Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023498.t1 | XP_024627987.1 | 93.3 | 1047 | 69 | 1 | 1 | 1046 | 1 | 1047 | 4.80E-243 | 851.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023498.t1 | A0A072TT11 | 93.3 | 1047 | 69 | 1 | 1 | 1046 | 1 | 1047 | 3.5e-243 | 851.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene037287 | MS.gene023498 | PPI |
| MS.gene056297 | MS.gene023498 | PPI |
| MS.gene023498 | MS.gene029279 | PPI |
| MS.gene023498 | MS.gene065011 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023498.t1 | MTR_8g081640 | 97.994 | 1047 | 20 | 1 | 1 | 1046 | 1 | 1047 | 0.0 | 2097 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023498.t1 | AT3G23900 | 54.842 | 888 | 294 | 22 | 10 | 814 | 13 | 876 | 0.0 | 610 |
| MS.gene023498.t1 | AT3G23900 | 54.842 | 888 | 294 | 22 | 10 | 814 | 13 | 876 | 0.0 | 610 |
| MS.gene023498.t1 | AT3G23900 | 54.842 | 888 | 294 | 22 | 10 | 814 | 13 | 876 | 0.0 | 610 |
| MS.gene023498.t1 | AT3G23900 | 54.842 | 888 | 294 | 22 | 10 | 814 | 13 | 876 | 0.0 | 608 |
Find 272 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATACTCTTTGAAATTTAT+TGG | 0.135526 | 4.3:-15475508 | None:intergenic |
| GGAATTGTTGCTGGAGCTTC+TGG | 0.190283 | 4.3:+15471902 | MS.gene023498:CDS |
| ATAGTTTGATTAACCATATT+TGG | 0.193294 | 4.3:-15471812 | None:intergenic |
| CTTCAACACATCCTCCTTAT+TGG | 0.197968 | 4.3:-15472386 | None:intergenic |
| CATACTCTTTGAAATTTATT+GGG | 0.228153 | 4.3:-15475507 | None:intergenic |
| TCCTCCTTATTGGCTTTATC+AGG | 0.248991 | 4.3:-15472376 | None:intergenic |
| CCTCCTTCGCTCTCTATGTT+TGG | 0.254582 | 4.3:-15474888 | None:intergenic |
| TGCTGCAATGGCTGCTGCTC+AGG | 0.269914 | 4.3:+15472105 | MS.gene023498:CDS |
| AAGTCCTTCACATTTAAAAT+TGG | 0.273158 | 4.3:-15475649 | None:intergenic |
| CTGCATGAGCTTGAAGGGCT+TGG | 0.292207 | 4.3:-15472141 | None:intergenic |
| CCGCCTTCGATCTCTTTGTT+TGG | 0.306742 | 4.3:-15474642 | None:intergenic |
| AAACAGTCTCGTGCTGATTC+TGG | 0.310088 | 4.3:+15474476 | MS.gene023498:CDS |
| TACATCTTCATATCCAAATA+TGG | 0.312115 | 4.3:+15471799 | MS.gene023498:CDS |
| CCTGGACCGCTTCTTGTGCC+TGG | 0.312415 | 4.3:-15474738 | None:intergenic |
| AATTACTCTGGCTCCGTCTC+AGG | 0.316911 | 4.3:+15471848 | MS.gene023498:CDS |
| GAACAGCTAAAACAACTCTT+TGG | 0.317486 | 4.3:+15472451 | MS.gene023498:CDS |
| GAAGAATTCATAGTTGGTTT+TGG | 0.322972 | 4.3:-15472631 | None:intergenic |
| GAAGCTCCAGCAACAATTCC+TGG | 0.323674 | 4.3:-15471899 | None:intergenic |
| GAACTTCCTCCATGACGTTT+TGG | 0.325835 | 4.3:-15474437 | None:intergenic |
| CCGAGTGTGGCCCCAATTCC+TGG | 0.326309 | 4.3:-15471938 | None:intergenic |
| CTCCTTCGCTCTCTATGTTT+GGG | 0.330251 | 4.3:-15474887 | None:intergenic |
| AGAAGGGATTGTGAAGGATA+TGG | 0.332683 | 4.3:+15470990 | MS.gene023498:CDS |
| CATATAAGTGATGGAGAAAA+TGG | 0.334256 | 4.3:+15475580 | MS.gene023498:CDS |
| GATCAAGGCATGGTGATAAA+AGG | 0.338226 | 4.3:+15475068 | MS.gene023498:CDS |
| TTTCTCCTTCTGTAATTGAT+AGG | 0.338356 | 4.3:-15474179 | None:intergenic |
| ATAGCAGCAGCTGCCTCTTC+AGG | 0.342186 | 4.3:-15472544 | None:intergenic |
| TAAATCTGTGGCAGATTTCA+TGG | 0.344134 | 4.3:-15472779 | None:intergenic |
| TGTGAAAGTGACGCCGGGTT+TGG | 0.344445 | 4.3:+15470948 | MS.gene023498:CDS |
| GACTTTGATCGTGATCGTTC+AGG | 0.346074 | 4.3:-15474149 | None:intergenic |
| TTAACAATCATGAATGCTAA+TGG | 0.350370 | 4.3:+15475670 | MS.gene023498:CDS |
| CAGCTCGGTTAGCAGCCTGC+TGG | 0.359578 | 4.3:-15472753 | None:intergenic |
| GACGATAAGCGTCACTTGTC+TGG | 0.367254 | 4.3:+15475019 | MS.gene023498:CDS |
| TTCGTTCGCGGTGGTGACTA+AGG | 0.370450 | 4.3:+15470882 | MS.gene023498:CDS |
| GAGTTTGGCCGTTGTGAAAC+CGG | 0.372682 | 4.3:+15470615 | MS.gene023498:CDS |
| GGGGCTTTCCCAGGATTGTT+GGG | 0.372714 | 4.3:+15471869 | MS.gene023498:CDS |
| GCTCTTGATCTTTGCTTCTT+CGG | 0.374652 | 4.3:-15470653 | None:intergenic |
| AGGGGCTTTCCCAGGATTGT+TGG | 0.378970 | 4.3:+15471868 | MS.gene023498:CDS |
| ACCATATAATTCCCTCTCTT+AGG | 0.378982 | 4.3:-15471045 | None:intergenic |
| GTTAATGGCTGATCGGAGTT+TGG | 0.386006 | 4.3:+15470600 | None:intergenic |
| AAGTGTACTGCTGCTGGTAC+TGG | 0.388220 | 4.3:+15470829 | MS.gene023498:CDS |
| CTCACCTCCCCGCTATTCTA+AGG | 0.388581 | 4.3:+15474214 | MS.gene023498:CDS |
| CCGCAGTGATGCTTGGCATT+AGG | 0.390665 | 4.3:-15475379 | None:intergenic |
| TAATAGTAATGGAGGGCTGC+TGG | 0.393310 | 4.3:+15471766 | MS.gene023498:CDS |
| TTCACCTGATAAAGCCAATA+AGG | 0.394118 | 4.3:+15472372 | MS.gene023498:CDS |
| TTGTTTGGCCTTCTCATTCA+CGG | 0.394435 | 4.3:-15474627 | None:intergenic |
| GCGTCACTTGTCTGGAAAAT+CGG | 0.397673 | 4.3:+15475027 | MS.gene023498:CDS |
| TTTCTTGATAACCATTCATC+TGG | 0.399085 | 4.3:+15474356 | MS.gene023498:CDS |
| GCATTAAACAACATTGATGT+TGG | 0.400604 | 4.3:+15472568 | MS.gene023498:CDS |
| CATTAAACAACATTGATGTT+GGG | 0.402980 | 4.3:+15472569 | MS.gene023498:CDS |
| GAAGGATCCACCGGCCCAAT+TGG | 0.403869 | 4.3:-15470805 | None:intergenic |
| ATGTTCCCTGCTGTCTCTAT+AGG | 0.404625 | 4.3:-15474300 | None:intergenic |
| CCAGAGTAATTCGGCATGTT+CGG | 0.405903 | 4.3:-15471836 | None:intergenic |
| CATCATTCTAAAGGTAAGTC+TGG | 0.408877 | 4.3:+15475214 | MS.gene023498:CDS |
| TCCGTCTCAGGGGCTTTCCC+AGG | 0.410721 | 4.3:+15471860 | MS.gene023498:CDS |
| GTGAAAGTGACGCCGGGTTT+GGG | 0.411746 | 4.3:+15470949 | MS.gene023498:CDS |
| CACTCCCATCATCATATTGC+TGG | 0.414244 | 4.3:-15475477 | None:intergenic |
| AGCTCGGTTAGCAGCCTGCT+GGG | 0.415072 | 4.3:-15472752 | None:intergenic |
| GCTGCTGGTACTGGAATTGC+CGG | 0.415278 | 4.3:+15470838 | MS.gene023498:CDS |
| GAAGGGATTGTGAAGGATAT+GGG | 0.415545 | 4.3:+15470991 | MS.gene023498:CDS |
| AAAGAGATCGAAGGCGGTCC+AGG | 0.416066 | 4.3:+15474648 | MS.gene023498:CDS |
| ATCATGATACAAAATGTAAC+AGG | 0.416989 | 4.3:+15475170 | MS.gene023498:CDS |
| TGAGAGGAAGGTTTCGGTTG+GGG | 0.418990 | 4.3:+15470912 | MS.gene023498:CDS |
| ATGATTCCAGGAATTGTTGC+TGG | 0.421924 | 4.3:+15471893 | MS.gene023498:CDS |
| GTTGCATAATCAGTGCTTGC+TGG | 0.422061 | 4.3:-15472717 | None:intergenic |
| GGATTGTTGGGAATGATTCC+AGG | 0.422861 | 4.3:+15471881 | MS.gene023498:CDS |
| TGCATGAGCTTGAAGGGCTT+GGG | 0.424739 | 4.3:-15472140 | None:intergenic |
| TGCTAATGAGAGGAAGGTTT+CGG | 0.427065 | 4.3:+15470906 | MS.gene023498:CDS |
| GGAATCATTCCCAACAATCC+TGG | 0.428275 | 4.3:-15471878 | None:intergenic |
| GGCACCATCTGCTGCTGCAA+TGG | 0.429394 | 4.3:+15472093 | MS.gene023498:CDS |
| CCAGGAATTGGGGCCACACT+CGG | 0.431574 | 4.3:+15471938 | MS.gene023498:CDS |
| AATGAGAACACAAAGTTCAA+TGG | 0.432033 | 4.3:+15475709 | MS.gene023498:CDS |
| GTAAGTGAAGAATTCATAGT+TGG | 0.436496 | 4.3:-15472637 | None:intergenic |
| CTGCTTTCATCCACTTTCCG+TGG | 0.437196 | 4.3:-15474959 | None:intergenic |
| GATCTGGCTCATAAGCCAAT+TGG | 0.438077 | 4.3:+15470790 | MS.gene023498:CDS |
| ACGCCGGGTTTGGGTGTTGG+AGG | 0.438171 | 4.3:+15470958 | MS.gene023498:CDS |
| ACTGAGCTGCATGAGCTTGA+AGG | 0.439011 | 4.3:-15472147 | None:intergenic |
| GCCTAAGAGAGGGAATTATA+TGG | 0.439099 | 4.3:+15471044 | MS.gene023498:CDS |
| CTTAGCTGCGACAACTTCAA+TGG | 0.439372 | 4.3:+15472048 | MS.gene023498:CDS |
| CAGATGGTGCCATCGGAGCC+TGG | 0.440698 | 4.3:-15472081 | None:intergenic |
| ATAGAGAGCGAAGGAGGTCC+AGG | 0.440893 | 4.3:+15474894 | MS.gene023498:CDS |
| AGCAGCACAGGCCGTTCCTC+CGG | 0.440925 | 4.3:-15470857 | None:intergenic |
| TCTTCAATTTCAAGTCCATC+AGG | 0.444372 | 4.3:-15472841 | None:intergenic |
| GCAGCCATTGCAGCAGCAGA+TGG | 0.446373 | 4.3:-15472097 | None:intergenic |
| TAACAATCATGAATGCTAAT+GGG | 0.446543 | 4.3:+15475671 | MS.gene023498:CDS |
| ATCTGGCTCATAAGCCAATT+GGG | 0.450226 | 4.3:+15470791 | MS.gene023498:CDS |
