AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene023894

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023894.t1 MTR_7g077670 96.584 322 11 0 1 322 1 322 0.0 637
MS.gene023894.t1 MTR_8g030880 75.394 317 77 1 2 317 1 317 0.0 509
MS.gene023894.t1 MTR_1g034140 33.441 311 186 8 10 306 26 329 1.27e-43 153
MS.gene023894.t1 MTR_2g083030 31.307 329 180 10 1 310 27 328 1.80e-39 142
MS.gene023894.t1 MTR_4g074130 34.351 262 153 8 10 262 39 290 1.42e-38 140
MS.gene023894.t1 MTR_5g005570 32.103 271 165 8 7 269 33 292 6.93e-38 137
MS.gene023894.t1 MTR_4g087110 30.000 320 192 10 11 306 26 337 1.02e-37 137
MS.gene023894.t1 MTR_4g087100 31.148 305 173 12 11 287 26 321 2.78e-37 136
MS.gene023894.t1 MTR_7g451860 31.183 279 156 7 9 269 39 299 4.91e-37 135
MS.gene023894.t1 MTR_7g047670 31.183 279 156 7 9 269 39 299 4.91e-37 135
MS.gene023894.t1 MTR_4g011720 31.058 293 192 5 26 317 31 314 5.15e-37 135
MS.gene023894.t1 MTR_5g025090 31.379 290 182 5 11 296 5 281 6.33e-37 134
MS.gene023894.t1 MTR_1g034120 30.183 328 185 12 11 307 26 340 6.53e-37 135
MS.gene023894.t1 MTR_4g087140 29.653 317 187 12 11 299 26 334 3.79e-36 133
MS.gene023894.t1 MTR_1g034060 30.303 330 182 13 11 307 26 340 1.18e-35 132
MS.gene023894.t1 MTR_4g087120 29.836 305 177 11 11 287 26 321 1.31e-34 129
MS.gene023894.t1 MTR_4g011690 28.571 322 212 9 5 317 3 315 1.96e-34 128
MS.gene023894.t1 MTR_6g464620 32.803 314 179 11 10 302 63 365 2.45e-34 129
MS.gene023894.t1 MTR_1g102070 32.484 314 178 10 11 302 59 360 3.68e-34 129
MS.gene023894.t1 MTR_8g033380 30.255 314 186 9 10 302 53 354 4.19e-34 128
MS.gene023894.t1 MTR_4g087090 30.284 317 190 11 11 306 30 336 4.71e-33 125
MS.gene023894.t1 MTR_3g088745 29.338 317 202 8 2 302 27 337 4.81e-33 125
MS.gene023894.t1 MTR_8g093930 26.814 317 210 9 1 302 37 346 1.98e-32 124
MS.gene023894.t1 MTR_1g011580 28.247 308 207 7 3 307 55 351 2.35e-32 123
MS.gene023894.t1 MTR_2g102570 28.615 325 214 8 1 318 42 355 3.16e-32 123
MS.gene023894.t1 MTR_7g062550 31.058 293 188 9 9 294 58 343 3.22e-32 123
MS.gene023894.t1 MTR_7g090520 27.891 294 197 7 11 295 10 297 1.86e-31 120
MS.gene023894.t1 MTR_6g088665 27.778 324 200 7 2 299 12 327 1.91e-31 120
MS.gene023894.t1 MTR_2g070870 30.275 327 189 12 2 308 19 326 2.31e-31 120
MS.gene023894.t1 MTR_6g088665 27.692 325 200 7 2 299 12 328 2.77e-31 120
MS.gene023894.t1 MTR_0009s0050 30.033 303 194 9 1 294 37 330 2.90e-31 120
MS.gene023894.t1 MTR_0009s0050 30.033 303 194 9 1 294 37 330 3.12e-31 120
MS.gene023894.t1 MTR_3g096500 30.097 309 190 10 12 302 67 367 4.19e-31 120
MS.gene023894.t1 MTR_5g027230 28.620 297 195 5 11 303 6 289 1.02e-30 118
MS.gene023894.t1 MTR_3g040410 31.250 304 181 10 11 300 6 295 2.11e-30 117
MS.gene023894.t1 MTR_8g075830 29.394 330 204 9 10 322 38 355 4.31e-30 117
MS.gene023894.t1 MTR_1g081840 28.155 309 200 8 10 302 52 354 5.62e-30 117
MS.gene023894.t1 MTR_7g062580 28.378 296 192 10 9 294 53 338 7.25e-30 117
MS.gene023894.t1 MTR_5g025050 28.767 292 187 5 11 296 5 281 2.07e-29 114
MS.gene023894.t1 MTR_7g062570 29.592 294 191 11 9 294 53 338 3.03e-29 115
MS.gene023894.t1 MTR_4g021380 30.968 310 186 8 6 296 2 302 3.31e-29 114
MS.gene023894.t1 MTR_8g009080 31.915 282 157 11 30 295 118 380 5.89e-29 115
MS.gene023894.t1 MTR_1g086550 30.363 303 181 9 11 292 20 313 7.75e-29 114
MS.gene023894.t1 MTR_1g070120 28.125 288 195 6 11 292 38 319 2.20e-28 112
MS.gene023894.t1 MTR_4g123020 29.310 290 193 7 11 294 20 303 2.59e-28 112
MS.gene023894.t1 MTR_8g024120 28.966 290 180 10 11 287 42 318 2.71e-28 112
MS.gene023894.t1 MTR_2g083000 31.273 275 156 10 10 269 32 288 3.86e-28 111
MS.gene023894.t1 MTR_3g108520 28.834 326 206 7 7 317 3 317 9.87e-28 110
MS.gene023894.t1 MTR_8g064200 32.281 285 167 13 1 272 42 313 1.46e-27 110
MS.gene023894.t1 MTR_8g064200 32.281 285 167 13 1 272 47 318 1.83e-27 110
MS.gene023894.t1 MTR_4g100600 27.000 300 200 9 11 296 9 303 1.99e-27 109
MS.gene023894.t1 MTR_2g069090 29.316 307 176 12 11 295 68 355 2.05e-27 110
MS.gene023894.t1 MTR_2g068960 30.868 311 171 10 11 296 63 354 2.08e-27 110
MS.gene023894.t1 MTR_3g045230 30.375 293 185 6 11 295 56 337 2.36e-27 110
MS.gene023894.t1 MTR_2g069060 28.939 311 181 10 2 292 40 330 2.52e-27 109
MS.gene023894.t1 MTR_2g019370 29.022 317 192 12 11 306 28 332 2.62e-27 109
MS.gene023894.t1 MTR_4g015790 26.073 303 203 8 4 292 55 350 2.83e-27 110
MS.gene023894.t1 MTR_8g102600 25.155 322 205 8 5 299 6 318 3.99e-27 108
MS.gene023894.t1 MTR_5g048470 32.155 283 170 12 1 272 43 314 4.70e-27 109
MS.gene023894.t1 MTR_8g009110 28.617 311 193 12 3 297 53 350 5.10e-27 109
MS.gene023894.t1 MTR_5g055680 29.139 302 196 10 2 294 38 330 6.98e-27 108
MS.gene023894.t1 MTR_5g059130 29.900 301 178 9 10 293 43 327 9.14e-27 108
MS.gene023894.t1 MTR_5g024940 26.936 297 185 7 11 304 6 273 1.03e-26 107
MS.gene023894.t1 MTR_5g055690 28.289 304 199 10 1 294 37 331 1.05e-26 108
