Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023488.t1 | XP_003629601.1 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 7.10E-279 | 969.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023488.t1 | O23254 | 88.7 | 471 | 53 | 0 | 1 | 471 | 1 | 471 | 9.5e-256 | 883.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023488.t1 | G7LH57 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 5.1e-279 | 969.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29165 | MS.gene023488 | PPI |
| MS.gene023488 | MS.gene027729 | PPI |
| MS.gene047182 | MS.gene023488 | PPI |
| MS.gene023488 | MS.gene00638 | PPI |
| MS.gene86222 | MS.gene023488 | PPI |
| MS.gene023488 | MS.gene072040 | PPI |
| MS.gene44289 | MS.gene023488 | PPI |
| MS.gene023488 | MS.gene002066 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023488.t1 | MTR_8g081510 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 975 |
| MS.gene023488.t1 | MTR_3g084310 | 93.418 | 471 | 31 | 0 | 1 | 471 | 1 | 471 | 0.0 | 928 |
| MS.gene023488.t1 | MTR_3g084310 | 93.132 | 364 | 25 | 0 | 1 | 364 | 1 | 364 | 0.0 | 720 |
| MS.gene023488.t1 | MTR_2g006570 | 64.224 | 464 | 161 | 1 | 4 | 462 | 128 | 591 | 0.0 | 648 |
| MS.gene023488.t1 | MTR_3g073470 | 63.991 | 461 | 158 | 2 | 7 | 462 | 118 | 575 | 0.0 | 633 |
| MS.gene023488.t1 | MTR_2g006570 | 64.524 | 420 | 144 | 1 | 48 | 462 | 1 | 420 | 0.0 | 587 |
| MS.gene023488.t1 | MTR_5g067060 | 58.030 | 467 | 187 | 5 | 9 | 469 | 42 | 505 | 0.0 | 556 |
| MS.gene023488.t1 | MTR_5g030950 | 58.155 | 466 | 188 | 4 | 9 | 469 | 53 | 516 | 0.0 | 554 |
| MS.gene023488.t1 | MTR_2g018290 | 57.860 | 458 | 173 | 5 | 12 | 461 | 87 | 532 | 0.0 | 537 |
| MS.gene023488.t1 | MTR_7g108420 | 47.380 | 439 | 188 | 9 | 37 | 462 | 1 | 409 | 1.71e-126 | 374 |
| MS.gene023488.t1 | MTR_1g073580 | 35.526 | 152 | 92 | 2 | 317 | 462 | 83 | 234 | 1.60e-22 | 96.7 |
| MS.gene023488.t1 | MTR_1g073580 | 44.318 | 88 | 44 | 2 | 157 | 244 | 1 | 83 | 6.84e-18 | 83.6 |
| MS.gene023488.t1 | MTR_3g062030 | 59.494 | 79 | 28 | 1 | 274 | 352 | 13 | 87 | 3.24e-21 | 92.8 |
| MS.gene023488.t1 | MTR_7g070020 | 53.659 | 82 | 28 | 2 | 336 | 410 | 1 | 79 | 7.85e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023488.t1 | AT4G13930 | 88.747 | 471 | 53 | 0 | 1 | 471 | 1 | 471 | 0.0 | 889 |
| MS.gene023488.t1 | AT4G13890 | 78.205 | 468 | 102 | 0 | 1 | 468 | 1 | 468 | 0.0 | 794 |
| MS.gene023488.t1 | AT4G13890 | 79.284 | 391 | 81 | 0 | 1 | 391 | 1 | 391 | 0.0 | 674 |
| MS.gene023488.t1 | AT1G36370 | 62.446 | 466 | 170 | 1 | 4 | 464 | 130 | 595 | 0.0 | 629 |
| MS.gene023488.t1 | AT1G22020 | 62.069 | 464 | 171 | 1 | 4 | 462 | 134 | 597 | 0.0 | 623 |
| MS.gene023488.t1 | AT1G22020 | 62.069 | 464 | 171 | 1 | 4 | 462 | 134 | 597 | 0.0 | 623 |
| MS.gene023488.t1 | AT4G32520 | 59.570 | 465 | 169 | 6 | 3 | 461 | 77 | 528 | 0.0 | 567 |
| MS.gene023488.t1 | AT4G32520 | 59.570 | 465 | 169 | 6 | 3 | 461 | 77 | 528 | 0.0 | 567 |
| MS.gene023488.t1 | AT4G37930 | 57.692 | 468 | 191 | 4 | 9 | 471 | 52 | 517 | 0.0 | 565 |
| MS.gene023488.t1 | AT5G26780 | 56.197 | 468 | 198 | 4 | 9 | 471 | 52 | 517 | 0.0 | 546 |
| MS.gene023488.t1 | AT5G26780 | 56.197 | 468 | 198 | 4 | 9 | 471 | 52 | 517 | 0.0 | 546 |
| MS.gene023488.t1 | AT5G26780 | 54.752 | 484 | 196 | 6 | 9 | 471 | 52 | 533 | 0.0 | 537 |
| MS.gene023488.t1 | AT5G26780 | 54.752 | 484 | 196 | 6 | 9 | 471 | 52 | 533 | 0.0 | 537 |
Find 150 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCAGGCTGGCCCTTCT+TGG | 0.198683 | 4.3:+15543196 | None:intergenic |
| ATTTGGTATGCCTGGTTTCC+TGG | 0.216412 | 4.3:-15542184 | MS.gene023488:CDS |
| TGGCCCTTCTTGGGTGGTTT+AGG | 0.220073 | 4.3:+15543206 | None:intergenic |
| TAATCCTCATGATCGGATTA+TGG | 0.228344 | 4.3:-15544700 | MS.gene023488:CDS |
| CTTTGAGAGTTTGCCGTATA+AGG | 0.255272 | 4.3:-15544595 | MS.gene023488:CDS |
| TCGATTAGGTCGTGGATCTC+TGG | 0.281015 | 4.3:+15545005 | None:intergenic |
| ACTCATGGTTACTATACTTC+TGG | 0.285243 | 4.3:-15544648 | MS.gene023488:CDS |
| TTCTCAGGCTGGCCCTTCTT+GGG | 0.286161 | 4.3:+15543197 | None:intergenic |
| GAGAAGTTCTCTTCTTCATT+TGG | 0.300016 | 4.3:-15542201 | MS.gene023488:CDS |
| ATTGGGATTATAAACGGTTT+AGG | 0.311040 | 4.3:-15544470 | MS.gene023488:CDS |
| TTGGGATTATAAACGGTTTA+GGG | 0.317920 | 4.3:-15544469 | MS.gene023488:CDS |
| ATGGGATTGGATCTTCCTTC+AGG | 0.332967 | 4.3:-15544681 | MS.gene023488:CDS |
| AATCCTCATGATCGGATTAT+GGG | 0.338677 | 4.3:-15544699 | MS.gene023488:CDS |
| CCTTGCTGTTGCCTTGAAAC+AGG | 0.346168 | 4.3:-15543090 | MS.gene023488:CDS |
| TCATATCGATCCACAATCTT+GGG | 0.348360 | 4.3:-15544784 | MS.gene023488:CDS |
| GAAAAGGACTTTGAGAAGAT+TGG | 0.349310 | 4.3:-15542348 | MS.gene023488:CDS |
| TCTTCTTCATTTGGTATGCC+TGG | 0.356704 | 4.3:-15542192 | MS.gene023488:CDS |
| TTCATATCGATCCACAATCT+TGG | 0.361702 | 4.3:-15544785 | MS.gene023488:CDS |
| TAGTGGCCTTGTTGCTGCTC+AGG | 0.366141 | 4.3:-15544397 | MS.gene023488:intron |
