Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02439.t1 | XP_003612038.1 | 95.5 | 444 | 18 | 1 | 1 | 444 | 1 | 442 | 2.20E-245 | 857.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02439.t1 | O95714 | 29.3 | 372 | 203 | 8 | 77 | 441 | 2954 | 3272 | 8.9e-30 | 132.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02439.t1 | G7KEX6 | 95.5 | 444 | 18 | 1 | 1 | 444 | 1 | 442 | 1.6e-245 | 857.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene024340 | MS.gene02439 | PPI |
MS.gene026015 | MS.gene02439 | PPI |
MS.gene52283 | MS.gene02439 | PPI |
MS.gene02439 | MS.gene050470 | PPI |
MS.gene024337 | MS.gene02439 | PPI |
MS.gene050535 | MS.gene02439 | PPI |
MS.gene51922 | MS.gene02439 | PPI |
MS.gene024564 | MS.gene02439 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02439.t1 | MTR_5g020630 | 95.495 | 444 | 18 | 1 | 1 | 444 | 1 | 442 | 0.0 | 842 |
MS.gene02439.t1 | MTR_0024s0070 | 28.926 | 363 | 208 | 9 | 86 | 420 | 7 | 347 | 4.83e-27 | 112 |
MS.gene02439.t1 | MTR_0024s0070 | 39.007 | 141 | 83 | 2 | 64 | 203 | 196 | 334 | 1.30e-20 | 93.6 |
MS.gene02439.t1 | MTR_0024s0070 | 23.052 | 308 | 187 | 6 | 137 | 442 | 4 | 263 | 1.09e-13 | 72.8 |
MS.gene02439.t1 | MTR_8g094410 | 26.146 | 371 | 208 | 12 | 62 | 423 | 12 | 325 | 1.05e-25 | 107 |
MS.gene02439.t1 | MTR_8g094410 | 34.409 | 186 | 111 | 5 | 31 | 215 | 93 | 268 | 6.33e-18 | 85.5 |
MS.gene02439.t1 | MTR_8g094410 | 23.724 | 333 | 194 | 8 | 116 | 442 | 14 | 292 | 1.81e-17 | 84.0 |
MS.gene02439.t1 | MTR_8g094410 | 26.146 | 371 | 208 | 12 | 62 | 423 | 12 | 325 | 1.66e-25 | 107 |
MS.gene02439.t1 | MTR_8g094410 | 34.409 | 186 | 111 | 5 | 31 | 215 | 93 | 268 | 9.88e-18 | 85.1 |
MS.gene02439.t1 | MTR_8g094410 | 23.724 | 333 | 194 | 8 | 116 | 442 | 14 | 292 | 2.48e-17 | 84.0 |
MS.gene02439.t1 | MTR_8g094410 | 25.000 | 408 | 231 | 13 | 26 | 423 | 32 | 374 | 3.01e-25 | 107 |
MS.gene02439.t1 | MTR_8g094410 | 24.742 | 388 | 227 | 11 | 62 | 442 | 12 | 341 | 1.19e-22 | 99.8 |
MS.gene02439.t1 | MTR_8g094410 | 25.074 | 339 | 181 | 10 | 116 | 443 | 14 | 290 | 1.14e-15 | 79.0 |
MS.gene02439.t1 | MTR_8g094410 | 25.000 | 408 | 231 | 13 | 26 | 423 | 32 | 374 | 5.28e-25 | 107 |
MS.gene02439.t1 | MTR_8g094410 | 24.742 | 388 | 227 | 11 | 62 | 442 | 12 | 341 | 1.70e-22 | 99.8 |
MS.gene02439.t1 | MTR_8g094410 | 25.074 | 339 | 181 | 10 | 116 | 443 | 14 | 290 | 8.80e-16 | 79.7 |
MS.gene02439.t1 | MTR_3g096780 | 26.456 | 412 | 220 | 16 | 26 | 423 | 34 | 376 | 4.95e-24 | 104 |
MS.gene02439.t1 | MTR_3g096780 | 23.232 | 396 | 235 | 9 | 56 | 442 | 8 | 343 | 1.02e-21 | 97.4 |
MS.gene02439.t1 | MTR_3g096780 | 26.984 | 315 | 159 | 10 | 141 | 444 | 39 | 293 | 3.50e-19 | 89.7 |
MS.gene02439.t1 | MTR_3g096780 | 30.350 | 257 | 154 | 10 | 28 | 273 | 141 | 383 | 2.85e-16 | 80.9 |
MS.gene02439.t1 | MTR_1g099220 | 26.585 | 410 | 221 | 14 | 55 | 442 | 270 | 621 | 5.21e-22 | 99.8 |
MS.gene02439.t1 | MTR_8g094410 | 25.424 | 295 | 158 | 8 | 135 | 423 | 2 | 240 | 1.17e-20 | 92.8 |
MS.gene02439.t1 | MTR_8g094410 | 34.555 | 191 | 114 | 5 | 26 | 215 | 3 | 183 | 1.92e-19 | 89.0 |