MS.gene023894.t1 MTR_4g087130 27.815 302 186 8 11 287 26 320 2.95e-26 107
MS.gene023894.t1 MTR_2g069190 29.139 302 182 10 11 295 68 354 4.31e-26 107
MS.gene023894.t1 MTR_1g070080 29.352 293 189 8 11 294 38 321 4.40e-26 106
MS.gene023894.t1 MTR_3g091350 28.750 320 200 10 9 312 57 364 4.91e-26 106
MS.gene023894.t1 MTR_5g065010 27.869 305 198 9 11 303 39 333 8.23e-26 105
MS.gene023894.t1 MTR_3g464530 30.794 315 174 13 11 310 34 319 8.53e-26 105
MS.gene023894.t1 MTR_4g021360 26.625 323 198 9 10 308 6 313 8.82e-26 105
MS.gene023894.t1 MTR_5g048550 27.483 302 197 10 4 294 40 330 1.39e-25 105
MS.gene023894.t1 MTR_3g070860 30.451 266 161 10 11 261 50 306 1.54e-25 105
MS.gene023894.t1 MTR_7g062600 29.352 293 194 9 9 294 49 335 2.31e-25 104
MS.gene023894.t1 MTR_3g043900 29.492 295 184 8 11 295 56 336 3.01e-25 104
MS.gene023894.t1 MTR_8g028435 28.763 299 192 8 11 297 60 349 3.23e-25 104
MS.gene023894.t1 MTR_7g102720 28.710 310 172 9 7 293 33 316 3.80e-25 103
MS.gene023894.t1 MTR_8g075890 28.244 262 170 6 10 260 38 292 4.41e-25 103
MS.gene023894.t1 MTR_0328s0030 28.947 304 196 10 1 294 35 328 5.48e-25 103
MS.gene023894.t1 MTR_7g068650 26.752 314 184 10 8 296 51 343 6.37e-25 103
MS.gene023894.t1 MTR_3g092890 26.224 286 201 6 11 292 38 317 8.72e-25 102
MS.gene023894.t1 MTR_2g068950 28.750 320 184 10 2 296 54 354 8.98e-25 103
MS.gene023894.t1 MTR_5g048850 27.723 303 197 11 2 293 38 329 1.01e-24 102
MS.gene023894.t1 MTR_2g437380 26.557 305 199 10 5 294 44 338 1.64e-24 102
MS.gene023894.t1 MTR_0009s0480 30.483 269 169 9 1 260 36 295 1.89e-24 102
MS.gene023894.t1 MTR_2g072890 27.213 305 202 10 1 294 42 337 1.92e-24 102
MS.gene023894.t1 MTR_6g015950 27.740 292 188 8 5 285 33 312 2.43e-24 101
MS.gene023894.t1 MTR_7g045650 30.328 244 154 8 10 245 59 294 2.71e-24 101
MS.gene023894.t1 MTR_5g048740 30.597 268 171 9 1 260 35 295 3.44e-24 101
MS.gene023894.t1 MTR_8g093980 31.868 182 118 4 121 301 180 356 4.27e-24 101
MS.gene023894.t1 MTR_5g055900 26.821 302 203 9 2 294 38 330 4.47e-24 100
MS.gene023894.t1 MTR_3g072820 29.010 293 195 8 7 292 38 324 5.23e-24 100
MS.gene023894.t1 MTR_2g069010 28.483 323 193 11 2 302 60 366 6.02e-24 100
MS.gene023894.t1 MTR_8g008930 28.664 307 179 13 11 295 60 348 6.73e-24 100
MS.gene023894.t1 MTR_1g011600 28.523 298 188 9 11 290 8 298 8.44e-24 99.4
MS.gene023894.t1 MTR_2g068840 29.054 296 191 9 10 293 54 342 1.26e-23 100
MS.gene023894.t1 MTR_2g025120 27.000 300 185 13 12 295 5 286 1.84e-23 98.6
MS.gene023894.t1 MTR_5g082750 29.474 285 171 11 11 274 49 324 1.86e-23 99.4
MS.gene023894.t1 MTR_5g085330 27.365 296 191 10 12 295 6 289 2.90e-23 98.2
MS.gene023894.t1 MTR_5g055820 27.124 306 198 12 1 293 37 330 2.98e-23 98.6
MS.gene023894.t1 MTR_8g009090 27.517 298 193 9 11 295 60 347 3.10e-23 99.0
MS.gene023894.t1 MTR_7g063730 26.710 307 191 9 9 298 62 351 3.49e-23 99.0
MS.gene023894.t1 MTR_4g096840 26.689 296 192 10 11 292 29 313 4.16e-23 97.8
MS.gene023894.t1 MTR_3g091360 27.152 302 201 6 9 300 50 342 4.36e-23 98.2
MS.gene023894.t1 MTR_3g117420 28.571 315 194 14 5 301 46 347 4.79e-23 98.2
MS.gene023894.t1 MTR_0032s0040 27.632 304 190 11 11 298 70 359 5.70e-23 98.2
MS.gene023894.t1 MTR_2g033270 25.667 300 191 8 10 294 18 300 5.84e-23 97.4
MS.gene023894.t1 MTR_5g032880 26.712 292 190 9 11 287 376 658 1.54e-22 98.6
MS.gene023894.t1 MTR_5g032880 25.086 291 202 8 11 294 38 319 9.43e-22 96.3
MS.gene023894.t1 MTR_3g026150 28.904 301 176 14 11 292 60 341 1.55e-22 96.7
MS.gene023894.t1 MTR_1g093110 29.260 311 183 11 3 293 62 355 1.61e-22 97.1
MS.gene023894.t1 MTR_1g070085 27.304 293 194 7 11 293 37 320 1.70e-22 96.7
MS.gene023894.t1 MTR_1g070085 27.304 293 194 7 11 293 37 320 1.70e-22 96.7
MS.gene023894.t1 MTR_7g056347 27.303 304 196 11 7 295 63 356 2.01e-22 96.7
MS.gene023894.t1 MTR_2g069020 28.615 325 187 12 2 302 58 361 2.03e-22 96.7
MS.gene023894.t1 MTR_2g069020 28.483 323 190 11 2 302 58 361 2.08e-22 97.1
MS.gene023894.t1 MTR_8g009160 26.557 305 202 10 3 295 53 347 2.16e-22 96.7
MS.gene023894.t1 MTR_5g032870 26.490 302 192 8 2 285 29 318 2.24e-22 96.3
MS.gene023894.t1 MTR_1g070135 25.253 297 198 7 8 292 35 319 2.72e-22 95.9
MS.gene023894.t1 MTR_3g058610 24.691 324 223 8 10 320 38 353 2.97e-22 95.9
MS.gene023894.t1 MTR_5g059140 29.057 265 161 8 11 260 42 294 3.10e-22 95.5
MS.gene023894.t1 MTR_3g083370 26.224 286 178 11 23 295 19 284 3.37e-22 95.1
MS.gene023894.t1 MTR_5g025060 25.667 300 165 7 11 298 6 259 3.91e-22 94.4
MS.gene023894.t1 MTR_4g100590 25.667 300 199 10 11 296 9 298 4.28e-22 94.7
MS.gene023894.t1 MTR_2g072910 29.562 274 169 10 1 261 41 303 4.75e-22 95.5
MS.gene023894.t1 MTR_1g093120 30.519 308 166 13 3 285 59 343 5.37e-22 95.5
MS.gene023894.t1 MTR_8g461330 29.900 301 186 11 9 294 25 315 5.59e-22 95.1
MS.gene023894.t1 MTR_5g048570 25.581 301 202 11 5 294 39 328 6.21e-22 95.1
