVRPAPGTDGINYPTMHIQLLSSSSSISAVFYRTVTNVGYGTSTYKAKVTAPEGLSVNVIPDTLKFTKLHQDLSFKVVLKGPPMSDEKITLSALLEWNDSKHNVRSPIVVFKPTF