| TTGTGGGATCTTCGCCCTCT+TGG | 0.377790 | 4.3:-15542945 | MS.gene023488:CDS |
| CGATTAGGTCGTGGATCTCT+GGG | 0.381977 | 4.3:+15545006 | None:intergenic |
| TTGTTACCCCATTCGTTAAC+GGG | 0.382478 | 4.3:+15545047 | None:intergenic |
| TTCTAGAGGCTTGGTTGAAA+AGG | 0.401166 | 4.3:-15542364 | MS.gene023488:CDS |
| TAGTGCTTACCCTAGGGATT+GGG | 0.404659 | 4.3:-15544487 | MS.gene023488:CDS |
| CATGCCTTCGGAGTATTTGT+TGG | 0.404874 | 4.3:+15544887 | None:intergenic |
| ACAAGAGTTTGAGGGGTCCT+AGG | 0.411398 | 4.3:-15543256 | MS.gene023488:CDS |
| CTAGGGATTGGGATTATAAA+CGG | 0.417514 | 4.3:-15544476 | MS.gene023488:CDS |
| TTGAAACAGGCCATGTCACC+TGG | 0.428213 | 4.3:-15543077 | MS.gene023488:CDS |
| TGCATTGGCCTTAACTTGCT+TGG | 0.435848 | 4.3:+15543040 | None:intergenic |
| GGCCATGTCACCTGGGTTCA+AGG | 0.436813 | 4.3:-15543069 | MS.gene023488:CDS |
| GAAGGATTTCAACAAGGGCT+TGG | 0.437560 | 4.3:-15542262 | MS.gene023488:CDS |
| AAATACTCCGAAGGCATGCC+GGG | 0.440063 | 4.3:-15544882 | MS.gene023488:CDS |
| TTACCAACTCGTACTCCTCC+TGG | 0.440340 | 4.3:+15542739 | None:intergenic |
| TTTGTTACCCCATTCGTTAA+CGG | 0.443616 | 4.3:+15545046 | None:intergenic |
| GGCCATGACTTCTAGAGGCT+TGG | 0.443671 | 4.3:-15542373 | MS.gene023488:CDS |
| TCATGATCGGATTATGGGAT+TGG | 0.447111 | 4.3:-15544694 | MS.gene023488:CDS |
| AGGTGACATGGCCTGTTTCA+AGG | 0.449189 | 4.3:+15543079 | None:intergenic |
| GTAGTGCTTACCCTAGGGAT+TGG | 0.449816 | 4.3:-15544488 | MS.gene023488:CDS |
| GATAGCAGTGCCTTGGCTCC+AGG | 0.451399 | 4.3:-15542757 | MS.gene023488:CDS |
| CAACAGCAAGGGCACCAATC+TGG | 0.454079 | 4.3:+15543102 | None:intergenic |
| GGCATATGCCAAGCAAGTTA+AGG | 0.458758 | 4.3:-15543048 | MS.gene023488:CDS |
| TATGGATCCCGTTAACGAAT+GGG | 0.460396 | 4.3:-15545054 | MS.gene023488:CDS |
| CTTCGCCCTCTTGGATTGAC+TGG | 0.475593 | 4.3:-15542936 | MS.gene023488:intron |
| CAACAACTCACAAGAGTTTG+AGG | 0.475648 | 4.3:-15543265 | MS.gene023488:CDS |
| ACGGTTACCCGGCATGCCTT+CGG | 0.480831 | 4.3:+15544875 | None:intergenic |
| GTGGTGGTAGTGCTTACCCT+AGG | 0.483011 | 4.3:-15544494 | MS.gene023488:CDS |
| AAATCGTAAACTGCATTCTC+AGG | 0.485003 | 4.3:+15543182 | None:intergenic |
| ATTTCCAATGGCAACTGCAT+TGG | 0.485964 | 4.3:+15543025 | None:intergenic |
| AGTTTGAGGGGTCCTAGGGC+TGG | 0.488241 | 4.3:-15543251 | MS.gene023488:CDS |
| CAAATACTCCGAAGGCATGC+CGG | 0.492298 | 4.3:-15544883 | MS.gene023488:CDS |
| CGTAAACTGCATTCTCAGGC+TGG | 0.492457 | 4.3:+15543186 | None:intergenic |
| CTTCTGAAGGATTTCAACAA+GGG | 0.500755 | 4.3:-15542267 | MS.gene023488:CDS |
| GTCGTCGAATTCACCTTATA+CGG | 0.506731 | 4.3:+15544582 | None:intergenic |
| AAGGCCAATGCAGTTGCCAT+TGG | 0.512235 | 4.3:-15543029 | MS.gene023488:CDS |
| TCAGGCTGGCCCTTCTTGGG+TGG | 0.515292 | 4.3:+15543200 | None:intergenic |
| GGGCTGGAATGATCTTCTAC+AGG | 0.516037 | 4.3:-15543235 | MS.gene023488:CDS |
| GGGACCTAAACCACCCAAGA+AGG | 0.517255 | 4.3:-15543210 | MS.gene023488:CDS |
| TGAGAACCATCTTGTGTTGT+GGG | 0.518139 | 4.3:-15542961 | MS.gene023488:CDS |
| TCAGGTGGACATTTGACTCA+TGG | 0.518530 | 4.3:-15544663 | MS.gene023488:CDS |
| TGGAAATTACTTGATGAGCA+AGG | 0.520445 | 4.3:-15543009 | MS.gene023488:CDS |
| CGTTTATAATCCCAATCCCT+AGG | 0.523617 | 4.3:+15544477 | None:intergenic |
| AGGCCTAGGTTGATTATCTG+TGG | 0.524395 | 4.3:-15544513 | MS.gene023488:CDS |
| GTTAACGTTCAGCCTTACTC+TGG | 0.524720 | 4.3:-15544759 | MS.gene023488:CDS |
| GGATTTCAACAAGGGCTTGG+TGG | 0.525840 | 4.3:-15542259 | MS.gene023488:CDS |
| CAAGAGTTTGAGGGGTCCTA+GGG | 0.529217 | 4.3:-15543255 | MS.gene023488:CDS |
| GTCGTGGATCTCTGGGTCGA+CGG | 0.531722 | 4.3:+15545013 | None:intergenic |
| TTCGCCGGTGAACCAGAGTA+AGG | 0.533517 | 4.3:+15544747 | None:intergenic |
| TAGGTTGGAGGAGAAAGCGT+TGG | 0.534852 | 4.3:-15544541 | MS.gene023488:CDS |
| GGAAATTACTTGATGAGCAA+GGG | 0.542211 | 4.3:-15543008 | MS.gene023488:CDS |
| CACAATGTCACAGTACTCAA+AGG | 0.544775 | 4.3:+15543292 | None:intergenic |
| ACAATGTCACAGTACTCAAA+GGG | 0.547706 | 4.3:+15543293 | None:intergenic |
| TGGTGGTAGTGCTTACCCTA+GGG | 0.548765 | 4.3:-15544493 | MS.gene023488:CDS |
| AACAACTCACAAGAGTTTGA+GGG | 0.550530 | 4.3:-15543264 | MS.gene023488:CDS |
| TATTGATTATGATAGGTTGG+AGG | 0.550910 | 4.3:-15544553 | MS.gene023488:CDS |
| TTGGCATATGCCTTGAACCC+AGG | 0.551473 | 4.3:+15543059 | None:intergenic |
| AAGCTTGAAGAGCGCGTGAA+CGG | 0.551498 | 4.3:+15544808 | None:intergenic |
| TAGAAGATCATTCCAGCCCT+AGG | 0.552646 | 4.3:+15543239 | None:intergenic |
| TGCCTTGAACCCAGGTGACA+TGG | 0.553241 | 4.3:+15543067 | None:intergenic |
| ATTGTGAGGACCACCTTGAA+GGG | 0.554639 | 4.3:+15543127 | None:intergenic |
| CATATCGATCCACAATCTTG+GGG | 0.560138 | 4.3:-15544783 | MS.gene023488:CDS |
| CCACCGTAGTAACGGTTACC+CGG | 0.562429 | 4.3:+15544864 | None:intergenic |
| TTATGGATCCCGTTAACGAA+TGG | 0.563507 | 4.3:-15545055 | MS.gene023488:CDS |
| GATGTTCTTTGCAGGAAACA+AGG | 0.566091 | 4.3:-15542836 | MS.gene023488:intron |