MS.gene023894.t1 MTR_5g022020 28.033 239 159 5 28 260 61 292 1.12e-21 94.4
MS.gene023894.t1 MTR_1g093140 29.568 301 178 14 4 285 66 351 1.70e-21 94.0
MS.gene023894.t1 MTR_1g033810 28.623 276 175 9 1 264 37 302 2.91e-21 93.2
MS.gene023894.t1 MTR_7g016090 27.985 268 173 8 11 269 41 297 3.13e-21 92.8
MS.gene023894.t1 MTR_7g016090 27.985 268 173 8 11 269 39 295 3.18e-21 92.8
MS.gene023894.t1 MTR_4g117880 27.389 314 186 12 11 301 60 354 3.26e-21 93.2
MS.gene023894.t1 MTR_3g088565 25.597 293 200 9 11 293 3 287 3.27e-21 92.4
MS.gene023894.t1 MTR_1g032140 27.632 304 184 9 7 293 62 346 3.74e-21 93.2
MS.gene023894.t1 MTR_2g069210 28.727 275 175 9 30 295 88 350 4.13e-21 92.8
MS.gene023894.t1 MTR_4g011720 29.832 238 149 6 26 251 31 262 4.47e-21 91.3
MS.gene023894.t1 MTR_5g055800 27.778 324 169 11 2 293 38 328 6.15e-21 92.0
MS.gene023894.t1 MTR_8g009170 26.174 298 198 9 11 295 60 348 9.21e-21 92.0
MS.gene023894.t1 MTR_4g024660 29.286 280 155 9 3 261 59 316 9.57e-21 92.0
MS.gene023894.t1 MTR_8g041620 29.091 275 160 10 5 261 62 319 1.13e-20 91.7
MS.gene023894.t1 MTR_4g116010 30.822 292 181 9 4 285 43 323 4.97e-20 89.7
MS.gene023894.t1 MTR_8g063070 27.652 264 180 6 3 261 59 316 5.06e-20 89.7
MS.gene023894.t1 MTR_1g043810 26.846 298 190 9 3 285 46 330 7.50e-20 89.4
MS.gene023894.t1 MTR_8g062600 28.195 266 168 9 7 261 63 316 8.30e-20 89.4
MS.gene023894.t1 MTR_3g063180 26.000 300 201 9 9 293 40 333 1.10e-19 88.6
MS.gene023894.t1 MTR_1g070185 28.947 304 171 11 11 293 69 348 1.32e-19 88.6
MS.gene023894.t1 MTR_8g102600 25.556 270 165 8 57 299 8 268 1.45e-19 87.0
MS.gene023894.t1 MTR_7g029655 27.626 257 171 8 11 261 67 314 1.46e-19 88.6
MS.gene023894.t1 MTR_1g062110 24.606 317 207 9 6 303 61 364 1.77e-19 88.6
MS.gene023894.t1 MTR_8g074070 27.302 315 198 13 5 301 46 347 3.53e-19 87.4
MS.gene023894.t1 MTR_3g117485 27.119 295 193 10 5 285 43 329 3.67e-19 87.0
MS.gene023894.t1 MTR_8g469400 29.299 314 168 14 3 293 59 341 4.23e-19 87.0
MS.gene023894.t1 MTR_2g068800 26.908 249 150 5 10 249 54 279 5.04e-19 85.9
MS.gene023894.t1 MTR_8g041600 27.698 278 160 12 5 261 62 319 5.45e-19 87.0
MS.gene023894.t1 MTR_7g081710 24.359 312 203 9 11 304 49 345 7.17e-19 86.3
MS.gene023894.t1 MTR_1g032250 35.211 142 84 5 156 293 216 353 7.99e-19 86.3
MS.gene023894.t1 MTR_7g102820 25.246 305 190 9 5 284 61 352 9.49e-19 86.3
MS.gene023894.t1 MTR_0009s0480 29.339 242 153 9 1 233 36 268 1.58e-18 84.3
MS.gene023894.t1 MTR_1g043770 27.864 323 185 12 3 299 45 345 1.71e-18 85.5
MS.gene023894.t1 MTR_2g069300 26.948 308 182 13 11 295 54 341 2.24e-18 85.1
MS.gene023894.t1 MTR_1g043775 27.961 304 179 11 3 285 46 330 2.40e-18 85.1
MS.gene023894.t1 MTR_7g105070 27.622 286 154 12 1 260 49 307 2.47e-18 85.1
MS.gene023894.t1 MTR_6g035160 35.036 137 85 3 160 295 29 162 2.64e-18 81.6
MS.gene023894.t1 MTR_5g011250 22.727 330 207 8 4 303 40 351 2.77e-18 84.7
MS.gene023894.t1 MTR_2g069060 28.405 257 149 8 2 241 18 256 2.84e-18 83.2
MS.gene023894.t1 MTR_5g055690 28.395 243 155 10 1 233 37 270 2.96e-18 83.6
MS.gene023894.t1 MTR_0009s0050 32.967 182 113 5 119 294 54 232 5.64e-18 82.4
MS.gene023894.t1 MTR_8g074050 27.500 320 192 12 5 303 46 346 6.18e-18 83.6
MS.gene023894.t1 MTR_3g040440 50.746 67 32 1 183 249 16 81 6.40e-18 82.4
MS.gene023894.t1 MTR_0009s0050 32.967 182 113 5 119 294 54 232 6.68e-18 82.0
MS.gene023894.t1 MTR_0009s0050 34.641 153 96 3 143 294 1 150 1.15e-17 79.7
MS.gene023894.t1 MTR_3g072810 26.978 278 182 6 30 295 58 326 1.25e-17 82.4
MS.gene023894.t1 MTR_8g009120 27.451 306 187 10 3 295 53 336 1.34e-17 82.8
MS.gene023894.t1 MTR_1g043760 26.621 293 180 11 11 285 54 329 3.51e-17 81.6
MS.gene023894.t1 MTR_5g048850 27.459 244 153 12 2 233 38 269 4.04e-17 80.5
MS.gene023894.t1 MTR_1g032220 38.053 113 67 3 183 293 242 353 6.30e-17 80.9
MS.gene023894.t1 MTR_8g009180 37.692 130 76 4 177 302 157 285 7.14e-17 79.7
MS.gene023894.t1 MTR_4g132770 33.083 133 83 4 166 295 28 157 1.08e-16 76.6
MS.gene023894.t1 MTR_0056s0160 36.184 152 89 5 111 260 36 181 1.50e-16 78.2
MS.gene023894.t1 MTR_1g048940 24.183 306 209 9 8 300 42 337 1.57e-16 79.7
MS.gene023894.t1 MTR_1g070110 39.831 118 65 2 182 294 100 216 1.59e-16 77.8
MS.gene023894.t1 MTR_2g025120 26.695 236 142 11 12 233 5 223 1.95e-16 77.4
MS.gene023894.t1 MTR_7g016080 24.549 277 176 10 7 272 37 291 2.15e-16 79.0
MS.gene023894.t1 MTR_3g117485 27.059 255 172 8 38 285 10 257 2.22e-16 78.2
MS.gene023894.t1 MTR_0009s0400 37.815 119 72 2 177 294 9 126 3.29e-16 75.1
MS.gene023894.t1 MTR_7g062560 24.399 291 200 9 9 294 60 335 4.09e-16 78.6
MS.gene023894.t1 MTR_3g026150 28.497 193 114 8 111 293 61 239 7.33e-16 76.3
MS.gene023894.t1 MTR_3g464530 31.092 238 130 11 11 233 34 252 1.04e-15 75.9
MS.gene023894.t1 MTR_2g072910 28.514 249 154 10 1 236 41 278 1.21e-15 76.3
MS.gene023894.t1 MTR_2g437380 25.292 257 173 9 53 300 4 250 2.67e-15 75.1
