AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08830.t1 MTR_8g083220 97.570 782 18 1 1 782 1 781 0.0 1573
MS.gene08830.t1 MTR_8g072440 44.324 740 392 11 40 776 31 753 0.0 596
MS.gene08830.t1 MTR_5g025010 43.742 743 395 13 40 776 25 750 0.0 585
MS.gene08830.t1 MTR_8g072440 44.648 710 374 10 69 776 19 711 0.0 577
MS.gene08830.t1 MTR_5g025010 44.105 721 381 12 61 776 15 718 0.0 577
MS.gene08830.t1 MTR_4g053630 41.914 742 411 11 44 778 4 732 0.0 552
MS.gene08830.t1 MTR_8g042710 42.520 762 400 18 37 776 19 764 0.0 547
MS.gene08830.t1 MTR_8g042670 42.988 763 366 19 44 776 35 758 0.0 547
MS.gene08830.t1 MTR_3g082200 41.375 771 401 20 36 778 25 772 0.0 543
MS.gene08830.t1 MTR_7g098630 41.857 743 376 16 61 775 46 760 0.0 541
MS.gene08830.t1 MTR_7g098070 40.597 771 405 21 38 779 19 765 4.14e-180 535
MS.gene08830.t1 MTR_4g103400 41.414 792 399 22 24 776 12 777 7.64e-180 535
MS.gene08830.t1 MTR_4g134320 39.721 788 420 21 22 779 7 769 4.50e-179 533
MS.gene08830.t1 MTR_5g096750 42.243 767 375 22 44 776 33 765 1.06e-177 529
MS.gene08830.t1 MTR_4g103490 40.827 774 395 21 44 776 33 784 1.88e-176 526
MS.gene08830.t1 MTR_4g103430 41.296 741 393 18 57 775 48 768 6.02e-176 525
MS.gene08830.t1 MTR_3g104930 42.914 755 379 17 43 775 37 761 6.02e-176 524
MS.gene08830.t1 MTR_4g103450 40.891 763 400 19 44 776 3 744 3.08e-174 519
MS.gene08830.t1 MTR_4g103480 40.604 761 405 18 44 776 46 787 3.93e-174 520
MS.gene08830.t1 MTR_4g073540 42.779 727 376 19 78 779 60 771 2.13e-173 518
MS.gene08830.t1 MTR_4g095360 40.132 760 395 20 42 775 29 754 3.01e-172 514
MS.gene08830.t1 MTR_3g114420 41.124 783 409 20 23 778 10 767 8.85e-172 514
MS.gene08830.t1 MTR_3g061110 38.314 783 422 19 22 776 4 753 1.19e-170 510
MS.gene08830.t1 MTR_3g102810 40.181 774 417 18 23 774 4 753 2.18e-168 504
MS.gene08830.t1 MTR_7g075900 42.053 711 377 14 81 775 80 771 9.78e-168 503
MS.gene08830.t1 MTR_8g022870 40.103 773 393 18 51 779 33 779 1.87e-167 503
MS.gene08830.t1 MTR_4g103495 41.586 719 375 17 38 729 24 724 8.28e-167 501
MS.gene08830.t1 MTR_2g018135 40.461 781 400 19 39 775 23 782 1.13e-166 501
MS.gene08830.t1 MTR_4g053635 41.474 692 382 12 96 780 2 677 1.44e-166 497
MS.gene08830.t1 MTR_4g053630 42.216 668 366 11 118 778 1 655 7.01e-166 494
MS.gene08830.t1 MTR_1g018510 40.323 744 398 13 56 774 2 724 8.56e-166 497
MS.gene08830.t1 MTR_0047s0120 40.584 754 407 18 38 774 26 755 5.80e-165 496
MS.gene08830.t1 MTR_2g018125 40.205 781 400 19 40 775 25 783 9.49e-165 496
MS.gene08830.t1 MTR_4g071560 49.474 570 220 9 48 598 1 521 4.22e-164 486
MS.gene08830.t1 MTR_7g081750 39.037 789 403 21 44 776 32 798 5.03e-164 494
MS.gene08830.t1 MTR_2g042130 39.218 793 415 20 21 774 7 771 5.60e-163 491
MS.gene08830.t1 MTR_8g006680 39.973 753 384 21 38 778 29 725 1.21e-162 489
MS.gene08830.t1 MTR_8g005300 39.973 753 384 21 38 778 29 725 1.21e-162 489
MS.gene08830.t1 MTR_8g005640 39.973 753 384 21 38 778 29 725 1.21e-162 489
MS.gene08830.t1 MTR_1g102350 38.812 791 436 19 14 775 5 776 1.69e-161 488
MS.gene08830.t1 MTR_5g016120 39.788 754 414 15 38 773 27 758 4.86e-161 486
MS.gene08830.t1 MTR_8g042670 44.150 641 315 16 152 776 21 634 5.23e-161 481
MS.gene08830.t1 MTR_3g082200 41.793 658 347 16 137 778 12 649 5.07e-160 479
MS.gene08830.t1 MTR_6g055570 39.073 755 395 18 37 778 30 732 6.29e-158 477
MS.gene08830.t1 MTR_8g021130 40.824 752 383 20 58 776 53 775 8.35e-158 478
MS.gene08830.t1 MTR_3g010080 38.303 778 410 18 23 780 9 736 9.07e-158 476
MS.gene08830.t1 MTR_7g081580 39.691 776 409 25 40 776 29 784 1.51e-157 478
MS.gene08830.t1 MTR_7g075890 38.633 761 392 19 39 775 188 897 2.47e-157 481
MS.gene08830.t1 MTR_7g081420 39.440 786 398 23 40 776 29 785 2.73e-157 477
MS.gene08830.t1 MTR_1g048110 39.102 757 393 17 37 778 30 733 3.75e-157 475
MS.gene08830.t1 MTR_8g033150 39.550 756 393 16 39 775 41 751 4.52e-157 475
MS.gene08830.t1 MTR_1g006990 39.028 761 396 20 37 780 30 739 5.64e-157 474
MS.gene08830.t1 MTR_8g033150 39.680 751 389 16 44 775 19 724 9.52e-157 473
MS.gene08830.t1 MTR_7g034380 39.369 729 376 14 63 776 15 692 3.94e-156 471
MS.gene08830.t1 MTR_5g011190 39.697 791 423 17 1 775 1 753 4.81e-156 473
MS.gene08830.t1 MTR_3g464790 41.255 749 382 18 38 775 30 731 1.31e-155 471
MS.gene08830.t1 MTR_3g082200 42.072 637 333 16 158 778 18 634 7.04e-155 466
MS.gene08830.t1 MTR_7g481600 38.710 775 418 22 40 776 29 784 3.59e-153 467
MS.gene08830.t1 MTR_7g081500 38.166 807 418 24 18 776 10 783 5.00e-153 466
MS.gene08830.t1 MTR_5g011370 39.317 791 426 17 1 775 21 773 5.87e-153 465
MS.gene08830.t1 MTR_1g079120 37.357 787 430 22 23 780 13 765 1.05e-152 464
MS.gene08830.t1 MTR_6g055410 38.228 756 382 20 37 778 30 714 1.17e-152 462
MS.gene08830.t1 MTR_1g007030 37.566 756 410 17 38 780 31 737 2.97e-151 459
MS.gene08830.t1 MTR_4g125180 39.091 770 421 19 23 774 11 750 4.35e-151 460
MS.gene08830.t1 MTR_8g079900 38.543 755 401 17 39 775 32 741 1.01e-150 458
MS.gene08830.t1 MTR_4g103495 42.590 641 327 17 158 776 3 624 2.37e-150 454
MS.gene08830.t1 MTR_5g011310 38.763 792 429 18 1 775 1 753 4.30e-150 457
MS.gene08830.t1 MTR_5g085690 38.529 802 422 24 24 775 8 788 2.62e-149 456
MS.gene08830.t1 MTR_4g102400 39.177 753 405 19 40 775 36 752 3.19e-149 455
MS.gene08830.t1 MTR_7g079310 36.629 789 432 21 22 775 8 763 4.52e-149 455
MS.gene08830.t1 MTR_5g011320 39.676 741 404 14 43 775 40 745 6.91e-149 454
MS.gene08830.t1 MTR_7g104200 39.211 760 393 21 44 780 33 746 1.03e-148 453
MS.gene08830.t1 MTR_5g011260 37.664 762 421 18 27 775 31 751 8.20e-148 451
MS.gene08830.t1 MTR_7g081380 38.481 803 404 24 40 776 29 807 7.66e-147 451
MS.gene08830.t1 MTR_7g079300 37.128 773 414 22 41 775 27 765 7.65e-146 447
MS.gene08830.t1 MTR_5g055920 40.713 673 345 18 126 776 27 667 1.35e-145 443
MS.gene08830.t1 MTR_8g005710 37.820 743 380 20 62 778 15 701 1.45e-145 444
MS.gene08830.t1 MTR_8g024380 39.728 735 371 19 67 775 70 758 2.62e-145 445
MS.gene08830.t1 MTR_5g011340 38.927 727 402 12 57 775 58 750 6.79e-145 444
MS.gene08830.t1 MTR_5g011270 38.362 769 417 18 27 782 31 755 1.66e-144 443
MS.gene08830.t1 MTR_8g024390 40.220 726 376 20 81 781 71 763 1.80e-144 443
MS.gene08830.t1 MTR_1g078110 37.885 747 402 17 62 782 50 760 3.05e-144 442
MS.gene08830.t1 MTR_8g024420 39.532 726 379 21 81 781 37 727 1.85e-143 439
MS.gene08830.t1 MTR_3g114410 45.128 585 262 14 37 596 30 580 2.42e-143 434
MS.gene08830.t1 MTR_5g011280 37.981 753 414 18 38 775 41 755 3.20e-142 437
MS.gene08830.t1 MTR_8g079900 39.562 685 352 16 109 775 3 643 1.05e-138 424
MS.gene08830.t1 MTR_8g042710 43.225 583 299 15 36 599 18 587 9.08e-137 420
MS.gene08830.t1 MTR_7g118080 37.009 789 429 21 25 781 9 761 3.11e-135 419
MS.gene08830.t1 MTR_2g044630 36.207 754 388 20 38 776 31 706 3.79e-135 417
MS.gene08830.t1 MTR_8g024370 36.604 795 426 20 24 781 9 762 9.84e-133 412
MS.gene08830.t1 MTR_2g049200 38.272 729 384 19 81 781 71 761 9.92e-129 402
MS.gene08830.t1 MTR_6g075370 35.541 740 359 17 44 764 35 675 7.52e-125 389
MS.gene08830.t1 MTR_2g042640 37.553 711 313 23 37 734 15 607 5.96e-122 379
MS.gene08830.t1 MTR_3g452290 36.391 676 315 18 110 778 4 571 9.52e-114 357
MS.gene08830.t1 MTR_3g451220 36.391 676 315 18 110 778 4 571 9.52e-114 357
MS.gene08830.t1 MTR_2g042650 32.982 758 352 22 38 780 31 647 8.38e-101 325
MS.gene08830.t1 MTR_4g127480 33.333 768 437 27 60 776 71 814 1.89e-93 310
MS.gene08830.t1 MTR_2g037850 33.162 778 446 29 50 773 54 811 2.58e-91 305