| CCTGGACCGCTTCTTATGCC+TGG | 0.450230 | 4.3:-15474984 | None:intergenic |
| CAGGAATTGGGGCCACACTC+GGG | 0.450338 | 4.3:+15471939 | MS.gene023498:CDS |
| GTGACGCCGGGTTTGGGTGT+TGG | 0.451752 | 4.3:+15470955 | MS.gene023498:CDS |
| AATCAAAGCATCGTGATAGA+AGG | 0.452296 | 4.3:+15475254 | MS.gene023498:CDS |
| CTGGACCGCTTCTTGTGCCT+GGG | 0.453758 | 4.3:-15474737 | None:intergenic |
| CTACTTCCTCTGCGATTGCT+TGG | 0.453819 | 4.3:-15474503 | None:intergenic |
| AAATTTGATTCTGGATCTGC+AGG | 0.455572 | 4.3:+15475547 | MS.gene023498:CDS |
| GACTTATACGGTTACTTATG+TGG | 0.456225 | 4.3:+15471020 | MS.gene023498:CDS |
| TGCTTTCATCCACTTTCCGT+GGG | 0.456462 | 4.3:-15474958 | None:intergenic |
| GCGTCCTTTGAATGTTGAAA+TGG | 0.459025 | 4.3:+15472594 | MS.gene023498:CDS |
| GAGACGGAGCCAGAGTAATT+CGG | 0.460989 | 4.3:-15471845 | None:intergenic |
| CGCGAACGAAGAAGCAGCAC+AGG | 0.462761 | 4.3:-15470869 | None:intergenic |
| ATTCTAAGGCTCGTCGGTCC+AGG | 0.469615 | 4.3:+15474228 | MS.gene023498:CDS |
| ATTACTCTGGCTCCGTCTCA+GGG | 0.471675 | 4.3:+15471849 | MS.gene023498:CDS |
| CTGTGCTGCTTCTTCGTTCG+CGG | 0.473848 | 4.3:+15470870 | MS.gene023498:CDS |
| TGAAGAGGCAGCTGCTGCTA+TGG | 0.474903 | 4.3:+15472546 | MS.gene023498:CDS |
| ACAAAATATGACTGCCCAGC+AGG | 0.476081 | 4.3:+15472738 | MS.gene023498:CDS |
| CCAGGCACAAGAAGCGGTCC+AGG | 0.478895 | 4.3:+15474738 | MS.gene023498:CDS |
| ATGAGAGGAAGGTTTCGGTT+GGG | 0.479168 | 4.3:+15470911 | MS.gene023498:CDS |
| CGCCGGGTTTGGGTGTTGGA+GGG | 0.479197 | 4.3:+15470959 | MS.gene023498:CDS |
| ATGGTTAATGTTGAATGTAA+TGG | 0.480135 | 4.3:+15471063 | MS.gene023498:CDS |
| GCGATCATCCCCACGGAAAG+TGG | 0.481867 | 4.3:+15474949 | MS.gene023498:CDS |
| TTCCGATGATTATGAGGATC+TGG | 0.483003 | 4.3:+15470774 | MS.gene023498:CDS |
| TTCTTCTCGAACCAGATGAA+TGG | 0.483259 | 4.3:-15474367 | None:intergenic |
| ATGAGAACACAAAGTTCAAT+GGG | 0.484776 | 4.3:+15475710 | MS.gene023498:CDS |
| AATCACCAGCAATATGATGA+TGG | 0.485644 | 4.3:+15475472 | MS.gene023498:CDS |
| TTGAAGAAAACAGAAGTAGA+AGG | 0.487188 | 4.3:+15474801 | MS.gene023498:CDS |
| CTGAGCTGCATGAGCTTGAA+GGG | 0.487987 | 4.3:-15472146 | None:intergenic |
| GATCGTGATCGTTCAGGAGG+AGG | 0.490864 | 4.3:-15474143 | None:intergenic |
| TCGGCTTGTTTCATCCATAC+CGG | 0.491761 | 4.3:-15470634 | None:intergenic |
| GATCTATTGAAATTAGAGAC+AGG | 0.491859 | 4.3:+15475104 | MS.gene023498:CDS |
| ACAGCAGGGAACATAGTGAT+AGG | 0.493066 | 4.3:+15474309 | MS.gene023498:CDS |
| GGGAATGGACTACCATTGAT+TGG | 0.495869 | 4.3:-15471090 | None:intergenic |
| ATCATCACCGCAGTGATGCT+TGG | 0.497712 | 4.3:-15475386 | None:intergenic |
| TTTGCCATTTCAACATTCAA+AGG | 0.501218 | 4.3:-15472598 | None:intergenic |
| TTTCATACCTCGAATGATGA+TGG | 0.501484 | 4.3:-15474265 | None:intergenic |
| CCTTCCAAGTGTACTGCTGC+TGG | 0.503171 | 4.3:+15470823 | MS.gene023498:CDS |
| CCGAACATGCCGAATTACTC+TGG | 0.503172 | 4.3:+15471836 | MS.gene023498:CDS |
| AAACAACTCTTTGGTTTCTG+TGG | 0.504178 | 4.3:+15472460 | MS.gene023498:CDS |
| CCGACGAGCCTTAGAATAGC+GGG | 0.509473 | 4.3:-15474222 | None:intergenic |
| AATTTCAATAGATCTTGATC+TGG | 0.513798 | 4.3:-15475095 | None:intergenic |
| TTAGCTGCGACAACTTCAAT+GGG | 0.514670 | 4.3:+15472049 | MS.gene023498:CDS |
| AAGTGGATGAAAGCAGATCC+AGG | 0.515014 | 4.3:+15474966 | MS.gene023498:CDS |
| GTTGTAGGTAATAGTAATGG+AGG | 0.515255 | 4.3:+15471758 | MS.gene023498:intron |
| ATCGTGATCGTTCAGGAGGA+GGG | 0.515278 | 4.3:-15474142 | None:intergenic |
| TAGTGATTCCGATGATTATG+AGG | 0.516632 | 4.3:+15470768 | MS.gene023498:CDS |
| AGTAAGAAATTGAATCCTGA+TGG | 0.517061 | 4.3:+15472826 | MS.gene023498:CDS |
| AAGAGACGAAACAGAAATCC+AGG | 0.517629 | 4.3:+15472866 | MS.gene023498:CDS |
| GTTGTTGTAGGTAATAGTAA+TGG | 0.518220 | 4.3:+15471755 | MS.gene023498:intron |
| ATCATCATTCGAGGTATGAA+AGG | 0.518897 | 4.3:+15474267 | MS.gene023498:CDS |
| CATTGAAGTTGTCGCAGCTA+AGG | 0.519381 | 4.3:-15472047 | None:intergenic |
| GAATCATTCCCAACAATCCT+GGG | 0.523841 | 4.3:-15471877 | None:intergenic |
| CCAGGCATAAGAAGCGGTCC+AGG | 0.525203 | 4.3:+15474984 | MS.gene023498:CDS |
| TTCAATGGGAACACTTAGCC+AGG | 0.528018 | 4.3:+15472063 | MS.gene023498:CDS |
| CCAATCTTCTCCAAGAAAAG+TGG | 0.528504 | 4.3:+15474703 | MS.gene023498:CDS |
| CTGGAATTGCATCTGTTGCA+TGG | 0.529280 | 4.3:-15472698 | None:intergenic |
| AGGGCTGATGTCAGAGAGGA+TGG | 0.529674 | 4.3:+15475124 | MS.gene023498:CDS |
| AGGCTTCTCGCCTACAGATA+CGG | 0.530228 | 4.3:-15474918 | None:intergenic |
| AGTACCAGCAGCAGTACACT+TGG | 0.531477 | 4.3:-15470827 | None:intergenic |
| TCTTTGAAATTTATTGGGGA+CGG | 0.532753 | 4.3:-15475502 | None:intergenic |
| GACCCTCCAACACCCAAACC+CGG | 0.533788 | 4.3:-15470961 | None:intergenic |
| GAATGATGATGGAACCTCAA+TGG | 0.535092 | 4.3:-15474254 | None:intergenic |
| GAAGGGAAGCATCATTCTAA+AGG | 0.536686 | 4.3:+15475205 | MS.gene023498:CDS |
| AACAGGTCAGAGTCTGATGA+AGG | 0.537294 | 4.3:+15475187 | MS.gene023498:CDS |
| GGAGGTCCTATAGAGACAGC+AGG | 0.537432 | 4.3:+15474294 | MS.gene023498:CDS |
| CTTAAAAGTTGCTTCAAAAG+CGG | 0.537866 | 4.3:-15470704 | None:intergenic |
| CTGTGGATGAGAAGCCTCAC+AGG | 0.537892 | 4.3:+15474678 | MS.gene023498:CDS |
| ATTAAACAACATTGATGTTG+GGG | 0.539865 | 4.3:+15472570 | MS.gene023498:CDS |
| GGCTCATAAGCCAATTGGGC+CGG | 0.540644 | 4.3:+15470795 | MS.gene023498:CDS |
| AGCTGTTCCACAGTGAGAAG+TGG | 0.540821 | 4.3:-15472436 | None:intergenic |
| AGAATAGCGGGGAGGTGAGT+AGG | 0.541535 | 4.3:-15474210 | None:intergenic |
| CAGATTTCATGGTTGCAGCT+CGG | 0.542176 | 4.3:-15472768 | None:intergenic |
| AAGGGATTGTGAAGGATATG+GGG | 0.542183 | 4.3:+15470992 | MS.gene023498:CDS |
| AGAATACTCAAAACCTGAAG+AGG | 0.542791 | 4.3:+15472531 | MS.gene023498:CDS |
| GGGAACATAGTGATAGGTAC+AGG | 0.544168 | 4.3:+15474315 | MS.gene023498:CDS |
| AGAACAGAAGTAGAAGATCA+AGG | 0.544341 | 4.3:+15475053 | MS.gene023498:CDS |
| AATAGTAATGGAGGGCTGCT+GGG | 0.545362 | 4.3:+15471767 | MS.gene023498:CDS |
| TGAGGTTCCATCATCATTCG+AGG | 0.548966 | 4.3:+15474258 | MS.gene023498:CDS |
| GGAGAAAATGGTACAAGTGA+AGG | 0.550222 | 4.3:+15475592 | MS.gene023498:CDS |
| ATTCGAGGTATGAAAGGGAA+TGG | 0.552872 | 4.3:+15474273 | MS.gene023498:CDS |
| CAGTCAGCAAAAGATTCTGC+TGG | 0.553499 | 4.3:+15472166 | MS.gene023498:CDS |
| GCAGCAGCAGATGGTGCCAT+CGG | 0.554165 | 4.3:-15472088 | None:intergenic |
| GATAAGCACCATATAAGTGA+TGG | 0.555371 | 4.3:+15475571 | MS.gene023498:CDS |
| CCCGCTATTCTAAGGCTCGT+CGG | 0.558077 | 4.3:+15474222 | MS.gene023498:CDS |
| GCAGTCATTAGCAGATTATG+AGG | 0.559262 | 4.3:-15472025 | None:intergenic |
| ATACTCTTTGAAATTTATTG+GGG | 0.560166 | 4.3:-15475506 | None:intergenic |
| TCATTAGCAGATTATGAGGT+GGG | 0.560211 | 4.3:-15472021 | None:intergenic |
| ATCACCAGCAATATGATGAT+GGG | 0.560244 | 4.3:+15475473 | MS.gene023498:CDS |
| AACACTTAGCCAGGCTCCGA+TGG | 0.561066 | 4.3:+15472072 | MS.gene023498:CDS |
| TCATCATTCGAGGTATGAAA+GGG | 0.562014 | 4.3:+15474268 | MS.gene023498:CDS |
| GGAGGAAGTTCATCTTATAG+AGG | 0.563632 | 4.3:+15474449 | MS.gene023498:CDS |
| CAAGCAATCGCAGAGGAAGT+AGG | 0.566816 | 4.3:+15474504 | MS.gene023498:CDS |
| ATCGTGATAGAAGGCGTTCT+AGG | 0.567605 | 4.3:+15475263 | MS.gene023498:CDS |
| GATCGTTCAGGAGGAGGGGA+AGG | 0.569318 | 4.3:-15474137 | None:intergenic |
| TGGCCGTTGTGAAACCGGTA+TGG | 0.569796 | 4.3:+15470620 | MS.gene023498:CDS |
| GTTGGAGGGTCTGATCAAGA+AGG | 0.569827 | 4.3:+15470973 | MS.gene023498:CDS |
| GAGAGGAAGGTTTCGGTTGG+GGG | 0.570539 | 4.3:+15470913 | MS.gene023498:CDS |
| AATGAGAGGAAGGTTTCGGT+TGG | 0.571275 | 4.3:+15470910 | MS.gene023498:CDS |
| AAAAGAAAGCAAGAAACAGA+AGG | 0.572352 | 4.3:+15474546 | MS.gene023498:CDS |
| GTCGGTCCAGGTCTCCATTG+AGG | 0.573181 | 4.3:+15474240 | MS.gene023498:CDS |