MS.gene023894.t1 MTR_1g043840 35.714 140 85 3 122 261 51 185 5.92e-15 75.1
MS.gene023894.t1 MTR_1g070135 24.370 238 156 7 8 233 35 260 4.75e-14 71.6
MS.gene023894.t1 MTR_8g006930 28.758 306 193 10 3 293 59 354 5.19e-14 72.4
MS.gene023894.t1 MTR_1g027290 28.796 191 125 5 117 302 144 328 5.31e-14 72.0
MS.gene023894.t1 MTR_3g026150 29.167 240 136 11 11 233 60 282 1.14e-13 70.5
MS.gene023894.t1 MTR_3g083370 24.215 223 139 9 23 233 19 223 1.69e-13 69.3
MS.gene023894.t1 MTR_1g043810 26.337 243 154 7 3 233 46 275 1.92e-13 70.5
MS.gene023894.t1 MTR_8g009170 26.180 233 153 7 11 233 60 283 2.18e-13 70.1
MS.gene023894.t1 MTR_1g070100 28.249 177 122 3 111 287 61 232 2.92e-13 68.9
MS.gene023894.t1 MTR_7g056393 27.778 306 200 10 3 295 59 356 3.43e-13 70.1
MS.gene023894.t1 MTR_1g070085 28.249 177 122 3 111 287 65 236 3.81e-13 68.9
MS.gene023894.t1 MTR_7g056353 40.367 109 58 3 183 285 213 320 5.09e-13 69.7
MS.gene023894.t1 MTR_7g078010 28.105 306 191 9 5 293 61 354 9.42e-13 68.6
MS.gene023894.t1 MTR_4g100600 24.889 225 151 8 11 221 9 229 1.30e-12 66.6
MS.gene023894.t1 MTR_1g043770 28.685 251 137 9 3 233 45 273 1.88e-12 67.0
MS.gene023894.t1 MTR_4g115990 27.972 286 178 9 5 285 40 302 2.17e-12 67.4
MS.gene023894.t1 MTR_4g100590 24.710 259 171 10 52 296 3 251 2.77e-12 66.2
MS.gene023894.t1 MTR_8g074070 31.746 126 82 3 179 301 204 328 6.03e-12 65.9
MS.gene023894.t1 MTR_4g119410 27.124 306 198 8 3 293 59 354 7.78e-12 65.9
MS.gene023894.t1 MTR_8g009150 30.534 131 74 3 182 295 198 328 9.11e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023894.t1 AT4G23340 57.407 324 130 4 2 321 1 320 2.91e-130 374
MS.gene023894.t1 AT5G51310 53.727 322 131 6 10 317 4 321 9.62e-119 345
MS.gene023894.t1 AT4G23340 64.356 202 69 2 123 321 1 202 3.30e-92 273
MS.gene023894.t1 AT1G80330 34.576 295 178 7 11 296 49 337 2.30e-45 158
MS.gene023894.t1 AT4G25420 33.333 309 183 8 10 302 60 361 8.76e-41 146
MS.gene023894.t1 AT1G55290 33.437 323 184 9 7 317 58 361 1.77e-39 142
MS.gene023894.t1 AT3G19010 28.528 326 205 9 10 314 27 345 2.30e-36 134
MS.gene023894.t1 AT3G19010 28.528 326 205 9 10 314 27 345 2.30e-36 134
MS.gene023894.t1 AT5G07200 30.225 311 194 9 10 302 57 362 6.28e-36 133
MS.gene023894.t1 AT1G52820 30.075 266 181 3 30 295 38 298 1.15e-35 131
MS.gene023894.t1 AT4G21200 32.472 271 161 9 8 269 39 296 1.20e-35 132
MS.gene023894.t1 AT5G51810 31.013 316 194 10 4 302 51 359 2.25e-35 132
MS.gene023894.t1 AT3G13610 32.653 294 178 7 11 295 62 344 6.80e-35 130
MS.gene023894.t1 AT1G44090 30.380 316 198 9 2 301 54 363 7.03e-34 128
MS.gene023894.t1 AT1G15550 28.571 301 206 4 3 299 49 344 1.83e-33 126
MS.gene023894.t1 AT1G60980 30.449 312 189 9 10 302 56 358 1.45e-32 124
MS.gene023894.t1 AT1G50960 29.936 314 193 9 7 310 36 332 1.41e-31 121
MS.gene023894.t1 AT1G80340 28.713 303 207 4 1 299 40 337 6.04e-31 119
MS.gene023894.t1 AT1G52800 26.183 317 216 7 9 317 8 314 1.28e-30 118
MS.gene023894.t1 AT3G19000 29.063 320 195 9 10 307 31 340 4.39e-30 117
MS.gene023894.t1 AT1G78550 28.525 305 194 10 1 292 43 336 8.48e-30 116
MS.gene023894.t1 AT1G30040 28.897 263 168 8 7 260 28 280 8.77e-30 116
MS.gene023894.t1 AT5G58660 30.249 281 153 10 11 260 34 302 1.69e-28 113
MS.gene023894.t1 AT4G21690 31.461 267 159 9 9 260 45 302 1.31e-27 110
MS.gene023894.t1 AT2G38240 28.425 292 197 7 3 287 40 326 4.13e-27 109
MS.gene023894.t1 AT5G24530 29.450 309 187 9 2 294 29 322 4.42e-27 108
MS.gene023894.t1 AT1G78440 28.814 295 187 7 11 292 18 302 7.05e-27 108
MS.gene023894.t1 AT3G21420 29.000 300 189 10 8 292 52 342 8.80e-27 108
MS.gene023894.t1 AT2G34555 28.740 254 172 5 11 260 27 275 8.86e-27 108
MS.gene023894.t1 AT1G14120 30.389 283 178 8 11 287 8 277 9.43e-27 107
MS.gene023894.t1 AT1G14120 30.389 283 178 8 11 287 8 277 9.43e-27 107
MS.gene023894.t1 AT1G14120 30.389 283 178 8 11 287 8 277 9.43e-27 107
MS.gene023894.t1 AT1G17020 29.811 265 162 10 10 260 52 306 1.51e-26 107
MS.gene023894.t1 AT1G80320 28.383 303 204 6 4 298 2 299 1.63e-26 107
MS.gene023894.t1 AT3G12900 31.618 272 170 7 28 293 76 337 1.73e-26 107
MS.gene023894.t1 AT4G25300 30.370 270 165 10 4 260 45 304 2.50e-26 107
MS.gene023894.t1 AT5G08640 28.374 289 194 8 11 292 43 325 2.92e-26 106
MS.gene023894.t1 AT5G08640 28.374 289 194 8 11 292 43 325 2.92e-26 106
MS.gene023894.t1 AT5G05600 28.115 313 206 10 4 303 55 361 3.05e-26 107
MS.gene023894.t1 AT5G63600 26.871 294 197 9 7 293 29 311 7.15e-26 105
MS.gene023894.t1 AT1G52790 29.536 237 159 5 60 295 62 291 1.04e-25 104
MS.gene023894.t1 AT5G63600 26.621 293 198 8 7 293 29 310 1.63e-25 104
MS.gene023894.t1 AT1G14130 28.826 281 185 7 11 287 9 278 1.67e-25 104
MS.gene023894.t1 AT4G03070 28.155 309 202 8 10 306 13 313 1.88e-25 104
MS.gene023894.t1 AT3G19010 25.617 324 187 9 10 314 27 315 2.89e-25 103
MS.gene023894.t1 AT3G55970 30.189 265 165 8 11 261 52 310 3.54e-25 104