MS.gene08830.t1 MTR_4g132620 32.908 784 458 27 38 775 53 814 1.03e-88 297
MS.gene08830.t1 MTR_2g046740 31.291 767 455 24 61 775 92 838 4.55e-86 291
MS.gene08830.t1 MTR_8g089230 31.090 743 448 24 82 775 118 845 6.42e-76 263
MS.gene08830.t1 MTR_8g027260 42.547 369 175 9 17 381 8 343 9.04e-76 258
MS.gene08830.t1 MTR_8g027260 38.889 306 158 6 488 778 363 654 2.35e-55 202
MS.gene08830.t1 MTR_5g081100 36.789 492 239 14 44 532 4 426 1.93e-74 248
MS.gene08830.t1 MTR_7g079295 41.880 351 168 11 41 373 27 359 4.98e-68 234
MS.gene08830.t1 MTR_7g079295 35.099 151 87 5 632 775 363 509 1.79e-14 77.4
MS.gene08830.t1 MTR_3g114160 37.121 396 175 9 78 464 4 334 3.04e-63 216
MS.gene08830.t1 MTR_5g081280 37.309 327 152 10 44 369 23 297 5.46e-58 200
MS.gene08830.t1 MTR_2g070250 33.151 365 189 9 164 528 97 406 4.28e-46 170
MS.gene08830.t1 MTR_8g092940 44.541 229 98 9 80 307 27 227 4.62e-43 156
MS.gene08830.t1 MTR_3g114140 39.847 261 137 8 490 736 169 423 3.28e-41 156
MS.gene08830.t1 MTR_3g114140 45.342 161 58 2 226 386 28 158 3.44e-26 112
MS.gene08830.t1 MTR_2g070260 38.725 204 113 4 565 765 1 195 6.57e-39 144
MS.gene08830.t1 MTR_4g053665 34.118 255 123 5 531 780 1 215 2.60e-34 130
MS.gene08830.t1 MTR_4g126230 35.931 231 126 6 485 704 29 248 1.21e-32 127
MS.gene08830.t1 MTR_5g079315 82.432 74 13 0 293 366 1 74 3.88e-32 119
MS.gene08830.t1 MTR_5g044060 47.794 136 64 2 500 628 1 136 3.22e-27 109
MS.gene08830.t1 MTR_5g081130 35.638 188 99 6 594 775 1 172 4.90e-22 95.1
MS.gene08830.t1 MTR_7g081660 34.118 170 107 4 609 776 387 553 4.33e-20 95.5
MS.gene08830.t1 MTR_1g050640 42.857 84 45 1 40 123 44 124 9.47e-16 75.1
MS.gene08830.t1 MTR_3g114400 33.735 166 87 6 617 775 13 162 1.26e-15 75.5
MS.gene08830.t1 MTR_5g011300 40.625 96 55 1 565 660 1 94 6.17e-15 71.6
MS.gene08830.t1 MTR_8g027660 28.643 199 110 6 589 781 80 252 7.32e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08830.t1 AT1G32960 51.337 748 351 9 37 777 26 767 0.0 753
MS.gene08830.t1 AT4G10550 50.000 764 367 10 23 777 11 768 0.0 744
MS.gene08830.t1 AT4G10550 50.132 758 363 10 29 777 33 784 0.0 741
MS.gene08830.t1 AT4G10540 49.665 747 365 8 37 777 24 765 0.0 739
MS.gene08830.t1 AT4G10520 49.538 757 359 10 24 777 10 746 0.0 738
MS.gene08830.t1 AT1G32940 51.203 748 352 9 37 777 23 764 0.0 733
MS.gene08830.t1 AT1G32950 50.000 768 364 10 20 777 6 763 0.0 724
MS.gene08830.t1 AT4G10510 48.718 780 384 12 10 782 2 772 0.0 723
MS.gene08830.t1 AT4G10510 49.530 745 365 9 43 782 22 760 0.0 721
MS.gene08830.t1 AT4G10550 50.418 718 344 9 66 777 1 712 0.0 709
MS.gene08830.t1 AT4G10550 50.418 718 344 9 66 777 1 712 0.0 709
MS.gene08830.t1 AT4G10530 47.451 765 368 12 19 777 1 737 0.0 701
MS.gene08830.t1 AT4G21650 50.395 760 324 12 38 777 36 762 0.0 701
MS.gene08830.t1 AT1G32940 51.321 719 337 9 66 777 1 713 0.0 700
MS.gene08830.t1 AT1G32940 51.321 719 337 9 66 777 1 713 0.0 700
MS.gene08830.t1 AT4G10510 49.446 722 354 9 66 782 1 716 0.0 693
MS.gene08830.t1 AT1G32950 50.970 722 334 10 66 777 1 712 0.0 692
MS.gene08830.t1 AT4G21630 48.473 786 356 14 9 777 2 755 0.0 681
MS.gene08830.t1 AT4G10510 48.939 707 350 9 81 782 1 701 0.0 674
MS.gene08830.t1 AT5G11940 45.692 766 395 5 19 782 13 759 0.0 674
MS.gene08830.t1 AT1G66220 46.484 768 377 12 17 777 6 746 0.0 668
MS.gene08830.t1 AT4G21640 46.115 785 341 12 12 777 8 729 0.0 644
MS.gene08830.t1 AT1G66210 45.321 748 383 10 37 782 34 757 0.0 635
MS.gene08830.t1 AT4G21323 44.220 744 378 15 43 777 80 795 0.0 594
MS.gene08830.t1 AT1G32970 43.717 764 385 13 19 777 1 724 0.0 589
MS.gene08830.t1 AT1G32940 52.373 569 259 8 37 598 23 586 0.0 567
MS.gene08830.t1 AT2G04160 42.243 767 402 17 34 776 22 771 0.0 558
MS.gene08830.t1 AT1G04110 42.988 763 374 19 51 775 31 770 0.0 548
MS.gene08830.t1 AT4G21326 42.556 712 384 6 66 776 1 688 0.0 542
MS.gene08830.t1 AT1G20160 41.548 775 405 19 24 777 16 763 0.0 539
MS.gene08830.t1 AT4G26330 43.586 725 371 18 73 775 13 721 0.0 537
MS.gene08830.t1 AT1G20160 43.194 720 367 17 79 777 26 724 0.0 536
MS.gene08830.t1 AT4G26330 42.355 739 374 18 73 775 13 735 2.08e-177 527
MS.gene08830.t1 AT5G59810 40.285 772 410 17 30 776 30 775 2.23e-175 523
MS.gene08830.t1 AT4G34980 43.191 727 372 18 73 775 49 758 4.42e-175 522
MS.gene08830.t1 AT5G67360 40.702 769 408 19 29 775 12 754 1.04e-173 518
MS.gene08830.t1 AT1G20150 41.276 768 385 19 44 775 33 770 2.45e-173 518
MS.gene08830.t1 AT5G45650 40.863 788 394 22 39 775 22 788 1.91e-170 511
MS.gene08830.t1 AT5G45650 40.863 788 394 22 39 775 22 788 1.91e-170 511
MS.gene08830.t1 AT3G14067 41.813 739 384 18 62 776 52 768 1.35e-168 506
MS.gene08830.t1 AT3G14240 40.786 738 374 18 80 779 61 773 2.48e-165 497
MS.gene08830.t1 AT2G05920 41.113 737 387 18 63 780 46 754 8.47e-161 485
MS.gene08830.t1 AT5G51750 40.499 721 392 15 74 775 72 774 1.74e-158 480
MS.gene08830.t1 AT5G59090 39.096 752 389 16 38 775 27 723 1.60e-154 468
MS.gene08830.t1 AT5G59090 39.309 753 391 17 38 775 27 728 1.95e-154 468
MS.gene08830.t1 AT5G59090 39.309 753 389 18 38 775 27 726 7.69e-153 464
MS.gene08830.t1 AT4G00230 39.894 752 398 17 38 775 32 743 1.39e-151 461
MS.gene08830.t1 AT5G59130 37.323 777 405 22 23 780 17 730 4.64e-150 456
MS.gene08830.t1 AT5G59120 38.838 757 397 18 39 780 27 732 7.61e-149 453
MS.gene08830.t1 AT5G59130 37.323 777 401 23 23 780 17 726 1.31e-148 452
MS.gene08830.t1 AT5G59130 37.720 737 380 20 63 780 15 691 6.21e-147 447
MS.gene08830.t1 AT3G46850 39.182 758 390 24 38 775 28 734 6.81e-147 448
MS.gene08830.t1 AT5G03620 37.962 785 415 22 24 773 9 756 8.84e-147 449
MS.gene08830.t1 AT5G59130 37.404 778 393 23 23 780 17 720 3.18e-146 446
MS.gene08830.t1 AT5G59190 38.608 733 381 17 62 779 14 692 3.26e-146 445
MS.gene08830.t1 AT1G01900 40.336 714 382 18 83 775 81 771 7.68e-146 447
MS.gene08830.t1 AT5G58840 38.052 770 385 21 25 777 14 708 8.65e-146 445
MS.gene08830.t1 AT3G46840 38.441 757 396 20 38 775 29 734 1.12e-144 442
MS.gene08830.t1 AT5G58830 37.099 779 398 19 13 775 3 705 1.84e-144 441
MS.gene08830.t1 AT5G59100 38.881 751 394 21 43 775 34 737 2.65e-144 442
MS.gene08830.t1 AT5G58820 38.816 760 362 24 39 777 25 702 8.49e-138 424
MS.gene08830.t1 AT4G15040 38.005 742 384 21 51 777 7 687 2.68e-137 422
MS.gene08830.t1 AT4G15040 38.005 742 384 21 51 777 7 687 2.68e-137 422
MS.gene08830.t1 AT5G45640 38.005 742 381 23 90 778 39 754 9.72e-132 409
MS.gene08830.t1 AT5G67090 36.057 771 410 19 19 764 3 715 3.43e-126 394
MS.gene08830.t1 AT5G03620 40.236 594 311 14 24 598 9 577 2.17e-124 385
MS.gene08830.t1 AT4G00230 42.328 567 289 11 38 596 32 568 1.47e-122 380
MS.gene08830.t1 AT5G58840 39.182 587 281 17 25 600 14 535 9.50e-116 361
MS.gene08830.t1 AT1G20160 41.264 538 283 13 24 552 16 529 2.40e-115 360
MS.gene08830.t1 AT2G19170 32.893 757 443 24 64 773 70 808 3.66e-96 317
MS.gene08830.t1 AT2G19170 32.893 757 443 24 64 773 70 808 3.66e-96 317
MS.gene08830.t1 AT2G39850 31.180 805 438 30 36 779 20 769 9.27e-91 302
MS.gene08830.t1 AT1G30600 33.160 769 438 24 61 775 80 826 1.15e-90 303
MS.gene08830.t1 AT4G30020 33.247 770 424 26 64 773 70 809 9.98e-90 300
MS.gene08830.t1 AT4G30020 33.247 770 424 26 64 773 70 809 9.98e-90 300
MS.gene08830.t1 AT4G30020 33.247 770 424 26 64 773 70 809 9.98e-90 300
MS.gene08830.t1 AT4G30020 33.247 770 424 26 64 773 70 809 9.98e-90 300
MS.gene08830.t1 AT1G62340 32.732 776 443 25 60 778 79 832 3.44e-88 296
MS.gene08830.t1 AT5G58840 36.914 512 254 16 25 532 14 460 3.58e-86 281