| TGAGGACCACCTTGAAGGGA+AGG | 0.566539 | 4.3:+15543131 | None:intergenic |
| CAAGGGCTTGGTGGACAACA+AGG | 0.566901 | 4.3:-15542250 | MS.gene023488:CDS |
| AACCAAGCCTCTAGAAGTCA+TGG | 0.567694 | 4.3:+15542371 | None:intergenic |
| GGTCCTCACAATCACCAGAT+TGG | 0.567733 | 4.3:-15543116 | MS.gene023488:CDS |
| GATTGTGAGGACCACCTTGA+AGG | 0.568372 | 4.3:+15543126 | None:intergenic |
| GAGAGCTTCGATGACGGCGA+AGG | 0.570081 | 4.3:+15544923 | None:intergenic |
| ATTCGTTACCACCGTAGTAA+CGG | 0.570397 | 4.3:+15544856 | None:intergenic |
| ATCTCAGATACCAGGAAACC+AGG | 0.570656 | 4.3:+15542174 | None:intergenic |
| ACGTTAACTCCCCAAGATTG+TGG | 0.570906 | 4.3:+15544774 | None:intergenic |
| CATGGTTACTATACTTCTGG+TGG | 0.572834 | 4.3:-15544645 | MS.gene023488:CDS |
| TTCTGGTGGGAAGAAGATCT+CGG | 0.577762 | 4.3:-15544631 | MS.gene023488:CDS |
| TCGTACTCCTCCTGGAGCCA+AGG | 0.577883 | 4.3:+15542747 | None:intergenic |
| GCTCATCAAGTAATTTCCAA+TGG | 0.578871 | 4.3:+15543013 | None:intergenic |
| GGAGCATGGAAAACTTCTGA+AGG | 0.579867 | 4.3:-15542280 | MS.gene023488:CDS |
| GTGTAAGCAGCGAAATTCGC+CGG | 0.580461 | 4.3:+15544732 | None:intergenic |
| CTAGAGATCCAGAAGGAGCA+TGG | 0.581707 | 4.3:-15542294 | MS.gene023488:CDS |
| CTGAGAACCATCTTGTGTTG+TGG | 0.583570 | 4.3:-15542962 | MS.gene023488:CDS |
| GGATTGGATCTTCCTTCAGG+TGG | 0.584238 | 4.3:-15544678 | MS.gene023488:CDS |
| ACTTCTGAAGGATTTCAACA+AGG | 0.584978 | 4.3:-15542268 | MS.gene023488:CDS |
| AAGGGATACAGTCTTGTCAC+TGG | 0.587154 | 4.3:-15542990 | MS.gene023488:CDS |
| TTCGCCGTCATCGAAGCTCT+CGG | 0.587338 | 4.3:-15544921 | MS.gene023488:CDS |
| TGGAATGATCTTCTACAGGA+AGG | 0.588696 | 4.3:-15543231 | MS.gene023488:CDS |
| TGAGTGTCACAGCACGGTGA+AGG | 0.589218 | 4.3:+15542319 | None:intergenic |
| GCTGCCGAGAGCTTCGATGA+CGG | 0.601481 | 4.3:+15544917 | None:intergenic |
| GAAGATCCCACAACACAAGA+TGG | 0.603113 | 4.3:+15542955 | None:intergenic |
| CTGTTTCAAGGCAACAGCAA+GGG | 0.603551 | 4.3:+15543091 | None:intergenic |
| CCTAGGTTGATTATCTGTGG+TGG | 0.604842 | 4.3:-15544510 | MS.gene023488:CDS |
| AGTTCTGTTAACAGGTGCTC+CGG | 0.607108 | 4.3:-15542394 | MS.gene023488:intron |
| TATAAGGTGAATTCGACGAC+TGG | 0.610662 | 4.3:-15544579 | MS.gene023488:CDS |
| GGAATGATCTTCTACAGGAA+GGG | 0.611076 | 4.3:-15543230 | MS.gene023488:CDS |
| GGATACAGTCTTGTCACTGG+TGG | 0.612060 | 4.3:-15542987 | MS.gene023488:CDS |
| TGAGTCAAATGTCCACCTGA+AGG | 0.612892 | 4.3:+15544666 | None:intergenic |
| GGACCTAAACCACCCAAGAA+GGG | 0.613785 | 4.3:-15543209 | MS.gene023488:CDS |
| GCTCCGGCCATGACTTCTAG+AGG | 0.616605 | 4.3:-15542378 | MS.gene023488:CDS |
| CCGTGCTTAATCCTCATGAT+CGG | 0.621696 | 4.3:-15544707 | MS.gene023488:CDS |
| TGTACTTCATCTCAGATACC+AGG | 0.622326 | 4.3:+15542166 | None:intergenic |
| GTTTATAATCCCAATCCCTA+GGG | 0.625521 | 4.3:+15544478 | None:intergenic |
| AGGGATGTTGCTGATAAGTG+TGG | 0.626741 | 4.3:-15544450 | MS.gene023488:CDS |
| TGAAACAGGCCATGTCACCT+GGG | 0.627178 | 4.3:-15543076 | MS.gene023488:CDS |
| GCACCAATCTGGTGATTGTG+AGG | 0.629254 | 4.3:+15543113 | None:intergenic |
| AAGCCTCTAGAAGTCATGGC+CGG | 0.629761 | 4.3:+15542375 | None:intergenic |
| CCTGTTTCAAGGCAACAGCA+AGG | 0.630010 | 4.3:+15543090 | None:intergenic |
| TTTATACCTGAGCAGCAACA+AGG | 0.632475 | 4.3:+15544391 | None:intergenic |
| CGGAATCGAACTCATCGCAT+CGG | 0.632638 | 4.3:-15544958 | MS.gene023488:CDS |
| GGTATCTGAGATGAAGTACA+AGG | 0.632761 | 4.3:-15542163 | MS.gene023488:CDS |
| GCTCCAGGAGGAGTACGAGT+TGG | 0.634787 | 4.3:-15542742 | MS.gene023488:intron |
| TCAGCCTTACTCTGGTTCAC+CGG | 0.636199 | 4.3:-15544751 | MS.gene023488:CDS |
| CCACCACAGATAATCAACCT+AGG | 0.638606 | 4.3:+15544510 | None:intergenic |
| CTTTACCAGTCAATCCAAGA+GGG | 0.641081 | 4.3:+15542931 | None:intergenic |
| ATGGATCCCGTTAACGAATG+GGG | 0.646563 | 4.3:-15545053 | MS.gene023488:CDS |
| AATCCCATAATCCGATCATG+AGG | 0.648526 | 4.3:+15544696 | None:intergenic |
| ATGGTTACTATACTTCTGGT+GGG | 0.651704 | 4.3:-15544644 | MS.gene023488:CDS |
| ATGCCGGGTAACCGTTACTA+CGG | 0.653366 | 4.3:-15544867 | MS.gene023488:CDS |
| TCTGGGTCGACGGTTACGAG+TGG | 0.653406 | 4.3:+15545023 | None:intergenic |
| TTAACCAACAAATACTCCGA+AGG | 0.658341 | 4.3:-15544891 | MS.gene023488:CDS |
| ATGCGATGAGTTCGATTCCG+CGG | 0.660307 | 4.3:+15544961 | None:intergenic |
| GAGGACCACCTTGAAGGGAA+GGG | 0.667267 | 4.3:+15543132 | None:intergenic |
| TGTTGACTGTGATGTTACAG+AGG | 0.668976 | 4.3:+15542797 | None:intergenic |
| CCGGGTAACCGTTACTACGG+TGG | 0.669545 | 4.3:-15544864 | MS.gene023488:CDS |
| ACAACTCACAAGAGTTTGAG+GGG | 0.676117 | 4.3:-15543263 | MS.gene023488:CDS |
| CCGATCATGAGGATTAAGCA+CGG | 0.689739 | 4.3:+15544707 | None:intergenic |
| GTTCTTTGCAGGAAACAAGG+TGG | 0.691862 | 4.3:-15542833 | MS.gene023488:intron |
| AGCAGTGCCTTGGCTCCAGG+AGG | 0.693630 | 4.3:-15542754 | MS.gene023488:CDS |
| CCTTTACCAGTCAATCCAAG+AGG | 0.696201 | 4.3:+15542930 | None:intergenic |
| CTAGTGTGAGTGTCACAGCA+CGG | 0.697489 | 4.3:+15542313 | None:intergenic |