MS.gene02439.t1 | MTR_8g094410 | 25.521 | 192 | 127 | 3 | 256 | 442 | 27 | 207 | 1.55e-13 | 71.6 |
MS.gene02439.t1 | MTR_8g094410 | 28.095 | 210 | 140 | 5 | 31 | 238 | 60 | 260 | 3.56e-11 | 64.3 |
MS.gene02439.t1 | MTR_3g086300 | 24.866 | 374 | 251 | 11 | 70 | 416 | 153 | 523 | 2.03e-20 | 94.0 |
MS.gene02439.t1 | MTR_3g097060 | 26.526 | 426 | 239 | 13 | 32 | 437 | 41 | 412 | 3.05e-20 | 92.8 |
MS.gene02439.t1 | MTR_3g097060 | 26.330 | 376 | 200 | 12 | 87 | 444 | 40 | 356 | 5.66e-19 | 89.0 |
MS.gene02439.t1 | MTR_7g072410 | 26.303 | 422 | 223 | 16 | 24 | 424 | 233 | 587 | 9.70e-20 | 92.8 |
MS.gene02439.t1 | MTR_6g034795 | 26.368 | 402 | 204 | 16 | 55 | 428 | 267 | 604 | 1.31e-19 | 92.4 |
MS.gene02439.t1 | MTR_4g029410 | 25.428 | 409 | 219 | 14 | 38 | 424 | 45 | 389 | 3.64e-19 | 90.9 |
MS.gene02439.t1 | MTR_4g029410 | 25.731 | 342 | 199 | 14 | 136 | 443 | 35 | 355 | 2.64e-15 | 79.0 |
MS.gene02439.t1 | MTR_3g097060 | 26.330 | 376 | 200 | 12 | 87 | 444 | 40 | 356 | 4.50e-19 | 89.0 |
MS.gene02439.t1 | MTR_3g097060 | 26.562 | 384 | 219 | 13 | 32 | 406 | 41 | 370 | 4.75e-17 | 82.8 |
MS.gene02439.t1 | MTR_7g086050 | 24.485 | 437 | 239 | 14 | 21 | 443 | 148 | 507 | 5.34e-19 | 90.5 |
MS.gene02439.t1 | MTR_3g069030 | 25.059 | 427 | 236 | 14 | 49 | 441 | 83 | 459 | 9.48e-18 | 85.5 |
MS.gene02439.t1 | MTR_3g069030 | 36.810 | 163 | 87 | 6 | 28 | 185 | 308 | 459 | 5.48e-13 | 70.9 |
MS.gene02439.t1 | MTR_3g109650 | 24.444 | 405 | 203 | 14 | 65 | 417 | 75 | 428 | 1.18e-17 | 85.9 |
MS.gene02439.t1 | MTR_7g451760 | 35.802 | 162 | 101 | 2 | 55 | 216 | 86 | 244 | 1.60e-17 | 82.8 |
MS.gene02439.t1 | MTR_7g047560 | 35.802 | 162 | 101 | 2 | 55 | 216 | 86 | 244 | 1.60e-17 | 82.8 |
MS.gene02439.t1 | MTR_5g038220 | 26.494 | 385 | 218 | 14 | 84 | 433 | 16 | 370 | 1.82e-17 | 84.3 |
MS.gene02439.t1 | MTR_7g063440 | 25.310 | 403 | 248 | 11 | 61 | 441 | 14 | 385 | 2.23e-17 | 84.0 |
MS.gene02439.t1 | MTR_7g063440 | 35.758 | 165 | 84 | 8 | 28 | 185 | 236 | 385 | 7.31e-15 | 76.3 |
MS.gene02439.t1 | MTR_7g016640 | 27.425 | 299 | 146 | 9 | 52 | 328 | 162 | 411 | 2.33e-17 | 84.3 |
MS.gene02439.t1 | MTR_7g016640 | 27.049 | 366 | 208 | 18 | 66 | 390 | 65 | 412 | 2.14e-14 | 75.5 |
MS.gene02439.t1 | MTR_7g016640 | 29.442 | 197 | 115 | 6 | 246 | 435 | 41 | 220 | 3.45e-11 | 65.5 |
MS.gene02439.t1 | MTR_7g063440 | 25.310 | 403 | 248 | 11 | 61 | 441 | 106 | 477 | 2.76e-17 | 84.3 |
MS.gene02439.t1 | MTR_7g063440 | 35.758 | 165 | 84 | 8 | 28 | 185 | 328 | 477 | 1.03e-14 | 76.3 |
MS.gene02439.t1 | MTR_8g094410 | 36.486 | 148 | 89 | 3 | 68 | 215 | 2 | 144 | 3.24e-17 | 82.0 |
MS.gene02439.t1 | MTR_8g094410 | 25.490 | 255 | 129 | 7 | 175 | 423 | 2 | 201 | 1.51e-15 | 77.0 |
MS.gene02439.t1 | MTR_8g094410 | 26.404 | 178 | 115 | 3 | 270 | 442 | 2 | 168 | 1.42e-11 | 65.1 |
MS.gene02439.t1 | MTR_8g094410 | 29.310 | 174 | 115 | 3 | 31 | 204 | 21 | 186 | 2.94e-11 | 64.3 |
MS.gene02439.t1 | MTR_2g079610 | 27.302 | 315 | 171 | 7 | 135 | 442 | 128 | 391 | 4.19e-17 | 84.0 |
MS.gene02439.t1 | MTR_1g042800 | 25.978 | 358 | 219 | 11 | 123 | 443 | 204 | 552 | 1.59e-16 | 82.8 |