| AGCCAGATCCTCATAATCAT+CGG | 0.573224 | 4.3:-15470776 | None:intergenic |
| ATTGTTGCTGGAGCTTCTGG+AGG | 0.575180 | 4.3:+15471905 | MS.gene023498:CDS |
| TGTAATGGCAGACCAATCAA+TGG | 0.577273 | 4.3:+15471078 | MS.gene023498:CDS |
| AGGAATTGGGGCCACACTCG+GGG | 0.581244 | 4.3:+15471940 | MS.gene023498:CDS |
| TACTGGAATTGCCGGAGGAA+CGG | 0.581920 | 4.3:+15470846 | MS.gene023498:CDS |
| GCGGTCCAGGTCAGTATCTG+TGG | 0.583866 | 4.3:+15474661 | MS.gene023498:CDS |
| CTCGCCTACAGATACGGACC+TGG | 0.583899 | 4.3:-15474912 | None:intergenic |
| ACAGCTTGCTGCATCATCAA+AGG | 0.584834 | 4.3:-15472673 | None:intergenic |
| CTCATCCACAGATACTGACC+TGG | 0.586092 | 4.3:-15474666 | None:intergenic |
| TGTTAGGGTTAATGGCTGAT+CGG | 0.586530 | 4.3:+15470593 | None:intergenic |
| ATATTTGGATATGAAGATGT+AGG | 0.587422 | 4.3:-15471797 | None:intergenic |
| TAAGGATGCTAATGAGAGGA+AGG | 0.587941 | 4.3:+15470900 | MS.gene023498:CDS |
| GCAGACCCAGGCACAAGAAG+CGG | 0.589179 | 4.3:+15474732 | MS.gene023498:CDS |
| TGAAGAAACCGTGAATGAGA+AGG | 0.593683 | 4.3:+15474619 | MS.gene023498:CDS |
| CCTGTTTCTCCAAAACGTCA+TGG | 0.594032 | 4.3:+15474428 | MS.gene023498:CDS |
| ATTACTGTGAAAGTGACGCC+GGG | 0.596417 | 4.3:+15470943 | MS.gene023498:CDS |
| CAAGAAACAGAAGGCGCTCG+AGG | 0.597152 | 4.3:+15474555 | MS.gene023498:CDS |
| AATGGGTGGACTGAAAATGC+AGG | 0.598942 | 4.3:+15475727 | MS.gene023498:CDS |
| GTACACTTGGAAGGATCCAC+CGG | 0.599231 | 4.3:-15470814 | None:intergenic |
| CTGTAGGCGAGAAGCCTCAG+AGG | 0.599296 | 4.3:+15474924 | MS.gene023498:CDS |
| GAAGTTCATCTTATAGAGGA+AGG | 0.599395 | 4.3:+15474453 | MS.gene023498:CDS |
| ACGACAAACTTCCCCGAGTG+TGG | 0.600620 | 4.3:-15471951 | None:intergenic |
| TCCTGGGAAAGCCCCTGAGA+CGG | 0.600798 | 4.3:-15471861 | None:intergenic |
| TGCTGCTTCTTCGTTCGCGG+TGG | 0.601729 | 4.3:+15470873 | MS.gene023498:CDS |
| ACTTATGTGGTGCCTAAGAG+AGG | 0.605376 | 4.3:+15471033 | MS.gene023498:CDS |
| AATCTCCTATCAATTACAGA+AGG | 0.605768 | 4.3:+15474174 | MS.gene023498:CDS |
| TGCGTTGAAGAAGTCAGAAG+TGG | 0.605770 | 4.3:+15475864 | MS.gene023498:CDS |
| AGGTCCAGGTCCGTATCTGT+AGG | 0.606212 | 4.3:+15474908 | MS.gene023498:CDS |
| AGGAAGTAGGTCTTCTCCGA+AGG | 0.606633 | 4.3:+15474517 | MS.gene023498:CDS |
| GCGGTCCAGGTCAAAATCTG+TGG | 0.611258 | 4.3:+15474751 | MS.gene023498:CDS |
| GCGGTCCAGGTCAAAATCTG+TGG | 0.611258 | 4.3:+15474997 | MS.gene023498:CDS |
| ATGGAACCTCAATGGAGACC+TGG | 0.612564 | 4.3:-15474246 | None:intergenic |
| GTTCGAGAAGAAACAGAAGT+AGG | 0.613588 | 4.3:+15474378 | MS.gene023498:CDS |
| GGAGAAGATTGGCTCCTGTG+AGG | 0.614890 | 4.3:-15474692 | None:intergenic |
| GGAGTGTGAGTCCTCATGCA+AGG | 0.616550 | 4.3:+15474399 | MS.gene023498:CDS |
| GGGGATGATCGCCTCCTCTG+AGG | 0.618729 | 4.3:-15474938 | None:intergenic |
| TTGGAGGGTCTGATCAAGAA+GGG | 0.624037 | 4.3:+15470974 | MS.gene023498:CDS |
| TTGTAGGTAATAGTAATGGA+GGG | 0.626030 | 4.3:+15471759 | MS.gene023498:intron |
| GTCATTAGCAGATTATGAGG+TGG | 0.626071 | 4.3:-15472022 | None:intergenic |
| TCATAAGCCAATTGGGCCGG+TGG | 0.630809 | 4.3:+15470798 | MS.gene023498:CDS |
| AGGGATTGTGAAGGATATGG+GGG | 0.631034 | 4.3:+15470993 | MS.gene023498:CDS |
| TAAACAACATTGATGTTGGG+GGG | 0.633394 | 4.3:+15472572 | MS.gene023498:CDS |
| CCAAACATAGAGAGCGAAGG+AGG | 0.634567 | 4.3:+15474888 | MS.gene023498:CDS |
| ATTTAAAATTGGTTCCTGTG+TGG | 0.635016 | 4.3:-15475638 | None:intergenic |
| CCAGCAGCAGTACACTTGGA+AGG | 0.635702 | 4.3:-15470823 | None:intergenic |
| GATTACTGTGAAAGTGACGC+CGG | 0.635899 | 4.3:+15470942 | MS.gene023498:CDS |
| TCGAGCTGCAGCTAAATCTG+TGG | 0.636021 | 4.3:-15472791 | None:intergenic |
| GCAGGAGCTGATGATAACTC+AGG | 0.636196 | 4.3:+15475745 | MS.gene023498:CDS |
| TTTGATCGTGATCGTTCAGG+AGG | 0.636780 | 4.3:-15474146 | None:intergenic |
| ATCTATTGAAATTAGAGACA+GGG | 0.638393 | 4.3:+15475105 | MS.gene023498:CDS |
| CTTATGTGGTGCCTAAGAGA+GGG | 0.638544 | 4.3:+15471034 | MS.gene023498:CDS |
| GCGTTGAAGAAGTCAGAAGT+GGG | 0.640260 | 4.3:+15475865 | MS.gene023498:CDS |
| AGGCCAAACAAAGAGATCGA+AGG | 0.640587 | 4.3:+15474639 | MS.gene023498:CDS |
| TTTGTCGTGACTACCTGAGT+GGG | 0.640672 | 4.3:+15471966 | MS.gene023498:CDS |
| TGACTAAGGATGCTAATGAG+AGG | 0.640868 | 4.3:+15470896 | MS.gene023498:CDS |
| AAGTGGATGAAAGCAGACCC+AGG | 0.641708 | 4.3:+15474720 | MS.gene023498:CDS |
| ACATCTTGAAAATGCCACAC+AGG | 0.642851 | 4.3:+15475624 | MS.gene023498:CDS |
| ACAGGGGATCTCCTTGCATG+AGG | 0.644209 | 4.3:-15474410 | None:intergenic |
| CATCCATACCGGTTTCACAA+CGG | 0.645197 | 4.3:-15470623 | None:intergenic |
| TAGGCGAGAAGCCTCAGAGG+AGG | 0.647735 | 4.3:+15474927 | MS.gene023498:CDS |
| TTAAACAACATTGATGTTGG+GGG | 0.649620 | 4.3:+15472571 | MS.gene023498:CDS |
| AGAAGCAAAGATCAAGAGCG+AGG | 0.649784 | 4.3:+15470657 | MS.gene023498:CDS |
| TACCCAAACATAGAGAGCGA+AGG | 0.651494 | 4.3:+15474885 | MS.gene023498:CDS |
| ACAGGTCAGAGTCTGATGAA+GGG | 0.651909 | 4.3:+15475188 | MS.gene023498:CDS |
| GCAGATCCAGGCATAAGAAG+CGG | 0.653802 | 4.3:+15474978 | MS.gene023498:CDS |
| GTTTGTCGTGACTACCTGAG+TGG | 0.655680 | 4.3:+15471965 | MS.gene023498:CDS |
| ACCTGATAAAGCCAATAAGG+AGG | 0.658044 | 4.3:+15472375 | MS.gene023498:CDS |
| AGAAGTAGAAGATCAAGGCA+TGG | 0.658787 | 4.3:+15475058 | MS.gene023498:CDS |
| TGATCAAGAAGGGATTGTGA+AGG | 0.659429 | 4.3:+15470984 | MS.gene023498:CDS |
| TTACTCTGGCTCCGTCTCAG+GGG | 0.663635 | 4.3:+15471850 | MS.gene023498:CDS |
| AGACAGGGCTGATGTCAGAG+AGG | 0.669330 | 4.3:+15475120 | MS.gene023498:CDS |
| TCGTGATCGTTCAGGAGGAG+GGG | 0.671650 | 4.3:-15474141 | None:intergenic |
| GAGGTCCTATAGAGACAGCA+GGG | 0.673481 | 4.3:+15474295 | MS.gene023498:CDS |
| AGAACACAAAGTTCAATGGG+TGG | 0.673621 | 4.3:+15475713 | MS.gene023498:CDS |
| CGAGGTATGAAAGGGAATGG+AGG | 0.675207 | 4.3:+15474276 | MS.gene023498:CDS |
| GCTTTCATCCACTTTCCGTG+GGG | 0.677032 | 4.3:-15474957 | None:intergenic |
| GCTGGTACTGGAATTGCCGG+AGG | 0.679997 | 4.3:+15470841 | MS.gene023498:CDS |
| ACCGACGAGCCTTAGAATAG+CGG | 0.681746 | 4.3:-15474223 | None:intergenic |
| AGAGGAGGCGATCATCCCCA+CGG | 0.682000 | 4.3:+15474942 | MS.gene023498:CDS |
| CCAAACAAAGAGATCGAAGG+CGG | 0.697507 | 4.3:+15474642 | MS.gene023498:CDS |
| CGACGAGCCTTAGAATAGCG+GGG | 0.699768 | 4.3:-15474221 | None:intergenic |
| GAAAGTAAGCATGACAAACG+AGG | 0.701893 | 4.3:+15475298 | MS.gene023498:CDS |
| TCTTAGTCCACTTCTCACTG+TGG | 0.718078 | 4.3:+15472429 | MS.gene023498:CDS |
| GTTTCTCCAAAACGTCATGG+AGG | 0.739515 | 4.3:+15474431 | MS.gene023498:CDS |
| GGTTCTCCAAGCAATCGCAG+AGG | 0.747996 | 4.3:+15474497 | MS.gene023498:CDS |
| CCTAATGCCAAGCATCACTG+CGG | 0.749592 | 4.3:+15475379 | MS.gene023498:CDS |
| CGAGCCTTAGAATAGCGGGG+AGG | 0.768841 | 4.3:-15474218 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATATTAATACAATGA+TGG | + | chr4.3:15473586-15473605 | MS.gene023498:intron | 10.0% |
| !! | ATTTATTATTCTATAGTATC+TGG | - | chr4.3:15473658-15473677 | None:intergenic | 15.0% |
| !!! | AAAATAAAGTATTTCTCTTA+AGG | - | chr4.3:15473525-15473544 | None:intergenic | 15.0% |
| !!! | GTTTTATTTTAGATAAACTA+TGG | + | chr4.3:15474001-15474020 | MS.gene023498:intron | 15.0% |
| !!! | TAATTTTTGTTTTATGTTGA+TGG | + | chr4.3:15472206-15472225 | MS.gene023498:intron | 15.0% |
| !! | AAACCAACTTATACATATAA+AGG | - | chr4.3:15471462-15471481 | None:intergenic | 20.0% |
| !! | AAACTATCCCTATAAAATAT+TGG | + | chr4.3:15473018-15473037 | MS.gene023498:intron | 20.0% |
| !! | AGATGTAATTAATATTGCAT+TGG | + | chr4.3:15473115-15473134 | MS.gene023498:intron | 20.0% |
| !! | ATAGTTTGATTAACCATATT+TGG | - | chr4.3:15471815-15471834 | None:intergenic | 20.0% |
