AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08983

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08983.t1 MTR_8g083220 96.096 794 18 2 1 794 1 781 0.0 1564
MS.gene08983.t1 MTR_8g072440 43.484 752 393 12 40 788 31 753 0.0 586
MS.gene08983.t1 MTR_5g025010 42.914 755 396 13 40 788 25 750 0.0 577
MS.gene08983.t1 MTR_5g025010 43.247 733 382 12 61 788 15 718 0.0 568
MS.gene08983.t1 MTR_8g072440 43.767 722 375 11 69 788 19 711 0.0 567
MS.gene08983.t1 MTR_4g053630 41.114 754 412 11 44 790 4 732 0.0 542
MS.gene08983.t1 MTR_8g042710 41.990 774 399 19 37 788 19 764 0.0 540
MS.gene08983.t1 MTR_8g042670 42.452 775 365 20 44 788 35 758 0.0 539
MS.gene08983.t1 MTR_3g082200 40.613 783 402 20 36 790 25 772 3.35e-180 536
MS.gene08983.t1 MTR_7g098630 41.325 755 375 17 61 787 46 760 6.55e-180 538
MS.gene08983.t1 MTR_7g098070 39.974 783 405 22 38 791 19 765 1.97e-177 528
MS.gene08983.t1 MTR_4g134320 39.125 800 420 22 22 791 7 769 5.87e-177 527
MS.gene08983.t1 MTR_4g103400 40.598 803 400 23 24 787 12 776 1.62e-175 524
MS.gene08983.t1 MTR_4g103490 40.458 786 393 23 44 788 33 784 1.92e-173 519
MS.gene08983.t1 MTR_5g096750 41.463 779 376 23 44 788 33 765 3.04e-173 518
MS.gene08983.t1 MTR_4g103430 40.505 753 394 19 57 787 48 768 5.24e-173 518
MS.gene08983.t1 MTR_3g104930 42.559 766 378 18 43 787 37 761 2.17e-172 515
MS.gene08983.t1 MTR_4g103450 40.516 775 398 21 44 788 3 744 1.17e-170 510
MS.gene08983.t1 MTR_4g073540 41.813 739 378 19 78 791 60 771 1.51e-170 511
MS.gene08983.t1 MTR_4g103480 40.233 773 403 20 44 788 46 787 2.21e-170 511
MS.gene08983.t1 MTR_4g095360 39.637 772 394 20 42 787 29 754 5.26e-170 509
MS.gene08983.t1 MTR_3g114420 40.806 794 408 21 23 790 10 767 2.87e-168 505
MS.gene08983.t1 MTR_3g102810 39.822 786 415 18 23 786 4 753 2.34e-167 502
MS.gene08983.t1 MTR_7g075900 41.298 724 376 15 81 787 80 771 1.56e-166 501
MS.gene08983.t1 MTR_3g061110 37.610 795 423 20 22 788 4 753 6.29e-166 498
MS.gene08983.t1 MTR_8g022870 39.490 785 393 19 51 791 33 779 5.06e-165 497
MS.gene08983.t1 MTR_2g018135 39.975 793 399 20 39 787 23 782 1.78e-164 496
MS.gene08983.t1 MTR_0047s0120 40.601 766 402 19 38 786 26 755 6.45e-164 493
MS.gene08983.t1 MTR_1g018510 39.550 756 399 13 56 786 2 724 2.46e-163 491
MS.gene08983.t1 MTR_4g071560 49.043 575 225 9 48 603 1 526 4.34e-163 484
MS.gene08983.t1 MTR_4g053635 40.909 704 381 14 96 792 2 677 8.05e-163 488
MS.gene08983.t1 MTR_4g103495 40.766 731 376 18 38 741 24 724 1.19e-162 490
MS.gene08983.t1 MTR_4g053630 41.324 680 367 11 118 790 1 655 4.09e-162 485
MS.gene08983.t1 MTR_2g018125 39.723 793 399 20 40 787 25 783 4.32e-162 489
MS.gene08983.t1 MTR_2g042130 38.882 805 413 21 21 786 7 771 1.30e-161 488
MS.gene08983.t1 MTR_8g006680 39.398 764 385 21 38 790 29 725 1.04e-160 484
MS.gene08983.t1 MTR_8g005300 39.398 764 385 21 38 790 29 725 1.04e-160 484
MS.gene08983.t1 MTR_8g005640 39.398 764 385 21 38 790 29 725 1.04e-160 484
MS.gene08983.t1 MTR_1g102350 37.687 804 439 19 14 787 5 776 1.12e-160 486
MS.gene08983.t1 MTR_7g081750 37.983 803 404 20 44 788 32 798 1.46e-160 486
MS.gene08983.t1 MTR_5g016120 39.556 766 411 16 38 785 27 758 8.17e-160 483
MS.gene08983.t1 MTR_8g042670 43.492 653 314 17 152 788 21 634 6.55e-158 474
MS.gene08983.t1 MTR_3g082200 40.896 670 348 16 137 790 12 649 9.12e-157 471
MS.gene08983.t1 MTR_3g010080 37.595 790 411 18 23 792 9 736 2.10e-155 471
MS.gene08983.t1 MTR_6g055570 38.462 767 395 18 37 790 30 732 2.37e-155 471
MS.gene08983.t1 MTR_5g011190 39.228 803 422 17 1 787 1 753 3.56e-155 471
MS.gene08983.t1 MTR_8g021130 40.052 764 384 21 58 788 53 775 7.82e-155 471
MS.gene08983.t1 MTR_7g081580 39.086 788 409 26 40 788 29 784 8.68e-155 471
MS.gene08983.t1 MTR_1g048110 38.542 768 394 17 37 790 30 733 1.02e-154 469
MS.gene08983.t1 MTR_7g034380 38.731 741 376 14 63 788 15 692 4.91e-154 466
MS.gene08983.t1 MTR_7g075890 37.775 773 394 19 39 787 188 897 4.96e-154 472
MS.gene08983.t1 MTR_1g006990 38.292 773 397 20 37 792 30 739 8.71e-154 467
MS.gene08983.t1 MTR_7g081420 38.596 798 400 24 40 788 29 785 2.66e-153 467
MS.gene08983.t1 MTR_8g033150 38.411 768 397 15 39 787 41 751 3.58e-153 466
MS.gene08983.t1 MTR_3g464790 41.130 761 378 20 38 787 30 731 6.50e-153 464
MS.gene08983.t1 MTR_8g033150 38.532 763 393 15 44 787 19 724 9.50e-153 464
MS.gene08983.t1 MTR_5g011370 38.854 803 425 17 1 787 21 773 5.12e-152 463
MS.gene08983.t1 MTR_3g082200 41.294 649 333 17 158 790 18 634 1.80e-151 457
MS.gene08983.t1 MTR_7g481600 38.119 787 418 23 40 788 29 784 3.03e-150 460
MS.gene08983.t1 MTR_4g125180 38.668 781 421 19 23 786 11 750 3.26e-150 458
MS.gene08983.t1 MTR_5g011310 38.308 804 428 19 1 787 1 753 2.01e-149 456
MS.gene08983.t1 MTR_6g055410 37.370 768 384 19 37 790 30 714 2.81e-149 454
MS.gene08983.t1 MTR_7g081500 37.363 819 420 25 18 788 10 783 5.52e-149 456
MS.gene08983.t1 MTR_1g079120 36.671 799 431 23 23 792 13 765 1.30e-148 454
MS.gene08983.t1 MTR_4g102400 38.562 765 405 20 40 787 36 752 4.25e-148 452
MS.gene08983.t1 MTR_1g007030 36.849 768 411 17 38 792 31 737 4.81e-148 452
MS.gene08983.t1 MTR_5g011320 39.177 753 403 14 43 787 40 745 4.84e-148 452
MS.gene08983.t1 MTR_8g079900 37.549 767 404 16 39 787 32 741 3.67e-147 450
MS.gene08983.t1 MTR_5g085690 37.944 817 418 25 24 787 8 788 3.03e-146 449
MS.gene08983.t1 MTR_7g079310 36.205 801 431 22 22 787 8 763 3.07e-146 448
MS.gene08983.t1 MTR_4g103495 41.654 653 328 18 158 788 3 624 3.49e-146 443
MS.gene08983.t1 MTR_5g011260 37.080 774 421 19 27 787 31 751 5.08e-146 447
MS.gene08983.t1 MTR_7g104200 38.521 771 395 21 44 792 33 746 2.89e-145 445
MS.gene08983.t1 MTR_5g011340 38.430 739 401 13 57 787 58 750 4.25e-144 442
MS.gene08983.t1 MTR_7g081380 37.670 807 417 23 40 788 29 807 9.30e-144 443
MS.gene08983.t1 MTR_8g005710 37.219 755 380 20 62 790 15 701 1.61e-143 439
MS.gene08983.t1 MTR_8g024380 39.224 747 370 21 67 787 70 758 3.75e-143 440
MS.gene08983.t1 MTR_1g078110 37.418 759 401 18 62 794 50 760 1.40e-142 438
MS.gene08983.t1 MTR_7g079300 36.815 785 412 24 41 787 27 765 1.95e-142 438
MS.gene08983.t1 MTR_3g114410 44.881 586 264 14 37 597 30 581 3.37e-142 431
MS.gene08983.t1 MTR_8g024390 39.702 738 375 21 81 793 71 763 5.35e-142 437
MS.gene08983.t1 MTR_5g055920 40.000 685 345 19 126 788 27 667 5.83e-142 434
MS.gene08983.t1 MTR_5g011270 37.644 781 418 19 27 794 31 755 2.06e-141 435
MS.gene08983.t1 MTR_8g024420 39.024 738 378 22 81 793 37 727 2.82e-141 434
MS.gene08983.t1 MTR_5g011280 37.516 765 413 19 38 787 41 755 3.67e-140 432
MS.gene08983.t1 MTR_8g042710 43.373 581 297 15 36 597 18 585 5.99e-136 418
MS.gene08983.t1 MTR_8g079900 38.451 697 355 15 109 787 3 643 2.83e-135 416
MS.gene08983.t1 MTR_7g118080 36.579 801 428 22 25 793 9 761 1.22e-132 412
MS.gene08983.t1 MTR_2g044630 35.686 765 389 20 38 788 31 706 1.73e-132 410
MS.gene08983.t1 MTR_8g024370 36.476 806 422 22 24 792 9 761 1.61e-130 407
MS.gene08983.t1 MTR_2g049200 37.787 741 383 21 81 793 71 761 1.19e-126 397
MS.gene08983.t1 MTR_6g075370 34.707 752 361 17 44 776 35 675 9.46e-121 379
MS.gene08983.t1 MTR_2g042640 36.981 722 314 23 37 746 15 607 2.72e-119 373
MS.gene08983.t1 MTR_3g452290 35.756 688 315 18 110 790 4 571 1.81e-111 351
MS.gene08983.t1 MTR_3g451220 35.756 688 315 18 110 790 4 571 1.81e-111 351
MS.gene08983.t1 MTR_2g042650 32.338 770 353 22 38 792 31 647 5.49e-98 318
MS.gene08983.t1 MTR_4g127480 33.462 780 432 29 60 788 71 814 1.53e-92 308