MS.gene023894.t1 AT1G17010 27.632 304 195 10 4 293 47 339 4.39e-25 103
MS.gene023894.t1 AT1G05010 29.801 302 178 13 12 295 5 290 5.71e-25 103
MS.gene023894.t1 AT3G51240 26.718 262 174 6 10 260 37 291 1.24e-24 102
MS.gene023894.t1 AT1G30040 28.814 236 149 8 7 233 28 253 2.03e-24 100
MS.gene023894.t1 AT4G25420 33.051 236 135 8 10 229 60 288 2.10e-24 100
MS.gene023894.t1 AT3G47190 29.450 309 162 13 4 287 25 302 4.89e-24 100
MS.gene023894.t1 AT3G46500 25.407 307 201 10 9 296 15 312 5.93e-24 100
MS.gene023894.t1 AT3G11180 28.479 309 192 11 11 303 95 390 1.37e-23 100
MS.gene023894.t1 AT3G50210 27.703 296 168 10 1 261 1 285 4.19e-23 98.2
MS.gene023894.t1 AT3G50210 27.703 296 168 10 1 261 1 285 4.19e-23 98.2
MS.gene023894.t1 AT3G50210 27.703 296 168 10 1 261 1 285 4.19e-23 98.2
MS.gene023894.t1 AT2G30830 31.058 293 177 10 7 285 50 331 4.23e-23 98.6
MS.gene023894.t1 AT1G47990 26.966 267 165 6 10 260 14 266 4.65e-23 97.8
MS.gene023894.t1 AT1G62380 27.425 299 182 14 12 295 8 286 4.91e-23 97.8
MS.gene023894.t1 AT5G63590 28.383 303 192 9 7 296 10 300 5.49e-23 97.4
MS.gene023894.t1 AT3G11180 28.333 300 187 10 11 295 95 381 7.99e-23 98.2
MS.gene023894.t1 AT5G58660 28.968 252 137 9 11 232 34 273 1.49e-22 95.5
MS.gene023894.t1 AT1G12010 26.510 298 186 14 12 295 8 286 1.73e-22 96.3
MS.gene023894.t1 AT1G02400 28.571 315 179 10 5 294 18 311 3.99e-22 95.1
MS.gene023894.t1 AT3G19010 27.755 245 149 9 10 233 27 264 4.01e-22 94.7
MS.gene023894.t1 AT1G06620 27.243 301 201 8 5 295 56 348 4.09e-22 95.9
MS.gene023894.t1 AT1G03410 29.455 275 167 10 31 292 82 342 4.95e-22 95.5
MS.gene023894.t1 AT1G03410 30.224 268 160 10 31 285 119 372 9.13e-22 95.1
MS.gene023894.t1 AT5G59540 28.713 303 198 8 3 294 53 348 9.92e-22 94.7
MS.gene023894.t1 AT3G61400 26.298 289 195 6 11 285 60 344 1.12e-21 94.7
MS.gene023894.t1 AT5G51810 30.400 250 150 10 4 236 51 293 1.36e-21 93.2
MS.gene023894.t1 AT5G43440 29.195 298 181 10 11 292 62 345 1.45e-21 94.4
MS.gene023894.t1 AT5G20400 28.339 307 196 12 10 301 44 341 2.01e-21 93.6
MS.gene023894.t1 AT1G77330 26.316 304 193 12 11 298 3 291 2.36e-21 92.8
MS.gene023894.t1 AT1G52820 28.713 202 139 3 30 231 38 234 2.60e-21 91.7
MS.gene023894.t1 AT4G10490 27.211 294 196 10 11 294 42 327 4.69e-21 92.4
MS.gene023894.t1 AT2G36690 26.117 291 184 9 10 284 60 335 1.06e-20 91.7
MS.gene023894.t1 AT2G36690 26.117 291 184 9 10 284 60 335 1.06e-20 91.7
MS.gene023894.t1 AT5G43450 27.885 312 165 12 11 292 61 342 1.82e-20 91.3
MS.gene023894.t1 AT1G78550 27.170 265 173 9 37 292 5 258 1.83e-20 89.7
MS.gene023894.t1 AT1G03400 29.278 263 160 9 8 261 53 298 1.84e-20 90.9
MS.gene023894.t1 AT1G06650 28.309 272 181 7 30 295 89 352 3.14e-20 90.5
MS.gene023894.t1 AT4G25310 29.918 244 139 12 31 260 76 301 3.42e-20 90.1
MS.gene023894.t1 AT3G19000 26.939 245 150 8 10 232 31 268 4.67e-20 88.6
MS.gene023894.t1 AT3G49620 27.907 301 157 13 1 261 26 306 4.73e-20 89.7
MS.gene023894.t1 AT2G30840 28.819 288 186 9 13 292 66 342 5.43e-20 89.7
MS.gene023894.t1 AT3G46500 25.092 271 175 10 9 260 15 276 5.48e-20 89.0
MS.gene023894.t1 AT4G10500 26.263 297 184 11 11 288 44 324 6.14e-20 89.4
MS.gene023894.t1 AT5G12270 28.716 296 195 8 9 295 54 342 6.28e-20 89.4
MS.gene023894.t1 AT5G63595 28.016 257 150 8 7 256 21 249 9.74e-20 87.8
MS.gene023894.t1 AT5G54000 28.772 285 189 8 10 285 45 324 1.03e-19 89.0
MS.gene023894.t1 AT5G43935 26.510 298 173 8 10 293 18 283 1.13e-19 87.8
MS.gene023894.t1 AT5G59530 27.483 302 196 11 5 292 52 344 1.43e-19 88.6
MS.gene023894.t1 AT3G49630 26.939 245 162 6 30 261 41 281 1.75e-19 87.8
MS.gene023894.t1 AT3G49630 26.939 245 162 6 30 261 37 277 1.76e-19 87.8
MS.gene023894.t1 AT5G20550 28.720 289 187 10 10 286 44 325 2.16e-19 87.8
MS.gene023894.t1 AT1G04380 27.090 299 187 9 11 294 45 327 3.16e-19 87.4
MS.gene023894.t1 AT1G35190 25.589 297 187 9 14 296 15 291 3.59e-19 86.7
MS.gene023894.t1 AT1G06640 28.832 274 177 9 30 295 89 352 1.46e-18 85.9
MS.gene023894.t1 AT1G35190 24.918 305 202 10 14 296 15 314 2.03e-18 84.7
MS.gene023894.t1 AT2G44800 25.987 304 206 9 7 300 48 342 4.18e-18 84.3
MS.gene023894.t1 AT1G04350 26.255 259 182 5 31 285 80 333 8.75e-18 83.6
MS.gene023894.t1 AT4G03050 36.496 137 83 3 183 318 275 408 9.04e-18 84.0
MS.gene023894.t1 AT4G03050 36.496 137 83 3 183 318 275 408 9.04e-18 84.0
MS.gene023894.t1 AT1G49390 28.070 285 191 8 10 285 44 323 2.09e-17 82.0
MS.gene023894.t1 AT3G60290 23.548 310 198 7 11 300 52 342 3.27e-17 81.6
MS.gene023894.t1 AT1G28030 26.797 306 204 9 3 295 5 303 3.68e-17 81.3
MS.gene023894.t1 AT1G06645 27.206 272 181 9 30 295 102 362 4.91e-17 81.3
MS.gene023894.t1 AT3G51240 27.570 214 142 5 53 260 1 207 1.42e-16 79.0
MS.gene023894.t1 AT5G07480 25.623 281 190 7 31 300 69 341 1.96e-16 79.3
MS.gene023894.t1 AT3G55970 27.848 237 151 8 11 233 52 282 2.32e-16 78.6
MS.gene023894.t1 AT2G19590 28.431 306 183 14 10 302 10 292 3.65e-16 78.2