MS.gene08830.t1 AT5G44530 31.200 750 438 24 82 775 106 833 3.69e-81 277
MS.gene08830.t1 AT4G20430 30.739 771 451 27 63 775 103 848 1.50e-80 276
MS.gene08830.t1 AT4G20430 30.739 771 451 27 63 775 103 848 1.50e-80 276
MS.gene08830.t1 AT4G20430 31.193 763 434 28 63 775 103 824 1.94e-79 273
MS.gene08830.t1 AT5G44530 29.975 794 450 26 63 775 90 858 5.63e-76 264
MS.gene08830.t1 AT1G32980 48.677 189 96 1 561 749 3 190 2.29e-53 183
MS.gene08830.t1 AT5G44530 31.569 510 286 18 82 546 106 597 3.46e-48 181
MS.gene08830.t1 AT5G59110 33.962 159 99 2 623 775 8 166 7.57e-22 94.0
MS.gene08830.t1 AT1G71950 43.902 82 43 1 41 122 47 125 1.83e-15 74.3

Find 174 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTTCAGCTGGAAATTC+TGG 0.217907 4.2:-13398604 MS.gene08830:CDS
CAAAGACTGTTATAGGAAAA+TGG 0.220891 4.2:-13397498 MS.gene08830:CDS
TGGAACCTTCTTCTGATATA+AGG 0.236585 4.2:+13396224 None:intergenic
AGCACCCGGTGTGGACATTT+TGG 0.276373 4.2:-13396840 MS.gene08830:CDS
TTCGAAACGGTTTGAGAAAT+AGG 0.281095 4.2:+13398580 None:intergenic
TCACCTTGCTCTTCTAATAT+AGG 0.283071 4.2:+13397635 None:intergenic
CTTCAGGTTTGGAATTGATA+TGG 0.287368 4.2:+13395985 None:intergenic
AATTATAGAGGCCTTGCTTC+TGG 0.298733 4.2:-13398865 MS.gene08830:CDS
AGAAGAAGGTTCCACAAATA+AGG 0.303939 4.2:-13396215 MS.gene08830:CDS
AAAATGTTATCTTCACTCTT+AGG 0.305045 4.2:-13400083 MS.gene08830:CDS
TTGCATGGTGATTACAGATT+TGG 0.307057 4.2:-13395788 MS.gene08830:CDS
CTAGAAGTTGGGACTTCATT+GGG 0.311848 4.2:-13399739 MS.gene08830:CDS
CTTGATTTCTTGAAGGCATT+TGG 0.311910 4.2:-13399155 MS.gene08830:intron
CCTGCATTGATTGCTTTGTT+AGG 0.315288 4.2:+13396154 None:intergenic
GTTGCAACTTGTAGTGGTTT+TGG 0.315811 4.2:+13396048 None:intergenic
TTAGATGATGGAAACTAATT+CGG 0.323050 4.2:-13400388 None:intergenic
GATCTTCTTGTTACAGTTTG+TGG 0.325361 4.2:+13399044 None:intergenic
AGTGGATTCATATTCTTATC+TGG 0.334970 4.2:-13396785 MS.gene08830:CDS
TTACTGTTGTATGACTCTTC+AGG 0.345235 4.2:+13395969 None:intergenic
GCTATAGTGAATAGTCCTTA+TGG 0.348636 4.2:-13395902 MS.gene08830:CDS
ATCACAGTTGTTTCTTCAGC+TGG 0.356297 4.2:-13398613 MS.gene08830:CDS
TGTTACCAAAGCTGATCTTA+TGG 0.357629 4.2:+13396685 None:intergenic
GATTGCCATCTGTCCATGTT+AGG 0.364733 4.2:+13395762 None:intergenic
GGTGCTAGATGGTTCCTAAA+AGG 0.369584 4.2:-13399018 MS.gene08830:CDS
GTTGTATGACTCTTCAGGTT+TGG 0.378921 4.2:+13395974 None:intergenic
TACTTGCTATATCTTCTGCT+TGG 0.382876 4.2:+13399898 None:intergenic
TGGTATACTTCCGTGCATTA+AGG 0.383715 4.2:-13397688 MS.gene08830:CDS
ACTAGAAGTTGGGACTTCAT+TGG 0.388420 4.2:-13399740 MS.gene08830:CDS
GACCCATGGAACATAGGAAT+TGG 0.390726 4.2:+13396098 None:intergenic
GGCTATACCTTTAGCACAGT+TGG 0.393179 4.2:+13397424 None:intergenic
TGAAATGAAGCTTACGTTGA+AGG 0.396560 4.2:+13395820 None:intergenic
TGGCTATCTACAAAGCTTGC+TGG 0.398566 4.2:-13398810 MS.gene08830:CDS
GGTTTAATATTCAAATTGTA+TGG 0.400861 4.2:+13395709 None:intergenic
GCAGCAGACCCATTTGATAT+CGG 0.401613 4.2:-13396193 MS.gene08830:CDS
CAAACTCCTTTCCACTTGGA+TGG 0.402536 4.2:+13399090 None:intergenic
GATGTCTTAACTGTTTCTCT+TGG 0.405379 4.2:-13398715 MS.gene08830:CDS
TGAGGATACCAATAGCTGTT+AGG 0.408815 4.2:-13395733 MS.gene08830:CDS
TTAACTGTTTCTCTTGGCAT+TGG 0.414235 4.2:-13398709 MS.gene08830:CDS
ACTTGCTATATCTTCTGCTT+GGG 0.417096 4.2:+13399899 None:intergenic
TGAAGTAAGGATTGTCAGTC+TGG 0.419249 4.2:-13397864 MS.gene08830:intron
GATTCTTCTGCAAATATCTC+GGG 0.427428 4.2:+13400288 None:intergenic
GAATTGAAGTTCAAAATTTG+AGG 0.429380 4.2:+13395860 None:intergenic
TTAGGTCAAGGAACCATCAT+AGG 0.431578 4.2:-13399674 MS.gene08830:CDS
TGTATGGTCCTAACAGCTAT+TGG 0.434313 4.2:+13395725 None:intergenic
TGGAAGTAACCTTACTTTGT+GGG 0.434995 4.2:-13398488 MS.gene08830:intron
AGAAACAACTGTGATACCTT+TGG 0.439366 4.2:+13398621 None:intergenic
AACACTCTCTTGGATTTGTC+GGG 0.440791 4.2:-13398372 MS.gene08830:CDS
AGGTGACCAAGTTGGGTGTT+TGG 0.442891 4.2:+13396712 None:intergenic
AAACACTCTCTTGGATTTGT+CGG 0.443935 4.2:-13398373 MS.gene08830:CDS
CAGCAGACCCATTTGATATC+GGG 0.446942 4.2:-13396192 MS.gene08830:CDS
CTTCCAAGTGTAATGGCTGT+TGG 0.449300 4.2:+13398505 None:intergenic
TAGATGATGGAAACTAATTC+GGG 0.450579 4.2:-13400387 MS.gene08830:CDS
TATCCAATTCCTATGTTCCA+TGG 0.450910 4.2:-13396101 MS.gene08830:CDS
GACAATGGAAAACACTCTCT+TGG 0.450936 4.2:-13398382 MS.gene08830:CDS
CTTGTCTCCAACTGTGCTAA+AGG 0.451379 4.2:-13397431 MS.gene08830:intron
AGAAGATCATTGGTGCTAGA+TGG 0.451764 4.2:-13399029 MS.gene08830:CDS
GATGAGAAAGATGCAACTCT+TGG 0.452575 4.2:+13397469 None:intergenic
TGCAGCCATAAGATCAGCTT+TGG 0.453854 4.2:-13396690 MS.gene08830:CDS
TGAAGTTTGTGAATGCCATT+TGG 0.459168 4.2:+13399767 None:intergenic
AGATCAGCTTTGGTAACAAC+AGG 0.460348 4.2:-13396680 MS.gene08830:intron
TTGGAAGTAACCTTACTTTG+TGG 0.460783 4.2:-13398489 MS.gene08830:CDS
CTGTAGTGTCATTGTTTCCA+AGG 0.462626 4.2:+13398968 None:intergenic
GCATCAGTACAGTGTCCAAC+AGG 0.464038 4.2:+13398781 None:intergenic
ATTAAGGTAGATTATGAAGC+AGG 0.465394 4.2:-13397672 MS.gene08830:CDS
TTGATATGGAAGGAAGGTTA+AGG 0.465571 4.2:+13395999 None:intergenic
AACTGTAACAAGAAGATCAT+TGG 0.465970 4.2:-13399039 MS.gene08830:CDS
CAACGCGACACGATAGCAAT+TGG 0.470243 4.2:-13398661 MS.gene08830:CDS
GTAAAGGAAGCTGGTGGAGT+TGG 0.470952 4.2:-13397753 MS.gene08830:CDS
GCCTCTCAAAGCGGAACTGA+TGG 0.471189 4.2:-13396250 MS.gene08830:CDS
CTAGGTGCATATTGTATACA+TGG 0.473758 4.2:-13400153 MS.gene08830:intron
TGGCTGCAGGTGACCAAGTT+GGG 0.475861 4.2:+13396705 None:intergenic
TCATTGAAACTTGCAGACTC+TGG 0.477549 4.2:+13399132 None:intergenic
GTAGTTTCTGTCATTCCAAA+TGG 0.480001 4.2:-13399782 MS.gene08830:CDS
TGTAGCATACCCACAAAGTA+AGG 0.480458 4.2:+13398479 None:intergenic
TGATTCTTCTGCAAATATCT+CGG 0.481072 4.2:+13400287 None:intergenic
CACACTAAGAACCTCATCCT+TGG 0.483752 4.2:-13398985 MS.gene08830:CDS
TGGAAAGGAGTTTGTCAAGT+TGG 0.485654 4.2:-13399081 MS.gene08830:CDS
GTAGAAAATGCAAATTATAG+AGG 0.487178 4.2:-13398877 MS.gene08830:CDS
CTCTCAGCTAGAGATGCTAT+TGG 0.487608 4.2:-13398940 MS.gene08830:CDS
TGTCATTGTTTCCAAGGATG+AGG 0.488136 4.2:+13398974 None:intergenic
ACTTCACACAACTAGAAGTT+GGG 0.489273 4.2:-13399750 MS.gene08830:CDS
TATGCACAGCGTCATGAAGA+TGG 0.492726 4.2:-13397723 MS.gene08830:CDS
TTCTGCAGCACTTACAGTAA+AGG 0.494427 4.2:-13397769 MS.gene08830:CDS
TTGACAAACTCCTTTCCACT+TGG 0.494530 4.2:+13399086 None:intergenic
CACACAGCTTCAACAGCAGC+TGG 0.497918 4.2:-13398907 MS.gene08830:CDS
AACTTCACACAACTAGAAGT+TGG 0.498851 4.2:-13399751 MS.gene08830:CDS
TAAAATCCAAACACCCAACT+TGG 0.501966 4.2:-13396718 MS.gene08830:CDS
TAGCCATGTCAAATGCTTTG+AGG 0.503512 4.2:+13398752 None:intergenic
ACACCGGGTGCTGCTATGTC+CGG 0.508908 4.2:+13396851 None:intergenic
GGCTATCTACAAAGCTTGCT+GGG 0.512176 4.2:-13398809 MS.gene08830:CDS
AAAGCTGATCTTATGGCTGC+AGG 0.512788 4.2:+13396692 None:intergenic
AGGAGCACCTTTAGCTCACT+TGG 0.515626 4.2:-13398830 MS.gene08830:CDS
GATCAACATACGAAAACAAA+GGG 0.515737 4.2:+13398683 None:intergenic
ATGTCTTGTCCTCATGTGGC+AGG 0.515904 4.2:-13396755 MS.gene08830:CDS
TGGGTCTGCTGCCTTATTTG+TGG 0.516001 4.2:+13396204 None:intergenic
AAACAAGAGATGTGCTAGAA+AGG 0.518017 4.2:-13400364 MS.gene08830:CDS
ATCCAATTCCTATGTTCCAT+GGG 0.525074 4.2:-13396100 MS.gene08830:CDS
CCATGGTGCTGTATTCGAAA+CGG 0.533211 4.2:+13398567 None:intergenic
AGTTTCAATGATGAAGCAAT+GGG 0.533726 4.2:-13399120 MS.gene08830:CDS
TAGATAGCCAAGTGAGCTAA+AGG 0.534407 4.2:+13398823 None:intergenic
AAGGTTACTTCCAAGTGTAA+TGG 0.535315 4.2:+13398498 None:intergenic
ATTTCAACTCAAAAGTTGCA+TGG 0.536725 4.2:-13395803 MS.gene08830:CDS
CTGAATGAAACAATGGCAGC+AGG 0.538323 4.2:-13397837 MS.gene08830:CDS