MS.gene08983.t1 MTR_2g037850 33.081 792 440 30 50 785 54 811 4.25e-90 301
MS.gene08983.t1 MTR_4g132620 32.579 795 458 28 38 787 53 814 1.30e-86 292
MS.gene08983.t1 MTR_2g046740 30.937 779 454 25 61 787 92 838 1.05e-83 285
MS.gene08983.t1 MTR_8g027260 42.547 369 175 9 17 381 8 343 5.08e-75 257
MS.gene08983.t1 MTR_8g027260 38.050 318 156 7 488 790 363 654 9.19e-55 201
MS.gene08983.t1 MTR_8g089230 30.708 749 455 24 82 787 118 845 1.73e-73 257
MS.gene08983.t1 MTR_5g081100 36.585 492 240 14 44 532 4 426 6.47e-73 244
MS.gene08983.t1 MTR_7g079295 42.017 357 170 12 41 379 27 364 9.79e-69 236
MS.gene08983.t1 MTR_7g079295 35.099 151 87 5 644 787 363 509 1.92e-14 77.4
MS.gene08983.t1 MTR_3g114160 37.121 396 175 9 78 464 4 334 1.59e-62 215
MS.gene08983.t1 MTR_5g081280 37.003 327 153 10 44 369 23 297 1.94e-56 196
MS.gene08983.t1 MTR_2g070250 32.603 365 191 9 164 528 97 406 1.69e-44 166
MS.gene08983.t1 MTR_8g092940 44.541 229 98 9 80 307 27 227 5.72e-43 156
MS.gene08983.t1 MTR_3g114140 38.462 273 136 9 490 748 169 423 1.03e-39 152
MS.gene08983.t1 MTR_3g114140 44.099 161 60 2 226 386 28 158 1.93e-24 107
MS.gene08983.t1 MTR_2g070260 36.574 216 113 4 565 777 1 195 1.23e-37 140
MS.gene08983.t1 MTR_4g053665 32.584 267 123 6 531 792 1 215 7.96e-32 124
MS.gene08983.t1 MTR_5g079315 81.081 74 14 0 293 366 1 74 6.63e-31 116
MS.gene08983.t1 MTR_4g126230 32.707 266 144 8 462 716 7 248 2.70e-30 120
MS.gene08983.t1 MTR_5g044060 43.919 148 64 4 500 640 1 136 6.82e-25 102
MS.gene08983.t1 MTR_5g081130 36.310 168 96 5 626 787 10 172 1.67e-21 93.6
MS.gene08983.t1 MTR_7g081660 34.118 170 107 4 621 788 387 553 4.12e-20 95.5
MS.gene08983.t1 MTR_1g050640 42.857 84 45 1 40 123 44 124 9.35e-16 75.1
MS.gene08983.t1 MTR_3g114400 33.735 166 87 6 629 787 13 162 1.44e-15 75.5
MS.gene08983.t1 MTR_8g027660 28.729 181 97 6 619 793 98 252 9.60e-13 69.3
MS.gene08983.t1 MTR_5g011300 36.111 108 55 2 565 672 1 94 2.57e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08983.t1 AT1G32960 50.526 760 351 10 37 789 26 767 0.0 743
MS.gene08983.t1 AT4G10550 49.227 776 367 11 23 789 11 768 0.0 733
MS.gene08983.t1 AT4G10550 49.351 770 363 11 29 789 33 784 0.0 731
MS.gene08983.t1 AT4G10540 48.880 759 365 9 37 789 24 765 0.0 730
MS.gene08983.t1 AT4G10520 48.765 769 359 11 24 789 10 746 0.0 727
MS.gene08983.t1 AT1G32940 50.395 760 352 10 37 789 23 764 0.0 722
MS.gene08983.t1 AT1G32950 49.231 780 364 11 20 789 6 763 0.0 713
MS.gene08983.t1 AT4G10510 48.172 793 381 14 10 794 2 772 0.0 712
MS.gene08983.t1 AT4G10510 48.945 758 362 11 43 794 22 760 0.0 711
MS.gene08983.t1 AT4G10550 49.589 730 344 10 66 789 1 712 0.0 699
MS.gene08983.t1 AT4G10550 49.589 730 344 10 66 789 1 712 0.0 699
MS.gene08983.t1 AT4G10530 46.718 777 368 13 19 789 1 737 0.0 692
MS.gene08983.t1 AT4G21650 49.611 772 324 13 38 789 36 762 0.0 691
MS.gene08983.t1 AT1G32940 50.479 731 337 10 66 789 1 713 0.0 690
MS.gene08983.t1 AT1G32940 50.479 731 337 10 66 789 1 713 0.0 690
MS.gene08983.t1 AT4G10510 48.844 735 351 11 66 794 1 716 0.0 683
MS.gene08983.t1 AT1G32950 50.136 734 334 11 66 789 1 712 0.0 681
MS.gene08983.t1 AT4G21630 47.744 798 356 15 9 789 2 755 0.0 670
MS.gene08983.t1 AT5G11940 44.987 778 395 6 19 794 13 759 0.0 664
MS.gene08983.t1 AT4G10510 48.333 720 347 11 81 794 1 701 0.0 664
MS.gene08983.t1 AT1G66220 45.769 780 377 13 17 789 6 746 0.0 658
MS.gene08983.t1 AT4G21640 45.420 797 341 13 12 789 8 729 0.0 634
MS.gene08983.t1 AT1G66210 44.605 760 383 11 37 794 34 757 0.0 624
MS.gene08983.t1 AT4G21323 43.519 756 378 16 43 789 80 795 0.0 584
MS.gene08983.t1 AT1G32970 43.041 776 385 14 19 789 1 724 0.0 579
MS.gene08983.t1 AT1G32940 52.465 568 258 8 37 597 23 585 0.0 566
MS.gene08983.t1 AT2G04160 41.463 779 403 18 34 788 22 771 0.0 548
MS.gene08983.t1 AT1G04110 42.323 775 374 20 51 787 31 770 0.0 541
MS.gene08983.t1 AT4G21326 41.851 724 384 7 66 788 1 688 7.21e-180 532
MS.gene08983.t1 AT1G20160 40.788 787 406 20 24 789 16 763 8.70e-177 527
MS.gene08983.t1 AT4G26330 42.605 737 373 19 73 787 13 721 2.50e-176 525
MS.gene08983.t1 AT1G20160 42.350 732 368 18 79 789 26 724 8.21e-176 523
MS.gene08983.t1 AT4G34980 42.818 738 371 19 73 787 49 758 4.67e-174 520
MS.gene08983.t1 AT5G59810 39.796 784 409 18 30 788 30 775 3.87e-173 518
MS.gene08983.t1 AT4G26330 41.811 751 373 20 73 787 13 735 2.13e-172 515
MS.gene08983.t1 AT5G67360 40.205 781 407 20 29 787 12 754 2.38e-171 513
MS.gene08983.t1 AT1G20150 40.513 780 386 20 44 787 33 770 3.02e-168 505
MS.gene08983.t1 AT5G45650 40.250 800 394 22 39 787 22 788 1.97e-167 504
MS.gene08983.t1 AT5G45650 40.250 800 394 22 39 787 22 788 1.97e-167 504
MS.gene08983.t1 AT3G14067 40.879 751 386 18 62 788 52 768 2.49e-166 500
MS.gene08983.t1 AT3G14240 40.000 750 375 18 80 791 61 773 8.47e-163 491
MS.gene08983.t1 AT2G05920 40.346 751 385 18 63 792 46 754 5.48e-160 483
MS.gene08983.t1 AT5G51750 39.973 733 391 16 74 787 72 774 8.50e-157 476
MS.gene08983.t1 AT5G59090 38.351 764 390 16 38 787 27 723 1.26e-151 461
MS.gene08983.t1 AT5G59090 38.613 764 393 17 38 787 27 728 6.41e-151 459
MS.gene08983.t1 AT4G00230 38.874 764 401 16 38 787 32 743 2.48e-149 456
MS.gene08983.t1 AT5G59090 38.613 764 391 18 38 787 27 726 2.88e-149 455
MS.gene08983.t1 AT5G59130 37.056 788 404 22 23 792 17 730 1.69e-148 453
MS.gene08983.t1 AT5G59130 37.056 788 400 23 23 792 17 726 6.38e-147 449
MS.gene08983.t1 AT5G59120 38.281 768 398 18 39 792 27 732 1.23e-146 448
MS.gene08983.t1 AT5G59130 37.433 748 379 20 63 792 15 691 2.17e-145 444
MS.gene08983.t1 AT3G46850 38.961 770 387 25 38 787 28 734 1.14e-144 443
MS.gene08983.t1 AT5G59130 37.136 789 392 23 23 792 17 720 1.32e-144 442
MS.gene08983.t1 AT5G59190 37.852 745 382 17 62 791 14 692 2.09e-144 441
MS.gene08983.t1 AT1G01900 39.862 725 382 20 83 787 81 771 6.86e-144 442
MS.gene08983.t1 AT5G03620 37.743 771 402 20 44 785 35 756 1.43e-143 441
MS.gene08983.t1 AT5G58840 37.212 782 387 21 25 789 14 708 2.08e-143 439
MS.gene08983.t1 AT3G46840 38.362 769 392 22 38 787 29 734 1.72e-142 437
MS.gene08983.t1 AT5G59100 38.189 762 396 21 43 787 34 737 4.46e-141 434
MS.gene08983.t1 AT5G58830 36.662 791 397 20 13 787 3 705 9.40e-141 432
MS.gene08983.t1 AT5G58820 38.262 771 363 24 39 789 25 702 2.50e-135 417
MS.gene08983.t1 AT4G15040 37.268 754 385 21 51 789 7 687 1.55e-134 415
MS.gene08983.t1 AT4G15040 37.268 754 385 21 51 789 7 687 1.55e-134 415
MS.gene08983.t1 AT5G45640 37.268 754 382 24 90 790 39 754 3.78e-127 398
MS.gene08983.t1 AT5G67090 35.504 783 410 19 19 776 3 715 2.03e-125 393
MS.gene08983.t1 AT5G03620 41.270 567 295 12 44 597 35 576 1.61e-124 385
MS.gene08983.t1 AT4G00230 42.234 573 293 11 38 602 32 574 1.72e-123 383
MS.gene08983.t1 AT5G58840 38.954 593 286 17 25 606 14 541 2.29e-115 360
MS.gene08983.t1 AT1G20160 41.078 538 284 13 24 552 16 529 7.72e-114 357
MS.gene08983.t1 AT2G19170 32.984 764 445 24 64 785 70 808 9.93e-96 317
MS.gene08983.t1 AT2G19170 32.984 764 445 24 64 785 70 808 9.93e-96 317
MS.gene08983.t1 AT4G30020 33.247 776 428 25 64 785 70 809 3.55e-90 301
MS.gene08983.t1 AT4G30020 33.247 776 428 25 64 785 70 809 3.55e-90 301
MS.gene08983.t1 AT4G30020 33.247 776 428 25 64 785 70 809 3.55e-90 301
MS.gene08983.t1 AT4G30020 33.247 776 428 25 64 785 70 809 3.55e-90 301
MS.gene08983.t1 AT1G30600 32.778 781 437 25 61 787 80 826 3.63e-88 296
MS.gene08983.t1 AT2G39850 30.996 813 441 32 36 791 20 769 7.88e-88 294
MS.gene08983.t1 AT5G58840 36.914 512 254 16 25 532 14 460 2.03e-85 280