| !! | ATTGACATTAATCATGTAAA+AGG | + | chr4.3:15475791-15475810 | MS.gene023498:intron | 20.0% |
| !! | CTTAAAAAGCAAAACAATTA+GGG | - | chr4.3:15473426-15473445 | None:intergenic | 20.0% |
| !! | GAAAAAACAAAATTTGATTC+TGG | + | chr4.3:15475538-15475557 | MS.gene023498:CDS | 20.0% |
| !! | TATAAAAAAATTCAGAGTAG+CGG | + | chr4.3:15471369-15471388 | MS.gene023498:intron | 20.0% |
| !! | TCTTAAAAAGCAAAACAATT+AGG | - | chr4.3:15473427-15473446 | None:intergenic | 20.0% |
| !! | TTCAAAATGAATATCGTTTA+AGG | + | chr4.3:15472936-15472955 | MS.gene023498:intron | 20.0% |
| !! | TTGTTACTCTATTTAGATTT+AGG | - | chr4.3:15471524-15471543 | None:intergenic | 20.0% |
| !!! | AAAAGACACCAATATTTTAT+AGG | - | chr4.3:15473029-15473048 | None:intergenic | 20.0% |
| !!! | AAACGATATTCATTTTGAAA+CGG | - | chr4.3:15472935-15472954 | None:intergenic | 20.0% |
| !!! | AAAGACACCAATATTTTATA+GGG | - | chr4.3:15473028-15473047 | None:intergenic | 20.0% |
| !!! | AATAATTTTGCTAGTTACTA+AGG | - | chr4.3:15473821-15473840 | None:intergenic | 20.0% |
| !!! | AATATTTTATAGGGATAGTT+TGG | - | chr4.3:15473019-15473038 | None:intergenic | 20.0% |
| !!! | ATACTCTTTGAAATTTATTG+GGG | - | chr4.3:15475509-15475528 | None:intergenic | 20.0% |
| !!! | CAAAGTAAAAGTACTATTTT+GGG | + | chr4.3:15473064-15473083 | MS.gene023498:intron | 20.0% |
| !!! | CATACTCTTTGAAATTTATT+GGG | - | chr4.3:15475510-15475529 | None:intergenic | 20.0% |
| !!! | GTAACTAGCAAAATTATTTT+AGG | + | chr4.3:15473823-15473842 | MS.gene023498:intron | 20.0% |
| !!! | TCATACTCTTTGAAATTTAT+TGG | - | chr4.3:15475511-15475530 | None:intergenic | 20.0% |
| !!! | TTCTGATTTTGATTTAGATA+AGG | - | chr4.3:15475452-15475471 | None:intergenic | 20.0% |
| !!! | TTTTGTTTATTCTTATGAGT+AGG | + | chr4.3:15471483-15471502 | MS.gene023498:intron | 20.0% |
| ! | AATTTCAATAGATCTTGATC+TGG | - | chr4.3:15475098-15475117 | None:intergenic | 25.0% |
| ! | AGAATAAATAAGCTGAGATT+TGG | - | chr4.3:15475827-15475846 | None:intergenic | 25.0% |
| ! | AGATTATTGAGCCAAAAAAA+CGG | - | chr4.3:15471704-15471723 | None:intergenic | 25.0% |
| ! | ATATTTGGATATGAAGATGT+AGG | - | chr4.3:15471800-15471819 | None:intergenic | 25.0% |
| ! | ATCATGATACAAAATGTAAC+AGG | + | chr4.3:15475170-15475189 | MS.gene023498:CDS | 25.0% |
| ! | ATCTATTGAAATTAGAGACA+GGG | + | chr4.3:15475105-15475124 | MS.gene023498:CDS | 25.0% |
| ! | ATGGTTAATGTTGAATGTAA+TGG | + | chr4.3:15471063-15471082 | MS.gene023498:CDS | 25.0% |
| ! | ATTAAACAACATTGATGTTG+GGG | + | chr4.3:15472570-15472589 | MS.gene023498:CDS | 25.0% |
| ! | ATTCCTAAAATTCATATGCA+GGG | - | chr4.3:15473291-15473310 | None:intergenic | 25.0% |
| ! | CATTAAACAACATTGATGTT+GGG | + | chr4.3:15472569-15472588 | MS.gene023498:CDS | 25.0% |
| ! | CTTATTTATTCTTTGATGCA+GGG | + | chr4.3:15475835-15475854 | MS.gene023498:intron | 25.0% |
| ! | TAACAATCATGAATGCTAAT+GGG | + | chr4.3:15475671-15475690 | MS.gene023498:CDS | 25.0% |
| ! | TACAATAAACATTTAAGCAG+AGG | - | chr4.3:15471160-15471179 | None:intergenic | 25.0% |
| ! | TACATCTTCATATCCAAATA+TGG | + | chr4.3:15471799-15471818 | MS.gene023498:CDS | 25.0% |
| ! | TCTCCTTTATATGTATAAGT+TGG | + | chr4.3:15471456-15471475 | MS.gene023498:intron | 25.0% |
| ! | TTAACAATCATGAATGCTAA+TGG | + | chr4.3:15475670-15475689 | MS.gene023498:CDS | 25.0% |
| ! | TTTCTTATGTGTGAACAAAA+AGG | + | chr4.3:15473749-15473768 | MS.gene023498:intron | 25.0% |
| !! | AAAGAAAGTTTCCTTGATTT+TGG | + | chr4.3:15471557-15471576 | MS.gene023498:intron | 25.0% |
| !! | AAGTCCTTCACATTTAAAAT+TGG | - | chr4.3:15475652-15475671 | None:intergenic | 25.0% |
| !! | CTCATTTTCATTCTTGATTT+AGG | + | chr4.3:15471605-15471624 | MS.gene023498:intron | 25.0% |
| !! | TATTTTATAAGCACATGATG+AGG | + | chr4.3:15473539-15473558 | MS.gene023498:intron | 25.0% |
| !!! | GCAAAGTAAAAGTACTATTT+TGG | + | chr4.3:15473063-15473082 | MS.gene023498:intron | 25.0% |
| !!! | GGAAACTTTCTTTTTAACTT+TGG | - | chr4.3:15471550-15471569 | None:intergenic | 25.0% |
| AAAAGAAAGCAAGAAACAGA+AGG | + | chr4.3:15474546-15474565 | MS.gene023498:CDS | 30.0% | |
| AAGGAGAAACTAATAAGAAC+TGG | - | chr4.3:15471443-15471462 | None:intergenic | 30.0% | |
| AATCTCCTATCAATTACAGA+AGG | + | chr4.3:15474174-15474193 | MS.gene023498:CDS | 30.0% | |
| AATGAGAACACAAAGTTCAA+TGG | + | chr4.3:15475709-15475728 | MS.gene023498:CDS | 30.0% | |
| AGTAAGAAATTGAATCCTGA+TGG | + | chr4.3:15472826-15472845 | MS.gene023498:CDS | 30.0% | |
| ATGAGAACACAAAGTTCAAT+GGG | + | chr4.3:15475710-15475729 | MS.gene023498:CDS | 30.0% | |
| CTTAAAAGTTGCTTCAAAAG+CGG | - | chr4.3:15470707-15470726 | None:intergenic | 30.0% | |
| GATCTATTGAAATTAGAGAC+AGG | + | chr4.3:15475104-15475123 | MS.gene023498:CDS | 30.0% | |
| GATTCCTAAAATTCATATGC+AGG | - | chr4.3:15473292-15473311 | None:intergenic | 30.0% | |
| GCATTAAACAACATTGATGT+TGG | + | chr4.3:15472568-15472587 | MS.gene023498:CDS | 30.0% | |
| GCTTATTTATTCTTTGATGC+AGG | + | chr4.3:15475834-15475853 | MS.gene023498:intron | 30.0% | |
| GTAAGTGAAGAATTCATAGT+TGG | - | chr4.3:15472640-15472659 | None:intergenic | 30.0% | |
| GTTGTTGTAGGTAATAGTAA+TGG | + | chr4.3:15471755-15471774 | MS.gene023498:intron | 30.0% | |
| GTTTATTCTTATGAGTAGGA+AGG | + | chr4.3:15471487-15471506 | MS.gene023498:intron | 30.0% | |
| TTAAACAACATTGATGTTGG+GGG | + | chr4.3:15472571-15472590 | MS.gene023498:CDS | 30.0% | |
| TTACCTACAACAACAAATCA+AGG | - | chr4.3:15471749-15471768 | None:intergenic | 30.0% | |
| TTGAAGAAAACAGAAGTAGA+AGG | + | chr4.3:15474801-15474820 | MS.gene023498:CDS | 30.0% | |
| TTTCTCCTTCTGTAATTGAT+AGG | - | chr4.3:15474182-15474201 | None:intergenic | 30.0% | |
| TTTGTGTATGTAGAAGATGA+AGG | + | chr4.3:15473910-15473929 | MS.gene023498:intron | 30.0% | |
| ! | ATTCTTGATTTAGGTTATGC+TGG | + | chr4.3:15471614-15471633 | MS.gene023498:intron | 30.0% |
| ! | ATTTAAAATTGGTTCCTGTG+TGG | - | chr4.3:15475641-15475660 | None:intergenic | 30.0% |
| ! | ATTTTGAACACACAAGATTC+AGG | + | chr4.3:15475347-15475366 | MS.gene023498:CDS | 30.0% |
| ! | CATATAAGTGATGGAGAAAA+TGG | + | chr4.3:15475580-15475599 | MS.gene023498:CDS | 30.0% |
| ! | CATTTTCTCCATCACTTATA+TGG | - | chr4.3:15475582-15475601 | None:intergenic | 30.0% |
| ! | GGAACCAATTTTAAATGTGA+AGG | + | chr4.3:15475645-15475664 | MS.gene023498:CDS | 30.0% |
| ! | GTTTCCTTGATTTTGGATAA+CGG | + | chr4.3:15471564-15471583 | MS.gene023498:intron | 30.0% |
| ! | TTGTAGGTAATAGTAATGGA+GGG | + | chr4.3:15471759-15471778 | MS.gene023498:intron | 30.0% |
| ! | TTTCCTTGATTTTGGATAAC+GGG | + | chr4.3:15471565-15471584 | MS.gene023498:intron | 30.0% |
| ! | TTTCTTGATAACCATTCATC+TGG | + | chr4.3:15474356-15474375 | MS.gene023498:CDS | 30.0% |
| ! | TTTGCCATTTCAACATTCAA+AGG | - | chr4.3:15472601-15472620 | None:intergenic | 30.0% |
| !! | ATTCCTTGATTTGTTGTTGT+AGG | + | chr4.3:15471743-15471762 | MS.gene023498:intron | 30.0% |
| !! | ATTTTGGGAGTAGTGTATAT+AGG | + | chr4.3:15473079-15473098 | MS.gene023498:intron | 30.0% |
| !! | GAAGAATTCATAGTTGGTTT+TGG | - | chr4.3:15472634-15472653 | None:intergenic | 30.0% |
| !! | TCTTTGAAATTTATTGGGGA+CGG | - | chr4.3:15475505-15475524 | None:intergenic | 30.0% |
| !! | TTTTGGGAGTAGTGTATATA+GGG | + | chr4.3:15473080-15473099 | MS.gene023498:intron | 30.0% |
| !!! | ACATTGCCTTTTGTTTTCAA+AGG | + | chr4.3:15474075-15474094 | MS.gene023498:intron | 30.0% |
| !!! | GATATTCATTTTGAAACGGA+GGG | - | chr4.3:15472931-15472950 | None:intergenic | 30.0% |
| !!! | GCTTTTGAAGCAACTTTTAA+GGG | + | chr4.3:15470706-15470725 | MS.gene023498:CDS | 30.0% |
| !!! | TTTTGGCTCAATAATCTCTA+TGG | + | chr4.3:15471707-15471726 | MS.gene023498:intron | 30.0% |
| AAATTTGATTCTGGATCTGC+AGG | + | chr4.3:15475547-15475566 | MS.gene023498:CDS | 35.0% | |