| ACTCACACTAGAGATCCAGA+AGG | 0.729137 | 4.3:-15542301 | MS.gene023488:CDS |
| ATCATGAGGATTAAGCACGG+CGG | 0.835014 | 4.3:+15544710 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGATCCATTAAATTA+AGG | + | chr4.3:15543059-15543078 | None:intergenic | 15.0% |
| !! | AAGAACATCAATAATATTTA+GGG | - | chr4.3:15543488-15543507 | MS.gene023488:intron | 15.0% |
| !! | AATAAGATCCATTAAATTAA+GGG | + | chr4.3:15543058-15543077 | None:intergenic | 15.0% |
| !! | TAAATATTATTGATGTTCTT+GGG | + | chr4.3:15543488-15543507 | None:intergenic | 15.0% |
| !! | TATGAATCTAATTAACATAA+CGG | + | chr4.3:15542876-15542895 | None:intergenic | 15.0% |
| !! | TTGAGTAAAATATAAAACAA+AGG | + | chr4.3:15544784-15544803 | None:intergenic | 15.0% |
| !!! | TTTGTTTTATATTTTACTCA+AGG | - | chr4.3:15544783-15544802 | MS.gene023488:CDS | 15.0% |
| !!! | TTTTTTTTTTTTTTTTGTGG+TGG | - | chr4.3:15543334-15543353 | MS.gene023488:intron | 15.0% |
| !! | ACAAATCAAATAATACTACT+TGG | + | chr4.3:15544639-15544658 | None:intergenic | 20.0% |
| !! | CAAGAACATCAATAATATTT+AGG | - | chr4.3:15543487-15543506 | MS.gene023488:intron | 20.0% |
| !! | CTAAATATTATTGATGTTCT+TGG | + | chr4.3:15543489-15543508 | None:intergenic | 20.0% |
| !! | TAATGTAAGGATTTATTAGA+AGG | - | chr4.3:15543779-15543798 | MS.gene023488:intron | 20.0% |
| !! | TATACAGTAACAAGATTAAA+AGG | + | chr4.3:15544734-15544753 | None:intergenic | 20.0% |
| !!! | ATAATATGACTTGTTTTGTT+TGG | - | chr4.3:15543842-15543861 | MS.gene023488:intron | 20.0% |
| !!! | GCATATTTACAATTTTTACA+TGG | + | chr4.3:15544671-15544690 | None:intergenic | 20.0% |
| !!! | TATGGACTTAACTTTATTTT+CGG | - | chr4.3:15544504-15544523 | MS.gene023488:CDS | 20.0% |
| !!! | TTTTATTGATTATGATAGGT+TGG | - | chr4.3:15542655-15542674 | MS.gene023488:intron | 20.0% |
| ! | AATAAATCCTTACATTACCA+AGG | + | chr4.3:15543776-15543795 | None:intergenic | 25.0% |
| ! | ATTAAATTAAGGGAAATGTC+GGG | + | chr4.3:15543048-15543067 | None:intergenic | 25.0% |
| ! | CATTAAATTAAGGGAAATGT+CGG | + | chr4.3:15543049-15543068 | None:intergenic | 25.0% |
| ! | TACTCCTTATAGTTATACTA+TGG | + | chr4.3:15543716-15543735 | None:intergenic | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr4.3:15543627-15543646 | None:intergenic | 25.0% |
| ! | TGTGTAATCAATGCATTAAA+AGG | + | chr4.3:15542980-15542999 | None:intergenic | 25.0% |
| ! | TTTATATTGCGTACTATTTC+TGG | - | chr4.3:15544333-15544352 | MS.gene023488:intron | 25.0% |
| !! | ATCGATAAACTTGTCTTTTA+AGG | - | chr4.3:15543301-15543320 | MS.gene023488:CDS | 25.0% |
| !! | CAAGTTGTTGTAAATTTTGT+TGG | - | chr4.3:15544557-15544576 | MS.gene023488:CDS | 25.0% |
| !!! | CTGGTTTTATTGATTATGAT+AGG | - | chr4.3:15542651-15542670 | MS.gene023488:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr4.3:15543514-15543533 | None:intergenic | 30.0% | |
| AAAAATTAGCCAATCCAAAC+GGG | - | chr4.3:15543690-15543709 | MS.gene023488:intron | 30.0% | |
| AATAGTACGCAATATAAACC+AGG | + | chr4.3:15544331-15544350 | None:intergenic | 30.0% | |
| ATTGGGATTATAAACGGTTT+AGG | - | chr4.3:15542741-15542760 | MS.gene023488:intron | 30.0% | |
| CAAAAATAAGCCAATCCAAA+CGG | + | chr4.3:15543515-15543534 | None:intergenic | 30.0% | |
| CAAAAATTAGCCAATCCAAA+CGG | - | chr4.3:15543689-15543708 | MS.gene023488:intron | 30.0% | |
| CGACATTTCCCTTAATTTAA+TGG | - | chr4.3:15543047-15543066 | MS.gene023488:CDS | 30.0% | |
| CTACTTGGTAAAGAAATGAA+AGG | + | chr4.3:15544624-15544643 | None:intergenic | 30.0% | |
| CTATGATAAACATTGATGCT+AGG | - | chr4.3:15543450-15543469 | MS.gene023488:intron | 30.0% | |
| GTTGGAAATCAATTTGATTG+AGG | - | chr4.3:15544575-15544594 | MS.gene023488:CDS | 30.0% | |
| TAAGTTCTCACTAACGAAAA+TGG | - | chr4.3:15543571-15543590 | MS.gene023488:intron | 30.0% | |
| TTAAATTAAGGGAAATGTCG+GGG | + | chr4.3:15543047-15543066 | None:intergenic | 30.0% | |
| TTCACTGTAAACAAACTATG+AGG | + | chr4.3:15543177-15543196 | None:intergenic | 30.0% | |
| TTGGGATTATAAACGGTTTA+GGG | - | chr4.3:15542742-15542761 | MS.gene023488:intron | 30.0% | |
| TTTATCATAGCCCAGTTTAT+AGG | + | chr4.3:15543440-15543459 | None:intergenic | 30.0% | |
| ! | AACCAGGCAAGATAAATTTT+AGG | + | chr4.3:15544315-15544334 | None:intergenic | 30.0% |
| ! | TATTGATTATGATAGGTTGG+AGG | - | chr4.3:15542658-15542677 | MS.gene023488:intron | 30.0% |
| ! | TATTTTCGGAGTCTAAACTT+GGG | - | chr4.3:15544518-15544537 | MS.gene023488:CDS | 30.0% |
| ! | TTATTGATGTTCTTGGGTTT+TGG | + | chr4.3:15543482-15543501 | None:intergenic | 30.0% |
| ! | TTATTTTCGGAGTCTAAACT+TGG | - | chr4.3:15544517-15544536 | MS.gene023488:CDS | 30.0% |
| ! | TTGTCTCAAAGCTTTTCTTA+CGG | - | chr4.3:15543816-15543835 | MS.gene023488:intron | 30.0% |
| ! | TTGTTGTTATCTATTCCATC+TGG | - | chr4.3:15543231-15543250 | MS.gene023488:CDS | 30.0% |
| !! | AGTTGGTAAGAAACTTTGTA+TGG | - | chr4.3:15544486-15544505 | MS.gene023488:CDS | 30.0% |
| !! | TAGTTATTTGTTGTGTGTAC+AGG | - | chr4.3:15543884-15543903 | MS.gene023488:intron | 30.0% |