MS.gene08983.t1 AT1G62340 32.661 793 433 29 60 790 79 832 3.91e-85 288
MS.gene08983.t1 AT5G44530 30.631 777 454 26 63 787 90 833 2.98e-80 275
MS.gene08983.t1 AT4G20430 30.373 777 458 27 63 787 103 848 1.23e-79 274
MS.gene08983.t1 AT4G20430 30.373 777 458 27 63 787 103 848 1.23e-79 274
MS.gene08983.t1 AT4G20430 30.819 769 441 28 63 787 103 824 1.23e-78 271
MS.gene08983.t1 AT5G44530 29.676 802 454 27 63 787 90 858 3.81e-75 261
MS.gene08983.t1 AT1G32980 45.771 201 96 2 561 761 3 190 3.83e-50 174
MS.gene08983.t1 AT5G44530 31.765 510 285 18 82 546 106 597 7.83e-49 183
MS.gene08983.t1 AT5G59110 33.962 159 99 2 635 787 8 166 7.20e-22 94.0
MS.gene08983.t1 AT1G71950 43.902 82 43 1 41 122 47 125 1.82e-15 74.3

Find 174 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTTCAGCTGGAAATTC+TGG 0.217907 4.4:-14965502 MS.gene08983:CDS
CAAAGACTGTTATAGGAAAA+TGG 0.220891 4.4:-14964396 MS.gene08983:CDS
TGGAACCTTCTTCTGATATA+AGG 0.236585 4.4:+14963100 None:intergenic
AGCACCCGGTGTGGACATTT+TGG 0.276373 4.4:-14963738 MS.gene08983:CDS
TTCGAAACGGTTTGAGAAAT+AGG 0.281095 4.4:+14965478 None:intergenic
TCACCTTGCTCTTCTAATAT+AGG 0.283071 4.4:+14964533 None:intergenic
CTTCAGGTTTGGAATTGATA+TGG 0.287368 4.4:+14962861 None:intergenic
AATTATAGAGGCCTTGCTTC+TGG 0.298733 4.4:-14965763 MS.gene08983:CDS
AGAAGAAGGTTCCACAAATA+AGG 0.303939 4.4:-14963091 MS.gene08983:CDS
AAAATGTTATCTTCACTCTT+AGG 0.305045 4.4:-14966995 MS.gene08983:CDS
TTGCATGGTGATTACAGATT+TGG 0.307057 4.4:-14962664 MS.gene08983:CDS
CTAGAAGTTGGGACTTCATT+GGG 0.311848 4.4:-14966637 MS.gene08983:CDS
CTTGATTTCTTGAAGGCATT+TGG 0.311910 4.4:-14966053 MS.gene08983:intron
CCTGCATTGATTGCTTTGTT+AGG 0.315288 4.4:+14963030 None:intergenic
GTTGCAACTTGTAGTGGTTT+TGG 0.315811 4.4:+14962924 None:intergenic
TTAGATGATGGAAACTAATT+CGG 0.323050 4.4:-14967300 None:intergenic
GATCTTCTTGTTACAGTTTG+TGG 0.325361 4.4:+14965942 None:intergenic
AGTGGATTCATATTCTTATC+TGG 0.334970 4.4:-14963683 MS.gene08983:CDS
TTACTGTTGTATGACTCTTC+AGG 0.345235 4.4:+14962845 None:intergenic
GCTATAGTGAATAGTCCTTA+TGG 0.348636 4.4:-14962778 MS.gene08983:CDS
ATCACAGTTGTTTCTTCAGC+TGG 0.356297 4.4:-14965511 MS.gene08983:CDS
TGTTACCAAAGCTGATCTTA+TGG 0.357629 4.4:+14963583 None:intergenic
CGAACATCAACATAGTTGTT+TGG 0.363989 4.4:-14963547 MS.gene08983:intron
GATTGCCATCTGTCCATGTT+AGG 0.364733 4.4:+14962638 None:intergenic
GGTGCTAGATGGTTCCTAAA+AGG 0.369584 4.4:-14965916 MS.gene08983:CDS
GTTGTATGACTCTTCAGGTT+TGG 0.378921 4.4:+14962850 None:intergenic
TACTTGCTATATCTTCTGCT+TGG 0.382876 4.4:+14966800 None:intergenic
TGGAAATAACCTTACTTTGT+GGG 0.383187 4.4:-14965386 MS.gene08983:intron
TGGTATACTTCCGTGCATTA+AGG 0.383715 4.4:-14964586 MS.gene08983:CDS
ACTAGAAGTTGGGACTTCAT+TGG 0.388420 4.4:-14966638 MS.gene08983:CDS
GACCCATGGAACATAGGAAT+TGG 0.390726 4.4:+14962974 None:intergenic
GGCTATACCTTTAGCACAGT+TGG 0.393179 4.4:+14964322 None:intergenic
TGAAATGAAGCTTACGTTGA+AGG 0.396560 4.4:+14962696 None:intergenic
TGGCTATCTACAAAGCTTGC+TGG 0.398566 4.4:-14965708 MS.gene08983:CDS
GGTTTAATATTCAAATTGTA+TGG 0.400861 4.4:+14962585 None:intergenic
GCAGCAGACCCATTTGATAT+CGG 0.401613 4.4:-14963069 MS.gene08983:CDS
CAAACTCCTTTCCACTTGGA+TGG 0.402536 4.4:+14965988 None:intergenic
GATGTCTTAACTGTTTCTCT+TGG 0.405379 4.4:-14965613 MS.gene08983:CDS
TGAGGATACCAATAGCTGTT+AGG 0.408815 4.4:-14962609 MS.gene08983:CDS
TTAACTGTTTCTCTTGGCAT+TGG 0.414235 4.4:-14965607 MS.gene08983:CDS
ACTTGCTATATCTTCTGCTT+GGG 0.417096 4.4:+14966801 None:intergenic
TGAAGTAAGGATTGTCAGTC+TGG 0.419249 4.4:-14964762 MS.gene08983:intron
GATTCTTCTGCAAATATCTC+GGG 0.427428 4.4:+14967200 None:intergenic
TTGGAAATAACCTTACTTTG+TGG 0.427732 4.4:-14965387 MS.gene08983:CDS
GAATTGAAGTTCAAAATTTG+AGG 0.429380 4.4:+14962736 None:intergenic
TTAGGTCAAGGAACCATCAT+AGG 0.431578 4.4:-14966572 MS.gene08983:CDS
TGTATGGTCCTAACAGCTAT+TGG 0.434313 4.4:+14962601 None:intergenic
TTTCCAAGTGTAATGGCTGT+TGG 0.435517 4.4:+14965403 None:intergenic
AGAAACAACTGTGATACCTT+TGG 0.439366 4.4:+14965519 None:intergenic
AACACTCTCTTGGATTTGTC+GGG 0.440791 4.4:-14965270 MS.gene08983:CDS
AGGTGACCAAGTTGGGTGTT+TGG 0.442891 4.4:+14963610 None:intergenic
AAACACTCTCTTGGATTTGT+CGG 0.443935 4.4:-14965271 MS.gene08983:CDS
CAGCAGACCCATTTGATATC+GGG 0.446942 4.4:-14963068 MS.gene08983:CDS
TAGATGATGGAAACTAATTC+GGG 0.450579 4.4:-14967299 MS.gene08983:CDS
TATCCAATTCCTATGTTCCA+TGG 0.450910 4.4:-14962977 MS.gene08983:CDS
GACAATGGAAAACACTCTCT+TGG 0.450936 4.4:-14965280 MS.gene08983:CDS
CTTGTCTCCAACTGTGCTAA+AGG 0.451379 4.4:-14964329 MS.gene08983:intron
AGAAGATCATTGGTGCTAGA+TGG 0.451764 4.4:-14965927 MS.gene08983:CDS
GATGAGAAAGATGCAACTCT+TGG 0.452575 4.4:+14964367 None:intergenic
TGCAGCCATAAGATCAGCTT+TGG 0.453854 4.4:-14963588 MS.gene08983:CDS
TGAAGTTTGTGAATGCCATT+TGG 0.459168 4.4:+14966665 None:intergenic
AGATCAGCTTTGGTAACAAC+AGG 0.460215 4.4:-14963578 MS.gene08983:CDS
CTGTAGTGTCATTGTTTCCA+AGG 0.462626 4.4:+14965866 None:intergenic
GCATCAGTACAGTGTCCAAC+AGG 0.464038 4.4:+14965679 None:intergenic
AAGGTTATTTCCAAGTGTAA+TGG 0.464304 4.4:+14965396 None:intergenic
ATTAAGGTAGATTATGAAGC+AGG 0.465394 4.4:-14964570 MS.gene08983:CDS
TTGATATGGAAGGAAGGTTA+AGG 0.465571 4.4:+14962875 None:intergenic
AACTGTAACAAGAAGATCAT+TGG 0.465970 4.4:-14965937 MS.gene08983:CDS
CAACGCGACACGATAGCAAT+TGG 0.470243 4.4:-14965559 MS.gene08983:CDS
GTAAAGGAAGCTGGTGGAGT+TGG 0.470952 4.4:-14964651 MS.gene08983:CDS
GCCTCTCAAAGCGGAACTGA+TGG 0.471189 4.4:-14963126 MS.gene08983:CDS
CTAGGTGCATATTGTATACA+TGG 0.473758 4.4:-14967065 MS.gene08983:intron
TGGCTGCAGGTGACCAAGTT+GGG 0.475861 4.4:+14963603 None:intergenic
TCATTGAAACTTGCAGACTC+TGG 0.477549 4.4:+14966030 None:intergenic
GTAGTTTCTGTCATTCCAAA+TGG 0.480001 4.4:-14966680 MS.gene08983:CDS
TGTAGCATACCCACAAAGTA+AGG 0.480458 4.4:+14965377 None:intergenic
TGATTCTTCTGCAAATATCT+CGG 0.481072 4.4:+14967199 None:intergenic
CACACTAAGAACCTCATCCT+TGG 0.483752 4.4:-14965883 MS.gene08983:CDS
TGGAAAGGAGTTTGTCAAGT+TGG 0.485654 4.4:-14965979 MS.gene08983:CDS
GTAGAAAATGCAAATTATAG+AGG 0.487178 4.4:-14965775 MS.gene08983:CDS
CTCTCAGCTAGAGATGCTAT+TGG 0.487608 4.4:-14965838 MS.gene08983:CDS
TGTCATTGTTTCCAAGGATG+AGG 0.488136 4.4:+14965872 None:intergenic
ACTTCACACAACTAGAAGTT+GGG 0.489273 4.4:-14966648 MS.gene08983:CDS
TATGCACAGCGTCATGAAGA+TGG 0.492726 4.4:-14964621 MS.gene08983:CDS
TTGACAAACTCCTTTCCACT+TGG 0.494530 4.4:+14965984 None:intergenic
CACACAGCTTCAACAGCAGC+TGG 0.497918 4.4:-14965805 MS.gene08983:CDS
AACTTCACACAACTAGAAGT+TGG 0.498851 4.4:-14966649 MS.gene08983:CDS
TTCTGCAGCACTTACAGTAA+AGG 0.500122 4.4:-14964667 MS.gene08983:CDS
TAAAATCCAAACACCCAACT+TGG 0.501966 4.4:-14963616 MS.gene08983:CDS
TAGCCATGTCAAATGCTTTG+AGG 0.503512 4.4:+14965650 None:intergenic
ACACCGGGTGCTGCTATGTC+CGG 0.508908 4.4:+14963749 None:intergenic
GGCTATCTACAAAGCTTGCT+GGG 0.512176 4.4:-14965707 MS.gene08983:CDS
AAAGCTGATCTTATGGCTGC+AGG 0.512788 4.4:+14963590 None:intergenic
AGGAGCACCTTTAGCTCACT+TGG 0.515626 4.4:-14965728 MS.gene08983:CDS
GATCAACATACGAAAACAAA+GGG 0.515737 4.4:+14965581 None:intergenic
ATGTCTTGTCCTCATGTGGC+AGG 0.515904 4.4:-14963653 MS.gene08983:CDS
TGGGTCTGCTGCCTTATTTG+TGG 0.516001 4.4:+14963080 None:intergenic
AAACAAGAGATGTGCTAGAA+AGG 0.518017 4.4:-14967276 MS.gene08983:CDS
TTTCCAACAGCCATTACACT+TGG 0.522045 4.4:-14965406 MS.gene08983:CDS
ATCCAATTCCTATGTTCCAT+GGG 0.525074 4.4:-14962976 MS.gene08983:CDS
CCATGGTGCTGTATTCGAAA+CGG 0.533211 4.4:+14965465 None:intergenic