| AACCAACAAAATATCACACC+TGG | - | chr4.3:15472887-15472906 | None:intergenic | 35.0% | |
| AATCACCAGCAATATGATGA+TGG | + | chr4.3:15475472-15475491 | MS.gene023498:CDS | 35.0% | |
| AATCCCGTTATCCAAAATCA+AGG | - | chr4.3:15471571-15471590 | None:intergenic | 35.0% | |
| ACCATATAATTCCCTCTCTT+AGG | - | chr4.3:15471048-15471067 | None:intergenic | 35.0% | |
| AGAACAGAAGTAGAAGATCA+AGG | + | chr4.3:15475053-15475072 | MS.gene023498:CDS | 35.0% | |
| AGAAGGAAGTGACATATTGT+TGG | + | chr4.3:15473944-15473963 | MS.gene023498:intron | 35.0% | |
| AGAATACTCAAAACCTGAAG+AGG | + | chr4.3:15472531-15472550 | MS.gene023498:CDS | 35.0% | |
| AGTCAAAAGAATCACATTGC+AGG | - | chr4.3:15471203-15471222 | None:intergenic | 35.0% | |
| ATCACCAGCAATATGATGAT+GGG | + | chr4.3:15475473-15475492 | MS.gene023498:CDS | 35.0% | |
| ATCATCATTCGAGGTATGAA+AGG | + | chr4.3:15474267-15474286 | MS.gene023498:CDS | 35.0% | |
| ATTTATTCTTTGATGCAGGG+TGG | + | chr4.3:15475838-15475857 | MS.gene023498:intron | 35.0% | |
| GAAAAACATATCAAGCAACG+TGG | - | chr4.3:15473733-15473752 | None:intergenic | 35.0% | |
| GAAACAGTTAACCGTAGTTA+AGG | - | chr4.3:15471316-15471335 | None:intergenic | 35.0% | |
| GAACAGCTAAAACAACTCTT+TGG | + | chr4.3:15472451-15472470 | MS.gene023498:CDS | 35.0% | |
| GAAGTTCATCTTATAGAGGA+AGG | + | chr4.3:15474453-15474472 | MS.gene023498:CDS | 35.0% | |
| GACTTATACGGTTACTTATG+TGG | + | chr4.3:15471020-15471039 | MS.gene023498:CDS | 35.0% | |
| GATAAGCACCATATAAGTGA+TGG | + | chr4.3:15475571-15475590 | MS.gene023498:CDS | 35.0% | |
| GTTGTAGGTAATAGTAATGG+AGG | + | chr4.3:15471758-15471777 | MS.gene023498:intron | 35.0% | |
| TAAACAACATTGATGTTGGG+GGG | + | chr4.3:15472572-15472591 | MS.gene023498:CDS | 35.0% | |
| TAAATCTGTGGCAGATTTCA+TGG | - | chr4.3:15472782-15472801 | None:intergenic | 35.0% | |
| TAATGTCAATGTTCAGCAGT+AGG | - | chr4.3:15475781-15475800 | None:intergenic | 35.0% | |
| TAGTGATTCCGATGATTATG+AGG | + | chr4.3:15470768-15470787 | MS.gene023498:CDS | 35.0% | |
| TCATCATTCGAGGTATGAAA+GGG | + | chr4.3:15474268-15474287 | MS.gene023498:CDS | 35.0% | |
| TCATTAGCAGATTATGAGGT+GGG | - | chr4.3:15472024-15472043 | None:intergenic | 35.0% | |
| TTAGGTTTCATACTCAAGAG+CGG | + | chr4.3:15473841-15473860 | MS.gene023498:intron | 35.0% | |
| TTATCAGGTGAACCTGATAA+TGG | - | chr4.3:15472364-15472383 | None:intergenic | 35.0% | |
| TTCACCTGATAAAGCCAATA+AGG | + | chr4.3:15472372-15472391 | MS.gene023498:CDS | 35.0% | |
| TTTCATACCTCGAATGATGA+TGG | - | chr4.3:15474268-15474287 | None:intergenic | 35.0% | |
| TTTGGGAGTAGTGTATATAG+GGG | + | chr4.3:15473081-15473100 | MS.gene023498:intron | 35.0% | |
| ! | AAACAACTCTTTGGTTTCTG+TGG | + | chr4.3:15472460-15472479 | MS.gene023498:CDS | 35.0% |
| ! | ATCCAGGTGTGATATTTTGT+TGG | + | chr4.3:15472882-15472901 | MS.gene023498:intron | 35.0% |
| ! | ATGCCCTGCATATGAATTTT+AGG | + | chr4.3:15473285-15473304 | MS.gene023498:intron | 35.0% |
| ! | ATGTTGTCAATAGAGTGCTA+TGG | + | chr4.3:15471233-15471252 | MS.gene023498:intron | 35.0% |
| ! | CATCATTCTAAAGGTAAGTC+TGG | + | chr4.3:15475214-15475233 | MS.gene023498:CDS | 35.0% |
| ! | CTGATTTTGCTACCATTATC+AGG | + | chr4.3:15472349-15472368 | MS.gene023498:intron | 35.0% |
| ! | GAACAAAAAGGCGTACAATT+TGG | + | chr4.3:15473761-15473780 | MS.gene023498:intron | 35.0% |
| ! | GAGAGACCTTTGAAAACAAA+AGG | - | chr4.3:15474084-15474103 | None:intergenic | 35.0% |
| ! | GATAATGGTAGCAAAATCAG+TGG | - | chr4.3:15472349-15472368 | None:intergenic | 35.0% |
| ! | GCTTTCTTTTCATCAACCTT+CGG | - | chr4.3:15474536-15474555 | None:intergenic | 35.0% |
| ! | TCTTCAATTTCAAGTCCATC+AGG | - | chr4.3:15472844-15472863 | None:intergenic | 35.0% |
| ! | TGGAATTTTCCTCGGTATAT+TGG | - | chr4.3:15473713-15473732 | None:intergenic | 35.0% |
| ! | TTCAAAATGAGTGTCACTCT+AGG | - | chr4.3:15473178-15473197 | None:intergenic | 35.0% |
| !! | AATCAAAGCATCGTGATAGA+AGG | + | chr4.3:15475254-15475273 | MS.gene023498:CDS | 35.0% |
| !! | GAGTGACACTCATTTTGAAA+CGG | + | chr4.3:15473179-15473198 | MS.gene023498:intron | 35.0% |
| !! | GATTTCTTCGTTTTTGTCAG+AGG | - | chr4.3:15474855-15474874 | None:intergenic | 35.0% |
| !! | TGAAGCAACTTTTAAGGGTT+TGG | + | chr4.3:15470711-15470730 | MS.gene023498:CDS | 35.0% |
| !!! | CGATATTCATTTTGAAACGG+AGG | - | chr4.3:15472932-15472951 | None:intergenic | 35.0% |
| !!! | CGCTTTTGAAGCAACTTTTA+AGG | + | chr4.3:15470705-15470724 | MS.gene023498:CDS | 35.0% |
| !!! | GAATTCATAGTTGGTTTTGG+TGG | - | chr4.3:15472631-15472650 | None:intergenic | 35.0% |
| !!! | GTGCTATTTTACCAGGAATT+GGG | + | chr4.3:15471927-15471946 | MS.gene023498:CDS | 35.0% |
| !!! | TACACGCATATCCGTTTTTT+TGG | + | chr4.3:15471690-15471709 | MS.gene023498:intron | 35.0% |
| !!! | TGCTATTTTACCAGGAATTG+GGG | + | chr4.3:15471928-15471947 | MS.gene023498:CDS | 35.0% |
| AACTTGACAGGCTTAAACAC+AGG | - | chr4.3:15473382-15473401 | None:intergenic | 40.0% | |
| AAGAGACGAAACAGAAATCC+AGG | + | chr4.3:15472866-15472885 | MS.gene023498:CDS | 40.0% | |
| AAGGGATTGTGAAGGATATG+GGG | + | chr4.3:15470992-15471011 | MS.gene023498:CDS | 40.0% | |
| ACATCTTGAAAATGCCACAC+AGG | + | chr4.3:15475624-15475643 | MS.gene023498:CDS | 40.0% | |
| ACATTCTTCATTTCCCAGCT+AGG | + | chr4.3:15472230-15472249 | MS.gene023498:intron | 40.0% | |
| ACCTGATAAAGCCAATAAGG+AGG | + | chr4.3:15472375-15472394 | MS.gene023498:CDS | 40.0% | |
| AGAACACAAAGTTCAATGGG+TGG | + | chr4.3:15475713-15475732 | MS.gene023498:CDS | 40.0% | |
| AGAAGGGATTGTGAAGGATA+TGG | + | chr4.3:15470990-15471009 | MS.gene023498:CDS | 40.0% | |
| AGAAGTAGAAGATCAAGGCA+TGG | + | chr4.3:15475058-15475077 | MS.gene023498:CDS | 40.0% | |
| AGCCAGATCCTCATAATCAT+CGG | - | chr4.3:15470779-15470798 | None:intergenic | 40.0% | |
| AGCTGATGATAACTCAGGTA+TGG | + | chr4.3:15475750-15475769 | MS.gene023498:intron | 40.0% | |
| ATACCTGCACTGAAAAACAC+AGG | - | chr4.3:15471114-15471133 | None:intergenic | 40.0% | |
| ATGATTCCAGGAATTGTTGC+TGG | + | chr4.3:15471893-15471912 | MS.gene023498:CDS | 40.0% | |
| ATTCGAGGTATGAAAGGGAA+TGG | + | chr4.3:15474273-15474292 | MS.gene023498:CDS | 40.0% | |
| CCAAACACAGTGCAATATCA+AGG | - | chr4.3:15472267-15472286 | None:intergenic | 40.0% | |
| CCAATCTTCTCCAAGAAAAG+TGG | + | chr4.3:15474703-15474722 | MS.gene023498:CDS | 40.0% | |
| CCTTGATATTGCACTGTGTT+TGG | + | chr4.3:15472264-15472283 | MS.gene023498:intron | 40.0% | |
| CGTAGTTAAGGCCACAATAA+CGG | - | chr4.3:15471304-15471323 | None:intergenic | 40.0% | |
| CTTCAACACATCCTCCTTAT+TGG | - | chr4.3:15472389-15472408 | None:intergenic | 40.0% | |
| GAAAGTAAGCATGACAAACG+AGG | + | chr4.3:15475298-15475317 | MS.gene023498:CDS | 40.0% | |
| GAAGGGATTGTGAAGGATAT+GGG | + | chr4.3:15470991-15471010 | MS.gene023498:CDS | 40.0% | |
| GAATCATTCCCAACAATCCT+GGG | - | chr4.3:15471880-15471899 | None:intergenic | 40.0% | |
| GATCAAGGCATGGTGATAAA+AGG | + | chr4.3:15475068-15475087 | MS.gene023498:CDS | 40.0% | |
| GCAAGGAGCAATGTATAGAA+GGG | - | chr4.3:15473468-15473487 | None:intergenic | 40.0% | |
| GCAGTCATTAGCAGATTATG+AGG | - | chr4.3:15472028-15472047 | None:intergenic | 40.0% | |
| GCCTAAGAGAGGGAATTATA+TGG | + | chr4.3:15471044-15471063 | MS.gene023498:CDS | 40.0% | |
| GCGTCCTTTGAATGTTGAAA+TGG | + | chr4.3:15472594-15472613 | MS.gene023498:CDS | 40.0% | |
| GCTCTTGATCTTTGCTTCTT+CGG | - | chr4.3:15470656-15470675 | None:intergenic | 40.0% | |
| GGAAGTGACATATTGTTGGT+TGG | + | chr4.3:15473948-15473967 | MS.gene023498:intron | 40.0% | |
| GGAGAAAATGGTACAAGTGA+AGG | + | chr4.3:15475592-15475611 | MS.gene023498:CDS | 40.0% | |