| !!! | GACGTTTTTCTTTTTCGATT+AGG | + | chr4.3:15542223-15542242 | None:intergenic | 30.0% |
| !!! | GTCAACAAAAATGCTGTTTT+TGG | - | chr4.3:15544430-15544449 | MS.gene023488:CDS | 30.0% |
| !!! | TTGATTATTTTTAGCCACCT+TGG | - | chr4.3:15543756-15543775 | MS.gene023488:intron | 30.0% |
| !!! | TTTTTTTTTTTTGTGGTGGC+CGG | - | chr4.3:15543338-15543357 | MS.gene023488:intron | 30.0% |
| AAATCCTTACATTACCAAGG+TGG | + | chr4.3:15543773-15543792 | None:intergenic | 35.0% | |
| AAATCGTAAACTGCATTCTC+AGG | + | chr4.3:15544032-15544051 | None:intergenic | 35.0% | |
| AACAACTCACAAGAGTTTGA+GGG | - | chr4.3:15543947-15543966 | MS.gene023488:intron | 35.0% | |
| AATCCTCATGATCGGATTAT+GGG | - | chr4.3:15542512-15542531 | MS.gene023488:intron | 35.0% | |
| ACAATGCCTTACCTATAAAC+TGG | - | chr4.3:15543426-15543445 | MS.gene023488:intron | 35.0% | |
| ACAATGTCACAGTACTCAAA+GGG | + | chr4.3:15543921-15543940 | None:intergenic | 35.0% | |
| ACTCATGGTTACTATACTTC+TGG | - | chr4.3:15542563-15542582 | MS.gene023488:intron | 35.0% | |
| ATAAAGCCCATTCATTTGTC+TGG | + | chr4.3:15543374-15543393 | None:intergenic | 35.0% | |
| ATGGTTACTATACTTCTGGT+GGG | - | chr4.3:15542567-15542586 | MS.gene023488:intron | 35.0% | |
| CAATGCCTTACCTATAAACT+GGG | - | chr4.3:15543427-15543446 | MS.gene023488:intron | 35.0% | |
| CACCTAAAATTTATCTTGCC+TGG | - | chr4.3:15544310-15544329 | MS.gene023488:intron | 35.0% | |
| CTAGGGATTGGGATTATAAA+CGG | - | chr4.3:15542735-15542754 | MS.gene023488:intron | 35.0% | |
| GAGAAGTTCTCTTCTTCATT+TGG | - | chr4.3:15545010-15545029 | MS.gene023488:CDS | 35.0% | |
| GCTCATCAAGTAATTTCCAA+TGG | + | chr4.3:15544201-15544220 | None:intergenic | 35.0% | |
| GGAAATTACTTGATGAGCAA+GGG | - | chr4.3:15544203-15544222 | MS.gene023488:intron | 35.0% | |
| GTTTATAATCCCAATCCCTA+GGG | + | chr4.3:15542736-15542755 | None:intergenic | 35.0% | |
| TAAAGCCCATTCATTTGTCT+GGG | + | chr4.3:15543373-15543392 | None:intergenic | 35.0% | |
| TAAATTAAGGGAAATGTCGG+GGG | + | chr4.3:15543046-15543065 | None:intergenic | 35.0% | |
| TAATCCTCATGATCGGATTA+TGG | - | chr4.3:15542511-15542530 | MS.gene023488:intron | 35.0% | |
| TCATATCGATCCACAATCTT+GGG | - | chr4.3:15542427-15542446 | MS.gene023488:intron | 35.0% | |
| TCTTGTTCCGTTGAATTAGA+GGG | - | chr4.3:15543137-15543156 | MS.gene023488:CDS | 35.0% | |
| TGGAAATTACTTGATGAGCA+AGG | - | chr4.3:15544202-15544221 | MS.gene023488:intron | 35.0% | |
| TTAACCAACAAATACTCCGA+AGG | - | chr4.3:15542320-15542339 | MS.gene023488:CDS | 35.0% | |
| TTCATATCGATCCACAATCT+TGG | - | chr4.3:15542426-15542445 | MS.gene023488:intron | 35.0% | |
| TTCTTGTTCCGTTGAATTAG+AGG | - | chr4.3:15543136-15543155 | MS.gene023488:CDS | 35.0% | |
| TTTGTTACCCCATTCGTTAA+CGG | + | chr4.3:15542168-15542187 | None:intergenic | 35.0% | |
| ! | AACGGCAAAGATTTTCGATT+TGG | + | chr4.3:15542388-15542407 | None:intergenic | 35.0% |
| ! | AATAATATTTAGGGCCCGTT+TGG | - | chr4.3:15543497-15543516 | MS.gene023488:intron | 35.0% |
| ! | ACTTCTGAAGGATTTCAACA+AGG | - | chr4.3:15544943-15544962 | MS.gene023488:CDS | 35.0% |
| ! | CTTCTGAAGGATTTCAACAA+GGG | - | chr4.3:15544944-15544963 | MS.gene023488:CDS | 35.0% |
| ! | GAAAAGGACTTTGAGAAGAT+TGG | - | chr4.3:15544863-15544882 | MS.gene023488:CDS | 35.0% |
| ! | GAATGCAGTTTACGATTTTG+AGG | - | chr4.3:15544034-15544053 | MS.gene023488:intron | 35.0% |
| ! | TGCTCTTTTGCTTTGTGATA+TGG | - | chr4.3:15542784-15542803 | MS.gene023488:CDS | 35.0% |
| ! | TGTGATATGGCTCATTTTAG+TGG | - | chr4.3:15542797-15542816 | MS.gene023488:CDS | 35.0% |
| ! | TTTCTGGAAACTTAATCTCG+CGG | - | chr4.3:15544349-15544368 | MS.gene023488:intron | 35.0% |
| !! | GGCAAGATAAATTTTAGGTG+AGG | + | chr4.3:15544310-15544329 | None:intergenic | 35.0% |
| !!! | TTTCTTTTTCGATTAGGTCG+TGG | + | chr4.3:15542217-15542236 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTTGTGGTGGCC+GGG | - | chr4.3:15543339-15543358 | MS.gene023488:intron | 35.0% |
| AAAGCCCATTCATTTGTCTG+GGG | + | chr4.3:15543372-15543391 | None:intergenic | 40.0% | |
| AATCCCATAATCCGATCATG+AGG | + | chr4.3:15542518-15542537 | None:intergenic | 40.0% | |
| ACAACTCACAAGAGTTTGAG+GGG | - | chr4.3:15543948-15543967 | MS.gene023488:intron | 40.0% | |
| ATTCGTTACCACCGTAGTAA+CGG | + | chr4.3:15542358-15542377 | None:intergenic | 40.0% | |
| ATTTCCAATGGCAACTGCAT+TGG | + | chr4.3:15544189-15544208 | None:intergenic | 40.0% | |
| CAACAACTCACAAGAGTTTG+AGG | - | chr4.3:15543946-15543965 | MS.gene023488:intron | 40.0% | |
| CACAATGTCACAGTACTCAA+AGG | + | chr4.3:15543922-15543941 | None:intergenic | 40.0% | |
| CATACTCCCCTCTAATTCAA+CGG | + | chr4.3:15543147-15543166 | None:intergenic | 40.0% | |
| CATAGCCCAGTTTATAGGTA+AGG | + | chr4.3:15543435-15543454 | None:intergenic | 40.0% | |
| CATATCGATCCACAATCTTG+GGG | - | chr4.3:15542428-15542447 | MS.gene023488:intron | 40.0% | |
| CATGGTTACTATACTTCTGG+TGG | - | chr4.3:15542566-15542585 | MS.gene023488:intron | 40.0% | |