AGTTTCAATGATGAAGCAAT+GGG 0.533726 4.4:-14966018 MS.gene08983:CDS
TAGATAGCCAAGTGAGCTAA+AGG 0.534407 4.4:+14965721 None:intergenic
ATTTCAACTCAAAAGTTGCA+TGG 0.536725 4.4:-14962679 MS.gene08983:CDS
CTGAATGAAACAATGGCAGC+AGG 0.538323 4.4:-14964735 MS.gene08983:CDS
GCTTGCTGGGACGTTCCTGT+TGG 0.538433 4.4:-14965694 MS.gene08983:CDS
CTTCTTTATAGCTATAAACA+TGG 0.540098 4.4:-14966856 MS.gene08983:CDS
GCTAGAGATGCTATTGGCCA+TGG 0.541370 4.4:-14965832 MS.gene08983:CDS
GGAAAACTCAGCCTTGCAGT+TGG 0.542209 4.4:+14964418 None:intergenic
TATTATGACCCATGGAACAT+AGG 0.542775 4.4:+14962968 None:intergenic
TTGTTTGTTGCAACTTGTAG+TGG 0.543136 4.4:+14962918 None:intergenic
CTTTAGCACAGTTGGAGACA+AGG 0.546000 4.4:+14964330 None:intergenic
TTGGAATTGATATGGAAGGA+AGG 0.546129 4.4:+14962869 None:intergenic
TCCATCAGTTCCGCTTTGAG+AGG 0.546581 4.4:+14963125 None:intergenic
TGGATCACGTGCAATGCGCT+CGG 0.546600 4.4:+14965237 None:intergenic
CTTGCTTCTGGTTTAGCAAG+AGG 0.547357 4.4:-14965751 MS.gene08983:CDS
ATGGCTGCAGGTGACCAAGT+TGG 0.555589 4.4:+14963602 None:intergenic
TTTGGCTGCATTTCCACCCA+AGG 0.561186 4.4:-14963720 MS.gene08983:CDS
AAGTTTCAATGATGAAGCAA+TGG 0.562500 4.4:-14966019 MS.gene08983:CDS
GCACTTACAGTAAAGGAAGC+TGG 0.562837 4.4:-14964660 MS.gene08983:CDS
GGAATGACAGAAACTACCTC+TGG 0.565610 4.4:+14966686 None:intergenic
TGTGTCTATGACGCCTATGA+TGG 0.567504 4.4:+14966559 None:intergenic
TCTTTCGACGCAACTTCCAA+AGG 0.567533 4.4:-14965535 MS.gene08983:CDS
TGTTATCTTCACTCTTAGGA+AGG 0.567791 4.4:-14966991 MS.gene08983:intron
AGGTTTGGAATTGATATGGA+AGG 0.568145 4.4:+14962865 None:intergenic
TTGAAGCTGTGTGAGTTCCA+TGG 0.569128 4.4:+14965815 None:intergenic
GCTTCTGGTTTAGCAAGAGG+AGG 0.571874 4.4:-14965748 MS.gene08983:CDS
ACTGAAAGCAACTTAGGTCA+AGG 0.574792 4.4:-14966584 MS.gene08983:CDS
ACAGTTGGAGACAAGGTACT+AGG 0.581400 4.4:+14964337 None:intergenic
GGAGGCCTTATATCAGAAGA+AGG 0.582543 4.4:-14963105 MS.gene08983:CDS
CCTAACAAAGCAATCAATGC+AGG 0.582803 4.4:-14963030 MS.gene08983:CDS
GTTGCATCTTTCTCATCTAG+AGG 0.585537 4.4:-14964361 MS.gene08983:CDS
GCGCATTGCACGTGATCCAT+CGG 0.586568 4.4:-14965233 MS.gene08983:CDS
AGCAGACCCATTTGATATCG+GGG 0.587889 4.4:-14963067 MS.gene08983:CDS
AGATGCTGTATTATGACCCA+TGG 0.590460 4.4:+14962960 None:intergenic
TCTCAAAGCGGAACTGATGG+AGG 0.593016 4.4:-14963123 MS.gene08983:CDS
ATCAATGTCTTGTCCTCATG+TGG 0.603786 4.4:-14963657 MS.gene08983:CDS
AAAATTCCATCCAAGTGGAA+AGG 0.604125 4.4:-14965994 MS.gene08983:CDS
TGCAGCCAAAATGTCCACAC+CGG 0.604840 4.4:+14963733 None:intergenic
ACCATGGCTCATTACAGTTG+CGG 0.605785 4.4:-14965449 MS.gene08983:CDS
GGAAGCCTAACATGGACAGA+TGG 0.610473 4.4:-14962643 MS.gene08983:CDS
ACAGATTTGGAAGCCTAACA+TGG 0.611247 4.4:-14962651 MS.gene08983:CDS
TTGGCTGCATTTCCACCCAA+GGG 0.612405 4.4:-14963719 MS.gene08983:CDS
CAGGGACAGTCCATTGACAA+TGG 0.614731 4.4:-14965295 MS.gene08983:CDS
GTGGAAGGTTTCCAACTGCA+AGG 0.614861 4.4:-14964429 MS.gene08983:intron
TGATCAACATACGAAAACAA+AGG 0.622316 4.4:+14965580 None:intergenic
CTCTTGCTAAACCAGAAGCA+AGG 0.626020 4.4:+14965752 None:intergenic
ATTCTTCTGCAAATATCTCG+GGG 0.626292 4.4:+14967201 None:intergenic
TAACCTATATTAGAAGAGCA+AGG 0.627264 4.4:-14964536 MS.gene08983:intron
TTAAGGTAGATTATGAAGCA+GGG 0.632035 4.4:-14964569 MS.gene08983:CDS
TTGCGGCCACTACAATCGAT+AGG 0.633312 4.4:-14965432 MS.gene08983:CDS
TCATAATCTACCTTAATGCA+CGG 0.633313 4.4:+14964576 None:intergenic
TAGCCGGACATAGCAGCACC+CGG 0.633717 4.4:-14963752 MS.gene08983:CDS
ATGAGAACAGTGACAAACGT+TGG 0.635977 4.4:-14962823 MS.gene08983:CDS
TAGAAGTTGGGACTTCATTG+GGG 0.636639 4.4:-14966636 MS.gene08983:CDS
GCAGCCAAAATGTCCACACC+GGG 0.637864 4.4:+14963734 None:intergenic
GCTGCTATTCCTGCCACATG+AGG 0.638035 4.4:+14963644 None:intergenic
GGACATAGCAGCACCCGGTG+TGG 0.639225 4.4:-14963747 MS.gene08983:CDS
TGGAAGTCTGAATGAAACAA+TGG 0.642638 4.4:-14964742 MS.gene08983:CDS
AAAAGTCCTATCGATTGTAG+TGG 0.654640 4.4:+14965426 None:intergenic
ATCATAGGCGTCATAGACAC+AGG 0.655865 4.4:-14966557 MS.gene08983:intron
TCTCACGCTAAATCATCCGA+TGG 0.656781 4.4:+14965217 None:intergenic
GCAGACCCATTTGATATCGG+GGG 0.659152 4.4:-14963066 MS.gene08983:CDS
TAGGTGCATATTGTATACAT+GGG 0.667259 4.4:-14967064 MS.gene08983:CDS
GCCGCAACTGTAATGAGCCA+TGG 0.676151 4.4:+14965448 None:intergenic
TATCCTCAAAGCATTTGACA+TGG 0.678885 4.4:-14965653 MS.gene08983:CDS
AAAAGTGCAGCCTCTCAAAG+CGG 0.681198 4.4:-14963135 MS.gene08983:intron
CTTACAGTAAAGGAAGCTGG+TGG 0.703562 4.4:-14964657 MS.gene08983:CDS
GAAGATGGACTCAATGAATG+TGG 0.703870 4.4:-14964606 MS.gene08983:CDS
GAATTGGATATAATCCTCTG+TGG 0.708669 4.4:+14962990 None:intergenic
ATACAATGTAGAGTTTCCAG+AGG 0.721115 4.4:-14966702 MS.gene08983:intron
CATATACAACATTACCACAG+AGG 0.731399 4.4:-14963004 MS.gene08983:CDS
TTTGACATGGCTATACACGA+TGG 0.741019 4.4:-14965640 MS.gene08983:CDS
CCGTTTCGAATACAGCACCA+TGG 0.744343 4.4:-14965465 MS.gene08983:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATTATTATGTCAA+CGG + chr4.4:14964864-14964883 None:intergenic 10.0%
!! TTAATGTAATGATAATTATT+AGG + chr4.4:14962951-14962970 None:intergenic 10.0%
!!! GAGATTTTATATATATATTT+AGG + chr4.4:14965063-14965082 None:intergenic 10.0%
!!! TATTTTATAAAGAAAAGTTT+AGG + chr4.4:14966655-14966674 None:intergenic 10.0%
!! ATTGAAATTTGAAGATAATT+TGG + chr4.4:14966374-14966393 None:intergenic 15.0%
!! TAACAAAAAATCTTAGAATT+TGG - chr4.4:14965775-14965794 MS.gene08983:CDS 15.0%
!! TTAAAAACTAATCTTAATCA+TGG + chr4.4:14963125-14963144 None:intergenic 15.0%
!!! AATATTTTTTGTTGAAAACT+CGG - chr4.4:14964874-14964893 MS.gene08983:intron 15.0%
!!! AGCATTATATTTTTGTTTTA+TGG + chr4.4:14966047-14966066 None:intergenic 15.0%
!!! GAAGTTATTTATTTTTACTT+TGG + chr4.4:14966464-14966483 None:intergenic 15.0%
!!! GTTCTTTTATTTAATTTTGT+TGG + chr4.4:14965859-14965878 None:intergenic 15.0%
!!! TAAAACTGATTTGATATTAT+TGG + chr4.4:14966703-14966722 None:intergenic 15.0%
!!! TTTAAAAAAGTGCTAAAAAT+AGG + chr4.4:14963149-14963168 None:intergenic 15.0%
!! AAAAATATAATGCTCTTACA+TGG - chr4.4:14966053-14966072 MS.gene08983:intron 20.0%
!! AAAAGTAAATAGAGAATTGT+TGG - chr4.4:14965657-14965676 MS.gene08983:CDS 20.0%
!! AAATTTGAAGATAATTTGGA+TGG + chr4.4:14966370-14966389 None:intergenic 20.0%
!! ACTAAATAAATGTCTATTTG+AGG - chr4.4:14965990-14966009 MS.gene08983:CDS 20.0%
!! TTAATATTATTAAGCTCATG+TGG - chr4.4:14965436-14965455 MS.gene08983:CDS 20.0%
!!! ATGATATCAATATGTTTTCA+AGG - chr4.4:14965909-14965928 MS.gene08983:CDS 20.0%
!!! CTAAGATTTTTTGTTATGTT+TGG + chr4.4:14965771-14965790 None:intergenic 20.0%
! AAAATGTTATCTTCACTCTT+AGG - chr4.4:14962889-14962908 MS.gene08983:CDS 25.0%
! AACTAATCTTAATCATGGTA+AGG + chr4.4:14963120-14963139 None:intergenic 25.0%
! ACCTTAAAATTCTTACTTGT+AGG - chr4.4:14965587-14965606 MS.gene08983:CDS 25.0%
! AGATATAGCAAGTATGAATA+TGG - chr4.4:14963093-14963112 MS.gene08983:CDS 25.0%
! CAAACACTAGAAAATGAAAA+TGG - chr4.4:14963566-14963585 MS.gene08983:CDS 25.0%
! CAAGAAATCAAGTTTATCAT+TGG + chr4.4:14963823-14963842 None:intergenic 25.0%
! CAATTACTACAAACTAAAGT+TGG + chr4.4:14962723-14962742 None:intergenic 25.0%
! CAATTGTTTAAACTAATAGC+CGG + chr4.4:14965715-14965734 None:intergenic 25.0%
! CTTCTTTATAGCTATAAACA+TGG - chr4.4:14963028-14963047 MS.gene08983:CDS 25.0%
! GAATTGAAGTTCAAAATTTG+AGG + chr4.4:14967151-14967170 None:intergenic 25.0%
! GTAGAAAATGCAAATTATAG+AGG - chr4.4:14964109-14964128 MS.gene08983:intron 25.0%
! TCTAGAGAAGAATTCAAATA+GGG + chr4.4:14964767-14964786 None:intergenic 25.0%
! TGATAAACTTGATTTCTTGA+AGG - chr4.4:14963824-14963843 MS.gene08983:intron 25.0%