MS.gene023894.t1 AT5G54000 28.629 248 170 6 41 285 1 244 4.26e-16 77.4
MS.gene023894.t1 AT5G63580 26.991 226 158 4 11 233 19 240 7.50e-16 76.3
MS.gene023894.t1 AT3G61400 25.322 233 160 4 11 233 60 288 9.78e-16 76.6
MS.gene023894.t1 AT5G05600 26.446 242 160 9 4 233 55 290 1.46e-15 76.3
MS.gene023894.t1 AT4G16765 26.882 186 124 4 122 296 55 239 1.47e-15 75.5
MS.gene023894.t1 AT4G16765 26.882 186 124 4 122 296 55 239 1.47e-15 75.5
MS.gene023894.t1 AT4G16765 26.882 186 124 4 122 296 55 239 1.47e-15 75.5
MS.gene023894.t1 AT5G63580 26.786 224 157 4 11 231 19 238 3.00e-15 74.3
MS.gene023894.t1 AT4G25300 34.483 145 86 5 119 260 72 210 3.07e-15 74.7
MS.gene023894.t1 AT4G22880 25.256 293 198 9 9 286 45 331 3.60e-15 75.9
MS.gene023894.t1 AT4G22880 25.256 293 198 9 9 286 45 331 3.60e-15 75.9
MS.gene023894.t1 AT4G22880 25.256 293 198 9 9 286 45 331 3.60e-15 75.9
MS.gene023894.t1 AT3G46500 25.114 219 142 7 99 301 31 243 6.23e-15 73.9
MS.gene023894.t1 AT3G46500 25.114 219 142 7 99 301 31 243 6.23e-15 73.9
MS.gene023894.t1 AT2G25450 26.389 288 190 7 11 285 55 333 7.45e-15 74.7
MS.gene023894.t1 AT5G43440 29.583 240 142 9 11 237 62 287 7.97e-15 73.9
MS.gene023894.t1 AT1G02400 27.059 255 143 8 5 236 18 252 1.07e-14 73.2
MS.gene023894.t1 AT3G46500 27.273 187 122 6 123 301 1 181 1.11e-14 71.6
MS.gene023894.t1 AT1G06620 27.731 238 153 8 5 233 56 283 1.33e-14 73.2
MS.gene023894.t1 AT4G16765 30.000 150 93 4 122 260 55 203 1.67e-14 72.4
MS.gene023894.t1 AT1G15540 26.623 308 197 12 10 300 11 306 2.06e-14 73.2
MS.gene023894.t1 AT1G15540 26.623 308 197 12 10 300 8 303 2.08e-14 73.2
MS.gene023894.t1 AT1G15540 26.623 308 197 12 10 300 8 303 2.08e-14 73.2
MS.gene023894.t1 AT1G15540 26.623 308 197 12 10 300 15 310 2.33e-14 73.2
MS.gene023894.t1 AT3G50210 31.818 154 99 4 112 261 52 203 8.22e-14 70.5
MS.gene023894.t1 AT4G25310 26.582 237 128 10 31 260 76 273 9.30e-14 71.2
MS.gene023894.t1 AT1G49390 28.226 248 171 6 41 285 1 244 1.57e-13 70.1
MS.gene023894.t1 AT3G49630 33.562 146 85 4 124 261 67 208 1.74e-13 69.7
MS.gene023894.t1 AT4G16765 30.952 126 82 2 175 296 69 193 1.25e-12 66.2
MS.gene023894.t1 AT5G07480 28.261 184 121 5 123 300 54 232 3.40e-12 65.9
MS.gene023894.t1 AT4G16770 24.670 227 153 5 10 221 21 244 9.90e-12 64.7
MS.gene023894.t1 AT1G52810 22.034 295 186 7 10 295 11 270 2.77e-11 63.5
MS.gene023894.t1 AT2G19590 27.372 274 168 12 38 302 26 277 4.02e-11 63.2
MS.gene023894.t1 AT3G46500 25.281 178 111 7 99 260 31 202 4.34e-11 62.4

Find 54 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAAACTTTGCTTGCTTTA+AGG 0.001962 7.1:+26022490 None:intergenic
TTTGAGAGCCTAAGAGTTAA+TGG 0.172674 7.1:-26022306 MS.gene023894:CDS
TGAGGATGAAAAGGTAATTT+TGG 0.185599 7.1:-26021427 MS.gene023894:CDS
TCCTTAAAGCAAGCAAAGTT+TGG 0.229737 7.1:-26022491 MS.gene023894:CDS
AAGCTTGTATTGATGAGTTT+AGG 0.258602 7.1:-26021801 MS.gene023894:CDS
AAGCTGACTGCAAAGTTCTT+TGG 0.262298 7.1:+26022437 None:intergenic
TGGAATTTCAGCATGAGATT+TGG 0.292777 7.1:+26022560 None:intergenic
TGAGATCAAATGAAGGAAAA+TGG 0.294877 7.1:-26021599 MS.gene023894:CDS
AGTTAGGTCCATTAACTCTT+AGG 0.300447 7.1:+26022298 None:intergenic
AGCTTGTATTGATGAGTTTA+GGG 0.305345 7.1:-26021800 MS.gene023894:CDS
GTATAAACCATTTGTGTGTT+TGG 0.310267 7.1:-26021367 MS.gene023894:CDS
ACAACTAGTGTTCCCTCATT+TGG 0.311556 7.1:+26021564 None:intergenic
CCTTAAAGCAAGCAAAGTTT+GGG 0.324831 7.1:-26022490 MS.gene023894:CDS
ACAAACAGGATTCCAAATTC+AGG 0.335483 7.1:-26022236 MS.gene023894:intron
TTACTCTTGTCAAGAAATAA+TGG 0.352439 7.1:-26021709 MS.gene023894:CDS
TTTCAGAAGGGAGGCTGAAT+AGG 0.357914 7.1:+26022397 None:intergenic
AGAAATCCTCTTTGACAAAC+AGG 0.361377 7.1:-26022250 MS.gene023894:CDS
GGAACACTAGTTGTGAATAT+TGG 0.366651 7.1:-26021555 MS.gene023894:CDS
TCTGAAACTAAACTTAGAAT+TGG 0.389583 7.1:-26022381 MS.gene023894:CDS
TTAGCAGAAACATAAAAGTT+AGG 0.409350 7.1:+26022282 None:intergenic
GATGATCAAGTTGAAGGGCT+TGG 0.429653 7.1:-26021684 MS.gene023894:CDS
GAGAGAATAATGAAAGAGGA+AGG 0.434843 7.1:-26021329 MS.gene023894:CDS
TTTGCTTGCTTTAAGGAAAG+TGG 0.440568 7.1:+26022497 None:intergenic
AGTGTGATACTACAAGAATA+TGG 0.447749 7.1:-26021858 MS.gene023894:CDS
AAATAATCCAAACACACAAA+TGG 0.448457 7.1:+26021360 None:intergenic
CCATCACCAACAACTTCATC+AGG 0.451033 7.1:+26021402 None:intergenic
TGGAATCCTGTTTGTCAAAG+AGG 0.468715 7.1:+26022244 None:intergenic
ATGGAAGATGATCAAGTTGA+AGG 0.472644 7.1:-26021690 MS.gene023894:CDS
ACTCTTAGGCTCTCAAAGAA+TGG 0.480140 7.1:+26022312 None:intergenic
TTTAGAGAGAATAATGAAAG+AGG 0.482001 7.1:-26021333 MS.gene023894:CDS
ATTCTAAGTTTAGTTTCAGA+AGG 0.493903 7.1:+26022384 None:intergenic
GATAGATATATGTCCAAATG+AGG 0.514147 7.1:-26021577 MS.gene023894:CDS
AAAGTTCTTTGGAGATTCCA+TGG 0.515956 7.1:+26022448 None:intergenic
AGATTCCATGGTTGATTATG+TGG 0.518398 7.1:+26022460 None:intergenic
ACAAGAATATGGAAATAAGA+TGG 0.519665 7.1:-26021847 MS.gene023894:CDS