| CCATCTGGATCTGTTGTTAA+AGG | - | chr4.3:15543246-15543265 | MS.gene023488:CDS | 40.0% | |
| CCTTTAACAACAGATCCAGA+TGG | + | chr4.3:15543249-15543268 | None:intergenic | 40.0% | |
| CGGGCCATAGTATAACTATA+AGG | - | chr4.3:15543709-15543728 | MS.gene023488:intron | 40.0% | |
| CGTTTATAATCCCAATCCCT+AGG | + | chr4.3:15542737-15542756 | None:intergenic | 40.0% | |
| CTTGTTCCGTTGAATTAGAG+GGG | - | chr4.3:15543138-15543157 | MS.gene023488:CDS | 40.0% | |
| CTTTACCAGTCAATCCAAGA+GGG | + | chr4.3:15544283-15544302 | None:intergenic | 40.0% | |
| GATGTTCTTTGCAGGAAACA+AGG | - | chr4.3:15544375-15544394 | MS.gene023488:intron | 40.0% | |
| GGAATGATCTTCTACAGGAA+GGG | - | chr4.3:15543981-15544000 | MS.gene023488:intron | 40.0% | |
| GTCGTCGAATTCACCTTATA+CGG | + | chr4.3:15542632-15542651 | None:intergenic | 40.0% | |
| TAGTTATACTATGGCCCGTT+TGG | + | chr4.3:15543707-15543726 | None:intergenic | 40.0% | |
| TATAAGGTGAATTCGACGAC+TGG | - | chr4.3:15542632-15542651 | MS.gene023488:intron | 40.0% | |
| TCATGATCGGATTATGGGAT+TGG | - | chr4.3:15542517-15542536 | MS.gene023488:intron | 40.0% | |
| TCTTCTTCATTTGGTATGCC+TGG | - | chr4.3:15545019-15545038 | MS.gene023488:CDS | 40.0% | |
| TGAGAACCATCTTGTGTTGT+GGG | - | chr4.3:15544250-15544269 | MS.gene023488:intron | 40.0% | |
| TGGAATGATCTTCTACAGGA+AGG | - | chr4.3:15543980-15543999 | MS.gene023488:intron | 40.0% | |
| TGTACTTCATCTCAGATACC+AGG | + | chr4.3:15545048-15545067 | None:intergenic | 40.0% | |
| TTGTTACCCCATTCGTTAAC+GGG | + | chr4.3:15542167-15542186 | None:intergenic | 40.0% | |
| TTTATACCTGAGCAGCAACA+AGG | + | chr4.3:15542823-15542842 | None:intergenic | 40.0% | |
| ! | CTTTGAGAGTTTGCCGTATA+AGG | - | chr4.3:15542616-15542635 | MS.gene023488:intron | 40.0% |
| ! | GGTATCTGAGATGAAGTACA+AGG | - | chr4.3:15545048-15545067 | MS.gene023488:CDS | 40.0% |
| ! | TGTTGACTGTGATGTTACAG+AGG | + | chr4.3:15544417-15544436 | None:intergenic | 40.0% |
| ! | TTCTAGAGGCTTGGTTGAAA+AGG | - | chr4.3:15544847-15544866 | MS.gene023488:CDS | 40.0% |
| ! | TTTTACTCAAGGTAGCTGAC+TGG | - | chr4.3:15544794-15544813 | MS.gene023488:CDS | 40.0% |
| !! | TTAGCCACCTTGGTAATGTA+AGG | - | chr4.3:15543766-15543785 | MS.gene023488:intron | 40.0% |
| !!! | AGGAGAAAGCGTTGGATTTT+AGG | - | chr4.3:15542678-15542697 | MS.gene023488:intron | 40.0% |
| !!! | TTTTTTTTTTGTGGTGGCCG+GGG | - | chr4.3:15543340-15543359 | MS.gene023488:intron | 40.0% |
| ACGTTAACTCCCCAAGATTG+TGG | + | chr4.3:15542440-15542459 | None:intergenic | 45.0% | |
| ACTCACACTAGAGATCCAGA+AGG | - | chr4.3:15544910-15544929 | MS.gene023488:CDS | 45.0% | |
| AGGGATGTTGCTGATAAGTG+TGG | - | chr4.3:15542761-15542780 | MS.gene023488:CDS | 45.0% | |
| AGTTCTGTTAACAGGTGCTC+CGG | - | chr4.3:15544817-15544836 | MS.gene023488:CDS | 45.0% | |
| ATACTATGGCCCGTTTGGAT+TGG | + | chr4.3:15543702-15543721 | None:intergenic | 45.0% | |
| ATCATGAGGATTAAGCACGG+CGG | + | chr4.3:15542504-15542523 | None:intergenic | 45.0% | |
| ATCTCAGATACCAGGAAACC+AGG | + | chr4.3:15545040-15545059 | None:intergenic | 45.0% | |
| ATGGATCCCGTTAACGAATG+GGG | - | chr4.3:15542158-15542177 | MS.gene023488:CDS | 45.0% | |
| ATGGGATTGGATCTTCCTTC+AGG | - | chr4.3:15542530-15542549 | MS.gene023488:intron | 45.0% | |
| ATTGTGAGGACCACCTTGAA+GGG | + | chr4.3:15544087-15544106 | None:intergenic | 45.0% | |
| ATTTGGTATGCCTGGTTTCC+TGG | - | chr4.3:15545027-15545046 | MS.gene023488:CDS | 45.0% | |
| CCACCACAGATAATCAACCT+AGG | + | chr4.3:15542704-15542723 | None:intergenic | 45.0% | |
| CCGATCATGAGGATTAAGCA+CGG | + | chr4.3:15542507-15542526 | None:intergenic | 45.0% | |
| CCGTGCTTAATCCTCATGAT+CGG | - | chr4.3:15542504-15542523 | MS.gene023488:intron | 45.0% | |
| CCTCTTGGATTGACTGGTAA+AGG | - | chr4.3:15544281-15544300 | MS.gene023488:intron | 45.0% | |
| CCTTTACCAGTCAATCCAAG+AGG | + | chr4.3:15544284-15544303 | None:intergenic | 45.0% | |
| CGAACCCCAGACAAATGAAT+GGG | - | chr4.3:15543365-15543384 | MS.gene023488:intron | 45.0% | |
| CTGACTGGAGTTCTGTTAAC+AGG | - | chr4.3:15544809-15544828 | MS.gene023488:CDS | 45.0% | |
| CTGAGAACCATCTTGTGTTG+TGG | - | chr4.3:15544249-15544268 | MS.gene023488:intron | 45.0% | |
| CTGTTTCAAGGCAACAGCAA+GGG | + | chr4.3:15544123-15544142 | None:intergenic | 45.0% | |
| GAAGATCCCACAACACAAGA+TGG | + | chr4.3:15544259-15544278 | None:intergenic | 45.0% | |
| GAAGGATTTCAACAAGGGCT+TGG | - | chr4.3:15544949-15544968 | MS.gene023488:CDS | 45.0% | |
| GGAGCATGGAAAACTTCTGA+AGG | - | chr4.3:15544931-15544950 | MS.gene023488:CDS | 45.0% | |
| GGCATATGCCAAGCAAGTTA+AGG | - | chr4.3:15544163-15544182 | MS.gene023488:intron | 45.0% | |
| GTTAACGTTCAGCCTTACTC+TGG | - | chr4.3:15542452-15542471 | MS.gene023488:intron | 45.0% | |
| GTTCTTTGCAGGAAACAAGG+TGG | - | chr4.3:15544378-15544397 | MS.gene023488:intron | 45.0% | |
| TAGAAGATCATTCCAGCCCT+AGG | + | chr4.3:15543975-15543994 | None:intergenic | 45.0% | |