! TTCAATGTTGAGACTATTAT+TGG + chr4.4:14966731-14966750 None:intergenic 25.0%
! TTTATTAAATGCATGTTCCT+AGG - chr4.4:14962801-14962820 MS.gene08983:CDS 25.0%
!! AAAATGGATTTCTTGCAATA+CGG - chr4.4:14963582-14963601 MS.gene08983:CDS 25.0%
!! ACAGAAAGTAATTTTTGTGT+TGG - chr4.4:14966407-14966426 MS.gene08983:intron 25.0%
!! ACCTACAAGTAAGAATTTTA+AGG + chr4.4:14965591-14965610 None:intergenic 25.0%
!! ATTTTACTCTTGGAATAAGT+AGG - chr4.4:14965031-14965050 MS.gene08983:intron 25.0%
!! CTTACATGGTTTTCAATTTA+TGG - chr4.4:14966067-14966086 MS.gene08983:intron 25.0%
!! GTTTTCATTTTCAAATGCTT+TGG + chr4.4:14963378-14963397 None:intergenic 25.0%
!! TTCTAGAGAAGAATTCAAAT+AGG + chr4.4:14964768-14964787 None:intergenic 25.0%
!! TTTAGAAAGAAAAGCACAAT+CGG - chr4.4:14965689-14965708 MS.gene08983:CDS 25.0%
!!! ACAAGTAAGAATTTTAAGGT+TGG + chr4.4:14965587-14965606 None:intergenic 25.0%
!!! CAAGTAAGAATTTTAAGGTT+GGG + chr4.4:14965586-14965605 None:intergenic 25.0%
!!! CATTTTCATTTTCTAGTGTT+TGG + chr4.4:14963568-14963587 None:intergenic 25.0%
!!! TTTTTGTTATGTTTGGTTGA+AGG + chr4.4:14965764-14965783 None:intergenic 25.0%
AACTGTAACAAGAAGATCAT+TGG - chr4.4:14963947-14963966 MS.gene08983:intron 30.0%
AAGTTTCAATGATGAAGCAA+TGG - chr4.4:14963865-14963884 MS.gene08983:intron 30.0%
ACAGTTGATTGATATAATGC+AGG - chr4.4:14964570-14964589 MS.gene08983:CDS 30.0%
ACTATGAAATGAAGTAACTC+TGG - chr4.4:14965005-14965024 MS.gene08983:intron 30.0%
AGTTTCAATGATGAAGCAAT+GGG - chr4.4:14963866-14963885 MS.gene08983:intron 30.0%
ATCCTACAATACTACAGATA+TGG + chr4.4:14965835-14965854 None:intergenic 30.0%
ATTAAGGTAGATTATGAAGC+AGG - chr4.4:14965314-14965333 MS.gene08983:intron 30.0%
ATTTCAACTCAAAAGTTGCA+TGG - chr4.4:14967205-14967224 MS.gene08983:CDS 30.0%
ATTTGGATTAAGTCTAACTC+AGG - chr4.4:14965792-14965811 MS.gene08983:CDS 30.0%
CAAAGACTGTTATAGGAAAA+TGG - chr4.4:14965488-14965507 MS.gene08983:CDS 30.0%
CAAATTTCAGAAACATGATC+TGG + chr4.4:14965632-14965651 None:intergenic 30.0%
CAACTACTTCTGTATCAAAT+TGG - chr4.4:14964528-14964547 MS.gene08983:intron 30.0%
CAGTTGATTGATATAATGCA+GGG - chr4.4:14964571-14964590 MS.gene08983:CDS 30.0%
CTGAAATTTCTGATCTTAAC+CGG + chr4.4:14963440-14963459 None:intergenic 30.0%
CTGAGTTGTTTGATCTTAAT+TGG + chr4.4:14963646-14963665 None:intergenic 30.0%
GATCAACATACGAAAACAAA+GGG + chr4.4:14964306-14964325 None:intergenic 30.0%
GTTGTTTGATCTTAATTGGA+CGG + chr4.4:14963642-14963661 None:intergenic 30.0%
TAACCTATATTAGAAGAGCA+AGG - chr4.4:14965348-14965367 MS.gene08983:intron 30.0%
TACACAAAATCCCTAGAAAA+CGG - chr4.4:14963784-14963803 MS.gene08983:intron 30.0%
TAGGTGCATATTGTATACAT+GGG - chr4.4:14962820-14962839 MS.gene08983:CDS 30.0%
TATGCATAGATTGACAAGAT+TGG - chr4.4:14965386-14965405 MS.gene08983:intron 30.0%
TATTATTAAGCTCATGTGGA+AGG - chr4.4:14965440-14965459 MS.gene08983:CDS 30.0%
TCATAATCTACCTTAATGCA+CGG + chr4.4:14965311-14965330 None:intergenic 30.0%
TGATCAACATACGAAAACAA+AGG + chr4.4:14964307-14964326 None:intergenic 30.0%
TGATTCTTCTGCAAATATCT+CGG + chr4.4:14962688-14962707 None:intergenic 30.0%
TGGAAATAACCTTACTTTGT+GGG - chr4.4:14964498-14964517 MS.gene08983:intron 30.0%
TTAAGGTAGATTATGAAGCA+GGG - chr4.4:14965315-14965334 MS.gene08983:intron 30.0%
TTGGAAATAACCTTACTTTG+TGG - chr4.4:14964497-14964516 MS.gene08983:intron 30.0%
TTTGGTTGGATATTTGTAAG+AGG + chr4.4:14963360-14963379 None:intergenic 30.0%
! AAATGGATTTCTTGCAATAC+GGG - chr4.4:14963583-14963602 MS.gene08983:CDS 30.0%
! AAGGTTATTTCCAAGTGTAA+TGG + chr4.4:14964491-14964510 None:intergenic 30.0%
! AGAGTGAAGATAACATTTTG+TGG + chr4.4:14962888-14962907 None:intergenic 30.0%
! AGCTATAAACATGGATTTTC+AGG - chr4.4:14963037-14963056 MS.gene08983:CDS 30.0%
! AGTGGATTCATATTCTTATC+TGG - chr4.4:14966201-14966220 MS.gene08983:intron 30.0%
! AGTTTTCCAAAGACTGTTAT+AGG - chr4.4:14965481-14965500 MS.gene08983:CDS 30.0%
! CATTTTCCTATAACAGTCTT+TGG + chr4.4:14965490-14965509 None:intergenic 30.0%
! GCTATAAACATGGATTTTCA+GGG - chr4.4:14963038-14963057 MS.gene08983:CDS 30.0%
! TAAATAGAGAATTGTTGGCT+AGG - chr4.4:14965662-14965681 MS.gene08983:CDS 30.0%
! TCATTTTCAAATGCTTTGGT+TGG + chr4.4:14963374-14963393 None:intergenic 30.0%
! TGTGATCAGTTATTCCTTTT+AGG + chr4.4:14963985-14964004 None:intergenic 30.0%
! TTCAGTGAAAACAGTTTTTG+AGG + chr4.4:14963286-14963305 None:intergenic 30.0%
! TTTTTAAATGCGATTTACCG+AGG - chr4.4:14963687-14963706 MS.gene08983:CDS 30.0%
!! ACTCTCACTTTTATACCATA+AGG + chr4.4:14967124-14967143 None:intergenic 30.0%
!! TGATACTTTTTAGCAGTTTC+TGG + chr4.4:14962865-14962884 None:intergenic 30.0%
!! TTCATTTTCTAGTGTTTGGT+TGG + chr4.4:14963564-14963583 None:intergenic 30.0%
!!! GACAACTCATATTTTAACCT+CGG + chr4.4:14963707-14963726 None:intergenic 30.0%
AAAATTCCATCCAAGTGGAA+AGG - chr4.4:14963890-14963909 MS.gene08983:intron 35.0%
AAACAAGAGATGTGCTAGAA+AGG - chr4.4:14962608-14962627 MS.gene08983:CDS 35.0%
AAACACTCTCTTGGATTTGT+CGG - chr4.4:14964613-14964632 MS.gene08983:CDS 35.0%
AACTTCACACAACTAGAAGT+TGG - chr4.4:14963235-14963254 MS.gene08983:intron 35.0%
ACTGACAATCCTTACTTCAA+AGG + chr4.4:14965121-14965140 None:intergenic 35.0%
ACTTCACACAACTAGAAGTT+GGG - chr4.4:14963236-14963255 MS.gene08983:intron 35.0%
AGAAACAACTGTGATACCTT+TGG + chr4.4:14964368-14964387 None:intergenic 35.0%
AGAAGAAGGTTCCACAAATA+AGG - chr4.4:14966793-14966812 MS.gene08983:intron 35.0%
ATACAATGTAGAGTTTCCAG+AGG - chr4.4:14963182-14963201 MS.gene08983:intron 35.0%
ATCCAATTCCTATGTTCCAT+GGG - chr4.4:14966908-14966927 MS.gene08983:intron 35.0%
ATGAGTTGTCCAGTGAAAAT+TGG - chr4.4:14963717-14963736 MS.gene08983:CDS 35.0%
ATTCTTCTGCAAATATCTCG+GGG + chr4.4:14962686-14962705 None:intergenic 35.0%
CATATACAACATTACCACAG+AGG - chr4.4:14966880-14966899 MS.gene08983:CDS 35.0%
CATGTATACAATATGCACCT+AGG + chr4.4:14962821-14962840 None:intergenic 35.0%
CGAACATCAACATAGTTGTT+TGG - chr4.4:14966337-14966356 MS.gene08983:intron 35.0%
CTAGGTGCATATTGTATACA+TGG - chr4.4:14962819-14962838 MS.gene08983:CDS 35.0%
CTTCTTCATACACACAAACA+CGG - chr4.4:14964699-14964718 MS.gene08983:CDS 35.0%
GAATTGGATATAATCCTCTG+TGG + chr4.4:14966897-14966916 None:intergenic 35.0%
GATCTTCTTGTTACAGTTTG+TGG + chr4.4:14963945-14963964 None:intergenic 35.0%
GATTCTTCTGCAAATATCTC+GGG + chr4.4:14962687-14962706 None:intergenic 35.0%
GCTATAGTGAATAGTCCTTA+TGG - chr4.4:14967106-14967125 MS.gene08983:intron 35.0%
GGTGGCTATACAATATTCAA+CGG - chr4.4:14964951-14964970 MS.gene08983:intron 35.0%
GTAGTTTCTGTCATTCCAAA+TGG - chr4.4:14963204-14963223 MS.gene08983:intron 35.0%
GTTATATATTGCTTCTCTGC+TGG + chr4.4:14965941-14965960 None:intergenic 35.0%
TAAAATCCAAACACCCAACT+TGG - chr4.4:14966268-14966287 MS.gene08983:intron 35.0%
TATATTAGAAGAGCAAGGTG+AGG - chr4.4:14965353-14965372 MS.gene08983:intron 35.0%
TATCCAATTCCTATGTTCCA+TGG - chr4.4:14966907-14966926 MS.gene08983:intron 35.0%
TATTATGACCCATGGAACAT+AGG + chr4.4:14966919-14966938 None:intergenic 35.0%
TCACCTTGCTCTTCTAATAT+AGG + chr4.4:14965354-14965373 None:intergenic 35.0%
TGAAATGAAGCTTACGTTGA+AGG + chr4.4:14967191-14967210 None:intergenic 35.0%
TGAAGTTTGTGAATGCCATT+TGG + chr4.4:14963222-14963241 None:intergenic 35.0%
TGCCATATCTGTAGTATTGT+AGG - chr4.4:14965830-14965849 MS.gene08983:CDS 35.0%
TGGAACCTTCTTCTGATATA+AGG + chr4.4:14966787-14966806 None:intergenic 35.0%
TGGAAGTCTGAATGAAACAA+TGG - chr4.4:14965142-14965161 MS.gene08983:intron 35.0%
TGTGTATGAAGAAGGAAGAA+AGG + chr4.4:14964693-14964712 None:intergenic 35.0%