MS.gene02439.t1 | MTR_1g042800 | 24.457 | 368 | 216 | 14 | 55 | 382 | 250 | 595 | 5.23e-14 | 75.1 |
MS.gene02439.t1 | MTR_7g016640 | 27.174 | 276 | 133 | 8 | 52 | 308 | 162 | 388 | 2.00e-16 | 81.3 |
MS.gene02439.t1 | MTR_7g016640 | 26.531 | 343 | 194 | 17 | 68 | 369 | 67 | 392 | 1.63e-12 | 69.3 |
MS.gene02439.t1 | MTR_7g016640 | 29.798 | 198 | 113 | 7 | 246 | 435 | 41 | 220 | 2.81e-11 | 65.5 |
MS.gene02439.t1 | MTR_5g089900 | 23.469 | 392 | 221 | 13 | 64 | 434 | 326 | 659 | 3.02e-16 | 82.0 |
MS.gene02439.t1 | MTR_1g006695 | 23.404 | 376 | 209 | 9 | 60 | 402 | 9 | 338 | 4.46e-15 | 77.4 |
MS.gene02439.t1 | MTR_3g064560 | 22.704 | 392 | 211 | 12 | 64 | 428 | 305 | 631 | 1.35e-14 | 76.6 |
MS.gene02439.t1 | MTR_3g064560 | 23.162 | 272 | 183 | 5 | 158 | 407 | 292 | 559 | 7.16e-13 | 71.2 |
MS.gene02439.t1 | MTR_0095s0070 | 24.752 | 303 | 157 | 9 | 141 | 432 | 33 | 275 | 5.49e-14 | 72.4 |
MS.gene02439.t1 | MTR_0095s0070 | 24.742 | 291 | 161 | 10 | 26 | 312 | 28 | 264 | 3.32e-13 | 70.1 |
MS.gene02439.t1 | MTR_0095s0070 | 28.846 | 156 | 105 | 4 | 292 | 442 | 28 | 182 | 1.16e-12 | 68.6 |
MS.gene02439.t1 | MTR_0095s0070 | 26.943 | 193 | 122 | 5 | 256 | 441 | 52 | 232 | 4.66e-12 | 66.6 |
MS.gene02439.t1 | MTR_3g113250 | 24.735 | 283 | 158 | 5 | 159 | 429 | 45 | 284 | 5.33e-12 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02439.t1 | AT5G48330 | 60.000 | 435 | 153 | 7 | 19 | 443 | 31 | 454 | 7.99e-177 | 503 |
MS.gene02439.t1 | AT5G48330 | 59.908 | 434 | 154 | 7 | 19 | 443 | 31 | 453 | 2.54e-176 | 501 |
MS.gene02439.t1 | AT3G02510 | 29.132 | 357 | 214 | 10 | 86 | 420 | 9 | 348 | 2.89e-28 | 115 |
MS.gene02439.t1 | AT3G02510 | 33.548 | 155 | 99 | 3 | 63 | 216 | 196 | 347 | 2.57e-17 | 84.0 |
MS.gene02439.t1 | AT3G02510 | 27.304 | 293 | 139 | 8 | 65 | 335 | 152 | 392 | 6.68e-17 | 82.8 |
MS.gene02439.t1 | AT5G63860 | 26.667 | 405 | 225 | 14 | 28 | 423 | 36 | 377 | 2.15e-27 | 114 |
MS.gene02439.t1 | AT5G63860 | 27.362 | 307 | 199 | 8 | 28 | 321 | 89 | 384 | 5.84e-22 | 98.2 |
MS.gene02439.t1 | AT5G63860 | 22.423 | 388 | 245 | 8 | 58 | 442 | 10 | 344 | 5.00e-21 | 95.5 |
MS.gene02439.t1 | AT5G63860 | 25.562 | 356 | 195 | 11 | 95 | 443 | 1 | 293 | 4.72e-18 | 86.7 |
MS.gene02439.t1 | AT5G16040 | 28.011 | 357 | 218 | 9 | 86 | 420 | 9 | 348 | 8.02e-27 | 111 |
MS.gene02439.t1 | AT5G16040 | 34.507 | 142 | 90 | 2 | 63 | 203 | 196 | 335 | 1.10e-18 | 88.2 |
MS.gene02439.t1 | AT5G16040 | 26.384 | 307 | 177 | 5 | 137 | 442 | 6 | 264 | 6.17e-18 | 85.9 |
MS.gene02439.t1 | AT5G16040 | 25.330 | 379 | 157 | 10 | 28 | 330 | 59 | 387 | 1.85e-17 | 84.3 |
MS.gene02439.t1 | AT3G02510 | 27.635 | 351 | 179 | 8 | 84 | 420 | 1 | 290 | 2.15e-22 | 98.2 |
MS.gene02439.t1 | AT3G02510 | 34.507 | 142 | 90 | 2 | 63 | 203 | 138 | 277 | 1.50e-17 | 84.0 |
MS.gene02439.t1 | AT3G02510 | 27.304 | 293 | 139 | 8 | 65 | 335 | 94 | 334 | 3.64e-17 | 82.8 |
MS.gene02439.t1 | AT3G02510 | 26.250 | 320 | 161 | 8 | 138 | 442 | 1 | 260 | 2.16e-16 | 80.5 |
MS.gene02439.t1 | AT3G02510 | 27.729 | 339 | 170 | 9 | 86 | 411 | 9 | 285 | 7.09e-22 | 96.3 |