| TAGTGCTTACCCTAGGGATT+GGG | - | chr4.3:15542724-15542743 | MS.gene023488:intron | 45.0% | |
| TCAGGTGGACATTTGACTCA+TGG | - | chr4.3:15542548-15542567 | MS.gene023488:intron | 45.0% | |
| TCGAACCCCAGACAAATGAA+TGG | - | chr4.3:15543364-15543383 | MS.gene023488:intron | 45.0% | |
| TGAGTCAAATGTCCACCTGA+AGG | + | chr4.3:15542548-15542567 | None:intergenic | 45.0% | |
| TTCTGGTGGGAAGAAGATCT+CGG | - | chr4.3:15542580-15542599 | MS.gene023488:intron | 45.0% | |
| ! | AACCAAGCCTCTAGAAGTCA+TGG | + | chr4.3:15544843-15544862 | None:intergenic | 45.0% |
| ! | AAGGGATACAGTCTTGTCAC+TGG | - | chr4.3:15544221-15544240 | MS.gene023488:intron | 45.0% |
| ! | CATGCCTTCGGAGTATTTGT+TGG | + | chr4.3:15542327-15542346 | None:intergenic | 45.0% |
| ! | GAAGTTTTCCATGCTCCTTC+TGG | + | chr4.3:15544928-15544947 | None:intergenic | 45.0% |
| ! | GGCTTTATAAGCTCCCATCA+TGG | - | chr4.3:15543386-15543405 | MS.gene023488:intron | 45.0% |
| ! | TATTTAGGGCCCGTTTGGAT+TGG | - | chr4.3:15543502-15543521 | MS.gene023488:intron | 45.0% |
| !! | AGGCCTAGGTTGATTATCTG+TGG | - | chr4.3:15542698-15542717 | MS.gene023488:intron | 45.0% |
| !! | CCTAGGTTGATTATCTGTGG+TGG | - | chr4.3:15542701-15542720 | MS.gene023488:intron | 45.0% |
| !! | TGCATTGGCCTTAACTTGCT+TGG | + | chr4.3:15544174-15544193 | None:intergenic | 45.0% |
| !!! | AAGCGTTGGATTTTAGGCCT+AGG | - | chr4.3:15542684-15542703 | MS.gene023488:intron | 45.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+TGG | - | chr4.3:15543331-15543350 | MS.gene023488:intron | 5.0% |
| AAGGCCAATGCAGTTGCCAT+TGG | - | chr4.3:15544182-15544201 | MS.gene023488:intron | 50.0% | |
| ACAAGAGTTTGAGGGGTCCT+AGG | - | chr4.3:15543955-15543974 | MS.gene023488:intron | 50.0% | |
| ACCCACACATTGAGCCATGA+TGG | + | chr4.3:15543403-15543422 | None:intergenic | 50.0% | |
| AGGTGACATGGCCTGTTTCA+AGG | + | chr4.3:15544135-15544154 | None:intergenic | 50.0% | |
| ATGCCGGGTAACCGTTACTA+CGG | - | chr4.3:15542344-15542363 | MS.gene023488:CDS | 50.0% | |
| ATGCGATGAGTTCGATTCCG+CGG | + | chr4.3:15542253-15542272 | None:intergenic | 50.0% | |
| CAAGAGTTTGAGGGGTCCTA+GGG | - | chr4.3:15543956-15543975 | MS.gene023488:intron | 50.0% | |
| CCCACACATTGAGCCATGAT+GGG | + | chr4.3:15543402-15543421 | None:intergenic | 50.0% | |
| CCCATCATGGCTCAATGTGT+GGG | - | chr4.3:15543399-15543418 | MS.gene023488:intron | 50.0% | |
| CCTGTTTCAAGGCAACAGCA+AGG | + | chr4.3:15544124-15544143 | None:intergenic | 50.0% | |
| CGATTAGGTCGTGGATCTCT+GGG | + | chr4.3:15542208-15542227 | None:intergenic | 50.0% | |
| CGCGGTTTGATGTTCTTTGC+AGG | - | chr4.3:15544367-15544386 | MS.gene023488:intron | 50.0% | |
| CGGAATCGAACTCATCGCAT+CGG | - | chr4.3:15542253-15542272 | MS.gene023488:CDS | 50.0% | |
| CGTAAACTGCATTCTCAGGC+TGG | + | chr4.3:15544028-15544047 | None:intergenic | 50.0% | |
| CTAGAGATCCAGAAGGAGCA+TGG | - | chr4.3:15544917-15544936 | MS.gene023488:CDS | 50.0% | |
| CTAGTGTGAGTGTCACAGCA+CGG | + | chr4.3:15544901-15544920 | None:intergenic | 50.0% | |
| GAAAAACGTCGTCAATGCCG+CGG | - | chr4.3:15542233-15542252 | MS.gene023488:CDS | 50.0% | |
| GATTGTGAGGACCACCTTGA+AGG | + | chr4.3:15544088-15544107 | None:intergenic | 50.0% | |
| GCACCAATCTGGTGATTGTG+AGG | + | chr4.3:15544101-15544120 | None:intergenic | 50.0% | |
| GGACCTAAACCACCCAAGAA+GGG | - | chr4.3:15544002-15544021 | MS.gene023488:intron | 50.0% | |
| GGATTGGATCTTCCTTCAGG+TGG | - | chr4.3:15542533-15542552 | MS.gene023488:intron | 50.0% | |
| GGATTTCAACAAGGGCTTGG+TGG | - | chr4.3:15544952-15544971 | MS.gene023488:CDS | 50.0% | |
| GGGCTGGAATGATCTTCTAC+AGG | - | chr4.3:15543976-15543995 | MS.gene023488:intron | 50.0% | |
| GGTCCTCACAATCACCAGAT+TGG | - | chr4.3:15544095-15544114 | MS.gene023488:intron | 50.0% | |
| GTAGTGCTTACCCTAGGGAT+TGG | - | chr4.3:15542723-15542742 | MS.gene023488:intron | 50.0% | |
| GTGTAAGCAGCGAAATTCGC+CGG | + | chr4.3:15542482-15542501 | None:intergenic | 50.0% | |
| TCCCATCATGGCTCAATGTG+TGG | - | chr4.3:15543398-15543417 | MS.gene023488:intron | 50.0% | |
| TCGATTAGGTCGTGGATCTC+TGG | + | chr4.3:15542209-15542228 | None:intergenic | 50.0% | |
| TGAAACAGGCCATGTCACCT+GGG | - | chr4.3:15544135-15544154 | MS.gene023488:intron | 50.0% | |
| TTACCAACTCGTACTCCTCC+TGG | + | chr4.3:15544475-15544494 | None:intergenic | 50.0% | |
| TTGAAACAGGCCATGTCACC+TGG | - | chr4.3:15544134-15544153 | MS.gene023488:intron | 50.0% | |
| TTGGCATATGCCTTGAACCC+AGG | + | chr4.3:15544155-15544174 | None:intergenic | 50.0% | |
| ! | AAATACTCCGAAGGCATGCC+GGG | - | chr4.3:15542329-15542348 | MS.gene023488:CDS | 50.0% |
| ! | AAGCCTCTAGAAGTCATGGC+CGG | + | chr4.3:15544839-15544858 | None:intergenic | 50.0% |
| ! | AAGCTTGAAGAGCGCGTGAA+CGG | + | chr4.3:15542406-15542425 | None:intergenic | 50.0% |
| ! | CAAATACTCCGAAGGCATGC+CGG | - | chr4.3:15542328-15542347 | MS.gene023488:CDS | 50.0% |
| ! | GCAGTTTTCCCTTCCCTTCA+AGG | - | chr4.3:15544071-15544090 | MS.gene023488:intron | 50.0% |