TGTTACCAAAGCTGATCTTA+TGG + chr4.4:14966304-14966323 None:intergenic 35.0%
TGTTATCTTCACTCTTAGGA+AGG - chr4.4:14962893-14962912 MS.gene08983:CDS 35.0%
TTACTGTTGTATGACTCTTC+AGG + chr4.4:14967042-14967061 None:intergenic 35.0%
TTCGAAACGGTTTGAGAAAT+AGG + chr4.4:14964409-14964428 None:intergenic 35.0%
TTCTTCATACACACAAACAC+GGG - chr4.4:14964700-14964719 MS.gene08983:CDS 35.0%
TTGATATGGAAGGAAGGTTA+AGG + chr4.4:14967012-14967031 None:intergenic 35.0%
TTGCATGGTGATTACAGATT+TGG - chr4.4:14967220-14967239 MS.gene08983:CDS 35.0%
TTGGAATTGATATGGAAGGA+AGG + chr4.4:14967018-14967037 None:intergenic 35.0%
! AAAAGTCCTATCGATTGTAG+TGG + chr4.4:14964461-14964480 None:intergenic 35.0%
! ACTCTGGCAAATTTTACTCT+TGG - chr4.4:14965021-14965040 MS.gene08983:intron 35.0%
! AGGTTTGGAATTGATATGGA+AGG + chr4.4:14967022-14967041 None:intergenic 35.0%
! CTTCAGGTTTGGAATTGATA+TGG + chr4.4:14967026-14967045 None:intergenic 35.0%
! GAGAAATTCGATTTGAGTGA+AGG - chr4.4:14965961-14965980 MS.gene08983:CDS 35.0%
! GATGTCTTAACTGTTTCTCT+TGG - chr4.4:14964271-14964290 MS.gene08983:intron 35.0%
! GTTTTCACTGAAAGCAACTT+AGG - chr4.4:14963294-14963313 MS.gene08983:intron 35.0%
! TATCCTCAAAGCATTTGACA+TGG - chr4.4:14964231-14964250 MS.gene08983:intron 35.0%
! TTAACTGTTTCTCTTGGCAT+TGG - chr4.4:14964277-14964296 MS.gene08983:intron 35.0%
! TTGTTTGTTGCAACTTGTAG+TGG + chr4.4:14966969-14966988 None:intergenic 35.0%
!! ACTTGCTATATCTTCTGCTT+GGG + chr4.4:14963086-14963105 None:intergenic 35.0%
!! AGAGTGTTTTCCATTGTCAA+TGG + chr4.4:14964602-14964621 None:intergenic 35.0%
!! AGTGAAAACAGTTTTTGAGG+AGG + chr4.4:14963283-14963302 None:intergenic 35.0%
!! CTATGTCTTCCTTTGAAGTA+AGG - chr4.4:14965109-14965128 MS.gene08983:intron 35.0%
!! CTTGATTTCTTGAAGGCATT+TGG - chr4.4:14963831-14963850 MS.gene08983:intron 35.0%
!! GTGAAAACAGTTTTTGAGGA+GGG + chr4.4:14963282-14963301 None:intergenic 35.0%
!! TACTTGCTATATCTTCTGCT+TGG + chr4.4:14963087-14963106 None:intergenic 35.0%
AACACTCTCTTGGATTTGTC+GGG - chr4.4:14964614-14964633 MS.gene08983:CDS 40.0%
AAGGGAAGTAAAAAGAGCAG+TGG - chr4.4:14966183-14966202 MS.gene08983:intron 40.0%
AATTATAGAGGCCTTGCTTC+TGG - chr4.4:14964121-14964140 MS.gene08983:intron 40.0%
ACAGATTTGGAAGCCTAACA+TGG - chr4.4:14967233-14967252 MS.gene08983:CDS 40.0%
ACTAGAAGTTGGGACTTCAT+TGG - chr4.4:14963246-14963265 MS.gene08983:intron 40.0%
ACTGAAAGCAACTTAGGTCA+AGG - chr4.4:14963300-14963319 MS.gene08983:intron 40.0%
AGAACCGACTAATCCTATAG+AGG - chr4.4:14964908-14964927 MS.gene08983:intron 40.0%
AGATGCTGTATTATGACCCA+TGG + chr4.4:14966927-14966946 None:intergenic 40.0%
ATCAATGTCTTGTCCTCATG+TGG - chr4.4:14966227-14966246 MS.gene08983:intron 40.0%
ATCATAACCTGCACTCTTCT+GGG - chr4.4:14966094-14966113 MS.gene08983:intron 40.0%
ATGAGAACAGTGACAAACGT+TGG - chr4.4:14967061-14967080 MS.gene08983:CDS 40.0%
CATTCATGCAGTCAGCAAAT+CGG - chr4.4:14963408-14963427 MS.gene08983:intron 40.0%
CATTCATGCTGTCAGCAATT+TGG - chr4.4:14963614-14963633 MS.gene08983:CDS 40.0%
CCTAACAAAGCAATCAATGC+AGG - chr4.4:14966854-14966873 MS.gene08983:CDS 40.0%
CGTGTTTGTGTGTATGAAGA+AGG + chr4.4:14964701-14964720 None:intergenic 40.0%
CTAGAAGTTGGGACTTCATT+GGG - chr4.4:14963247-14963266 MS.gene08983:intron 40.0%
CTGAGTCATCCGATGAAAAT+CGG - chr4.4:14963511-14963530 MS.gene08983:intron 40.0%
GAATGACTGATGGAAATAGC+CGG - chr4.4:14966116-14966135 MS.gene08983:intron 40.0%
GACAATGGAAAACACTCTCT+TGG - chr4.4:14964604-14964623 MS.gene08983:CDS 40.0%
GATGAGAAAGATGCAACTCT+TGG + chr4.4:14965520-14965539 None:intergenic 40.0%
GGCTATACAATATTCAACGG+TGG - chr4.4:14964954-14964973 MS.gene08983:intron 40.0%
GTTGCATCTTTCTCATCTAG+AGG - chr4.4:14965523-14965542 MS.gene08983:CDS 40.0%
GTTGTCCAGTGAAAATTGGA+TGG - chr4.4:14963721-14963740 MS.gene08983:CDS 40.0%
GTTTCTTCAGCTGGAAATTC+TGG - chr4.4:14964382-14964401 MS.gene08983:CDS 40.0%
TAGAAGTTGGGACTTCATTG+GGG - chr4.4:14963248-14963267 MS.gene08983:intron 40.0%
TAGATAGCCAAGTGAGCTAA+AGG + chr4.4:14964166-14964185 None:intergenic 40.0%
TAGCCATGTCAAATGCTTTG+AGG + chr4.4:14964237-14964256 None:intergenic 40.0%
TCATTGAAACTTGCAGACTC+TGG + chr4.4:14963857-14963876 None:intergenic 40.0%
TCTTCACTCTTAGGAAGGTA+TGG - chr4.4:14962898-14962917 MS.gene08983:CDS 40.0%
TGAAGTAAGGATTGTCAGTC+TGG - chr4.4:14965122-14965141 MS.gene08983:intron 40.0%
TGAGGATACCAATAGCTGTT+AGG - chr4.4:14967275-14967294 MS.gene08983:CDS 40.0%
TGGAAAGGAGTTTGTCAAGT+TGG - chr4.4:14963905-14963924 MS.gene08983:intron 40.0%
TGGATTAAGTCTAACTCAGG+TGG - chr4.4:14965795-14965814 MS.gene08983:CDS 40.0%
TGGGAAAAATTCCATCCAAG+TGG - chr4.4:14963885-14963904 MS.gene08983:intron 40.0%
TGGTATACTTCCGTGCATTA+AGG - chr4.4:14965298-14965317 MS.gene08983:intron 40.0%
TGTAGCATACCCACAAAGTA+AGG + chr4.4:14964510-14964529 None:intergenic 40.0%
TGTATGGTCCTAACAGCTAT+TGG + chr4.4:14967286-14967305 None:intergenic 40.0%
TGTCATTGTTTCCAAGGATG+AGG + chr4.4:14964015-14964034 None:intergenic 40.0%
TTAGGTCAAGGAACCATCAT+AGG - chr4.4:14963312-14963331 MS.gene08983:intron 40.0%
TTCTGCAGCACTTACAGTAA+AGG - chr4.4:14965217-14965236 MS.gene08983:intron 40.0%
TTGACAAACTCCTTTCCACT+TGG + chr4.4:14963903-14963922 None:intergenic 40.0%
TTTCCAACAGCCATTACACT+TGG - chr4.4:14964478-14964497 MS.gene08983:intron 40.0%
TTTCCAAGTGTAATGGCTGT+TGG + chr4.4:14964484-14964503 None:intergenic 40.0%
TTTGACATGGCTATACACGA+TGG - chr4.4:14964244-14964263 MS.gene08983:intron 40.0%
! AAGGCCTCTATAGGATTAGT+CGG + chr4.4:14964915-14964934 None:intergenic 40.0%
! ACTGCTCTTTTTACTTCCCT+TGG + chr4.4:14966184-14966203 None:intergenic 40.0%
! AGATCAGCTTTGGTAACAAC+AGG - chr4.4:14966306-14966325 MS.gene08983:intron 40.0%
! CAGATGGCAATCATTTTGTG+AGG - chr4.4:14967257-14967276 MS.gene08983:CDS 40.0%
! CTGCTCTTTTTACTTCCCTT+GGG + chr4.4:14966183-14966202 None:intergenic 40.0%
! CTGTAGTGTCATTGTTTCCA+AGG + chr4.4:14964021-14964040 None:intergenic 40.0%
! CTTCACCATCCAATTTTCAC+TGG + chr4.4:14963729-14963748 None:intergenic 40.0%
! GAAAATCGGATGGTGCTAAT+TGG - chr4.4:14963525-14963544 MS.gene08983:intron 40.0%
! GAAGATGGACTCAATGAATG+TGG - chr4.4:14965278-14965297 MS.gene08983:CDS 40.0%
! GTTGCAACTTGTAGTGGTTT+TGG + chr4.4:14966963-14966982 None:intergenic 40.0%
! GTTGTATGACTCTTCAGGTT+TGG + chr4.4:14967037-14967056 None:intergenic 40.0%
! TAGCACCATCCGATTTTCAT+CGG + chr4.4:14963523-14963542 None:intergenic 40.0%
! TCTAGGGATTTTGTGTAGTC+AGG + chr4.4:14963781-14963800 None:intergenic 40.0%
!! AGAAGATCATTGGTGCTAGA+TGG - chr4.4:14963957-14963976 MS.gene08983:intron 40.0%
!! ATCACAGTTGTTTCTTCAGC+TGG - chr4.4:14964373-14964392 MS.gene08983:CDS 40.0%
!! CCTGCATTGATTGCTTTGTT+AGG + chr4.4:14966857-14966876 None:intergenic 40.0%
!! CTATAGGATTAGTCGGTTCT+TGG + chr4.4:14964908-14964927 None:intergenic 40.0%
AAAATCCCTAGAAAACGGCG+TGG - chr4.4:14963789-14963808 MS.gene08983:intron 45.0%
AAAGCTGATCTTATGGCTGC+AGG + chr4.4:14966297-14966316 None:intergenic 45.0%
ACCATGGCTCATTACAGTTG+CGG - chr4.4:14964435-14964454 MS.gene08983:intron 45.0%
AGCAGACCCATTTGATATCG+GGG - chr4.4:14966817-14966836 MS.gene08983:CDS 45.0%
ATCATAGGCGTCATAGACAC+AGG - chr4.4:14963327-14963346 MS.gene08983:intron 45.0%
CAAACTCCTTTCCACTTGGA+TGG + chr4.4:14963899-14963918 None:intergenic 45.0%
CACACTAAGAACCTCATCCT+TGG - chr4.4:14964001-14964020 MS.gene08983:intron 45.0%
CAGCAGACCCATTTGATATC+GGG - chr4.4:14966816-14966835 MS.gene08983:CDS 45.0%
CATCATAACCTGCACTCTTC+TGG - chr4.4:14966093-14966112 MS.gene08983:intron 45.0%
CTCTCAGCTAGAGATGCTAT+TGG - chr4.4:14964046-14964065 MS.gene08983:intron 45.0%