MS.gene02439.t1 | AT3G02510 | 25.272 | 368 | 196 | 9 | 26 | 379 | 5 | 307 | 5.02e-16 | 79.0 |
MS.gene02439.t1 | AT3G02510 | 25.237 | 317 | 166 | 9 | 137 | 441 | 6 | 263 | 8.22e-13 | 69.3 |
MS.gene02439.t1 | AT5G12350 | 24.615 | 390 | 218 | 12 | 64 | 434 | 309 | 641 | 1.71e-20 | 95.1 |
MS.gene02439.t1 | AT5G12350 | 24.810 | 395 | 207 | 17 | 29 | 401 | 330 | 656 | 4.02e-12 | 68.9 |
MS.gene02439.t1 | AT5G19420 | 24.041 | 391 | 219 | 12 | 64 | 434 | 313 | 645 | 6.12e-20 | 93.2 |
MS.gene02439.t1 | AT1G76950 | 25.240 | 416 | 221 | 16 | 55 | 442 | 272 | 625 | 7.14e-20 | 93.2 |
MS.gene02439.t1 | AT5G19420 | 24.745 | 392 | 215 | 14 | 64 | 434 | 347 | 679 | 8.35e-20 | 93.2 |
MS.gene02439.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 50 | 420 | 1.02e-19 | 91.3 |
MS.gene02439.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 50 | 420 | 1.02e-19 | 91.3 |
MS.gene02439.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 50 | 420 | 1.02e-19 | 91.3 |
MS.gene02439.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 150 | 520 | 1.03e-19 | 92.0 |
MS.gene02439.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 150 | 520 | 1.03e-19 | 92.0 |
MS.gene02439.t1 | AT3G26100 | 25.197 | 381 | 241 | 9 | 70 | 416 | 150 | 520 | 1.03e-19 | 92.0 |
MS.gene02439.t1 | AT5G19420 | 24.745 | 392 | 215 | 14 | 64 | 434 | 313 | 645 | 1.08e-19 | 92.8 |
MS.gene02439.t1 | AT1G65920 | 24.173 | 393 | 211 | 11 | 64 | 433 | 247 | 575 | 4.86e-19 | 90.5 |
MS.gene02439.t1 | AT1G65920 | 24.465 | 327 | 219 | 10 | 138 | 443 | 215 | 534 | 1.78e-12 | 70.1 |
MS.gene02439.t1 | AT1G65920 | 26.210 | 248 | 139 | 10 | 65 | 281 | 351 | 585 | 8.52e-11 | 64.7 |
MS.gene02439.t1 | AT1G65920 | 24.173 | 393 | 211 | 11 | 64 | 433 | 293 | 621 | 5.09e-19 | 90.5 |
MS.gene02439.t1 | AT1G65920 | 25.000 | 328 | 216 | 11 | 138 | 443 | 261 | 580 | 2.11e-12 | 70.1 |
MS.gene02439.t1 | AT1G65920 | 26.210 | 248 | 139 | 10 | 65 | 281 | 397 | 631 | 7.72e-11 | 65.1 |
MS.gene02439.t1 | AT3G55580 | 26.859 | 417 | 246 | 13 | 49 | 441 | 102 | 483 | 5.15e-19 | 89.7 |
MS.gene02439.t1 | AT3G55580 | 31.746 | 189 | 108 | 7 | 6 | 185 | 307 | 483 | 1.14e-12 | 70.1 |
MS.gene02439.t1 | AT3G53830 | 26.683 | 416 | 250 | 15 | 46 | 441 | 87 | 467 | 9.29e-19 | 89.0 |
MS.gene02439.t1 | AT3G53830 | 27.954 | 347 | 186 | 15 | 4 | 328 | 163 | 467 | 3.78e-11 | 65.5 |
MS.gene02439.t1 | AT3G53830 | 29.352 | 293 | 171 | 9 | 158 | 441 | 230 | 495 | 3.25e-18 | 87.4 |
MS.gene02439.t1 | AT3G53830 | 27.954 | 347 | 186 | 15 | 4 | 328 | 191 | 495 | 3.47e-11 | 65.5 |
MS.gene02439.t1 | AT5G60870 | 24.945 | 457 | 252 | 16 | 44 | 443 | 20 | 442 | 3.49e-18 | 87.0 |
MS.gene02439.t1 | AT5G60870 | 26.513 | 347 | 179 | 9 | 65 | 392 | 154 | 443 | 2.31e-17 | 84.3 |
MS.gene02439.t1 | AT5G16040 | 26.471 | 306 | 176 | 5 | 137 | 441 | 6 | 263 | 6.99e-18 | 85.1 |
MS.gene02439.t1 | AT5G16040 | 25.538 | 372 | 194 | 11 | 26 | 381 | 5 | 309 | 1.44e-16 | 81.3 |
MS.gene02439.t1 | AT1G27060 | 26.410 | 390 | 229 | 10 | 28 | 417 | 17 | 348 | 1.14e-17 | 84.7 |
MS.gene02439.t1 | AT5G42140 | 25.189 | 397 | 227 | 14 | 55 | 434 | 268 | 611 | 1.21e-17 | 86.3 |