GCTTGCTGGGACGTTCCTGT+TGG 0.538433 4.2:-13398796 MS.gene08830:CDS
CTTCTTTATAGCTATAAACA+TGG 0.540098 4.2:-13399954 MS.gene08830:CDS
GCTAGAGATGCTATTGGCCA+TGG 0.541370 4.2:-13398934 MS.gene08830:CDS
GGAAAACTCAGCCTTGCAGT+TGG 0.542209 4.2:+13397520 None:intergenic
TATTATGACCCATGGAACAT+AGG 0.542775 4.2:+13396092 None:intergenic
TTGTTTGTTGCAACTTGTAG+TGG 0.543136 4.2:+13396042 None:intergenic
CTTTAGCACAGTTGGAGACA+AGG 0.546000 4.2:+13397432 None:intergenic
TTGGAATTGATATGGAAGGA+AGG 0.546129 4.2:+13395993 None:intergenic
TCCATCAGTTCCGCTTTGAG+AGG 0.546581 4.2:+13396249 None:intergenic
TGGATCACGTGCAATGCGCT+CGG 0.546600 4.2:+13398339 None:intergenic
CTTGCTTCTGGTTTAGCAAG+AGG 0.547357 4.2:-13398853 MS.gene08830:CDS
TCTTTCCACGCAACTTCCAA+AGG 0.554837 4.2:-13398637 MS.gene08830:CDS
ATGGCTGCAGGTGACCAAGT+TGG 0.555589 4.2:+13396704 None:intergenic
TTTGGCTGCATTTCCACCCA+AGG 0.561186 4.2:-13396822 MS.gene08830:CDS
AAGTTTCAATGATGAAGCAA+TGG 0.562500 4.2:-13399121 MS.gene08830:CDS
GCACTTACAGTAAAGGAAGC+TGG 0.562837 4.2:-13397762 MS.gene08830:CDS
GGAATGACAGAAACTACCTC+TGG 0.565610 4.2:+13399788 None:intergenic
TTTCCAACAGCCATTACACT+TGG 0.566211 4.2:-13398508 MS.gene08830:CDS
TGTGTCTATGACGCCTATGA+TGG 0.567504 4.2:+13399661 None:intergenic
TGTTATCTTCACTCTTAGGA+AGG 0.567791 4.2:-13400079 MS.gene08830:intron
AGGTTTGGAATTGATATGGA+AGG 0.568145 4.2:+13395989 None:intergenic
TTGAAGCTGTGTGAGTTCCA+TGG 0.569128 4.2:+13398917 None:intergenic
GCTTCTGGTTTAGCAAGAGG+AGG 0.571874 4.2:-13398850 MS.gene08830:CDS
ACTGAAAGCAACTTAGGTCA+AGG 0.574792 4.2:-13399686 MS.gene08830:CDS
ACAGTTGGAGACAAGGTACT+AGG 0.581400 4.2:+13397439 None:intergenic
GGAGGCCTTATATCAGAAGA+AGG 0.582543 4.2:-13396229 MS.gene08830:CDS
CCTAACAAAGCAATCAATGC+AGG 0.582803 4.2:-13396154 MS.gene08830:CDS
GTTGCATCTTTCTCATCTAG+AGG 0.585537 4.2:-13397463 MS.gene08830:CDS
GCGCATTGCACGTGATCCAT+CGG 0.586568 4.2:-13398335 MS.gene08830:CDS
AGCAGACCCATTTGATATCG+GGG 0.587889 4.2:-13396191 MS.gene08830:CDS
AGATGCTGTATTATGACCCA+TGG 0.590460 4.2:+13396084 None:intergenic
TCTCAAAGCGGAACTGATGG+AGG 0.593016 4.2:-13396247 MS.gene08830:CDS
ATCAATGTCTTGTCCTCATG+TGG 0.603786 4.2:-13396759 MS.gene08830:CDS
AAAATTCCATCCAAGTGGAA+AGG 0.604125 4.2:-13399096 MS.gene08830:CDS
TGCAGCCAAAATGTCCACAC+CGG 0.604840 4.2:+13396835 None:intergenic
ACCATGGCTCATTACAGTTG+CGG 0.605785 4.2:-13398551 MS.gene08830:CDS
GGAAGCCTAACATGGACAGA+TGG 0.610473 4.2:-13395767 MS.gene08830:CDS
ACAGATTTGGAAGCCTAACA+TGG 0.611247 4.2:-13395775 MS.gene08830:CDS
TTGGCTGCATTTCCACCCAA+GGG 0.612405 4.2:-13396821 MS.gene08830:CDS
CAGGGACAGTCCATTGACAA+TGG 0.614731 4.2:-13398397 MS.gene08830:CDS
GTGGAAGGTTTCCAACTGCA+AGG 0.614861 4.2:-13397531 MS.gene08830:intron
TGATCAACATACGAAAACAA+AGG 0.622316 4.2:+13398682 None:intergenic
CTCTTGCTAAACCAGAAGCA+AGG 0.626020 4.2:+13398854 None:intergenic
ATTCTTCTGCAAATATCTCG+GGG 0.626292 4.2:+13400289 None:intergenic
TAACCTATATTAGAAGAGCA+AGG 0.627264 4.2:-13397638 MS.gene08830:intron
TTAAGGTAGATTATGAAGCA+GGG 0.632035 4.2:-13397671 MS.gene08830:CDS
TTGCGGCCACTACAATCGAT+AGG 0.633312 4.2:-13398534 MS.gene08830:CDS
TCATAATCTACCTTAATGCA+CGG 0.633313 4.2:+13397678 None:intergenic
TAGCCGGACATAGCAGCACC+CGG 0.633717 4.2:-13396854 MS.gene08830:CDS
ATGAGAACAGTGACAAACGT+TGG 0.635977 4.2:-13395947 MS.gene08830:CDS
TAGAAGTTGGGACTTCATTG+GGG 0.636639 4.2:-13399738 MS.gene08830:CDS
GCAGCCAAAATGTCCACACC+GGG 0.637864 4.2:+13396836 None:intergenic
GCTGCTATTCCTGCCACATG+AGG 0.638035 4.2:+13396746 None:intergenic
GGACATAGCAGCACCCGGTG+TGG 0.639225 4.2:-13396849 MS.gene08830:CDS
TGGAAGTCTGAATGAAACAA+TGG 0.642638 4.2:-13397844 MS.gene08830:CDS
TGATACCTTTGGAAGTTGCG+TGG 0.649399 4.2:+13398632 None:intergenic
AAAAGTCCTATCGATTGTAG+TGG 0.654640 4.2:+13398528 None:intergenic
ATCATAGGCGTCATAGACAC+AGG 0.655865 4.2:-13399659 MS.gene08830:intron
TCTCACGCTAAATCATCCGA+TGG 0.656781 4.2:+13398319 None:intergenic
GCAGACCCATTTGATATCGG+GGG 0.659152 4.2:-13396190 MS.gene08830:CDS
TAGGTGCATATTGTATACAT+GGG 0.667259 4.2:-13400152 MS.gene08830:CDS
GCCGCAACTGTAATGAGCCA+TGG 0.676151 4.2:+13398550 None:intergenic
TATCCTCAAAGCATTTGACA+TGG 0.678885 4.2:-13398755 MS.gene08830:CDS
AAAAGTGCAGCCTCTCAAAG+CGG 0.681198 4.2:-13396259 MS.gene08830:intron
CTTACAGTAAAGGAAGCTGG+TGG 0.703562 4.2:-13397759 MS.gene08830:CDS
GAAGATGGACTCAATGAATG+TGG 0.703870 4.2:-13397708 MS.gene08830:CDS
GAATTGGATATAATCCTCTG+TGG 0.708669 4.2:+13396114 None:intergenic
ATACAATGTAGAGTTTCCAG+AGG 0.721115 4.2:-13399804 MS.gene08830:intron
CATATACAACATTACCACAG+AGG 0.731399 4.2:-13396128 MS.gene08830:CDS
TTTGACATGGCTATACACGA+TGG 0.741019 4.2:-13398742 MS.gene08830:CDS
CCGTTTCGAATACAGCACCA+TGG 0.744343 4.2:-13398567 MS.gene08830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATTATTATGTCAA+CGG + chr4.2:13397974-13397993 None:intergenic 10.0%
!! TTAATGTAATGATAATTATT+AGG + chr4.2:13396075-13396094 None:intergenic 10.0%
!!! GAGATTTTATATATATATTT+AGG + chr4.2:13398173-13398192 None:intergenic 10.0%
!!! TATTTTATAAAGAAAAGTTT+AGG + chr4.2:13399758-13399777 None:intergenic 10.0%
!! ATTGAAATTTGAAGATAATT+TGG + chr4.2:13399484-13399503 None:intergenic 15.0%
!! TAACAAAAAATCTTAGAATT+TGG - chr4.2:13398885-13398904 MS.gene08830:CDS 15.0%
!! TTAAAAACTAATCTTAATCA+TGG + chr4.2:13396239-13396258 None:intergenic 15.0%
!!! AATATTTTTTGTTGAAAACT+CGG - chr4.2:13397984-13398003 MS.gene08830:intron 15.0%
!!! AGCATTATATTTTTGTTTTA+TGG + chr4.2:13399157-13399176 None:intergenic 15.0%
!!! GAAGTTATTTATTTTTACTT+TGG + chr4.2:13399574-13399593 None:intergenic 15.0%
!!! GTTCTTTTATTTAATTTTGT+TGG + chr4.2:13398969-13398988 None:intergenic 15.0%
!!! TTTAAAAAAGTGCTAAAAAT+AGG + chr4.2:13396263-13396282 None:intergenic 15.0%
!! AAAAATATAATGCTCTTACA+TGG - chr4.2:13399163-13399182 MS.gene08830:intron 20.0%
!! AAAAGTAAATAGAGAATTGT+TGG - chr4.2:13398767-13398786 MS.gene08830:CDS 20.0%
!! AAATTTGAAGATAATTTGGA+TGG + chr4.2:13399480-13399499 None:intergenic 20.0%
!! ACTAAATAAATGTCTATTTG+AGG - chr4.2:13399100-13399119 MS.gene08830:CDS 20.0%
!! TTAATATTATTAAGCTCATG+TGG - chr4.2:13398546-13398565 MS.gene08830:CDS 20.0%
!!! ATGATATCAATATGTTTTCA+AGG - chr4.2:13399019-13399038 MS.gene08830:CDS 20.0%
!!! CTAAGATTTTTTGTTATGTT+TGG + chr4.2:13398881-13398900 None:intergenic 20.0%
!!! CTAGTTAGTTTTGATATTAT+TGG + chr4.2:13399806-13399825 None:intergenic 20.0%
! AAAATGTTATCTTCACTCTT+AGG - chr4.2:13396013-13396032 MS.gene08830:CDS 25.0%
! AACTAATCTTAATCATGGTA+AGG + chr4.2:13396234-13396253 None:intergenic 25.0%
! ACCTTAAAATTCTTACTTGT+AGG - chr4.2:13398697-13398716 MS.gene08830:CDS 25.0%
! AGATATAGCAAGTATGAATA+TGG - chr4.2:13396207-13396226 MS.gene08830:CDS 25.0%
! CAAACACTAGAAAATGAAAA+TGG - chr4.2:13396676-13396695 MS.gene08830:intron 25.0%
! CAAGAAATCAAGTTTATCAT+TGG + chr4.2:13396933-13396952 None:intergenic 25.0%
! CAATTACTACAAACTAAAGT+TGG + chr4.2:13395847-13395866 None:intergenic 25.0%
! CAATTGTTTAAACTAATAGC+CGG + chr4.2:13398825-13398844 None:intergenic 25.0%
! CTTCTTTATAGCTATAAACA+TGG - chr4.2:13396142-13396161 MS.gene08830:CDS 25.0%
! GAATTGAAGTTCAAAATTTG+AGG + chr4.2:13400239-13400258 None:intergenic 25.0%
! GTAGAAAATGCAAATTATAG+AGG - chr4.2:13397219-13397238 MS.gene08830:intron 25.0%
! TCTAGAGAAGAATTCAAATA+GGG + chr4.2:13397877-13397896 None:intergenic 25.0%
! TGATAAACTTGATTTCTTGA+AGG - chr4.2:13396934-13396953 MS.gene08830:intron 25.0%
! TTTATTAAATGCATGTTCCT+AGG - chr4.2:13395925-13395944 MS.gene08830:CDS 25.0%
!! AAAATGGATTTCTTGCAATA+CGG - chr4.2:13396692-13396711 MS.gene08830:CDS 25.0%