TTGGCACCTGATGAAGTTGT+TGG 0.523848 7.1:-26021408 MS.gene023894:CDS
TCTGAGTTTAAGAACTGTCA+TGG 0.528456 7.1:-26021750 MS.gene023894:CDS
AATGGAGAAGCAATGAAATG+AGG 0.543284 7.1:+26022330 None:intergenic
CCTGATGAAGTTGTTGGTGA+TGG 0.546059 7.1:-26021402 MS.gene023894:CDS
TGGAAGATGATCAAGTTGAA+GGG 0.565163 7.1:-26021689 MS.gene023894:CDS
TTGTATCAAGATGAAATTGG+AGG 0.566993 7.1:-26021630 MS.gene023894:CDS
TAAGTTTAGTTTCAGAAGGG+AGG 0.577051 7.1:+26022388 None:intergenic
TTCTAAGTTTAGTTTCAGAA+GGG 0.577834 7.1:+26022385 None:intergenic
TGTATCAAGATGAAATTGGA+GGG 0.579315 7.1:-26021629 MS.gene023894:CDS
AGAACTGTCATGGATACTTG+AGG 0.600309 7.1:-26021740 MS.gene023894:CDS
CTTCAAGTGAGATCAAATGA+AGG 0.602769 7.1:-26021606 MS.gene023894:CDS
TTGGAGATATGCTTCAAGCA+TGG 0.606928 7.1:-26021536 MS.gene023894:CDS
TTGTTGGTGATGGAAATAAG+AGG 0.612274 7.1:-26021392 MS.gene023894:CDS
AGAATATGGAAATAAGATGG+AGG 0.616643 7.1:-26021844 MS.gene023894:CDS
TTCTTCCACATAATCAACCA+TGG 0.622356 7.1:-26022465 MS.gene023894:CDS
GTATTGATGAGTTTAGGGGA+AGG 0.629826 7.1:-26021795 MS.gene023894:CDS
ATAGATATATGTCCAAATGA+GGG 0.637798 7.1:-26021576 MS.gene023894:CDS
CTTAAAGCAAGCAAAGTTTG+GGG 0.645655 7.1:-26022489 MS.gene023894:CDS
GCTTGTATTGATGAGTTTAG+GGG 0.646194 7.1:-26021799 MS.gene023894:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAACACTTATAGAATA+AGG - chr7.1:26021706-26021725 MS.gene023894:CDS 15.0%
!! ATTAAACACTTATAGAATAA+GGG - chr7.1:26021707-26021726 MS.gene023894:CDS 15.0%
!!! TAAGATTTTAAAGATGAAAA+TGG + chr7.1:26021488-26021507 None:intergenic 15.0%
!! CTACTTATATGAAAATAGTT+TGG + chr7.1:26021748-26021767 None:intergenic 20.0%
!!! ATTTTGTATCAAGATGAAAT+TGG - chr7.1:26022209-26022228 MS.gene023894:intron 20.0%
! AAATAATCCAAACACACAAA+TGG + chr7.1:26022485-26022504 None:intergenic 25.0%
! AATATGTTGAAAACAGCTTA+TGG - chr7.1:26021803-26021822 MS.gene023894:CDS 25.0%
! ACAAGAATATGGAAATAAGA+TGG - chr7.1:26021995-26022014 MS.gene023894:intron 25.0%
! ATAGATATATGTCCAAATGA+GGG - chr7.1:26022266-26022285 MS.gene023894:CDS 25.0%
! ATATGTTGAAAACAGCTTAT+GGG - chr7.1:26021804-26021823 MS.gene023894:CDS 25.0%
! TTACTCTTGTCAAGAAATAA+TGG - chr7.1:26022133-26022152 MS.gene023894:intron 25.0%
! TTAGCAGAAACATAAAAGTT+AGG + chr7.1:26021563-26021582 None:intergenic 25.0%
! TTTAGAGAGAATAATGAAAG+AGG - chr7.1:26022509-26022528 MS.gene023894:CDS 25.0%
!! ATTCTAAGTTTAGTTTCAGA+AGG + chr7.1:26021461-26021480 None:intergenic 25.0%
!! TATTGTGTTTTACCTGAATT+TGG + chr7.1:26021621-26021640 None:intergenic 25.0%
!! TCTGAAACTAAACTTAGAAT+TGG - chr7.1:26021461-26021480 MS.gene023894:CDS 25.0%
!! TTCTAAGTTTAGTTTCAGAA+GGG + chr7.1:26021460-26021479 None:intergenic 25.0%
!!! AGCTTCTACTTTTATCAATT+TGG - chr7.1:26021661-26021680 MS.gene023894:CDS 25.0%
!!! GTTTTTGACATGTCTAAAAT+TGG + chr7.1:26021305-26021324 None:intergenic 25.0%
AGAATATGGAAATAAGATGG+AGG - chr7.1:26021998-26022017 MS.gene023894:intron 30.0%
AGTGTGATACTACAAGAATA+TGG - chr7.1:26021984-26022003 MS.gene023894:intron 30.0%
CATTACATAAAAGCAGACAT+AGG + chr7.1:26021921-26021940 None:intergenic 30.0%
GATAGATATATGTCCAAATG+AGG - chr7.1:26022265-26022284 MS.gene023894:CDS 30.0%
GTATAAACCATTTGTGTGTT+TGG - chr7.1:26022475-26022494 MS.gene023894:CDS 30.0%
TGAGATCAAATGAAGGAAAA+TGG - chr7.1:26022243-26022262 MS.gene023894:CDS 30.0%
TGTATCAAGATGAAATTGGA+GGG - chr7.1:26022213-26022232 MS.gene023894:intron 30.0%
TTATCAATTTGGACACTGTT+TGG - chr7.1:26021672-26021691 MS.gene023894:CDS 30.0%
TTGTATCAAGATGAAATTGG+AGG - chr7.1:26022212-26022231 MS.gene023894:intron 30.0%
! AAGCTTGTATTGATGAGTTT+AGG - chr7.1:26022041-26022060 MS.gene023894:intron 30.0%
! AGATTTTGCTGGGATTAATA+AGG - chr7.1:26022562-26022581 MS.gene023894:CDS 30.0%
! AGCTTGTATTGATGAGTTTA+GGG - chr7.1:26022042-26022061 MS.gene023894:intron 30.0%
! AGTTTTCGAAAGCTATATCA+TGG - chr7.1:26021766-26021785 MS.gene023894:CDS 30.0%
! GATTTTCACTAGCATTCTTT+TGG - chr7.1:26022387-26022406 MS.gene023894:CDS 30.0%
! TCACTGTTAAAGATTTTGCT+GGG - chr7.1:26022552-26022571 MS.gene023894:CDS 30.0%
! TGAGGATGAAAAGGTAATTT+TGG - chr7.1:26022415-26022434 MS.gene023894:CDS 30.0%
! TTCACTGTTAAAGATTTTGC+TGG - chr7.1:26022551-26022570 MS.gene023894:CDS 30.0%
!! CTATGTCTGCTTTTATGTAA+TGG - chr7.1:26021919-26021938 MS.gene023894:intron 30.0%
!! GACTTTTTGAGCTTATCTAT+TGG + chr7.1:26021884-26021903 None:intergenic 30.0%
AATGGAGAAGCAATGAAATG+AGG + chr7.1:26021515-26021534 None:intergenic 35.0%
ACAAACAGGATTCCAAATTC+AGG - chr7.1:26021606-26021625 MS.gene023894:CDS 35.0%
AGAAATCCTCTTTGACAAAC+AGG - chr7.1:26021592-26021611 MS.gene023894:CDS 35.0%
AGAGGAAGGTTTGAAAAAGT+TGG - chr7.1:26022527-26022546 MS.gene023894:CDS 35.0%
AGATTCCATGGTTGATTATG+TGG + chr7.1:26021385-26021404 None:intergenic 35.0%
AGTTAGGTCCATTAACTCTT+AGG + chr7.1:26021547-26021566 None:intergenic 35.0%
CCTTAAAGCAAGCAAAGTTT+GGG - chr7.1:26021352-26021371 MS.gene023894:CDS 35.0%