CTCTTGCTAAACCAGAAGCA+AGG + chr4.4:14964135-14964154 None:intergenic 45.0%
CTGAATGAAACAATGGCAGC+AGG - chr4.4:14965149-14965168 MS.gene08983:intron 45.0%
CTTACAGTAAAGGAAGCTGG+TGG - chr4.4:14965227-14965246 MS.gene08983:CDS 45.0%
CTTGTCTCCAACTGTGCTAA+AGG - chr4.4:14965555-14965574 MS.gene08983:CDS 45.0%
CTTTAGCACAGTTGGAGACA+AGG + chr4.4:14965557-14965576 None:intergenic 45.0%
GACCCATGGAACATAGGAAT+TGG + chr4.4:14966913-14966932 None:intergenic 45.0%
GATTGCCATCTGTCCATGTT+AGG + chr4.4:14967249-14967268 None:intergenic 45.0%
GCACTTACAGTAAAGGAAGC+TGG - chr4.4:14965224-14965243 MS.gene08983:CDS 45.0%
GCAGCAGACCCATTTGATAT+CGG - chr4.4:14966815-14966834 MS.gene08983:CDS 45.0%
GGAATGACAGAAACTACCTC+TGG + chr4.4:14963201-14963220 None:intergenic 45.0%
GGCTATACCTTTAGCACAGT+TGG + chr4.4:14965565-14965584 None:intergenic 45.0%
GGTGCTAGATGGTTCCTAAA+AGG - chr4.4:14963968-14963987 MS.gene08983:intron 45.0%
GTCATCCGATGAAAATCGGA+TGG - chr4.4:14963515-14963534 MS.gene08983:intron 45.0%
TATGCACAGCGTCATGAAGA+TGG - chr4.4:14965263-14965282 MS.gene08983:CDS 45.0%
TCTCACGCTAAATCATCCGA+TGG + chr4.4:14964670-14964689 None:intergenic 45.0%
TCTTTCGACGCAACTTCCAA+AGG - chr4.4:14964349-14964368 MS.gene08983:CDS 45.0%
TGCAGCCATAAGATCAGCTT+TGG - chr4.4:14966296-14966315 MS.gene08983:intron 45.0%
TGGCTATCTACAAAGCTTGC+TGG - chr4.4:14964176-14964195 MS.gene08983:intron 45.0%
TGTGTCTATGACGCCTATGA+TGG + chr4.4:14963328-14963347 None:intergenic 45.0%
TTAGTGCTCTCTGAGCCTTA+AGG - chr4.4:14966527-14966546 MS.gene08983:intron 45.0%
TTGAAGCTGTGTGAGTTCCA+TGG + chr4.4:14964072-14964091 None:intergenic 45.0%
! AAAAGTGCAGCCTCTCAAAG+CGG - chr4.4:14966749-14966768 MS.gene08983:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr4.4:14966613-14966632 MS.gene08983:CDS 45.0%
! ACAGTTGGAGACAAGGTACT+AGG + chr4.4:14965550-14965569 None:intergenic 45.0%
! ACTCTTCTGGGAATGACTGA+TGG - chr4.4:14966106-14966125 MS.gene08983:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr4.4:14966612-14966631 MS.gene08983:CDS 45.0%
! CTCTTTTTACTTCCCTTGGG+TGG + chr4.4:14966180-14966199 None:intergenic 45.0%
! GAAAGAAAAGCACAATCGGC+CGG - chr4.4:14965693-14965712 MS.gene08983:CDS 45.0%
! GGAGGCCTTATATCAGAAGA+AGG - chr4.4:14966779-14966798 MS.gene08983:intron 45.0%
! GGCTATCTACAAAGCTTGCT+GGG - chr4.4:14964177-14964196 MS.gene08983:intron 45.0%
!! ACATTACCACGCCGTTTTCT+AGG + chr4.4:14963798-14963817 None:intergenic 45.0%
!! CAGTTTTTGAGGAGGGATGA+TGG + chr4.4:14963275-14963294 None:intergenic 45.0%
!! CATTACCACGCCGTTTTCTA+GGG + chr4.4:14963797-14963816 None:intergenic 45.0%
!! CCATGGTGCTGTATTCGAAA+CGG + chr4.4:14964422-14964441 None:intergenic 45.0%
!! CTTGCTTCTGGTTTAGCAAG+AGG - chr4.4:14964133-14964152 MS.gene08983:intron 45.0%
!! GGATTAGTCGGTTCTTGGAT+CGG + chr4.4:14964903-14964922 None:intergenic 45.0%
ACCAGAAGCAAGGCCTCTAT+AGG + chr4.4:14964125-14964144 None:intergenic 50.0%
ACCGTGCTAAACCAGAAGCA+AGG + chr4.4:14964934-14964953 None:intergenic 50.0%
ATGTCTTGTCCTCATGTGGC+AGG - chr4.4:14966231-14966250 MS.gene08983:intron 50.0%
CAACGCGACACGATAGCAAT+TGG - chr4.4:14964325-14964344 MS.gene08983:intron 50.0%
CAGGGACAGTCCATTGACAA+TGG - chr4.4:14964589-14964608 MS.gene08983:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr4.4:14966614-14966633 None:intergenic 50.0%
CCGTTTCGAATACAGCACCA+TGG - chr4.4:14964419-14964438 MS.gene08983:CDS 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr4.4:14966617-14966636 MS.gene08983:CDS 50.0%
GCAGACCCATTTGATATCGG+GGG - chr4.4:14966818-14966837 MS.gene08983:CDS 50.0%
GCATCAGTACAGTGTCCAAC+AGG + chr4.4:14964208-14964227 None:intergenic 50.0%
GCTAGAGATGCTATTGGCCA+TGG - chr4.4:14964052-14964071 MS.gene08983:intron 50.0%
GGAAAACTCAGCCTTGCAGT+TGG + chr4.4:14965469-14965488 None:intergenic 50.0%
GGAAGCCTAACATGGACAGA+TGG - chr4.4:14967241-14967260 MS.gene08983:CDS 50.0%
GTAAAGGAAGCTGGTGGAGT+TGG - chr4.4:14965233-14965252 MS.gene08983:CDS 50.0%
GTCCTCCCCCGATATCAAAT+GGG + chr4.4:14966826-14966845 None:intergenic 50.0%
GTGGAAGGTTTCCAACTGCA+AGG - chr4.4:14965455-14965474 MS.gene08983:CDS 50.0%
TCCTATAGAGGCCTTGCTTC+TGG - chr4.4:14964920-14964939 MS.gene08983:intron 50.0%
TCTCAAAGCGGAACTGATGG+AGG - chr4.4:14966761-14966780 MS.gene08983:intron 50.0%
TGCAGCCAAAATGTCCACAC+CGG + chr4.4:14966154-14966173 None:intergenic 50.0%
TGTCCTCCCCCGATATCAAA+TGG + chr4.4:14966827-14966846 None:intergenic 50.0%
TTGCGGCCACTACAATCGAT+AGG - chr4.4:14964452-14964471 MS.gene08983:intron 50.0%
TTGGCTGCATTTCCACCCAA+GGG - chr4.4:14966165-14966184 MS.gene08983:intron 50.0%
TTTGGCTGCATTTCCACCCA+AGG - chr4.4:14966164-14966183 MS.gene08983:intron 50.0%
! AGGTGACCAAGTTGGGTGTT+TGG + chr4.4:14966277-14966296 None:intergenic 50.0%
! AGTCATTCCCAGAAGAGTGC+AGG + chr4.4:14966104-14966123 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr4.4:14966611-14966630 MS.gene08983:CDS 50.0%
! TCCATCAGTTCCGCTTTGAG+AGG + chr4.4:14966762-14966781 None:intergenic 50.0%
!! AGGAGCACCTTTAGCTCACT+TGG - chr4.4:14964156-14964175 MS.gene08983:intron 50.0%
!! GCCTTGCTTCTGGTTTAGCA+CGG - chr4.4:14964131-14964150 MS.gene08983:intron 50.0%
!! GCTTCTGGTTTAGCAAGAGG+AGG - chr4.4:14964136-14964155 MS.gene08983:intron 50.0%
!! TGGGTCTGCTGCCTTATTTG+TGG + chr4.4:14966807-14966826 None:intergenic 50.0%
!! TTGCTTCTGGTTTAGCACGG+TGG - chr4.4:14964933-14964952 MS.gene08983:intron 50.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr4.4:14966625-14966644 MS.gene08983:CDS 55.0%
ATGGCTGCAGGTGACCAAGT+TGG + chr4.4:14966285-14966304 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr4.4:14966626-14966645 None:intergenic 55.0%
CACACAGCTTCAACAGCAGC+TGG - chr4.4:14964079-14964098 MS.gene08983:intron 55.0%
CCAGGGTCAGACAAGCCTTA+AGG + chr4.4:14966545-14966564 None:intergenic 55.0%
CCTTAAGGCTTGTCTGACCC+TGG - chr4.4:14966542-14966561 MS.gene08983:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr4.4:14966619-14966638 None:intergenic 55.0%
GACCCATTTGATATCGGGGG+AGG - chr4.4:14966821-14966840 MS.gene08983:CDS 55.0%
GCAGCCAAAATGTCCACACC+GGG + chr4.4:14966153-14966172 None:intergenic 55.0%
GCCGCAACTGTAATGAGCCA+TGG + chr4.4:14964439-14964458 None:intergenic 55.0%
GCCTCTCAAAGCGGAACTGA+TGG - chr4.4:14966758-14966777 MS.gene08983:intron 55.0%
GCGCATTGCACGTGATCCAT+CGG - chr4.4:14964651-14964670 MS.gene08983:CDS 55.0%
GCTGCTATTCCTGCCACATG+AGG + chr4.4:14966243-14966262 None:intergenic 55.0%
TGGATCACGTGCAATGCGCT+CGG + chr4.4:14964650-14964669 None:intergenic 55.0%
TGGCTGCAGGTGACCAAGTT+GGG + chr4.4:14966284-14966303 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr4.4:14966625-14966644 None:intergenic 55.0%
! AGCACCCGGTGTGGACATTT+TGG - chr4.4:14966146-14966165 MS.gene08983:intron 55.0%
GTCAGCAAATCGGCGTCGTC+CGG - chr4.4:14963418-14963437 MS.gene08983:intron 60.0%
TAGCCGGACATAGCAGCACC+CGG - chr4.4:14966132-14966151 MS.gene08983:intron 60.0%
TGATATCGGGGGAGGACACG+TGG - chr4.4:14966829-14966848 MS.gene08983:CDS 60.0%
TGGGTCTTAGGGGCTCACCA+GGG + chr4.4:14966562-14966581 None:intergenic 60.0%
TTGGGTCTTAGGGGCTCACC+AGG + chr4.4:14966563-14966582 None:intergenic 60.0%
! GCTTGCTGGGACGTTCCTGT+TGG - chr4.4:14964190-14964209 MS.gene08983:intron 60.0%
!! ACACCGGGTGCTGCTATGTC+CGG + chr4.4:14966138-14966157 None:intergenic 60.0%
GGACATAGCAGCACCCGGTG+TGG - chr4.4:14966137-14966156 MS.gene08983:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 14962588 14967318 14962588 ID=MS.gene08983
chr4.4 mRNA 14962588 14967318 14962588 ID=MS.gene08983.t1;Parent=MS.gene08983