MS.gene02439.t1 | AT5G42140 | 25.189 | 397 | 227 | 14 | 55 | 434 | 268 | 611 | 1.21e-17 | 86.3 |
MS.gene02439.t1 | AT5G08710 | 26.222 | 450 | 252 | 16 | 19 | 442 | 36 | 431 | 1.25e-17 | 85.1 |
MS.gene02439.t1 | AT5G60870 | 26.513 | 347 | 186 | 9 | 65 | 392 | 154 | 450 | 1.46e-17 | 85.1 |
MS.gene02439.t1 | AT5G60870 | 30.178 | 169 | 108 | 4 | 55 | 216 | 254 | 419 | 2.44e-14 | 75.1 |
MS.gene02439.t1 | AT3G03790 | 26.173 | 405 | 213 | 13 | 17 | 405 | 141 | 475 | 1.47e-17 | 86.3 |
MS.gene02439.t1 | AT3G15430 | 24.939 | 413 | 242 | 9 | 43 | 444 | 38 | 393 | 2.41e-17 | 84.7 |
MS.gene02439.t1 | AT3G15430 | 24.939 | 413 | 242 | 9 | 43 | 444 | 38 | 393 | 2.41e-17 | 84.7 |
MS.gene02439.t1 | AT3G15430 | 24.939 | 413 | 242 | 9 | 43 | 444 | 38 | 393 | 2.41e-17 | 84.7 |
MS.gene02439.t1 | AT3G15430 | 24.939 | 413 | 242 | 9 | 43 | 444 | 38 | 393 | 2.41e-17 | 84.7 |
MS.gene02439.t1 | AT3G15430 | 24.939 | 413 | 242 | 9 | 43 | 444 | 38 | 393 | 2.41e-17 | 84.7 |
MS.gene02439.t1 | AT3G15430 | 24.939 | 413 | 242 | 9 | 43 | 444 | 38 | 393 | 2.41e-17 | 84.7 |
MS.gene02439.t1 | AT4G14368 | 25.316 | 395 | 208 | 17 | 55 | 424 | 261 | 593 | 4.96e-17 | 84.3 |
MS.gene02439.t1 | AT4G14368 | 25.392 | 319 | 187 | 10 | 132 | 443 | 285 | 559 | 7.53e-17 | 84.0 |
MS.gene02439.t1 | AT3G23270 | 24.408 | 422 | 228 | 18 | 48 | 441 | 239 | 597 | 5.32e-17 | 84.3 |
MS.gene02439.t1 | AT3G23270 | 26.178 | 382 | 215 | 14 | 80 | 443 | 213 | 545 | 6.71e-17 | 84.0 |
MS.gene02439.t1 | AT3G23270 | 24.408 | 422 | 228 | 18 | 48 | 441 | 235 | 593 | 5.45e-17 | 84.3 |
MS.gene02439.t1 | AT3G23270 | 26.178 | 382 | 215 | 14 | 80 | 443 | 209 | 541 | 6.51e-17 | 84.0 |
MS.gene02439.t1 | AT3G03790 | 26.271 | 354 | 185 | 10 | 65 | 405 | 188 | 478 | 6.01e-17 | 84.3 |
MS.gene02439.t1 | AT3G03790 | 27.551 | 294 | 155 | 11 | 16 | 296 | 192 | 440 | 2.51e-13 | 72.8 |
MS.gene02439.t1 | AT3G03790 | 26.271 | 354 | 185 | 10 | 65 | 405 | 188 | 478 | 6.31e-17 | 84.0 |
MS.gene02439.t1 | AT3G03790 | 27.551 | 294 | 155 | 11 | 16 | 296 | 192 | 440 | 2.58e-13 | 72.8 |
MS.gene02439.t1 | AT5G60870 | 30.864 | 162 | 109 | 3 | 55 | 216 | 85 | 243 | 6.97e-17 | 80.9 |
MS.gene02439.t1 | AT5G60870 | 33.571 | 140 | 84 | 3 | 53 | 185 | 134 | 271 | 2.32e-14 | 73.6 |
MS.gene02439.t1 | AT4G14368 | 25.472 | 318 | 186 | 10 | 132 | 442 | 285 | 558 | 1.14e-16 | 83.2 |
MS.gene02439.t1 | AT4G14368 | 25.381 | 394 | 207 | 17 | 55 | 423 | 261 | 592 | 1.60e-16 | 82.8 |
MS.gene02439.t1 | AT4G14368 | 25.472 | 318 | 186 | 10 | 132 | 442 | 283 | 556 | 1.15e-16 | 83.2 |
MS.gene02439.t1 | AT4G14368 | 25.381 | 394 | 207 | 17 | 55 | 423 | 259 | 590 | 1.62e-16 | 82.8 |
MS.gene02439.t1 | AT4G14368 | 25.472 | 318 | 186 | 10 | 132 | 442 | 278 | 551 | 1.16e-16 | 83.2 |
MS.gene02439.t1 | AT4G14368 | 25.381 | 394 | 207 | 17 | 55 | 423 | 254 | 585 | 1.74e-16 | 82.8 |
MS.gene02439.t1 | AT3G02300 | 27.243 | 301 | 149 | 11 | 65 | 336 | 168 | 427 | 2.78e-16 | 81.3 |
MS.gene02439.t1 | AT3G02300 | 25.620 | 363 | 217 | 12 | 66 | 390 | 64 | 411 | 1.82e-13 | 72.4 |