| GGAGGAAGTTCATCTTATAG+AGG | + | chr4.3:15474449-15474468 | MS.gene023498:CDS | 40.0% | |
| GGCTTAAACACAGGCATTTA+AGG | - | chr4.3:15473373-15473392 | None:intergenic | 40.0% | |
| GTCATTAGCAGATTATGAGG+TGG | - | chr4.3:15472025-15472044 | None:intergenic | 40.0% | |
| GTTCGAGAAGAAACAGAAGT+AGG | + | chr4.3:15474378-15474397 | MS.gene023498:CDS | 40.0% | |
| TAAGGATGCTAATGAGAGGA+AGG | + | chr4.3:15470900-15470919 | MS.gene023498:CDS | 40.0% | |
| TACCTGCACTGAAAAACACA+GGG | - | chr4.3:15471113-15471132 | None:intergenic | 40.0% | |
| TGAAGAAACCGTGAATGAGA+AGG | + | chr4.3:15474619-15474638 | MS.gene023498:CDS | 40.0% | |
| TGACTAAGGATGCTAATGAG+AGG | + | chr4.3:15470896-15470915 | MS.gene023498:CDS | 40.0% | |
| TGAGTAGGAAGGAAACACTA+TGG | + | chr4.3:15471498-15471517 | MS.gene023498:intron | 40.0% | |
| TGATCAAGAAGGGATTGTGA+AGG | + | chr4.3:15470984-15471003 | MS.gene023498:CDS | 40.0% | |
| TGATGCATGTGTAACTTGAC+AGG | - | chr4.3:15473394-15473413 | None:intergenic | 40.0% | |
| TGCAAGGAGCAATGTATAGA+AGG | - | chr4.3:15473469-15473488 | None:intergenic | 40.0% | |
| TGCTAATGAGAGGAAGGTTT+CGG | + | chr4.3:15470906-15470925 | MS.gene023498:CDS | 40.0% | |
| TGTAATGGCAGACCAATCAA+TGG | + | chr4.3:15471078-15471097 | MS.gene023498:CDS | 40.0% | |
| TTAGCTGCGACAACTTCAAT+GGG | + | chr4.3:15472049-15472068 | MS.gene023498:CDS | 40.0% | |
| TTCCGATGATTATGAGGATC+TGG | + | chr4.3:15470774-15470793 | MS.gene023498:CDS | 40.0% | |
| TTCTTCTCGAACCAGATGAA+TGG | - | chr4.3:15474370-15474389 | None:intergenic | 40.0% | |
| TTTCCTCGGTATATTGGTGA+TGG | - | chr4.3:15473707-15473726 | None:intergenic | 40.0% | |
| ! | AAGCAACGTGGAATTTTCCT+CGG | - | chr4.3:15473721-15473740 | None:intergenic | 40.0% |
| ! | AGGAATAAAGTACTCCTAGC+TGG | - | chr4.3:15472247-15472266 | None:intergenic | 40.0% |
| ! | ATATAGAATTGCCGATTGCC+AGG | - | chr4.3:15473974-15473993 | None:intergenic | 40.0% |
| ! | ATCTGGCTCATAAGCCAATT+GGG | + | chr4.3:15470791-15470810 | MS.gene023498:CDS | 40.0% |
| ! | CGTTATTGTGGCCTTAACTA+CGG | + | chr4.3:15471302-15471321 | MS.gene023498:intron | 40.0% |
| ! | GGAATAAAGTACTCCTAGCT+GGG | - | chr4.3:15472246-15472265 | None:intergenic | 40.0% |
| ! | TTGTCAATAGAGTGCTATGG+CGG | + | chr4.3:15471236-15471255 | MS.gene023498:intron | 40.0% |
| ! | TTGTTTGGCCTTCTCATTCA+CGG | - | chr4.3:15474630-15474649 | None:intergenic | 40.0% |
| !! | AGCGTAATAGTTTGCTGTAG+AGG | + | chr4.3:15471278-15471297 | MS.gene023498:intron | 40.0% |
| !! | CCACTTTTCTTGGAGAAGAT+TGG | - | chr4.3:15474706-15474725 | None:intergenic | 40.0% |
| !! | CTGCTTTCATCCACTTTTCT+TGG | - | chr4.3:15474716-15474735 | None:intergenic | 40.0% |
| !! | GAAGGGAAGCATCATTCTAA+AGG | + | chr4.3:15475205-15475224 | MS.gene023498:CDS | 40.0% |
| !! | GAATGATGATGGAACCTCAA+TGG | - | chr4.3:15474257-15474276 | None:intergenic | 40.0% |
| !! | TCCTCCTTATTGGCTTTATC+AGG | - | chr4.3:15472379-15472398 | None:intergenic | 40.0% |
| !!! | ATGACGTTTTGGAGAAACAG+GGG | - | chr4.3:15474429-15474448 | None:intergenic | 40.0% |
| !!! | CATGACGTTTTGGAGAAACA+GGG | - | chr4.3:15474430-15474449 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4.3:15473183-15473202 | MS.gene023498:intron | 40.0% |
| !!! | GGTGCTATTTTACCAGGAAT+TGG | + | chr4.3:15471926-15471945 | MS.gene023498:CDS | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | + | chr4.3:15473182-15473201 | MS.gene023498:intron | 40.0% |
| AACAGGTCAGAGTCTGATGA+AGG | + | chr4.3:15475187-15475206 | MS.gene023498:CDS | 45.0% | |
| AAGCATGAGGCAAAGCTGAA+CGG | + | chr4.3:15473614-15473633 | MS.gene023498:intron | 45.0% | |
| AAGTGGATGAAAGCAGATCC+AGG | + | chr4.3:15474966-15474985 | MS.gene023498:CDS | 45.0% | |
| AATGAGAGGAAGGTTTCGGT+TGG | + | chr4.3:15470910-15470929 | MS.gene023498:CDS | 45.0% | |
| ACAAAATATGACTGCCCAGC+AGG | + | chr4.3:15472738-15472757 | MS.gene023498:CDS | 45.0% | |
| ACAGCAGGGAACATAGTGAT+AGG | + | chr4.3:15474309-15474328 | MS.gene023498:CDS | 45.0% | |
| ACAGGTCAGAGTCTGATGAA+GGG | + | chr4.3:15475188-15475207 | MS.gene023498:CDS | 45.0% | |
| ACTTATGTGGTGCCTAAGAG+AGG | + | chr4.3:15471033-15471052 | MS.gene023498:CDS | 45.0% | |
| AGAAGCAAAGATCAAGAGCG+AGG | + | chr4.3:15470657-15470676 | MS.gene023498:CDS | 45.0% | |
| AGGCCAAACAAAGAGATCGA+AGG | + | chr4.3:15474639-15474658 | MS.gene023498:CDS | 45.0% | |
| AGGGATTGTGAAGGATATGG+GGG | + | chr4.3:15470993-15471012 | MS.gene023498:CDS | 45.0% | |
| AGGGGAAGGTGATCTACAAA+AGG | - | chr4.3:15474126-15474145 | None:intergenic | 45.0% | |
| ATGAGAGGAAGGTTTCGGTT+GGG | + | chr4.3:15470911-15470930 | MS.gene023498:CDS | 45.0% | |
| ATGTTCCCTGCTGTCTCTAT+AGG | - | chr4.3:15474303-15474322 | None:intergenic | 45.0% | |
| ATTACTGTGAAAGTGACGCC+GGG | + | chr4.3:15470943-15470962 | MS.gene023498:CDS | 45.0% | |
| ATTGTGAAGGATATGGGGGA+TGG | + | chr4.3:15470997-15471016 | MS.gene023498:CDS | 45.0% | |
| ATTTCTCTCTCTCTCTCTGG+TGG | + | chr4.3:15473488-15473507 | MS.gene023498:intron | 45.0% | |
| CACTCCCATCATCATATTGC+TGG | - | chr4.3:15475480-15475499 | None:intergenic | 45.0% | |
| CAGATTTCATGGTTGCAGCT+CGG | - | chr4.3:15472771-15472790 | None:intergenic | 45.0% | |
| CAGTCAGCAAAAGATTCTGC+TGG | + | chr4.3:15472166-15472185 | MS.gene023498:CDS | 45.0% | |
| CATTGAAGTTGTCGCAGCTA+AGG | - | chr4.3:15472050-15472069 | None:intergenic | 45.0% | |
| CCAAACAAAGAGATCGAAGG+CGG | + | chr4.3:15474642-15474661 | MS.gene023498:CDS | 45.0% | |
| CCAGAGTAATTCGGCATGTT+CGG | - | chr4.3:15471839-15471858 | None:intergenic | 45.0% | |
| CTGGAATTGCATCTGTTGCA+TGG | - | chr4.3:15472701-15472720 | None:intergenic | 45.0% | |
| CTTAGCTGCGACAACTTCAA+TGG | + | chr4.3:15472048-15472067 | MS.gene023498:CDS | 45.0% | |
| CTTATGTGGTGCCTAAGAGA+GGG | + | chr4.3:15471034-15471053 | MS.gene023498:CDS | 45.0% | |
| GACTTTGATCGTGATCGTTC+AGG | - | chr4.3:15474152-15474171 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAAATGCA+AGG | - | chr4.3:15473485-15473504 | None:intergenic | 45.0% | |
| GATTACTGTGAAAGTGACGC+CGG | + | chr4.3:15470942-15470961 | MS.gene023498:CDS | 45.0% | |
| GCACTGAAAAACACAGGGAA+TGG | - | chr4.3:15471108-15471127 | None:intergenic | 45.0% | |
| GCGTCACTTGTCTGGAAAAT+CGG | + | chr4.3:15475027-15475046 | MS.gene023498:CDS | 45.0% | |
| GCGTTGAAGAAGTCAGAAGT+GGG | + | chr4.3:15475865-15475884 | MS.gene023498:CDS | 45.0% | |
| GGAATCATTCCCAACAATCC+TGG | - | chr4.3:15471881-15471900 | None:intergenic | 45.0% | |
| GGATTGTTGGGAATGATTCC+AGG | + | chr4.3:15471881-15471900 | MS.gene023498:CDS | 45.0% | |
| GGGAACATAGTGATAGGTAC+AGG | + | chr4.3:15474315-15474334 | MS.gene023498:CDS | 45.0% | |
| GGGGAAGGTGATCTACAAAA+GGG | - | chr4.3:15474125-15474144 | None:intergenic | 45.0% | |
| GTAGAAGATGAAGGCAGCAA+AGG | + | chr4.3:15473919-15473938 | MS.gene023498:intron | 45.0% | |
| GTTGCATAATCAGTGCTTGC+TGG | - | chr4.3:15472720-15472739 | None:intergenic | 45.0% | |
| GTTTCTCCAAAACGTCATGG+AGG | + | chr4.3:15474431-15474450 | MS.gene023498:CDS | 45.0% | |
| TATGGGGGATGGGACTTATA+CGG | + | chr4.3:15471008-15471027 | MS.gene023498:CDS | 45.0% | |
| TCTTAGTCCACTTCTCACTG+TGG | + | chr4.3:15472429-15472448 | MS.gene023498:CDS | 45.0% | |
| TGAAGGCAGCAAAGGTAAGA+AGG | + | chr4.3:15473927-15473946 | MS.gene023498:intron | 45.0% | |
| TGAGGTTCCATCATCATTCG+AGG | + | chr4.3:15474258-15474277 | MS.gene023498:CDS | 45.0% | |
| TGCATTTCTCTCTCTCTCTC+TGG | + | chr4.3:15473485-15473504 | MS.gene023498:intron | 45.0% | |
| TGCGTTGAAGAAGTCAGAAG+TGG | + | chr4.3:15475864-15475883 | MS.gene023498:CDS | 45.0% | |
| TGCTTTCATCCACTTTCCGT+GGG | - | chr4.3:15474961-15474980 | None:intergenic | 45.0% | |