chr4.4 exon 14967193 14967318 14967193 ID=MS.gene08983.t1.exon1;Parent=MS.gene08983.t1
chr4.4 CDS 14967193 14967318 14967193 ID=cds.MS.gene08983.t1;Parent=MS.gene08983.t1
chr4.4 exon 14966992 14967083 14966992 ID=MS.gene08983.t1.exon2;Parent=MS.gene08983.t1
chr4.4 CDS 14966992 14967083 14966992 ID=cds.MS.gene08983.t1;Parent=MS.gene08983.t1
chr4.4 exon 14966803 14966900 14966803 ID=MS.gene08983.t1.exon3;Parent=MS.gene08983.t1
chr4.4 CDS 14966803 14966900 14966803 ID=cds.MS.gene08983.t1;Parent=MS.gene08983.t1
chr4.4 exon 14966558 14966713 14966558 ID=MS.gene08983.t1.exon4;Parent=MS.gene08983.t1
chr4.4 CDS 14966558 14966713 14966558 ID=cds.MS.gene08983.t1;Parent=MS.gene08983.t1
chr4.4 exon 14965387 14966060 14965387 ID=MS.gene08983.t1.exon5;Parent=MS.gene08983.t1
chr4.4 CDS 14965387 14966060 14965387 ID=cds.MS.gene08983.t1;Parent=MS.gene08983.t1
chr4.4 exon 14965223 14965314 14965223 ID=MS.gene08983.t1.exon6;Parent=MS.gene08983.t1
chr4.4 CDS 14965223 14965314 14965223 ID=cds.MS.gene08983.t1;Parent=MS.gene08983.t1
chr4.4 exon 14964537 14964779 14964537 ID=MS.gene08983.t1.exon7;Parent=MS.gene08983.t1
chr4.4 CDS 14964537 14964779 14964537 ID=cds.MS.gene08983.t1;Parent=MS.gene08983.t1
chr4.4 exon 14964330 14964444 14964330 ID=MS.gene08983.t1.exon8;Parent=MS.gene08983.t1
chr4.4 CDS 14964330 14964444 14964330 ID=cds.MS.gene08983.t1;Parent=MS.gene08983.t1
chr4.4 exon 14963548 14963771 14963548 ID=MS.gene08983.t1.exon9;Parent=MS.gene08983.t1
chr4.4 CDS 14963548 14963771 14963548 ID=cds.MS.gene08983.t1;Parent=MS.gene08983.t1
chr4.4 exon 14962588 14963152 14962588 ID=MS.gene08983.t1.exon10;Parent=MS.gene08983.t1
chr4.4 CDS 14962588 14963152 14962588 ID=cds.MS.gene08983.t1;Parent=MS.gene08983.t1
Gene Sequence

>MS.gene08983

ATGATGGAAACTAATTCGGGAAACAAGAGATGTGCTAGAAAGGTTCAATTGCTTGTAACTTCAGCTCTTCTTTTACTGCAAAGCTTTCTGATCATCCCCGAGATATTTGCAGAAGAATCAAGCTCTGTGAGTCCAACTTTAGTTTGTAGTAATTGTATTCATTACACATGTCAATAAATGTGAATAATATTTCTTGTTATTTTAGCACAATAATTTATTAAATGCATGTTCCTAGGTGCATATTGTATACATGGGAGAAAAGATATATCATAATCCAGAAACTGCTAAAAAGTATCACCACAAAATGTTATCTTCACTCTTAGGAAGGTATGGCTTGTAATGATCTTCACATATTATTTTCCTAATAATTATCATTACATTAAGATGCATTAAGATGCATTTAATTTTTGTTCTGCAGCAAAGAAGATGCAAAGAATTCACTTCTTTATAGCTATAAACATGGATTTTCAGGGTTTGCTGCTAGAATGACAAAGTCCCAAGCAGAAGATATAGCAAGTATGAATATGGTCCTTACCATGATTAAGATTAGTTTTTAAACCTATTTTTAGCACTTTTTTAAAGCTATATATATATATACAATGTAGAGTTTCCAGAGGTAGTTTCTGTCATTCCAAATGGCATTCACAAACTTCACACAACTAGAAGTTGGGACTTCATTGGGGTCCATCATCCCTCCTCAAAAACTGTTTTCACTGAAAGCAACTTAGGTCAAGGAACCATCATAGGCGTCATAGACACAGGTACTAATCCTCTTACAAATATCCAACCAAAGCATTTGAAAATGAAAACAGATCTCATGCATTCATGCAGTCAGCAAATCGGCGTCGTCCGGTTAAGATCAGAAATTTCAGATTTCAAGCTAGTTTTTAGATATTTGTAAACACGATTTACGAACTTAAAATCTGAGTCATCCGATGAAAATCGGATGGTGCTAATTGGAAAGTGCAGATATCCAACCAAACACTAGAAAATGAAAATGGATTTCTTGCAATACGGGATCAGATGCATTCATGCTGTCAGCAATTTGGTACCGTCCAATTAAGATCAAACAACTCAGATTTCGAACAAGTTTTTAATATTTTTAAATGCGATTTACCGAGGTTAAAATATGAGTTGTCCAGTGAAAATTGGATGGTGAAGATCTGCTAATTGCATGAATGTACGAGATTCCTGACTACACAAAATCCCTAGAAAACGGCGTGGTAATGTAACCAATGATAAACTTGATTTCTTGAAGGCATTTGGCCAGAGTCTGCAAGTTTCAATGATGAAGCAATGGGAAAAATTCCATCCAAGTGGAAAGGAGTTTGTCAAGTTGGAGAAAAATTTAACTCCACAAACTGTAACAAGAAGATCATTGGTGCTAGATGGTTCCTAAAAGGAATAACTGATCACACTAAGAACCTCATCCTTGGAAACAATGACACTACAGAATATCTCTCAGCTAGAGATGCTATTGGCCATGGAACTCACACAGCTTCAACAGCAGCTGGATATTATGTAGAAAATGCAAATTATAGAGGCCTTGCTTCTGGTTTAGCAAGAGGAGGAGCACCTTTAGCTCACTTGGCTATCTACAAAGCTTGCTGGGACGTTCCTGTTGGACACTGTACTGATGCTGATATCCTCAAAGCATTTGACATGGCTATACACGATGGTGTAGATGTCTTAACTGTTTCTCTTGGCATTGGCATCCCTTTGTTTTCGTATGTTGATCAACGCGACACGATAGCAATTGGTTCTTTCGACGCAACTTCCAAAGGTATCACAGTTGTTTCTTCAGCTGGAAATTCTGGTCCTATTTCTCAAACCGTTTCGAATACAGCACCATGGCTCATTACAGTTGCGGCCACTACAATCGATAGGACTTTTCCAACAGCCATTACACTTGGAAATAACCTTACTTTGTGGGTATGCTACAACTACTTCTGTATCAAATTGGTGAAATGTGATATCAACTAACAGTTGATTGATATAATGCAGGGACAGTCCATTGACAATGGAAAACACTCTCTTGGATTTGTCGGGCTCACATACTCCGAGCGCATTGCACGTGATCCATCGGATGATTTAGCGTGAGACCTTTCTTCCTTCTTCATACACACAAACACGGGTGTGAATCTGCTTACTCTAGCAATAACTCTTTTCATATATACCCTATTTGAATTCTTCTCTAGAATAGATTAAATCTAAAAATAAAAAAAAAACATAAAATTTAAAAATTATTCGATACTTCATCAAATGATGCATGACCGTTGACATAATAATATTTTTTGTTGAAAACTCGGTATCCGATCCAAGAACCGACTAATCCTATAGAGGCCTTGCTTCTGGTTTAGCACGGTGGCTATACAATATTCAACGGTGGTGTTGATGAAATTCATTATTTATACAGAACTATGAAATGAAGTAACTCTGGCAAATTTTACTCTTGGAATAAGTAGGTTCATACCTAAATATATATATAAAATCTCACTTGTGTATATTTTGTATGAACTGTCTATGTCTTCCTTTGAAGTAAGGATTGTCAGTCTGGAAGTCTGAATGAAACAATGGCAGCAGGAAAAATTGTTCTATGCTTTTCAGTATCAGATCAACAAGATATTGTTTCTGCAGCACTTACAGTAAAGGAAGCTGGTGGAGTTGGACTAATATATGCACAGCGTCATGAAGATGGACTCAATGAATGTGGTATACTTCCGTGCATTAAGGTAGATTATGAAGCAGGGACACAACTGTTAACCTATATTAGAAGAGCAAGGTGAGGAAATAAATAATATGCATAGATTGACAAGATTGGCTTCTGAAATATTCATTTGAGCTGAAATTAATATTATTAAGCTCATGTGGAAGGTTTCCAACTGCAAGGCTGAGTTTTCCAAAGACTGTTATAGGAAAATGGATATCTCCAAGAGTTGCATCTTTCTCATCTAGAGGACCTAGTACCTTGTCTCCAACTGTGCTAAAGGTATAGCCCAACCTTAAAATTCTTACTTGTAGGTATGATTTATTCTATTTAACCAGATCATGTTTCTGAAATTTGAGACAAAAAGTAAATAGAGAATTGTTGGCTAGGATTCTTTAGAAAGAAAAGCACAATCGGCCGGCTATTAGTTTAAACAATTGTTTATAACAAATTATAAATTTCGTTACCTTCAACCAAACATAACAAAAAATCTTAGAATTTGGATTAAGTCTAACTCAGGTGGTTCAAGAGTTTTTGCCATATCTGTAGTATTGTAGGATGCCAACAAAATTAAATAAAAGAACAAATATATCTCAAAATAAAATTTAAAATATATGATATCAATATGTTTTCAAGGCACATGCCAGCAGAGAAGCAATATATAACGAGAAATTCGATTTGAGTGAAGGCAGAGAACTAAATAAATGTCTATTTGAGGTGCTATCTTTTAAATTATAGTAAGCAACTTACCATAAAACAAAAATATAATGCTCTTACATGGTTTTCAATTTATGGTGTCATCATAACCTGCACTCTTCTGGGAATGACTGATGGAAATAGCCGGACATAGCAGCACCCGGTGTGGACATTTTGGCTGCATTTCCACCCAAGGGAAGTAAAAAGAGCAGTGGATTCATATTCTTATCTGGAACATCAATGTCTTGTCCTCATGTGGCAGGAATAGCAGCACTCATAAAATCCAAACACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGGCGAGTCAACGAACATCAACATAGTTGTTTGGTTTCTATCCATCCAAATTATCTTCAAATTTCAATTTTACTAGAAGTGACAGAAAGTAATTTTTGTGTTGGTTTAAAAATTTACACTACTTTAATATACTTTCCAAAGTAAAAATAAATAACTTCACTTCAAAATCAATTATCATCTAATCATCTCTAAGTACATCTGTTAGTGCTCTCTGAGCCTTAAGGCTTGTCTGACCCTGGTGAGCCCCTAAGACCCAACTCACCTAAACTTTTACAACAACAACAACCAAGCCTTATCCCACTAAGTGGGGTCGGCTACATGGATCACCTAAACTTTTCTTTATAAAATAATATCATCAAATCAGTTTTACATAACCAATAATATCAAATCAGTTTTACATAACCAATAATAGTCTCAACATTGAAAAGTGCAGCCTCTCAAAGCGGAACTGATGGAGGCCTTATATCAGAAGAAGGTTCCACAAATAAGGCAGCAGACCCATTTGATATCGGGGGAGGACACGTGGATCCTAACAAAGCAATCAATGCAGGACTCATATACAACATTACCACAGAGGATTATATCCAATTCCTATGTTCCATGGGTCATAATACAGCATCTATTAGAAAAGTGACCAAAACCACTACAAGTTGCAACAAACAAAAAAGACGAGCACTGTTGAACCTTAACCTTCCTTCCATATCAATTCCAAACCTGAAGAGTCATACAACAGTAATGAGAACAGTGACAAACGTTGGAAACATAAATGTAGTCTACAAAGCTATAGTGAATAGTCCTTATGGTATAAAAGTGAGAGTTGAACCTCAAATTTTGAACTTCAATTCAGAAATCAAAGTACTTACCTTCAACGTAAGCTTCATTTCAACTCAAAAGTTGCATGGTGATTACAGATTTGGAAGCCTAACATGGACAGATGGCAATCATTTTGTGAGGATACCAATAGCTGTTAGGACCATACAATTTGAATATTAA
Protein sequence

>MS.gene08983.t1

MMETNSGNKRCARKVQLLVTSALLLLQSFLIIPEIFAEESSSVHIVYMGEKIYHNPETAKKYHHKMLSSLLGSKEDAKNSLLYSYKHGFSGFAARMTKSQAEDIAKFPEVVSVIPNGIHKLHTTRSWDFIGVHHPSSKTVFTESNLGQGTIIGVIDTGIWPESASFNDEAMGKIPSKWKGVCQVGEKFNSTNCNKKIIGARWFLKGITDHTKNLILGNNDTTEYLSARDAIGHGTHTASTAAGYYVENANYRGLASGLARGGAPLAHLAIYKACWDVPVGHCTDADILKAFDMAIHDGVDVLTVSLGIGIPLFSYVDQRDTIAIGSFDATSKGITVVSSAGNSGPISQTVSNTAPWLITVAATTIDRTFPTAITLGNNLTLWGQSIDNGKHSLGFVGLTYSERIARDPSDDLAKDCQSGSLNETMAAGKIVLCFSVSDQQDIVSAALTVKEAGGVGLIYAQRHEDGLNECGILPCIKVDYEAGTQLLTYIRRARFPTARLSFPKTVIGKWISPRVASFSSRGPSTLSPTVLKPDIAAPGVDILAAFPPKGSKKSSGFIFLSGTSMSCPHVAGIAALIKSKHPTWSPAAIRSALVTTGESTNINIVVCAASQSGTDGGLISEEGSTNKAADPFDIGGGHVDPNKAINAGLIYNITTEDYIQFLCSMGHNTASIRKVTKTTTSCNKQKRRALLNLNLPSISIPNLKSHTTVMRTVTNVGNINVVYKAIVNSPYGIKVRVEPQILNFNSEIKVLTFNVSFISTQKLHGDYRFGSLTWTDGNHFVRIPIAVRTIQFEY