!! ACAGAAAGTAATTTTTGTGT+TGG - chr4.2:13399517-13399536 MS.gene08830:intron 25.0%
!! ACCTACAAGTAAGAATTTTA+AGG + chr4.2:13398701-13398720 None:intergenic 25.0%
!! ATTTTACTCTTGGAATAAGT+AGG - chr4.2:13398141-13398160 MS.gene08830:intron 25.0%
!! CTTACATGGTTTTCAATTTA+TGG - chr4.2:13399177-13399196 MS.gene08830:intron 25.0%
!! GTTTTCATTTTCAAATGCTT+TGG + chr4.2:13396488-13396507 None:intergenic 25.0%
!! TTCTAGAGAAGAATTCAAAT+AGG + chr4.2:13397878-13397897 None:intergenic 25.0%
!! TTTAGAAAGAAAAGCACAAT+CGG - chr4.2:13398799-13398818 MS.gene08830:CDS 25.0%
!!! ACAAGTAAGAATTTTAAGGT+TGG + chr4.2:13398697-13398716 None:intergenic 25.0%
!!! CAAGTAAGAATTTTAAGGTT+GGG + chr4.2:13398696-13398715 None:intergenic 25.0%
!!! CATTTTCATTTTCTAGTGTT+TGG + chr4.2:13396678-13396697 None:intergenic 25.0%
!!! TTTTTGTTATGTTTGGTTGA+AGG + chr4.2:13398874-13398893 None:intergenic 25.0%
AACTGTAACAAGAAGATCAT+TGG - chr4.2:13397057-13397076 MS.gene08830:intron 30.0%
AAGTTTCAATGATGAAGCAA+TGG - chr4.2:13396975-13396994 MS.gene08830:intron 30.0%
ACAGTTGATTGATATAATGC+AGG - chr4.2:13397680-13397699 MS.gene08830:CDS 30.0%
ACTATGAAATGAAGTAACTC+TGG - chr4.2:13398115-13398134 MS.gene08830:intron 30.0%
AGTTTCAATGATGAAGCAAT+GGG - chr4.2:13396976-13396995 MS.gene08830:intron 30.0%
ATCCTACAATACTACAGATA+TGG + chr4.2:13398945-13398964 None:intergenic 30.0%
ATTAAGGTAGATTATGAAGC+AGG - chr4.2:13398424-13398443 MS.gene08830:intron 30.0%
ATTTCAACTCAAAAGTTGCA+TGG - chr4.2:13400293-13400312 MS.gene08830:CDS 30.0%
ATTTGGATTAAGTCTAACTC+AGG - chr4.2:13398902-13398921 MS.gene08830:CDS 30.0%
CAAAGACTGTTATAGGAAAA+TGG - chr4.2:13398598-13398617 MS.gene08830:CDS 30.0%
CAAATTTCAGAAACATGATC+TGG + chr4.2:13398742-13398761 None:intergenic 30.0%
CAACTACTTCTGTATCAAAT+TGG - chr4.2:13397638-13397657 MS.gene08830:intron 30.0%
CAGTTGATTGATATAATGCA+GGG - chr4.2:13397681-13397700 MS.gene08830:CDS 30.0%
CTGAAATTTCTGATCTTAAC+CGG + chr4.2:13396550-13396569 None:intergenic 30.0%
CTGAGTTGTTTGATCTTAAT+TGG + chr4.2:13396756-13396775 None:intergenic 30.0%
GATCAACATACGAAAACAAA+GGG + chr4.2:13397416-13397435 None:intergenic 30.0%
GTTGTTTGATCTTAATTGGA+CGG + chr4.2:13396752-13396771 None:intergenic 30.0%
TAACCTATATTAGAAGAGCA+AGG - chr4.2:13398458-13398477 MS.gene08830:intron 30.0%
TACACAAAATCCCTAGAAAA+CGG - chr4.2:13396894-13396913 MS.gene08830:intron 30.0%
TAGGTGCATATTGTATACAT+GGG - chr4.2:13395944-13395963 MS.gene08830:CDS 30.0%
TATGCATAGATTGACAAGAT+TGG - chr4.2:13398496-13398515 MS.gene08830:CDS 30.0%
TATTATTAAGCTCATGTGGA+AGG - chr4.2:13398550-13398569 MS.gene08830:CDS 30.0%
TCATAATCTACCTTAATGCA+CGG + chr4.2:13398421-13398440 None:intergenic 30.0%
TGATCAACATACGAAAACAA+AGG + chr4.2:13397417-13397436 None:intergenic 30.0%
TGATTCTTCTGCAAATATCT+CGG + chr4.2:13395812-13395831 None:intergenic 30.0%
TGTAAAAGTTTAGGTGAGTT+GGG + chr4.2:13399684-13399703 None:intergenic 30.0%
TTAAGGTAGATTATGAAGCA+GGG - chr4.2:13398425-13398444 MS.gene08830:intron 30.0%
TTGTAAAAGTTTAGGTGAGT+TGG + chr4.2:13399685-13399704 None:intergenic 30.0%
TTTGGTTGGATATTTGTAAG+AGG + chr4.2:13396470-13396489 None:intergenic 30.0%
! AAATGGATTTCTTGCAATAC+GGG - chr4.2:13396693-13396712 MS.gene08830:CDS 30.0%
! AGAGTGAAGATAACATTTTG+TGG + chr4.2:13396012-13396031 None:intergenic 30.0%
! AGCTATAAACATGGATTTTC+AGG - chr4.2:13396151-13396170 MS.gene08830:CDS 30.0%
! AGTGGATTCATATTCTTATC+TGG - chr4.2:13399311-13399330 MS.gene08830:intron 30.0%
! AGTTTTCCAAAGACTGTTAT+AGG - chr4.2:13398591-13398610 MS.gene08830:CDS 30.0%
! CATTTTCCTATAACAGTCTT+TGG + chr4.2:13398600-13398619 None:intergenic 30.0%
! GCTATAAACATGGATTTTCA+GGG - chr4.2:13396152-13396171 MS.gene08830:CDS 30.0%
! TAAATAGAGAATTGTTGGCT+AGG - chr4.2:13398772-13398791 MS.gene08830:CDS 30.0%
! TCATTTTCAAATGCTTTGGT+TGG + chr4.2:13396484-13396503 None:intergenic 30.0%
! TGTGATCAGTTATTCCTTTT+AGG + chr4.2:13397095-13397114 None:intergenic 30.0%
! TTCAGTGAAAACAGTTTTTG+AGG + chr4.2:13396396-13396415 None:intergenic 30.0%
! TTTTTAAATGCGATTTACCG+AGG - chr4.2:13396797-13396816 MS.gene08830:CDS 30.0%
!! ACTCTCACTTTTATACCATA+AGG + chr4.2:13400212-13400231 None:intergenic 30.0%
!! TGATACTTTTTAGCAGTTTC+TGG + chr4.2:13395989-13396008 None:intergenic 30.0%
!! TTCATTTTCTAGTGTTTGGT+TGG + chr4.2:13396674-13396693 None:intergenic 30.0%
!!! GACAACTCATATTTTAACCT+CGG + chr4.2:13396817-13396836 None:intergenic 30.0%
AAAATTCCATCCAAGTGGAA+AGG - chr4.2:13397000-13397019 MS.gene08830:intron 35.0%
AAACAAGAGATGTGCTAGAA+AGG - chr4.2:13395732-13395751 MS.gene08830:CDS 35.0%
AAACACTCTCTTGGATTTGT+CGG - chr4.2:13397723-13397742 MS.gene08830:CDS 35.0%
AACTTCACACAACTAGAAGT+TGG - chr4.2:13396345-13396364 MS.gene08830:intron 35.0%
AAGGTTACTTCCAAGTGTAA+TGG + chr4.2:13397601-13397620 None:intergenic 35.0%
ACTGACAATCCTTACTTCAA+AGG + chr4.2:13398231-13398250 None:intergenic 35.0%
ACTTCACACAACTAGAAGTT+GGG - chr4.2:13396346-13396365 MS.gene08830:intron 35.0%
AGAAACAACTGTGATACCTT+TGG + chr4.2:13397478-13397497 None:intergenic 35.0%
AGAAGAAGGTTCCACAAATA+AGG - chr4.2:13399881-13399900 MS.gene08830:intron 35.0%
ATACAATGTAGAGTTTCCAG+AGG - chr4.2:13396292-13396311 MS.gene08830:intron 35.0%
ATCCAATTCCTATGTTCCAT+GGG - chr4.2:13399996-13400015 MS.gene08830:intron 35.0%
ATGAGTTGTCCAGTGAAAAT+TGG - chr4.2:13396827-13396846 MS.gene08830:CDS 35.0%
ATTCTTCTGCAAATATCTCG+GGG + chr4.2:13395810-13395829 None:intergenic 35.0%
CATATACAACATTACCACAG+AGG - chr4.2:13399968-13399987 MS.gene08830:CDS 35.0%
CATGTATACAATATGCACCT+AGG + chr4.2:13395945-13395964 None:intergenic 35.0%
CGAACATCAACATAGTTGTT+TGG - chr4.2:13399447-13399466 MS.gene08830:intron 35.0%
CTAGGTGCATATTGTATACA+TGG - chr4.2:13395943-13395962 MS.gene08830:CDS 35.0%
CTTCTTCATACACACAAACA+CGG - chr4.2:13397809-13397828 MS.gene08830:CDS 35.0%
GAATTGGATATAATCCTCTG+TGG + chr4.2:13399985-13400004 None:intergenic 35.0%
GATCTTCTTGTTACAGTTTG+TGG + chr4.2:13397055-13397074 None:intergenic 35.0%
GATTCTTCTGCAAATATCTC+GGG + chr4.2:13395811-13395830 None:intergenic 35.0%
GCTATAGTGAATAGTCCTTA+TGG - chr4.2:13400194-13400213 MS.gene08830:intron 35.0%
GGTGGCTATACAATATTCAA+CGG - chr4.2:13398061-13398080 MS.gene08830:intron 35.0%
GTAGTTTCTGTCATTCCAAA+TGG - chr4.2:13396314-13396333 MS.gene08830:intron 35.0%
GTTATATATTGCTTCTCTGC+TGG + chr4.2:13399051-13399070 None:intergenic 35.0%
TAAAATCCAAACACCCAACT+TGG - chr4.2:13399378-13399397 MS.gene08830:intron 35.0%
TATATTAGAAGAGCAAGGTG+AGG - chr4.2:13398463-13398482 MS.gene08830:intron 35.0%
TATCCAATTCCTATGTTCCA+TGG - chr4.2:13399995-13400014 MS.gene08830:intron 35.0%
TATTATGACCCATGGAACAT+AGG + chr4.2:13400007-13400026 None:intergenic 35.0%
TCACCTTGCTCTTCTAATAT+AGG + chr4.2:13398464-13398483 None:intergenic 35.0%
TGAAATGAAGCTTACGTTGA+AGG + chr4.2:13400279-13400298 None:intergenic 35.0%
TGAAGTTTGTGAATGCCATT+TGG + chr4.2:13396332-13396351 None:intergenic 35.0%
TGCCATATCTGTAGTATTGT+AGG - chr4.2:13398940-13398959 MS.gene08830:CDS 35.0%
TGGAACCTTCTTCTGATATA+AGG + chr4.2:13399875-13399894 None:intergenic 35.0%
TGGAAGTAACCTTACTTTGT+GGG - chr4.2:13397608-13397627 MS.gene08830:intron 35.0%
TGGAAGTCTGAATGAAACAA+TGG - chr4.2:13398252-13398271 MS.gene08830:intron 35.0%
TGTGTATGAAGAAGGAAGAA+AGG + chr4.2:13397803-13397822 None:intergenic 35.0%
TGTTACCAAAGCTGATCTTA+TGG + chr4.2:13399414-13399433 None:intergenic 35.0%
TGTTATCTTCACTCTTAGGA+AGG - chr4.2:13396017-13396036 MS.gene08830:CDS 35.0%
TTACTGTTGTATGACTCTTC+AGG + chr4.2:13400130-13400149 None:intergenic 35.0%