| ! | GGATACAGTCTTGTCACTGG+TGG | - | chr4.3:15544224-15544243 | MS.gene023488:intron | 50.0% |
| ! | GTTTTCCCTTCCCTTCAAGG+TGG | - | chr4.3:15544074-15544093 | MS.gene023488:intron | 50.0% |
| ! | TAGGTTGGAGGAGAAAGCGT+TGG | - | chr4.3:15542670-15542689 | MS.gene023488:intron | 50.0% |
| ! | TCAGCCTTACTCTGGTTCAC+CGG | - | chr4.3:15542460-15542479 | MS.gene023488:intron | 50.0% |
| ! | TGGTGGTAGTGCTTACCCTA+GGG | - | chr4.3:15542718-15542737 | MS.gene023488:intron | 50.0% |
| ! | TTTTGGCGATAGCAGTGCCT+TGG | - | chr4.3:15544447-15544466 | MS.gene023488:CDS | 50.0% |
| !! | CCTTGCTGTTGCCTTGAAAC+AGG | - | chr4.3:15544121-15544140 | MS.gene023488:intron | 50.0% |
| CCACCGTAGTAACGGTTACC+CGG | + | chr4.3:15542350-15542369 | None:intergenic | 55.0% | |
| CTTCGCCCTCTTGGATTGAC+TGG | - | chr4.3:15544275-15544294 | MS.gene023488:intron | 55.0% | |
| GAGGACCACCTTGAAGGGAA+GGG | + | chr4.3:15544082-15544101 | None:intergenic | 55.0% | |
| GGGACCTAAACCACCCAAGA+AGG | - | chr4.3:15544001-15544020 | MS.gene023488:intron | 55.0% | |
| TGAGGACCACCTTGAAGGGA+AGG | + | chr4.3:15544083-15544102 | None:intergenic | 55.0% | |
| TGAGTGTCACAGCACGGTGA+AGG | + | chr4.3:15544895-15544914 | None:intergenic | 55.0% | |
| TGCCTTGAACCCAGGTGACA+TGG | + | chr4.3:15544147-15544166 | None:intergenic | 55.0% | |
| TGGCCCTTCTTGGGTGGTTT+AGG | + | chr4.3:15544008-15544027 | None:intergenic | 55.0% | |
| TTCGCCGGTGAACCAGAGTA+AGG | + | chr4.3:15542467-15542486 | None:intergenic | 55.0% | |
| TTCGCCGTCATCGAAGCTCT+CGG | - | chr4.3:15542290-15542309 | MS.gene023488:CDS | 55.0% | |
| TTGTGGGATCTTCGCCCTCT+TGG | - | chr4.3:15544266-15544285 | MS.gene023488:intron | 55.0% | |
| ! | ATTCTCAGGCTGGCCCTTCT+TGG | + | chr4.3:15544018-15544037 | None:intergenic | 55.0% |
| ! | GGCCATGACTTCTAGAGGCT+TGG | - | chr4.3:15544838-15544857 | MS.gene023488:CDS | 55.0% |
| ! | GTGGTGGTAGTGCTTACCCT+AGG | - | chr4.3:15542717-15542736 | MS.gene023488:intron | 55.0% |
| ! | TTCTCAGGCTGGCCCTTCTT+GGG | + | chr4.3:15544017-15544036 | None:intergenic | 55.0% |
| ! | TTTGTCTGGGGTTCGAACCC+CGG | + | chr4.3:15543360-15543379 | None:intergenic | 55.0% |
| !! | AATGTCGGGGGCACTGGTTA+AGG | + | chr4.3:15543034-15543053 | None:intergenic | 55.0% |
| !! | CAACAGCAAGGGCACCAATC+TGG | + | chr4.3:15544112-15544131 | None:intergenic | 55.0% |
| !! | CAAGGGCTTGGTGGACAACA+AGG | - | chr4.3:15544961-15544980 | MS.gene023488:CDS | 55.0% |
| !! | TAGTGGCCTTGTTGCTGCTC+AGG | - | chr4.3:15542814-15542833 | MS.gene023488:CDS | 55.0% |
| ACGGTTACCCGGCATGCCTT+CGG | + | chr4.3:15542339-15542358 | None:intergenic | 60.0% | |
| AGTTTGAGGGGTCCTAGGGC+TGG | - | chr4.3:15543960-15543979 | MS.gene023488:intron | 60.0% | |
| CCGGGTAACCGTTACTACGG+TGG | - | chr4.3:15542347-15542366 | MS.gene023488:CDS | 60.0% | |
| GATAGCAGTGCCTTGGCTCC+AGG | - | chr4.3:15544454-15544473 | MS.gene023488:CDS | 60.0% | |
| GCTCCGGCCATGACTTCTAG+AGG | - | chr4.3:15544833-15544852 | MS.gene023488:CDS | 60.0% | |
| GCTGCCGAGAGCTTCGATGA+CGG | + | chr4.3:15542297-15542316 | None:intergenic | 60.0% | |
| GGCCATGTCACCTGGGTTCA+AGG | - | chr4.3:15544142-15544161 | MS.gene023488:intron | 60.0% | |
| GTCGTGGATCTCTGGGTCGA+CGG | + | chr4.3:15542201-15542220 | None:intergenic | 60.0% | |
| TCGTACTCCTCCTGGAGCCA+AGG | + | chr4.3:15544467-15544486 | None:intergenic | 60.0% | |
| TCTGGGTCGACGGTTACGAG+TGG | + | chr4.3:15542191-15542210 | None:intergenic | 60.0% | |
| ! | AAGGGAAATGTCGGGGGCAC+TGG | + | chr4.3:15543040-15543059 | None:intergenic | 60.0% |
| ! | GAGAGCTTCGATGACGGCGA+AGG | + | chr4.3:15542291-15542310 | None:intergenic | 60.0% |
| ! | GCTCCAGGAGGAGTACGAGT+TGG | - | chr4.3:15544469-15544488 | MS.gene023488:CDS | 60.0% |
| AGCAGTGCCTTGGCTCCAGG+AGG | - | chr4.3:15544457-15544476 | MS.gene023488:CDS | 65.0% | |
| ! | TCAGGCTGGCCCTTCTTGGG+TGG | + | chr4.3:15544014-15544033 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 15542158 | 15545075 | 15542158 | ID=MS.gene023488 |
| chr4.3 | mRNA | 15542158 | 15545075 | 15542158 | ID=MS.gene023488.t1;Parent=MS.gene023488 |
| chr4.3 | exon | 15544398 | 15545075 | 15544398 | ID=MS.gene023488.t1.exon1;Parent=MS.gene023488.t1 |
| chr4.3 | CDS | 15544398 | 15545075 | 15544398 | ID=cds.MS.gene023488.t1;Parent=MS.gene023488.t1 |
| chr4.3 | exon | 15542937 | 15543327 | 15542937 | ID=MS.gene023488.t1.exon2;Parent=MS.gene023488.t1 |
| chr4.3 | CDS | 15542937 | 15543327 | 15542937 | ID=cds.MS.gene023488.t1;Parent=MS.gene023488.t1 |
| chr4.3 | exon | 15542743 | 15542844 | 15542743 | ID=MS.gene023488.t1.exon3;Parent=MS.gene023488.t1 |
| chr4.3 | CDS | 15542743 | 15542844 | 15542743 | ID=cds.MS.gene023488.t1;Parent=MS.gene023488.t1 |
| chr4.3 | exon | 15542158 | 15542402 | 15542158 | ID=MS.gene023488.t1.exon4;Parent=MS.gene023488.t1 |
| chr4.3 | CDS | 15542158 | 15542402 | 15542158 | ID=cds.MS.gene023488.t1;Parent=MS.gene023488.t1 |
| Gene Sequence |
| Protein sequence |