| TTCAATGGGAACACTTAGCC+AGG | + | chr4.3:15472063-15472082 | MS.gene023498:CDS | 45.0% | |
| TTCAGCTTTGCCTCATGCTT+TGG | - | chr4.3:15473614-15473633 | None:intergenic | 45.0% | |
| TTGGAGGGTCTGATCAAGAA+GGG | + | chr4.3:15470974-15470993 | MS.gene023498:CDS | 45.0% | |
| TTGTGAAGGATATGGGGGAT+GGG | + | chr4.3:15470998-15471017 | MS.gene023498:CDS | 45.0% | |
| TTTCATACTCAAGAGCGGTG+TGG | + | chr4.3:15473846-15473865 | MS.gene023498:intron | 45.0% | |
| TTTGATCGTGATCGTTCAGG+AGG | - | chr4.3:15474149-15474168 | None:intergenic | 45.0% | |
| TTTGTCGTGACTACCTGAGT+GGG | + | chr4.3:15471966-15471985 | MS.gene023498:CDS | 45.0% | |
| ! | AATAGTAATGGAGGGCTGCT+GGG | + | chr4.3:15471767-15471786 | MS.gene023498:CDS | 45.0% |
| ! | AATGATGGTGCCAAAGCATG+AGG | + | chr4.3:15473601-15473620 | MS.gene023498:intron | 45.0% |
| ! | CCTGTTTCTCCAAAACGTCA+TGG | + | chr4.3:15474428-15474447 | MS.gene023498:CDS | 45.0% |
| ! | GAACTTCCTCCATGACGTTT+TGG | - | chr4.3:15474440-15474459 | None:intergenic | 45.0% |
| ! | GATCTGGCTCATAAGCCAAT+TGG | + | chr4.3:15470790-15470809 | MS.gene023498:CDS | 45.0% |
| ! | TAATAGTAATGGAGGGCTGC+TGG | + | chr4.3:15471766-15471785 | MS.gene023498:CDS | 45.0% |
| ! | TAGAAGGGACGTGTTATTCG+CGG | - | chr4.3:15473453-15473472 | None:intergenic | 45.0% |
| ! | TCGGCTTGTTTCATCCATAC+CGG | - | chr4.3:15470637-15470656 | None:intergenic | 45.0% |
| ! | TGACATATTGTTGGTTGGCC+TGG | + | chr4.3:15473953-15473972 | MS.gene023498:intron | 45.0% |
| ! | TTCAAAAGCGGCTTTTGCAG+CGG | - | chr4.3:15470695-15470714 | None:intergenic | 45.0% |
| !! | AAACAGTCTCGTGCTGATTC+TGG | + | chr4.3:15474476-15474495 | MS.gene023498:CDS | 45.0% |
| !! | AATGGGTGGACTGAAAATGC+AGG | + | chr4.3:15475727-15475746 | MS.gene023498:CDS | 45.0% |
| !! | ACAGCTTGCTGCATCATCAA+AGG | - | chr4.3:15472676-15472695 | None:intergenic | 45.0% |
| !! | ATCGTCCACAGATTTTGACC+TGG | - | chr4.3:15474759-15474778 | None:intergenic | 45.0% |
| !! | ATCGTGATAGAAGGCGTTCT+AGG | + | chr4.3:15475263-15475282 | MS.gene023498:CDS | 45.0% |
| !! | CATCCATACCGGTTTCACAA+CGG | - | chr4.3:15470626-15470645 | None:intergenic | 45.0% |
| !! | GGGAATGGACTACCATTGAT+TGG | - | chr4.3:15471093-15471112 | None:intergenic | 45.0% |
| !! | TTCCCTGTGTTTTTCAGTGC+AGG | + | chr4.3:15471108-15471127 | MS.gene023498:CDS | 45.0% |
| !!! | CCATGACGTTTTGGAGAAAC+AGG | - | chr4.3:15474431-15474450 | None:intergenic | 45.0% |
| !!! | TCTGGAGGTGCTATTTTACC+AGG | + | chr4.3:15471920-15471939 | MS.gene023498:CDS | 45.0% |
| AAGTGGATGAAAGCAGACCC+AGG | + | chr4.3:15474720-15474739 | MS.gene023498:CDS | 50.0% | |
| AAGTGTACTGCTGCTGGTAC+TGG | + | chr4.3:15470829-15470848 | MS.gene023498:CDS | 50.0% | |
| ACCGACGAGCCTTAGAATAG+CGG | - | chr4.3:15474226-15474245 | None:intergenic | 50.0% | |
| ACTGAGCTGCATGAGCTTGA+AGG | - | chr4.3:15472150-15472169 | None:intergenic | 50.0% | |
| AGCTGTTCCACAGTGAGAAG+TGG | - | chr4.3:15472439-15472458 | None:intergenic | 50.0% | |
| AGGAAGTAGGTCTTCTCCGA+AGG | + | chr4.3:15474517-15474536 | MS.gene023498:CDS | 50.0% | |
| AGGCTTCTCGCCTACAGATA+CGG | - | chr4.3:15474921-15474940 | None:intergenic | 50.0% | |
| AGTACCAGCAGCAGTACACT+TGG | - | chr4.3:15470830-15470849 | None:intergenic | 50.0% | |
| ATCATCACCGCAGTGATGCT+TGG | - | chr4.3:15475389-15475408 | None:intergenic | 50.0% | |
| ATCGTGATCGTTCAGGAGGA+GGG | - | chr4.3:15474145-15474164 | None:intergenic | 50.0% | |
| ATGGAACCTCAATGGAGACC+TGG | - | chr4.3:15474249-15474268 | None:intergenic | 50.0% | |
| ATTGTTGCTGGAGCTTCTGG+AGG | + | chr4.3:15471905-15471924 | MS.gene023498:CDS | 50.0% | |
| CAAGCAATCGCAGAGGAAGT+AGG | + | chr4.3:15474504-15474523 | MS.gene023498:CDS | 50.0% | |
| CCGAACATGCCGAATTACTC+TGG | + | chr4.3:15471836-15471855 | MS.gene023498:CDS | 50.0% | |
| CCGCCTTCGATCTCTTTGTT+TGG | - | chr4.3:15474645-15474664 | None:intergenic | 50.0% | |
| CCTAATGCCAAGCATCACTG+CGG | + | chr4.3:15475379-15475398 | MS.gene023498:CDS | 50.0% | |
| CGAGGTATGAAAGGGAATGG+AGG | + | chr4.3:15474276-15474295 | MS.gene023498:CDS | 50.0% | |
| CTACTTCCTCTGCGATTGCT+TGG | - | chr4.3:15474506-15474525 | None:intergenic | 50.0% | |
| CTCATCCACAGATACTGACC+TGG | - | chr4.3:15474669-15474688 | None:intergenic | 50.0% | |
| CTGAGCTGCATGAGCTTGAA+GGG | - | chr4.3:15472149-15472168 | None:intergenic | 50.0% | |
| CTGCTTTCATCCACTTTCCG+TGG | - | chr4.3:15474962-15474981 | None:intergenic | 50.0% | |
| GAAGCTCCAGCAACAATTCC+TGG | - | chr4.3:15471902-15471921 | None:intergenic | 50.0% | |
| GACGATAAGCGTCACTTGTC+TGG | + | chr4.3:15475019-15475038 | MS.gene023498:CDS | 50.0% | |
| GAGACGGAGCCAGAGTAATT+CGG | - | chr4.3:15471848-15471867 | None:intergenic | 50.0% | |
| GAGGTCCTATAGAGACAGCA+GGG | + | chr4.3:15474295-15474314 | MS.gene023498:CDS | 50.0% | |
| GAGTTTGGCCGTTGTGAAAC+CGG | + | chr4.3:15470615-15470634 | MS.gene023498:CDS | 50.0% | |
| GCACCATCACCAATATACCG+AGG | + | chr4.3:15473701-15473720 | MS.gene023498:intron | 50.0% | |
| GCAGATCCAGGCATAAGAAG+CGG | + | chr4.3:15474978-15474997 | MS.gene023498:CDS | 50.0% | |
| GCAGGAGCTGATGATAACTC+AGG | + | chr4.3:15475745-15475764 | MS.gene023498:CDS | 50.0% | |
| GCTTTCATCCACTTTCCGTG+GGG | - | chr4.3:15474960-15474979 | None:intergenic | 50.0% | |
| GGAATTGTTGCTGGAGCTTC+TGG | + | chr4.3:15471902-15471921 | MS.gene023498:CDS | 50.0% | |
| GTACACTTGGAAGGATCCAC+CGG | - | chr4.3:15470817-15470836 | None:intergenic | 50.0% | |
| GTGCTATGGCGGCATACTAT+TGG | + | chr4.3:15471247-15471266 | MS.gene023498:intron | 50.0% | |
| GTTGGAGGGTCTGATCAAGA+AGG | + | chr4.3:15470973-15470992 | MS.gene023498:CDS | 50.0% | |
| GTTTGTCGTGACTACCTGAG+TGG | + | chr4.3:15471965-15471984 | MS.gene023498:CDS | 50.0% | |
| TACTGGAATTGCCGGAGGAA+CGG | + | chr4.3:15470846-15470865 | MS.gene023498:CDS | 50.0% | |
| TCGAGCTGCAGCTAAATCTG+TGG | - | chr4.3:15472794-15472813 | None:intergenic | 50.0% | |
| TGAGAGGAAGGTTTCGGTTG+GGG | + | chr4.3:15470912-15470931 | MS.gene023498:CDS | 50.0% | |
| TGCATGAGCTTGAAGGGCTT+GGG | - | chr4.3:15472143-15472162 | None:intergenic | 50.0% | |
| TGCTGTAGAGGCCGTTATTG+TGG | + | chr4.3:15471290-15471309 | MS.gene023498:intron | 50.0% | |
| ! | AATTACTCTGGCTCCGTCTC+AGG | + | chr4.3:15471848-15471867 | MS.gene023498:CDS | 50.0% |
| ! | ATTACTCTGGCTCCGTCTCA+GGG | + | chr4.3:15471849-15471868 | MS.gene023498:CDS | 50.0% |
| !! | TTGTTGGTTGGCCTGGCAAT+CGG | + | chr4.3:15473960-15473979 | MS.gene023498:intron | 50.0% |
| AAAGAGATCGAAGGCGGTCC+AGG | + | chr4.3:15474648-15474667 | MS.gene023498:CDS | 55.0% | |
| AACACTTAGCCAGGCTCCGA+TGG | + | chr4.3:15472072-15472091 | MS.gene023498:CDS | 55.0% | |
| ACAGGGGATCTCCTTGCATG+AGG | - | chr4.3:15474413-15474432 | None:intergenic | 55.0% | |
| ACGACAAACTTCCCCGAGTG+TGG | - | chr4.3:15471954-15471973 | None:intergenic | 55.0% | |
| AGACAGGGCTGATGTCAGAG+AGG | + | chr4.3:15475120-15475139 | MS.gene023498:CDS | 55.0% | |
| AGGGCTGATGTCAGAGAGGA+TGG | + | chr4.3:15475124-15475143 | MS.gene023498:CDS | 55.0% | |
| AGGGGCTTTCCCAGGATTGT+TGG | + | chr4.3:15471868-15471887 | MS.gene023498:CDS | 55.0% | |
| AGGTCCAGGTCCGTATCTGT+AGG | + | chr4.3:15474908-15474927 | MS.gene023498:CDS | 55.0% | |
| ATAGCAGCAGCTGCCTCTTC+AGG | - | chr4.3:15472547-15472566 | None:intergenic | 55.0% | |
| CCAGCAGCAGTACACTTGGA+AGG | - | chr4.3:15470826-15470845 | None:intergenic | 55.0% | |
| CCGACGAGCCTTAGAATAGC+GGG | - | chr4.3:15474225-15474244 | None:intergenic | 55.0% | |
| CCGCAGTGATGCTTGGCATT+AGG | - | chr4.3:15475382-15475401 | None:intergenic | 55.0% | |
| CCTTCCAAGTGTACTGCTGC+TGG | + | chr4.3:15470823-15470842 | MS.gene023498:CDS | 55.0% | |
| CGACGAGCCTTAGAATAGCG+GGG | - | chr4.3:15474224-15474243 | None:intergenic | 55.0% | |