TTCGAAACGGTTTGAGAAAT+AGG + chr4.2:13397519-13397538 None:intergenic 35.0%
TTCTTCATACACACAAACAC+GGG - chr4.2:13397810-13397829 MS.gene08830:CDS 35.0%
TTGATATGGAAGGAAGGTTA+AGG + chr4.2:13400100-13400119 None:intergenic 35.0%
TTGCATGGTGATTACAGATT+TGG - chr4.2:13400308-13400327 MS.gene08830:CDS 35.0%
TTGGAAGTAACCTTACTTTG+TGG - chr4.2:13397607-13397626 MS.gene08830:intron 35.0%
TTGGAATTGATATGGAAGGA+AGG + chr4.2:13400106-13400125 None:intergenic 35.0%
! AAAAGTCCTATCGATTGTAG+TGG + chr4.2:13397571-13397590 None:intergenic 35.0%
! ACTCTGGCAAATTTTACTCT+TGG - chr4.2:13398131-13398150 MS.gene08830:intron 35.0%
! AGGTTTGGAATTGATATGGA+AGG + chr4.2:13400110-13400129 None:intergenic 35.0%
! CTTCAGGTTTGGAATTGATA+TGG + chr4.2:13400114-13400133 None:intergenic 35.0%
! GAGAAATTCGATTTGAGTGA+AGG - chr4.2:13399071-13399090 MS.gene08830:CDS 35.0%
! GATGTCTTAACTGTTTCTCT+TGG - chr4.2:13397381-13397400 MS.gene08830:intron 35.0%
! GTTTTCACTGAAAGCAACTT+AGG - chr4.2:13396404-13396423 MS.gene08830:intron 35.0%
! TATCCTCAAAGCATTTGACA+TGG - chr4.2:13397341-13397360 MS.gene08830:intron 35.0%
! TTAACTGTTTCTCTTGGCAT+TGG - chr4.2:13397387-13397406 MS.gene08830:intron 35.0%
! TTGTTTGTTGCAACTTGTAG+TGG + chr4.2:13400057-13400076 None:intergenic 35.0%
!! ACTTGCTATATCTTCTGCTT+GGG + chr4.2:13396200-13396219 None:intergenic 35.0%
!! AGAGTGTTTTCCATTGTCAA+TGG + chr4.2:13397712-13397731 None:intergenic 35.0%
!! AGTGAAAACAGTTTTTGAGG+AGG + chr4.2:13396393-13396412 None:intergenic 35.0%
!! CTATGTCTTCCTTTGAAGTA+AGG - chr4.2:13398219-13398238 MS.gene08830:intron 35.0%
!! CTTGATTTCTTGAAGGCATT+TGG - chr4.2:13396941-13396960 MS.gene08830:intron 35.0%
!! GTGAAAACAGTTTTTGAGGA+GGG + chr4.2:13396392-13396411 None:intergenic 35.0%
!! TACTTGCTATATCTTCTGCT+TGG + chr4.2:13396201-13396220 None:intergenic 35.0%
AACACTCTCTTGGATTTGTC+GGG - chr4.2:13397724-13397743 MS.gene08830:CDS 40.0%
AAGGGAAGTAAAAAGAGCAG+TGG - chr4.2:13399293-13399312 MS.gene08830:intron 40.0%
AATTATAGAGGCCTTGCTTC+TGG - chr4.2:13397231-13397250 MS.gene08830:intron 40.0%
ACAGATTTGGAAGCCTAACA+TGG - chr4.2:13400321-13400340 MS.gene08830:CDS 40.0%
ACTAGAAGTTGGGACTTCAT+TGG - chr4.2:13396356-13396375 MS.gene08830:intron 40.0%
ACTGAAAGCAACTTAGGTCA+AGG - chr4.2:13396410-13396429 MS.gene08830:intron 40.0%
AGAACCGACTAATCCTATAG+AGG - chr4.2:13398018-13398037 MS.gene08830:intron 40.0%
AGATGCTGTATTATGACCCA+TGG + chr4.2:13400015-13400034 None:intergenic 40.0%
ATCAATGTCTTGTCCTCATG+TGG - chr4.2:13399337-13399356 MS.gene08830:intron 40.0%
ATCATAACCTGCACTCTTCT+GGG - chr4.2:13399204-13399223 MS.gene08830:intron 40.0%
ATGAGAACAGTGACAAACGT+TGG - chr4.2:13400149-13400168 MS.gene08830:CDS 40.0%
CATTCATGCAGTCAGCAAAT+CGG - chr4.2:13396518-13396537 MS.gene08830:intron 40.0%
CATTCATGCTGTCAGCAATT+TGG - chr4.2:13396724-13396743 MS.gene08830:CDS 40.0%
CCTAACAAAGCAATCAATGC+AGG - chr4.2:13399942-13399961 MS.gene08830:CDS 40.0%
CGTGTTTGTGTGTATGAAGA+AGG + chr4.2:13397811-13397830 None:intergenic 40.0%
CTAGAAGTTGGGACTTCATT+GGG - chr4.2:13396357-13396376 MS.gene08830:intron 40.0%
CTGAGTCATCCGATGAAAAT+CGG - chr4.2:13396621-13396640 MS.gene08830:intron 40.0%
GAATGACTGATGGAAATAGC+CGG - chr4.2:13399226-13399245 MS.gene08830:intron 40.0%
GACAATGGAAAACACTCTCT+TGG - chr4.2:13397714-13397733 MS.gene08830:CDS 40.0%
GATGAGAAAGATGCAACTCT+TGG + chr4.2:13398630-13398649 None:intergenic 40.0%
GGCTATACAATATTCAACGG+TGG - chr4.2:13398064-13398083 MS.gene08830:intron 40.0%
GTTGCATCTTTCTCATCTAG+AGG - chr4.2:13398633-13398652 MS.gene08830:CDS 40.0%
GTTGTCCAGTGAAAATTGGA+TGG - chr4.2:13396831-13396850 MS.gene08830:CDS 40.0%
GTTTCTTCAGCTGGAAATTC+TGG - chr4.2:13397492-13397511 MS.gene08830:CDS 40.0%
TAGAAGTTGGGACTTCATTG+GGG - chr4.2:13396358-13396377 MS.gene08830:intron 40.0%
TAGATAGCCAAGTGAGCTAA+AGG + chr4.2:13397276-13397295 None:intergenic 40.0%
TAGCCATGTCAAATGCTTTG+AGG + chr4.2:13397347-13397366 None:intergenic 40.0%
TCATTGAAACTTGCAGACTC+TGG + chr4.2:13396967-13396986 None:intergenic 40.0%
TCTTCACTCTTAGGAAGGTA+TGG - chr4.2:13396022-13396041 MS.gene08830:CDS 40.0%
TGAAGTAAGGATTGTCAGTC+TGG - chr4.2:13398232-13398251 MS.gene08830:intron 40.0%
TGAGGATACCAATAGCTGTT+AGG - chr4.2:13400363-13400382 MS.gene08830:CDS 40.0%
TGGAAAGGAGTTTGTCAAGT+TGG - chr4.2:13397015-13397034 MS.gene08830:intron 40.0%
TGGATTAAGTCTAACTCAGG+TGG - chr4.2:13398905-13398924 MS.gene08830:CDS 40.0%
TGGGAAAAATTCCATCCAAG+TGG - chr4.2:13396995-13397014 MS.gene08830:intron 40.0%
TGGTATACTTCCGTGCATTA+AGG - chr4.2:13398408-13398427 MS.gene08830:intron 40.0%
TGTAGCATACCCACAAAGTA+AGG + chr4.2:13397620-13397639 None:intergenic 40.0%
TGTATGGTCCTAACAGCTAT+TGG + chr4.2:13400374-13400393 None:intergenic 40.0%
TGTCATTGTTTCCAAGGATG+AGG + chr4.2:13397125-13397144 None:intergenic 40.0%
TTAGGTCAAGGAACCATCAT+AGG - chr4.2:13396422-13396441 MS.gene08830:intron 40.0%
TTCTGCAGCACTTACAGTAA+AGG - chr4.2:13398327-13398346 MS.gene08830:CDS 40.0%
TTGACAAACTCCTTTCCACT+TGG + chr4.2:13397013-13397032 None:intergenic 40.0%
TTTCCAACAGCCATTACACT+TGG - chr4.2:13397588-13397607 MS.gene08830:intron 40.0%
TTTGACATGGCTATACACGA+TGG - chr4.2:13397354-13397373 MS.gene08830:intron 40.0%
! AAGGCCTCTATAGGATTAGT+CGG + chr4.2:13398025-13398044 None:intergenic 40.0%
! ACTGCTCTTTTTACTTCCCT+TGG + chr4.2:13399294-13399313 None:intergenic 40.0%
! AGATCAGCTTTGGTAACAAC+AGG - chr4.2:13399416-13399435 MS.gene08830:intron 40.0%
! CAGATGGCAATCATTTTGTG+AGG - chr4.2:13400345-13400364 MS.gene08830:CDS 40.0%
! CTGCTCTTTTTACTTCCCTT+GGG + chr4.2:13399293-13399312 None:intergenic 40.0%
! CTGTAGTGTCATTGTTTCCA+AGG + chr4.2:13397131-13397150 None:intergenic 40.0%
! CTTCACCATCCAATTTTCAC+TGG + chr4.2:13396839-13396858 None:intergenic 40.0%
! GAAAATCGGATGGTGCTAAT+TGG - chr4.2:13396635-13396654 MS.gene08830:intron 40.0%
! GAAGATGGACTCAATGAATG+TGG - chr4.2:13398388-13398407 MS.gene08830:CDS 40.0%
! GTTGCAACTTGTAGTGGTTT+TGG + chr4.2:13400051-13400070 None:intergenic 40.0%
! GTTGTATGACTCTTCAGGTT+TGG + chr4.2:13400125-13400144 None:intergenic 40.0%
! TAGCACCATCCGATTTTCAT+CGG + chr4.2:13396633-13396652 None:intergenic 40.0%
! TCTAGGGATTTTGTGTAGTC+AGG + chr4.2:13396891-13396910 None:intergenic 40.0%
! TTTAGGTGAGTTGGGTCTTA+GGG + chr4.2:13399676-13399695 None:intergenic 40.0%
!! ACATTACAACGCCGTTTTCT+AGG + chr4.2:13396908-13396927 None:intergenic 40.0%
!! AGAAGATCATTGGTGCTAGA+TGG - chr4.2:13397067-13397086 MS.gene08830:intron 40.0%
!! ATCACAGTTGTTTCTTCAGC+TGG - chr4.2:13397483-13397502 MS.gene08830:CDS 40.0%
!! CATTACAACGCCGTTTTCTA+GGG + chr4.2:13396907-13396926 None:intergenic 40.0%
!! CCTGCATTGATTGCTTTGTT+AGG + chr4.2:13399945-13399964 None:intergenic 40.0%
!! CTATAGGATTAGTCGGTTCT+TGG + chr4.2:13398018-13398037 None:intergenic 40.0%
AAAGCTGATCTTATGGCTGC+AGG + chr4.2:13399407-13399426 None:intergenic 45.0%
ACCATGGCTCATTACAGTTG+CGG - chr4.2:13397545-13397564 MS.gene08830:intron 45.0%
AGCAGACCCATTTGATATCG+GGG - chr4.2:13399905-13399924 MS.gene08830:CDS 45.0%
ATCATAGGCGTCATAGACAC+AGG - chr4.2:13396437-13396456 MS.gene08830:intron 45.0%
CAAACTCCTTTCCACTTGGA+TGG + chr4.2:13397009-13397028 None:intergenic 45.0%
CACACTAAGAACCTCATCCT+TGG - chr4.2:13397111-13397130 MS.gene08830:intron 45.0%
CAGCAGACCCATTTGATATC+GGG - chr4.2:13399904-13399923 MS.gene08830:CDS 45.0%
CATCATAACCTGCACTCTTC+TGG - chr4.2:13399203-13399222 MS.gene08830:intron 45.0%
CTCTCAGCTAGAGATGCTAT+TGG - chr4.2:13397156-13397175 MS.gene08830:intron 45.0%
CTCTTGCTAAACCAGAAGCA+AGG + chr4.2:13397245-13397264 None:intergenic 45.0%