CTTAAAGCAAGCAAAGTTTG+GGG - chr7.1:26021353-26021372 MS.gene023894:CDS 35.0%
CTTCAAGTGAGATCAAATGA+AGG - chr7.1:26022236-26022255 MS.gene023894:intron 35.0%
GAGAGAATAATGAAAGAGGA+AGG - chr7.1:26022513-26022532 MS.gene023894:CDS 35.0%
GGAACACTAGTTGTGAATAT+TGG - chr7.1:26022287-26022306 MS.gene023894:CDS 35.0%
TCCTTAAAGCAAGCAAAGTT+TGG - chr7.1:26021351-26021370 MS.gene023894:CDS 35.0%
TCTGAGTTTAAGAACTGTCA+TGG - chr7.1:26022092-26022111 MS.gene023894:intron 35.0%
TGGAATTTCAGCATGAGATT+TGG + chr7.1:26021285-26021304 None:intergenic 35.0%
TTCTTCCACATAATCAACCA+TGG - chr7.1:26021377-26021396 MS.gene023894:CDS 35.0%
TTTGAGAGCCTAAGAGTTAA+TGG - chr7.1:26021536-26021555 MS.gene023894:CDS 35.0%
! AAAGTTCTTTGGAGATTCCA+TGG + chr7.1:26021397-26021416 None:intergenic 35.0%
! GCTTGTATTGATGAGTTTAG+GGG - chr7.1:26022043-26022062 MS.gene023894:intron 35.0%
! TAAGTTTAGTTTCAGAAGGG+AGG + chr7.1:26021457-26021476 None:intergenic 35.0%
!! ATGGAAGATGATCAAGTTGA+AGG - chr7.1:26022152-26022171 MS.gene023894:intron 35.0%
!! TGGAAGATGATCAAGTTGAA+GGG - chr7.1:26022153-26022172 MS.gene023894:intron 35.0%
!! TTGTTGGTGATGGAAATAAG+AGG - chr7.1:26022450-26022469 MS.gene023894:CDS 35.0%
!! TTTGCTTGCTTTAAGGAAAG+TGG + chr7.1:26021348-26021367 None:intergenic 35.0%
!!! AGCATTCTTTTGGTGTTTTG+AGG - chr7.1:26022397-26022416 MS.gene023894:CDS 35.0%
!!! TTGGTGTTTTGAGGATGAAA+AGG - chr7.1:26022406-26022425 MS.gene023894:CDS 35.0%
AAGCTGACTGCAAAGTTCTT+TGG + chr7.1:26021408-26021427 None:intergenic 40.0%
ACAACTAGTGTTCCCTCATT+TGG + chr7.1:26022281-26022300 None:intergenic 40.0%
ACTCTTAGGCTCTCAAAGAA+TGG + chr7.1:26021533-26021552 None:intergenic 40.0%
AGAACTGTCATGGATACTTG+AGG - chr7.1:26022102-26022121 MS.gene023894:intron 40.0%
AGAGGAACTCGAAGATCTTA+TGG + chr7.1:26021847-26021866 None:intergenic 40.0%
CCCAAACTTTGCTTGCTTTA+AGG + chr7.1:26021355-26021374 None:intergenic 40.0%
TGGAATCCTGTTTGTCAAAG+AGG + chr7.1:26021601-26021620 None:intergenic 40.0%
TTGGAGATATGCTTCAAGCA+TGG - chr7.1:26022306-26022325 MS.gene023894:CDS 40.0%
TTGGCATAAGAAATTGCGAG+AGG + chr7.1:26021865-26021884 None:intergenic 40.0%
! GTATTGATGAGTTTAGGGGA+AGG - chr7.1:26022047-26022066 MS.gene023894:intron 40.0%
CCATCACCAACAACTTCATC+AGG + chr7.1:26022443-26022462 None:intergenic 45.0%
TTGGCACCTGATGAAGTTGT+TGG - chr7.1:26022434-26022453 MS.gene023894:CDS 45.0%
TTTCAGAAGGGAGGCTGAAT+AGG + chr7.1:26021448-26021467 None:intergenic 45.0%
! CCTGATGAAGTTGTTGGTGA+TGG - chr7.1:26022440-26022459 MS.gene023894:CDS 45.0%
!! GATGATCAAGTTGAAGGGCT+TGG - chr7.1:26022158-26022177 MS.gene023894:intron 45.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 26021269 26022595 26021269 ID=MS.gene023894
chr7.1 mRNA 26021269 26022595 26021269 ID=MS.gene023894.t1;Parent=MS.gene023894
chr7.1 exon 26022237 26022595 26022237 ID=MS.gene023894.t1.exon1;Parent=MS.gene023894.t1
chr7.1 CDS 26022237 26022595 26022237 ID=cds.MS.gene023894.t1;Parent=MS.gene023894.t1
chr7.1 exon 26021269 26021878 26021269 ID=MS.gene023894.t1.exon2;Parent=MS.gene023894.t1
chr7.1 CDS 26021269 26021878 26021269 ID=cds.MS.gene023894.t1;Parent=MS.gene023894.t1
Gene Sequence

>MS.gene023894

ATGATGTCTGATTCCAAATCTCATGCTGAAATTCCAATTTTAGACATGTCAAAAACATTAGATTCATCTTCATTATCCACTTTCCTTAAAGCAAGCAAAGTTTGGGGATTCTTCCACATAATCAACCATGGAATCTCCAAAGAACTTTGCAGTCAGCTTCATTCAATATCAAAATACCTATTCAGCCTCCCTTCTGAAACTAAACTTAGAATTGGTCCATTTTCATCTTTAAAATCTTATACTCCTCATTTCATTGCTTCTCCATTCTTTGAGAGCCTAAGAGTTAATGGACCTAACTTTTATGTTTCTGCTAAGAGCTCTTCAGAAATCCTCTTTGACAAACAGGATTCCAAATTCAGGTAAAACACAATAAGCACAGTGTTATCTTATTAAGCTTCTACTTTTATCAATTTGGACACTGTTTGGATAAACAACTTAATTAAACACTTATAGAATAAGGGTTTATCATATAAATGCCAAACTATTTTCATATAAGTAGTTTTCGAAAGCTATATCATGGAGAGTGCTTACGAAAATATGTTGAAAACAGCTTATGGGCATGTCATAAGTTGTTTCCATAAGATCTTCGAGTTCCTCTCGCAATTTCTTATGCCAATAGATAAGCTCAAAAAGTCACTTGATGTCTTTTCCTATGTCTGCTTTTATGTAATGGAATATAAGTTTATTTATTTATATTATTTTTCTGAATTTGATTAGTGTGATACTACAAGAATATGGAAATAAGATGGAGGAGTTGTCTAAGAAAATTGTAAAGCTTGTATTGATGAGTTTAGGGGAAGGTATTGAGAAAAAGTTTTATGATTCTGAGTTTAAGAACTGTCATGGATACTTGAGGATAAACAATTACTCTTGTCAAGAAATAATGGAAGATGATCAAGTTGAAGGGCTTGGAATGCACACTGACATGAGTTGTATTACTATTTTGTATCAAGATGAAATTGGAGGGCTTCAAGTGAGATCAAATGAAGGAAAATGGATAGATATATGTCCAAATGAGGGAACACTAGTTGTGAATATTGGAGATATGCTTCAAGCATGGAGTAATGATGAATTAAGATCTTCAGAACATAGAGTTGTTTTGAAGCATACTGTTGAGAGATTTTCACTAGCATTCTTTTGGTGTTTTGAGGATGAAAAGGTAATTTTGGCACCTGATGAAGTTGTTGGTGATGGAAATAAGAGGAAGTATAAACCATTTGTGTGTTTGGATTATTTGAAATTTAGAGAGAATAATGAAAGAGGAAGGTTTGAAAAAGTTGGTTTCACTGTTAAAGATTTTGCTGGGATTAATAAGGCTCATCTATAA
Protein sequence

>MS.gene023894.t1

MMSDSKSHAEIPILDMSKTLDSSSLSTFLKASKVWGFFHIINHGISKELCSQLHSISKYLFSLPSETKLRIGPFSSLKSYTPHFIASPFFESLRVNGPNFYVSAKSSSEILFDKQDSKFSVILQEYGNKMEELSKKIVKLVLMSLGEGIEKKFYDSEFKNCHGYLRINNYSCQEIMEDDQVEGLGMHTDMSCITILYQDEIGGLQVRSNEGKWIDICPNEGTLVVNIGDMLQAWSNDELRSSEHRVVLKHTVERFSLAFFWCFEDEKVILAPDEVVGDGNKRKYKPFVCLDYLKFRENNERGRFEKVGFTVKDFAGINKAHL