| CTCACCTCCCCGCTATTCTA+AGG | + | chr4.3:15474214-15474233 | MS.gene023498:CDS | 55.0% | |
| CTGCATGAGCTTGAAGGGCT+TGG | - | chr4.3:15472144-15472163 | None:intergenic | 55.0% | |
| CTGTGGATGAGAAGCCTCAC+AGG | + | chr4.3:15474678-15474697 | MS.gene023498:CDS | 55.0% | |
| GAGAGGAAGGTTTCGGTTGG+GGG | + | chr4.3:15470913-15470932 | MS.gene023498:CDS | 55.0% | |
| GATCGTGATCGTTCAGGAGG+AGG | - | chr4.3:15474146-15474165 | None:intergenic | 55.0% | |
| GCGGTCCAGGTCAAAATCTG+TGG | + | chr4.3:15474751-15474770 | MS.gene023498:CDS | 55.0% | |
| GGAGGTCCTATAGAGACAGC+AGG | + | chr4.3:15474294-15474313 | MS.gene023498:CDS | 55.0% | |
| GGAGTGTGAGTCCTCATGCA+AGG | + | chr4.3:15474399-15474418 | MS.gene023498:CDS | 55.0% | |
| GGCTCATAAGCCAATTGGGC+CGG | + | chr4.3:15470795-15470814 | MS.gene023498:CDS | 55.0% | |
| GGGGCTTTCCCAGGATTGTT+GGG | + | chr4.3:15471869-15471888 | MS.gene023498:CDS | 55.0% | |
| GGTTCTCCAAGCAATCGCAG+AGG | + | chr4.3:15474497-15474516 | MS.gene023498:CDS | 55.0% | |
| GTGAAAGTGACGCCGGGTTT+GGG | + | chr4.3:15470949-15470968 | MS.gene023498:CDS | 55.0% | |
| TCATAAGCCAATTGGGCCGG+TGG | + | chr4.3:15470798-15470817 | MS.gene023498:CDS | 55.0% | |
| TCGTGATCGTTCAGGAGGAG+GGG | - | chr4.3:15474144-15474163 | None:intergenic | 55.0% | |
| TGAAGAGGCAGCTGCTGCTA+TGG | + | chr4.3:15472546-15472565 | MS.gene023498:CDS | 55.0% | |
| TGGCCGTTGTGAAACCGGTA+TGG | + | chr4.3:15470620-15470639 | MS.gene023498:CDS | 55.0% | |
| TGTGAAAGTGACGCCGGGTT+TGG | + | chr4.3:15470948-15470967 | MS.gene023498:CDS | 55.0% | |
| TTCGTTCGCGGTGGTGACTA+AGG | + | chr4.3:15470882-15470901 | MS.gene023498:CDS | 55.0% | |
| ! | AGAATAGCGGGGAGGTGAGT+AGG | - | chr4.3:15474213-15474232 | None:intergenic | 55.0% |
| ! | CAGAGTAGCGGTCGCTTTGA+GGG | + | chr4.3:15471381-15471400 | MS.gene023498:intron | 55.0% |
| ! | CTTTGAGGGTGGATGCTACG+TGG | + | chr4.3:15471395-15471414 | MS.gene023498:intron | 55.0% |
| ! | GCTGCTGGTACTGGAATTGC+CGG | + | chr4.3:15470838-15470857 | MS.gene023498:CDS | 55.0% |
| ! | GGAGAAGATTGGCTCCTGTG+AGG | - | chr4.3:15474695-15474714 | None:intergenic | 55.0% |
| ! | TCAGAGTAGCGGTCGCTTTG+AGG | + | chr4.3:15471380-15471399 | MS.gene023498:intron | 55.0% |
| ! | TTACTCTGGCTCCGTCTCAG+GGG | + | chr4.3:15471850-15471869 | MS.gene023498:CDS | 55.0% |
| !! | ATTCTAAGGCTCGTCGGTCC+AGG | + | chr4.3:15474228-15474247 | MS.gene023498:CDS | 55.0% |
| !! | CAAGAAACAGAAGGCGCTCG+AGG | + | chr4.3:15474555-15474574 | MS.gene023498:CDS | 55.0% |
| !! | CCCGCTATTCTAAGGCTCGT+CGG | + | chr4.3:15474222-15474241 | MS.gene023498:CDS | 55.0% |
| !! | CTGTGCTGCTTCTTCGTTCG+CGG | + | chr4.3:15470870-15470889 | MS.gene023498:CDS | 55.0% |
| AGAGGAGGCGATCATCCCCA+CGG | + | chr4.3:15474942-15474961 | MS.gene023498:CDS | 60.0% | |
| AGCTCGGTTAGCAGCCTGCT+GGG | - | chr4.3:15472755-15472774 | None:intergenic | 60.0% | |
| AGGAATTGGGGCCACACTCG+GGG | + | chr4.3:15471940-15471959 | MS.gene023498:CDS | 60.0% | |
| CAGGAATTGGGGCCACACTC+GGG | + | chr4.3:15471939-15471958 | MS.gene023498:CDS | 60.0% | |
| CCAGGAATTGGGGCCACACT+CGG | + | chr4.3:15471938-15471957 | MS.gene023498:CDS | 60.0% | |
| CCAGGCATAAGAAGCGGTCC+AGG | + | chr4.3:15474984-15475003 | MS.gene023498:CDS | 60.0% | |
| CCTGGACCGCTTCTTATGCC+TGG | - | chr4.3:15474987-15475006 | None:intergenic | 60.0% | |
| CGCGAACGAAGAAGCAGCAC+AGG | - | chr4.3:15470872-15470891 | None:intergenic | 60.0% | |
| CTCGCCTACAGATACGGACC+TGG | - | chr4.3:15474915-15474934 | None:intergenic | 60.0% | |
| CTGGACCGCTTCTTGTGCCT+GGG | - | chr4.3:15474740-15474759 | None:intergenic | 60.0% | |
| CTGTAGGCGAGAAGCCTCAG+AGG | + | chr4.3:15474924-15474943 | MS.gene023498:CDS | 60.0% | |
| GAAGGATCCACCGGCCCAAT+TGG | - | chr4.3:15470808-15470827 | None:intergenic | 60.0% | |
| GACCCTCCAACACCCAAACC+CGG | - | chr4.3:15470964-15470983 | None:intergenic | 60.0% | |
| GATCGTTCAGGAGGAGGGGA+AGG | - | chr4.3:15474140-15474159 | None:intergenic | 60.0% | |
| GCAGACCCAGGCACAAGAAG+CGG | + | chr4.3:15474732-15474751 | MS.gene023498:CDS | 60.0% | |
| GCAGCCATTGCAGCAGCAGA+TGG | - | chr4.3:15472100-15472119 | None:intergenic | 60.0% | |
| GCGATCATCCCCACGGAAAG+TGG | + | chr4.3:15474949-15474968 | MS.gene023498:CDS | 60.0% | |
| GCGGTCCAGGTCAGTATCTG+TGG | + | chr4.3:15474661-15474680 | MS.gene023498:CDS | 60.0% | |
| GGCACCATCTGCTGCTGCAA+TGG | + | chr4.3:15472093-15472112 | MS.gene023498:CDS | 60.0% | |
| GTCGGTCCAGGTCTCCATTG+AGG | + | chr4.3:15474240-15474259 | MS.gene023498:CDS | 60.0% | |
| TAGGCGAGAAGCCTCAGAGG+AGG | + | chr4.3:15474927-15474946 | MS.gene023498:CDS | 60.0% | |
| TCCTGGGAAAGCCCCTGAGA+CGG | - | chr4.3:15471864-15471883 | None:intergenic | 60.0% | |
| TGCTGCAATGGCTGCTGCTC+AGG | + | chr4.3:15472105-15472124 | MS.gene023498:CDS | 60.0% | |
| ! | CGAGCCTTAGAATAGCGGGG+AGG | - | chr4.3:15474221-15474240 | None:intergenic | 60.0% |
| ! | CTTTTGCACAGCGCCCACTC+AGG | - | chr4.3:15471982-15472001 | None:intergenic | 60.0% |
| ! | GCTGGTACTGGAATTGCCGG+AGG | + | chr4.3:15470841-15470860 | MS.gene023498:CDS | 60.0% |
| ! | TGCTGCTTCTTCGTTCGCGG+TGG | + | chr4.3:15470873-15470892 | MS.gene023498:CDS | 60.0% |
| !! | AGTAGCGGTCGCTTTGAGGG+TGG | + | chr4.3:15471384-15471403 | MS.gene023498:intron | 60.0% |
| !! | GCAGCAGCAGATGGTGCCAT+CGG | - | chr4.3:15472091-15472110 | None:intergenic | 60.0% |
| AGCAGCACAGGCCGTTCCTC+CGG | - | chr4.3:15470860-15470879 | None:intergenic | 65.0% | |
| CAGCTCGGTTAGCAGCCTGC+TGG | - | chr4.3:15472756-15472775 | None:intergenic | 65.0% | |
| CCAGGCACAAGAAGCGGTCC+AGG | + | chr4.3:15474738-15474757 | MS.gene023498:CDS | 65.0% | |
| CCGAGTGTGGCCCCAATTCC+TGG | - | chr4.3:15471941-15471960 | None:intergenic | 65.0% | |
| CCTGGACCGCTTCTTGTGCC+TGG | - | chr4.3:15474741-15474760 | None:intergenic | 65.0% | |
| GGGGATGATCGCCTCCTCTG+AGG | - | chr4.3:15474941-15474960 | None:intergenic | 65.0% | |
| GTGACGCCGGGTTTGGGTGT+TGG | + | chr4.3:15470955-15470974 | MS.gene023498:CDS | 65.0% | |
| TCCGTCTCAGGGGCTTTCCC+AGG | + | chr4.3:15471860-15471879 | MS.gene023498:CDS | 65.0% | |
| !! | ACGCCGGGTTTGGGTGTTGG+AGG | + | chr4.3:15470958-15470977 | MS.gene023498:CDS | 65.0% |
| !! | CAGATGGTGCCATCGGAGCC+TGG | - | chr4.3:15472084-15472103 | None:intergenic | 65.0% |
| !! | CGCCGGGTTTGGGTGTTGGA+GGG | + | chr4.3:15470959-15470978 | MS.gene023498:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 15470604 | 15475896 | 15470604 | ID=MS.gene023498 |
| chr4.3 | mRNA | 15470604 | 15475896 | 15470604 | ID=MS.gene023498.t1;Parent=MS.gene023498 |
| chr4.3 | exon | 15470604 | 15471129 | 15470604 | ID=MS.gene023498.t1.exon1;Parent=MS.gene023498.t1 |
| chr4.3 | CDS | 15470604 | 15471129 | 15470604 | ID=cds.MS.gene023498.t1;Parent=MS.gene023498.t1 |
| chr4.3 | exon | 15471765 | 15472187 | 15471765 | ID=MS.gene023498.t1.exon2;Parent=MS.gene023498.t1 |
| chr4.3 | CDS | 15471765 | 15472187 | 15471765 | ID=cds.MS.gene023498.t1;Parent=MS.gene023498.t1 |
| chr4.3 | exon | 15472371 | 15472887 | 15472371 | ID=MS.gene023498.t1.exon3;Parent=MS.gene023498.t1 |
| chr4.3 | CDS | 15472371 | 15472887 | 15472371 | ID=cds.MS.gene023498.t1;Parent=MS.gene023498.t1 |
| chr4.3 | exon | 15474133 | 15475766 | 15474133 | ID=MS.gene023498.t1.exon4;Parent=MS.gene023498.t1 |
| chr4.3 | CDS | 15474133 | 15475766 | 15474133 | ID=cds.MS.gene023498.t1;Parent=MS.gene023498.t1 |
| chr4.3 | exon | 15475856 | 15475896 | 15475856 | ID=MS.gene023498.t1.exon5;Parent=MS.gene023498.t1 |
| chr4.3 | CDS | 15475856 | 15475896 | 15475856 | ID=cds.MS.gene023498.t1;Parent=MS.gene023498.t1 |
| Gene Sequence |
| Protein sequence |