CTGAATGAAACAATGGCAGC+AGG - chr4.2:13398259-13398278 MS.gene08830:intron 45.0%
CTTACAGTAAAGGAAGCTGG+TGG - chr4.2:13398337-13398356 MS.gene08830:CDS 45.0%
CTTCCAAGTGTAATGGCTGT+TGG + chr4.2:13397594-13397613 None:intergenic 45.0%
CTTGTCTCCAACTGTGCTAA+AGG - chr4.2:13398665-13398684 MS.gene08830:CDS 45.0%
CTTTAGCACAGTTGGAGACA+AGG + chr4.2:13398667-13398686 None:intergenic 45.0%
GACCCATGGAACATAGGAAT+TGG + chr4.2:13400001-13400020 None:intergenic 45.0%
GATTGCCATCTGTCCATGTT+AGG + chr4.2:13400337-13400356 None:intergenic 45.0%
GCACTTACAGTAAAGGAAGC+TGG - chr4.2:13398334-13398353 MS.gene08830:CDS 45.0%
GCAGCAGACCCATTTGATAT+CGG - chr4.2:13399903-13399922 MS.gene08830:CDS 45.0%
GGAATGACAGAAACTACCTC+TGG + chr4.2:13396311-13396330 None:intergenic 45.0%
GGCTATACCTTTAGCACAGT+TGG + chr4.2:13398675-13398694 None:intergenic 45.0%
GGTGCTAGATGGTTCCTAAA+AGG - chr4.2:13397078-13397097 MS.gene08830:intron 45.0%
GTCATCCGATGAAAATCGGA+TGG - chr4.2:13396625-13396644 MS.gene08830:intron 45.0%
TATGCACAGCGTCATGAAGA+TGG - chr4.2:13398373-13398392 MS.gene08830:CDS 45.0%
TCTCACGCTAAATCATCCGA+TGG + chr4.2:13397780-13397799 None:intergenic 45.0%
TCTTTCCACGCAACTTCCAA+AGG - chr4.2:13397459-13397478 MS.gene08830:CDS 45.0%
TGCAGCCATAAGATCAGCTT+TGG - chr4.2:13399406-13399425 MS.gene08830:intron 45.0%
TGGCTATCTACAAAGCTTGC+TGG - chr4.2:13397286-13397305 MS.gene08830:intron 45.0%
TGTGTCTATGACGCCTATGA+TGG + chr4.2:13396438-13396457 None:intergenic 45.0%
TTGAAGCTGTGTGAGTTCCA+TGG + chr4.2:13397182-13397201 None:intergenic 45.0%
! AAAAGTGCAGCCTCTCAAAG+CGG - chr4.2:13399837-13399856 MS.gene08830:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr4.2:13399716-13399735 MS.gene08830:CDS 45.0%
! ACAGTTGGAGACAAGGTACT+AGG + chr4.2:13398660-13398679 None:intergenic 45.0%
! ACTCTTCTGGGAATGACTGA+TGG - chr4.2:13399216-13399235 MS.gene08830:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr4.2:13399715-13399734 MS.gene08830:CDS 45.0%
! CTCTTTTTACTTCCCTTGGG+TGG + chr4.2:13399290-13399309 None:intergenic 45.0%
! GAAAGAAAAGCACAATCGGC+CGG - chr4.2:13398803-13398822 MS.gene08830:CDS 45.0%
! GGAGGCCTTATATCAGAAGA+AGG - chr4.2:13399867-13399886 MS.gene08830:intron 45.0%
! GGCTATCTACAAAGCTTGCT+GGG - chr4.2:13397287-13397306 MS.gene08830:intron 45.0%
! GTTTAGGTGAGTTGGGTCTT+AGG + chr4.2:13399677-13399696 None:intergenic 45.0%
! TGATACCTTTGGAAGTTGCG+TGG + chr4.2:13397467-13397486 None:intergenic 45.0%
! TTAGGTGAGTTGGGTCTTAG+GGG + chr4.2:13399675-13399694 None:intergenic 45.0%
!! CAGTTTTTGAGGAGGGATGA+TGG + chr4.2:13396385-13396404 None:intergenic 45.0%
!! CCATGGTGCTGTATTCGAAA+CGG + chr4.2:13397532-13397551 None:intergenic 45.0%
!! CTTGCTTCTGGTTTAGCAAG+AGG - chr4.2:13397243-13397262 MS.gene08830:intron 45.0%
!! GGATTAGTCGGTTCTTGGAT+CGG + chr4.2:13398013-13398032 None:intergenic 45.0%
ACATCGCTCTCTGAGCCTTA+AGG - chr4.2:13399630-13399649 MS.gene08830:intron 50.0%
ACCAGAAGCAAGGCCTCTAT+AGG + chr4.2:13397235-13397254 None:intergenic 50.0%
ACCGTGCTAAACCAGAAGCA+AGG + chr4.2:13398044-13398063 None:intergenic 50.0%
ACTAAGTGGGGTCGGTTACA+TGG - chr4.2:13399728-13399747 MS.gene08830:CDS 50.0%
ATGTAACCGACCCCACTTAG+TGG + chr4.2:13399729-13399748 None:intergenic 50.0%
ATGTCTTGTCCTCATGTGGC+AGG - chr4.2:13399341-13399360 MS.gene08830:intron 50.0%
CAACGCGACACGATAGCAAT+TGG - chr4.2:13397435-13397454 MS.gene08830:CDS 50.0%
CAGGGACAGTCCATTGACAA+TGG - chr4.2:13397699-13397718 MS.gene08830:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr4.2:13399717-13399736 None:intergenic 50.0%
CCGTTTCGAATACAGCACCA+TGG - chr4.2:13397529-13397548 MS.gene08830:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr4.2:13399720-13399739 MS.gene08830:CDS 50.0%
GCAGACCCATTTGATATCGG+GGG - chr4.2:13399906-13399925 MS.gene08830:CDS 50.0%
GCATCAGTACAGTGTCCAAC+AGG + chr4.2:13397318-13397337 None:intergenic 50.0%
GCTAGAGATGCTATTGGCCA+TGG - chr4.2:13397162-13397181 MS.gene08830:intron 50.0%
GGAAAACTCAGCCTTGCAGT+TGG + chr4.2:13398579-13398598 None:intergenic 50.0%
GGAAGCCTAACATGGACAGA+TGG - chr4.2:13400329-13400348 MS.gene08830:CDS 50.0%
GTAAAGGAAGCTGGTGGAGT+TGG - chr4.2:13398343-13398362 MS.gene08830:CDS 50.0%
GTCCTCCCCCGATATCAAAT+GGG + chr4.2:13399914-13399933 None:intergenic 50.0%
GTGGAAGGTTTCCAACTGCA+AGG - chr4.2:13398565-13398584 MS.gene08830:CDS 50.0%
TCCTATAGAGGCCTTGCTTC+TGG - chr4.2:13398030-13398049 MS.gene08830:intron 50.0%
TCTCAAAGCGGAACTGATGG+AGG - chr4.2:13399849-13399868 MS.gene08830:intron 50.0%
TGCAGCCAAAATGTCCACAC+CGG + chr4.2:13399264-13399283 None:intergenic 50.0%
TGTAACCGACCCCACTTAGT+GGG + chr4.2:13399728-13399747 None:intergenic 50.0%
TGTCCTCCCCCGATATCAAA+TGG + chr4.2:13399915-13399934 None:intergenic 50.0%
TTGCGGCCACTACAATCGAT+AGG - chr4.2:13397562-13397581 MS.gene08830:intron 50.0%
TTGGCTGCATTTCCACCCAA+GGG - chr4.2:13399275-13399294 MS.gene08830:intron 50.0%
TTTGGCTGCATTTCCACCCA+AGG - chr4.2:13399274-13399293 MS.gene08830:intron 50.0%
! AGGTGACCAAGTTGGGTGTT+TGG + chr4.2:13399387-13399406 None:intergenic 50.0%
! AGTCATTCCCAGAAGAGTGC+AGG + chr4.2:13399214-13399233 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr4.2:13399714-13399733 MS.gene08830:CDS 50.0%
! TCCATCAGTTCCGCTTTGAG+AGG + chr4.2:13399850-13399869 None:intergenic 50.0%
!! AGGAGCACCTTTAGCTCACT+TGG - chr4.2:13397266-13397285 MS.gene08830:intron 50.0%
!! GCCTTGCTTCTGGTTTAGCA+CGG - chr4.2:13397241-13397260 MS.gene08830:intron 50.0%
!! GCTTCTGGTTTAGCAAGAGG+AGG - chr4.2:13397246-13397265 MS.gene08830:intron 50.0%
!! TGGGTCTGCTGCCTTATTTG+TGG + chr4.2:13399895-13399914 None:intergenic 50.0%
!! TTGCTTCTGGTTTAGCACGG+TGG - chr4.2:13398043-13398062 MS.gene08830:intron 50.0%
ATGGCTGCAGGTGACCAAGT+TGG + chr4.2:13399395-13399414 None:intergenic 55.0%
CACACAGCTTCAACAGCAGC+TGG - chr4.2:13397189-13397208 MS.gene08830:intron 55.0%
CCAGGGTCAGACAAGCCTTA+AGG + chr4.2:13399648-13399667 None:intergenic 55.0%
CCTTAAGGCTTGTCTGACCC+TGG - chr4.2:13399645-13399664 MS.gene08830:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr4.2:13399722-13399741 None:intergenic 55.0%
GACCCATTTGATATCGGGGG+AGG - chr4.2:13399909-13399928 MS.gene08830:CDS 55.0%
GCAGCCAAAATGTCCACACC+GGG + chr4.2:13399263-13399282 None:intergenic 55.0%
GCCGCAACTGTAATGAGCCA+TGG + chr4.2:13397549-13397568 None:intergenic 55.0%
GCCTCTCAAAGCGGAACTGA+TGG - chr4.2:13399846-13399865 MS.gene08830:intron 55.0%
GCGCATTGCACGTGATCCAT+CGG - chr4.2:13397761-13397780 MS.gene08830:CDS 55.0%
GCTGCTATTCCTGCCACATG+AGG + chr4.2:13399353-13399372 None:intergenic 55.0%
TGGATCACGTGCAATGCGCT+CGG + chr4.2:13397760-13397779 None:intergenic 55.0%
TGGCTGCAGGTGACCAAGTT+GGG + chr4.2:13399394-13399413 None:intergenic 55.0%
! AGCACCCGGTGTGGACATTT+TGG - chr4.2:13399256-13399275 MS.gene08830:intron 55.0%
GTCAGCAAATCGGCGTCGTC+CGG - chr4.2:13396528-13396547 MS.gene08830:intron 60.0%
TAGCCGGACATAGCAGCACC+CGG - chr4.2:13399242-13399261 MS.gene08830:intron 60.0%
TGATATCGGGGGAGGACACG+TGG - chr4.2:13399917-13399936 MS.gene08830:CDS 60.0%
TGGGTCTTAGGGGCTCACCA+GGG + chr4.2:13399665-13399684 None:intergenic 60.0%
TTGGGTCTTAGGGGCTCACC+AGG + chr4.2:13399666-13399685 None:intergenic 60.0%
! GCTTGCTGGGACGTTCCTGT+TGG - chr4.2:13397300-13397319 MS.gene08830:intron 60.0%
!! ACACCGGGTGCTGCTATGTC+CGG + chr4.2:13399248-13399267 None:intergenic 60.0%
GGACATAGCAGCACCCGGTG+TGG - chr4.2:13399247-13399266 MS.gene08830:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 13395712 13400406 13395712 ID=MS.gene08830