MS.gene02439.t1 | AT3G02300 | 30.851 | 188 | 107 | 5 | 268 | 441 | 64 | 242 | 4.03e-12 | 68.6 |
MS.gene02439.t1 | AT3G02300 | 27.243 | 301 | 149 | 11 | 65 | 336 | 179 | 438 | 3.01e-16 | 81.3 |
MS.gene02439.t1 | AT3G02300 | 25.620 | 363 | 217 | 12 | 66 | 390 | 75 | 422 | 1.65e-13 | 72.8 |
MS.gene02439.t1 | AT3G02300 | 35.172 | 145 | 80 | 4 | 268 | 407 | 75 | 210 | 4.36e-12 | 68.2 |
MS.gene02439.t1 | AT5G11580 | 25.513 | 439 | 222 | 15 | 28 | 413 | 37 | 423 | 5.06e-16 | 80.9 |
MS.gene02439.t1 | AT5G11580 | 26.706 | 337 | 185 | 13 | 135 | 416 | 34 | 363 | 6.96e-13 | 70.9 |
MS.gene02439.t1 | AT5G60870 | 27.559 | 254 | 132 | 5 | 65 | 312 | 154 | 361 | 9.41e-16 | 79.3 |
MS.gene02439.t1 | AT5G60870 | 31.818 | 132 | 87 | 3 | 55 | 186 | 254 | 382 | 5.72e-12 | 67.4 |
MS.gene02439.t1 | AT1G19880 | 26.710 | 307 | 152 | 8 | 159 | 444 | 45 | 299 | 7.49e-15 | 77.0 |
MS.gene02439.t1 | AT1G19880 | 23.737 | 396 | 251 | 11 | 57 | 442 | 52 | 406 | 1.64e-14 | 75.9 |
MS.gene02439.t1 | AT3G47660 | 24.598 | 435 | 240 | 19 | 30 | 442 | 119 | 487 | 3.33e-14 | 75.5 |
MS.gene02439.t1 | AT3G47660 | 24.598 | 435 | 240 | 19 | 30 | 442 | 186 | 554 | 3.95e-14 | 75.1 |
MS.gene02439.t1 | AT3G47660 | 24.598 | 435 | 240 | 19 | 30 | 442 | 264 | 632 | 4.20e-14 | 75.1 |
MS.gene02439.t1 | AT3G47660 | 24.598 | 435 | 240 | 19 | 30 | 442 | 261 | 629 | 4.27e-14 | 75.1 |
MS.gene02439.t1 | AT3G47660 | 24.598 | 435 | 240 | 19 | 30 | 442 | 261 | 629 | 4.27e-14 | 75.1 |
MS.gene02439.t1 | AT3G47660 | 24.598 | 435 | 240 | 19 | 30 | 442 | 264 | 632 | 4.39e-14 | 75.1 |
MS.gene02439.t1 | AT3G47660 | 24.368 | 435 | 241 | 18 | 30 | 442 | 300 | 668 | 5.04e-14 | 75.1 |
MS.gene02439.t1 | AT1G69710 | 25.581 | 301 | 192 | 8 | 136 | 407 | 260 | 557 | 1.57e-13 | 73.6 |
MS.gene02439.t1 | AT1G69710 | 29.661 | 236 | 141 | 9 | 68 | 281 | 412 | 644 | 2.46e-11 | 66.6 |
MS.gene02439.t1 | AT1G69710 | 25.581 | 301 | 192 | 8 | 136 | 407 | 247 | 544 | 1.65e-13 | 73.6 |
MS.gene02439.t1 | AT1G69710 | 29.289 | 239 | 144 | 9 | 65 | 281 | 396 | 631 | 2.52e-11 | 66.6 |
MS.gene02439.t1 | AT5G08710 | 26.781 | 351 | 191 | 13 | 19 | 357 | 36 | 332 | 1.29e-12 | 68.9 |
MS.gene02439.t1 | AT5G08710 | 25.959 | 339 | 173 | 13 | 87 | 407 | 54 | 332 | 1.35e-12 | 68.9 |
Find 160 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGATGGGTCTGTTTGGGTTT+GGG | 0.143939 | 5.3:-11912398 | MS.gene02439:CDS |
CTGAAGCTGTTCTGCCTTCT+AGG | 0.180347 | 5.3:-11912333 | MS.gene02439:CDS |
TCTAACCCCTCCACTCTTCT+TGG | 0.209669 | 5.3:+11912478 | None:intergenic |
CAAAATTTGAAAACCTTCTA+AGG | 0.230502 | 5.3:+11910443 | None:intergenic |
CCACTTCACAAGGCGATCTT+TGG | 0.235793 | 5.3:-11912567 | MS.gene02439:CDS |
AGATGGAAGGATAGGGAATA+TGG | 0.260984 | 5.3:-11911366 | MS.gene02439:CDS |
ATGATGGGTCTGTTTGGGTT+TGG | 0.261109 | 5.3:-11912399 | MS.gene02439:CDS |
AGACTAACATGCCAATAATA+TGG | 0.268553 | 5.3:-11911220 | MS.gene02439:CDS |
GCCTTGATTGATGCGTTGGC+TGG | 0.288036 | 5.3:-11910612 | MS.gene02439:CDS |
CACAAGGCGATCTTTGGGCT+TGG | 0.291957 | 5.3:-11912561 | MS.gene02439:CDS |
GGGGCGAGCTAGAGAAGATT+TGG | 0.300080 | 5.3:-11910817 | MS.gene02439:CDS |
AAGTCCAAGTTGTCCCCTTT+TGG | 0.301219 | 5.3:+11912369 | None:intergenic |
CTGTGGATGGCAAGCTGTTT+GGG | 0.306555 | 5.3:-11911403 | MS.gene02439:CDS |
ACAAGGCGATCTTTGGGCTT+GGG | 0.310684 | 5.3:-11912560 | MS.gene02439:CDS |
AGGCGAGGTTCCCATATTAT+TGG | 0.321168 | 5.3:+11911209 | None:intergenic |
CATAATCTGGTTCTTGTTGC+TGG | 0.330642 | 5.3:-11910399 | MS.gene02439:CDS |
GATGGTGCCCTCTTGAGTTC+TGG | 0.335543 | 5.3:-11910861 | MS.gene02439:CDS |
GAAACAGGTCTCGTTTGGTT+GGG | 0.339280 | 5.3:-11911444 | MS.gene02439:intron |
CCAACAACCACCGTTGGTAT+AGG | 0.342749 | 5.3:-11912676 | MS.gene02439:CDS |
AGCGGGGCTTGGCCACTCTT+TGG | 0.346640 | 5.3:-11910751 | MS.gene02439:CDS |
CACTTCACAAGGCGATCTTT+GGG | 0.348125 | 5.3:-11912566 | MS.gene02439:CDS |
TTGGTGATGATGGGTCTGTT+TGG | 0.349821 | 5.3:-11912405 | MS.gene02439:CDS |
GTCTGGGTTTGATCATAATC+TGG | 0.355645 | 5.3:-11910412 | MS.gene02439:CDS |
TCGTGTTGTGTTGGTGATGA+TGG | 0.355668 | 5.3:-11912415 | MS.gene02439:CDS |
TGGTGATGATGGGTCTGTTT+GGG | 0.357075 | 5.3:-11912404 | MS.gene02439:CDS |
TCAGATAGTAATGTCACTTT+GGG | 0.357204 | 5.3:-11910708 | MS.gene02439:CDS |
AGCCCCGCTGCTACGGAAAC+AGG | 0.364716 | 5.3:+11910765 | None:intergenic |
TTCAGCAGGGCGTGCACATT+CGG | 0.368046 | 5.3:-11910571 | MS.gene02439:CDS |
GAAATGTGGGTCTGGGGATC+TGG | 0.369104 | 5.3:-11910528 | MS.gene02439:CDS |
GATGGGTCTGTTTGGGTTTG+GGG | 0.371073 | 5.3:-11912397 | MS.gene02439:CDS |
TCAGAAGGTAAAGAAGGAAT+TGG | 0.376055 | 5.3:+11912631 | None:intergenic |
GGATGGCAAGCTGTTTGGGT+GGG | 0.376413 | 5.3:-11911399 | MS.gene02439:CDS |
TAGAAACAACGAAGCCCAAC+TGG | 0.377481 | 5.3:-11912536 | MS.gene02439:CDS |
ACTCCTGTTTCCGTAGCAGC+GGG | 0.387778 | 5.3:-11910768 | MS.gene02439:CDS |
GCACTTGAACTGGAATCTAA+TGG | 0.394490 | 5.3:+11911320 | None:intergenic |
GTTTCCGTAGCAGCGGGGCT+TGG | 0.395218 | 5.3:-11910762 | MS.gene02439:CDS |
AGTAACGTGTATGGCCAATT+GGG | 0.400946 | 5.3:-11910837 | MS.gene02439:CDS |
CAAAAGGAGAAATGTGGGTC+TGG | 0.402480 | 5.3:-11910536 | MS.gene02439:CDS |
TGATTGAAACAGGTCTCGTT+TGG | 0.413513 | 5.3:-11911449 | MS.gene02439:intron |
ACTGTGGATGGCAAGCTGTT+TGG | 0.414500 | 5.3:-11911404 | MS.gene02439:CDS |
CGCCCTGCTGAAACTGAAAC+CGG | 0.414741 | 5.3:+11910582 | None:intergenic |
TCCTGCCTTGATTGATGCGT+TGG | 0.421410 | 5.3:-11910616 | MS.gene02439:CDS |
AATAATATGGGAACCTCGCC+TGG | 0.424364 | 5.3:-11911207 | MS.gene02439:CDS |
GTTTGAAAATGCACTTGAAC+TGG | 0.426915 | 5.3:+11911310 | None:intergenic |
TGCGTTGGCTGGGGAAAATC+CGG | 0.427799 | 5.3:-11910601 | MS.gene02439:CDS |
CTTCTCTAGCTCGCCCCAAT+TGG | 0.427816 | 5.3:+11910823 | None:intergenic |
AAGTAACGTGTATGGCCAAT+TGG | 0.428223 | 5.3:-11910838 | MS.gene02439:CDS |
GGGCGAGCTAGAGAAGATTT+GGG | 0.429340 | 5.3:-11910816 | MS.gene02439:CDS |
ATCAGATAGTAATGTCACTT+TGG | 0.429388 | 5.3:-11910709 | MS.gene02439:CDS |
CCTTGATTGATGCGTTGGCT+GGG | 0.431283 | 5.3:-11910611 | MS.gene02439:CDS |
GGAGTGAACTTTATGTCAAC+AGG | 0.436438 | 5.3:+11910786 | None:intergenic |
GAAAGTGCTTCAACCCTAGA+AGG | 0.437657 | 5.3:+11912319 | None:intergenic |
GATGGCAAGCTGTTTGGGTG+GGG | 0.439388 | 5.3:-11911398 | MS.gene02439:CDS |