chr4.2 mRNA 13395712 13400406 13395712 ID=MS.gene08830.t1;Parent=MS.gene08830
chr4.2 exon 13400281 13400406 13400281 ID=MS.gene08830.t1.exon1;Parent=MS.gene08830.t1
chr4.2 CDS 13400281 13400406 13400281 ID=cds.MS.gene08830.t1;Parent=MS.gene08830.t1
chr4.2 exon 13400080 13400171 13400080 ID=MS.gene08830.t1.exon2;Parent=MS.gene08830.t1
chr4.2 CDS 13400080 13400171 13400080 ID=cds.MS.gene08830.t1;Parent=MS.gene08830.t1
chr4.2 exon 13399901 13399998 13399901 ID=MS.gene08830.t1.exon3;Parent=MS.gene08830.t1
chr4.2 CDS 13399901 13399998 13399901 ID=cds.MS.gene08830.t1;Parent=MS.gene08830.t1
chr4.2 exon 13399660 13399815 13399660 ID=MS.gene08830.t1.exon4;Parent=MS.gene08830.t1
chr4.2 CDS 13399660 13399815 13399660 ID=cds.MS.gene08830.t1;Parent=MS.gene08830.t1
chr4.2 exon 13398489 13399162 13398489 ID=MS.gene08830.t1.exon5;Parent=MS.gene08830.t1
chr4.2 CDS 13398489 13399162 13398489 ID=cds.MS.gene08830.t1;Parent=MS.gene08830.t1
chr4.2 exon 13398325 13398416 13398325 ID=MS.gene08830.t1.exon6;Parent=MS.gene08830.t1
chr4.2 CDS 13398325 13398416 13398325 ID=cds.MS.gene08830.t1;Parent=MS.gene08830.t1
chr4.2 exon 13397639 13397881 13397639 ID=MS.gene08830.t1.exon7;Parent=MS.gene08830.t1
chr4.2 CDS 13397639 13397881 13397639 ID=cds.MS.gene08830.t1;Parent=MS.gene08830.t1
chr4.2 exon 13397432 13397546 13397432 ID=MS.gene08830.t1.exon8;Parent=MS.gene08830.t1
chr4.2 CDS 13397432 13397546 13397432 ID=cds.MS.gene08830.t1;Parent=MS.gene08830.t1
chr4.2 exon 13396681 13396873 13396681 ID=MS.gene08830.t1.exon9;Parent=MS.gene08830.t1
chr4.2 CDS 13396681 13396873 13396681 ID=cds.MS.gene08830.t1;Parent=MS.gene08830.t1
chr4.2 exon 13395712 13396271 13395712 ID=MS.gene08830.t1.exon10;Parent=MS.gene08830.t1
chr4.2 CDS 13395712 13396271 13395712 ID=cds.MS.gene08830.t1;Parent=MS.gene08830.t1
Gene Sequence

>MS.gene08830

ATGATGGAAACTAATTCGGGAAACAAGAGATGTGCTAGAAAGGTTCAATTGCTTGTAACTTCAGCTCTTCTTTTACTGCAAAGCTTTCTGATCATCCCCGAGATATTTGCAGAAGAATCAAGCTCTGTGAGTCCAACTTTAGTTTGTAGTAATTGTATTCATTACACATGTCAATAAATGTGAATAATATTTCTTGTTATTTTAGCACAATAATTTATTAAATGCATGTTCCTAGGTGCATATTGTATACATGGGAGAAAAGATATATCATAATCCAGAAACTGCTAAAAAGTATCACCACAAAATGTTATCTTCACTCTTAGGAAGGTATGGCTTGTAATGATCTTCACATATTATTTTCCTAATAATTATCATTACATTAAGATGCATTTAATTTTTGTTCTGCAGCAAAGAAGATGCAAAGAATTCACTTCTTTATAGCTATAAACATGGATTTTCAGGGTTTGCTGCTAGAATGACAAAGTCCCAAGCAGAAGATATAGCAAGTATGAATATGGTCCTTACCATGATTAAGATTAGTTTTTAAACCTATTTTTAGCACTTTTTTAAAGCTATATATATACAATGTAGAGTTTCCAGAGGTAGTTTCTGTCATTCCAAATGGCATTCACAAACTTCACACAACTAGAAGTTGGGACTTCATTGGGGTCCATCATCCCTCCTCAAAAACTGTTTTCACTGAAAGCAACTTAGGTCAAGGAACCATCATAGGCGTCATAGACACAGGTACTAATCCTCTTACAAATATCCAACCAAAGCATTTGAAAATGAAAACAGATCTCATGCATTCATGCAGTCAGCAAATCGGCGTCGTCCGGTTAAGATCAGAAATTTCAGATTTCAAGCTAGTTTTTAGATATTTGTAAACACGATTTACGAACTTAAAATCTGAGTCATCCGATGAAAATCGGATGGTGCTAATTGGAAAGTGCAGATATCCAACCAAACACTAGAAAATGAAAATGGATTTCTTGCAATACGGGATCAGATGCATTCATGCTGTCAGCAATTTGGTACCGTCCAATTAAGATCAAACAACTCAGATTTCGAACAAGTTTTTAATATTTTTAAATGCGATTTACCGAGGTTAAAATATGAGTTGTCCAGTGAAAATTGGATGGTGAAGATCTGCTAATTGCATGAATGTACGAGATTCCTGACTACACAAAATCCCTAGAAAACGGCGTTGTAATGTAACCAATGATAAACTTGATTTCTTGAAGGCATTTGGCCAGAGTCTGCAAGTTTCAATGATGAAGCAATGGGAAAAATTCCATCCAAGTGGAAAGGAGTTTGTCAAGTTGGAGAAAAATTTAACTCCACAAACTGTAACAAGAAGATCATTGGTGCTAGATGGTTCCTAAAAGGAATAACTGATCACACTAAGAACCTCATCCTTGGAAACAATGACACTACAGAATATCTCTCAGCTAGAGATGCTATTGGCCATGGAACTCACACAGCTTCAACAGCAGCTGGATATTATGTAGAAAATGCAAATTATAGAGGCCTTGCTTCTGGTTTAGCAAGAGGAGGAGCACCTTTAGCTCACTTGGCTATCTACAAAGCTTGCTGGGACGTTCCTGTTGGACACTGTACTGATGCTGATATCCTCAAAGCATTTGACATGGCTATACACGATGGTGTAGATGTCTTAACTGTTTCTCTTGGCATTGGCATCCCTTTGTTTTCGTATGTTGATCAACGCGACACGATAGCAATTGGTTCTTTCCACGCAACTTCCAAAGGTATCACAGTTGTTTCTTCAGCTGGAAATTCTGGTCCTATTTCTCAAACCGTTTCGAATACAGCACCATGGCTCATTACAGTTGCGGCCACTACAATCGATAGGACTTTTCCAACAGCCATTACACTTGGAAGTAACCTTACTTTGTGGGTATGCTACAACTACTTCTGTATCAAATTGGTGAAATGTGATATCAACTAACAGTTGATTGATATAATGCAGGGACAGTCCATTGACAATGGAAAACACTCTCTTGGATTTGTCGGGCTCACATACTCCGAGCGCATTGCACGTGATCCATCGGATGATTTAGCGTGAGACCTTTCTTCCTTCTTCATACACACAAACACGGGTGTGAATCTGCTTACTCTAGCAATAACTCTTTTCATATATACCCTATTTGAATTCTTCTCTAGAATAGATTAAATCTAAAAATAAAATAAAAACATAAAATTTAAAAATTATTCGATACTTCATCAAATGATGCATGACCGTTGACATAATAATATTTTTTGTTGAAAACTCGGTATCCGATCCAAGAACCGACTAATCCTATAGAGGCCTTGCTTCTGGTTTAGCACGGTGGCTATACAATATTCAACGGTGGTGTTGATGAAATTCATTATTTATACAGAACTATGAAATGAAGTAACTCTGGCAAATTTTACTCTTGGAATAAGTAGGTTCATACCTAAATATATATATAAAATCTCACTTGTGTATATTTTGTATGAACTGTCTATGTCTTCCTTTGAAGTAAGGATTGTCAGTCTGGAAGTCTGAATGAAACAATGGCAGCAGGAAAAATTGTTCTATGCTTTTCAGTATCAGATCAACAAGATATCGTTTCTGCAGCACTTACAGTAAAGGAAGCTGGTGGAGTTGGACTAATATATGCACAGCGTCATGAAGATGGACTCAATGAATGTGGTATACTTCCGTGCATTAAGGTAGATTATGAAGCAGGGACACAACTGTTAACCTATATTAGAAGAGCAAGGTGAGGAAATAAATAATATGCATAGATTGACAAGATTGGCTTCTGAAATATTCATTTGAGCTGAAATTAATATTATTAAGCTCATGTGGAAGGTTTCCAACTGCAAGGCTGAGTTTTCCAAAGACTGTTATAGGAAAATGGATATCTCCAAGAGTTGCATCTTTCTCATCTAGAGGACCTAGTACCTTGTCTCCAACTGTGCTAAAGGTATAGCCCAACCTTAAAATTCTTACTTGTAGGTATGATTTATTCTATTTAACCAGATCATGTTTCTGAAATTTGAGACAAAAAGTAAATAGAGAATTGTTGGCTAGGATTCTTTAGAAAGAAAAGCACAATCGGCCGGCTATTAGTTTAAACAATTGTTTATAACAAATTATAAATTTCGTTACCTTCAACCAAACATAACAAAAAATCTTAGAATTTGGATTAAGTCTAACTCAGGTGGTTCAAGAGTTTTTGCCATATCTGTAGTATTGTAGGATGCCAACAAAATTAAATAAAAGAACAAATATATCTCAAAATAAAATTTAAAATATATGATATCAATATGTTTTCAAGGCACATGCCAGCAGAGAAGCAATATATAACGAGAAATTCGATTTGAGTGAAGGCAGAGAACTAAATAAATGTCTATTTGAGGTGCTATCTTTTAAATTATAGTAAGCAACTTACCATAAAACAAAAATATAATGCTCTTACATGGTTTTCAATTTATGGTGTCATCATAACCTGCACTCTTCTGGGAATGACTGATGGAAATAGCCGGACATAGCAGCACCCGGTGTGGACATTTTGGCTGCATTTCCACCCAAGGGAAGTAAAAAGAGCAGTGGATTCATATTCTTATCTGGAACATCAATGTCTTGTCCTCATGTGGCAGGAATAGCAGCACTCATAAAATCCAAACACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGGTGAGTCAACGAACATCAACATAGTTGTTTGGTTTCTATCCATCCAAATTATCTTCAAATTTCAATTTTACTAGAAGTGACAGAAAGTAATTTTTGTGTTGGTTTAAAAATTTACACTACTTTAATATACTTTCCAAAGTAAAAATAAATAACTTCACTTCAAAATCAATTATCATCTAATCATCTCTAAGTACATCGCTCTCTGAGCCTTAAGGCTTGTCTGACCCTGGTGAGCCCCTAAGACCCAACTCACCTAAACTTTTACAACAACAACAACCAAGCCTTATCCCACTAAGTGGGGTCGGTTACATGGATCACCTAAACTTTTCTTTATAAAATAATATCATCAAATCAGTTTTACATAACCAATAATATCAAAACTAACTAGTCTCAACATTGAAAAGTGCAGCCTCTCAAAGCGGAACTGATGGAGGCCTTATATCAGAAGAAGGTTCCACAAATAAGGCAGCAGACCCATTTGATATCGGGGGAGGACACGTGGATCCTAACAAAGCAATCAATGCAGGACTCATATACAACATTACCACAGAGGATTATATCCAATTCCTATGTTCCATGGGTCATAATACAGCATCTATTAGAAAAGTGACCAAAACCACTACAAGTTGCAACAAACAAAAAAGACGAGCACTGTTGAACCTTAACCTTCCTTCCATATCAATTCCAAACCTGAAGAGTCATACAACAGTAATGAGAACAGTGACAAACGTTGGAAACATAAATGTAGTCTACAAAGCTATAGTGAATAGTCCTTATGGTATAAAAGTGAGAGTTGAACCTCAAATTTTGAACTTCAATTCAGAAATCAAAGTACTTACCTTCAACGTAAGCTTCATTTCAACTCAAAAGTTGCATGGTGATTACAGATTTGGAAGCCTAACATGGACAGATGGCAATCATTTTGTGAGGATACCAATAGCTGTTAGGACCATACAATTTGAATATTAA
Protein sequence

>MS.gene08830.t1

MMETNSGNKRCARKVQLLVTSALLLLQSFLIIPEIFAEESSSVHIVYMGEKIYHNPETAKKYHHKMLSSLLGSKEDAKNSLLYSYKHGFSGFAARMTKSQAEDIAKFPEVVSVIPNGIHKLHTTRSWDFIGVHHPSSKTVFTESNLGQGTIIGVIDTGIWPESASFNDEAMGKIPSKWKGVCQVGEKFNSTNCNKKIIGARWFLKGITDHTKNLILGNNDTTEYLSARDAIGHGTHTASTAAGYYVENANYRGLASGLARGGAPLAHLAIYKACWDVPVGHCTDADILKAFDMAIHDGVDVLTVSLGIGIPLFSYVDQRDTIAIGSFHATSKGITVVSSAGNSGPISQTVSNTAPWLITVAATTIDRTFPTAITLGSNLTLWGQSIDNGKHSLGFVGLTYSERIARDPSDDLAKDCQSGSLNETMAAGKIVLCFSVSDQQDIVSAALTVKEAGGVGLIYAQRHEDGLNECGILPCIKVDYEAGTQLLTYIRRARFPTARLSFPKTVIGKWISPRVASFSSRGPSTLSPTVLKPDIAAPGVDILAAFPPKGSKKSSGFIFLSGTSMSCPHVAGIAALIKSKHPTWSPAAIRSALVTTASQSGTDGGLISEEGSTNKAADPFDIGGGHVDPNKAINAGLIYNITTEDYIQFLCSMGHNTASIRKVTKTTTSCNKQKRRALLNLNLPSISIPNLKSHTTVMRTVTNVGNINVVYKAIVNSPYGIKVRVEPQILNFNSEIKVLTFNVSFISTQKLHGDYRFGSLTWTDGNHFVRIPIAVRTIQFEY