AGTTCTCAGCTAGGACGGGC+AGG | 0.440448 | 5.3:-11910651 | MS.gene02439:CDS |
CGTGTTGTGTTGGTGATGAT+GGG | 0.440936 | 5.3:-11912414 | MS.gene02439:CDS |
GACTACAGATATTGCTTCAT+GGG | 0.446195 | 5.3:-11910685 | MS.gene02439:CDS |
TGAAGCTGTTCTGCCTTCTA+GGG | 0.448975 | 5.3:-11912332 | MS.gene02439:CDS |
AAACAGGTCTCGTTTGGTTG+GGG | 0.450780 | 5.3:-11911443 | MS.gene02439:intron |
TGAAACAGGTCTCGTTTGGT+TGG | 0.450912 | 5.3:-11911445 | MS.gene02439:intron |
TGGATGGCAAGCTGTTTGGG+TGG | 0.459079 | 5.3:-11911400 | MS.gene02439:CDS |
CAAGGCGATCTTTGGGCTTG+GGG | 0.460820 | 5.3:-11912559 | MS.gene02439:CDS |
ATCAATCAAGGCAGGAAGAT+AGG | 0.464337 | 5.3:+11910623 | None:intergenic |
CCTATACCAACGGTGGTTGT+TGG | 0.466016 | 5.3:+11912676 | None:intergenic |
AATCCGGTTTCAGTTTCAGC+AGG | 0.467662 | 5.3:-11910585 | MS.gene02439:CDS |
ATGAGCACGGTGATGAGTTT+CGG | 0.468069 | 5.3:-11912727 | MS.gene02439:CDS |
GGAAAGCCCACGACCCAGTT+GGG | 0.471539 | 5.3:+11912522 | None:intergenic |
TTAGAAAATGTGAAGGTTTG+TGG | 0.475248 | 5.3:-11912460 | MS.gene02439:CDS |
AAAAGGAGAAATGTGGGTCT+GGG | 0.480674 | 5.3:-11910535 | MS.gene02439:CDS |
AACGAAGCCCAACTGGGTCG+TGG | 0.486773 | 5.3:-11912529 | MS.gene02439:CDS |
TCGGTTGCTCTCACATCAAA+AGG | 0.487958 | 5.3:-11910552 | MS.gene02439:CDS |
ATGGGTCTGTTTGGGTTTGG+GGG | 0.497631 | 5.3:-11912396 | MS.gene02439:CDS |
GAAAACCTTCTAAGGAATCC+AGG | 0.497690 | 5.3:+11910451 | None:intergenic |
GGACTACAGATATTGCTTCA+TGG | 0.498556 | 5.3:-11910686 | MS.gene02439:CDS |
GACTAACATGCCAATAATAT+GGG | 0.499069 | 5.3:-11911219 | MS.gene02439:CDS |
CCCAGCCAACGCATCAATCA+AGG | 0.500231 | 5.3:+11910611 | None:intergenic |
TATTATGCAGATGGAAGGAT+AGG | 0.501045 | 5.3:-11911374 | MS.gene02439:CDS |
GGCGATCACAGAGAATATTC+CGG | 0.501138 | 5.3:-11912795 | MS.gene02439:CDS |
GTGGCCAAGCCCCGCTGCTA+CGG | 0.501725 | 5.3:+11910758 | None:intergenic |
TCTAAGGAATCCAGGTAAAA+CGG | 0.504606 | 5.3:+11910459 | None:intergenic |
ATCAAGGCAGGAAGATAGGC+AGG | 0.508105 | 5.3:+11910627 | None:intergenic |
GGTAAAGAAGGAATTGGAGT+TGG | 0.508424 | 5.3:+11912637 | None:intergenic |
TTCTCCAGAAAACGTAGTTA+AGG | 0.508526 | 5.3:-11912299 | MS.gene02439:intron |
CTTGATTGATGCGTTGGCTG+GGG | 0.510648 | 5.3:-11910610 | MS.gene02439:CDS |
GATGGAAGGATAGGGAATAT+GGG | 0.512559 | 5.3:-11911365 | MS.gene02439:CDS |
CGGAAAGCCCACGACCCAGT+TGG | 0.514415 | 5.3:+11912521 | None:intergenic |
ACAATATCAGAAGGTAAAGA+AGG | 0.516505 | 5.3:+11912625 | None:intergenic |
TCACCGTGCTCATCCATCTC+CGG | 0.521429 | 5.3:+11912737 | None:intergenic |
CCGTTGTTATCCACCGGAGA+TGG | 0.522709 | 5.3:-11912750 | MS.gene02439:CDS |
AAAGAAAGTCTTACAAGGAA+TGG | 0.524779 | 5.3:-11911249 | MS.gene02439:CDS |
ATGTCCAAAAGGGGACAACT+TGG | 0.525312 | 5.3:-11912373 | MS.gene02439:CDS |
CTCATTCCATGTTTCTCTAG+CGG | 0.530612 | 5.3:+11912501 | None:intergenic |
AAAGAACTAAAGAGTGATCA+AGG | 0.530943 | 5.3:+11911141 | None:intergenic |
TACTATCTGATTCATCAAGC+TGG | 0.532238 | 5.3:+11910721 | None:intergenic |
GGTGTTGTTTCGTGTTGTGT+TGG | 0.534055 | 5.3:-11912424 | MS.gene02439:CDS |
CACTCCTGTTTCCGTAGCAG+CGG | 0.534340 | 5.3:-11910769 | MS.gene02439:CDS |
CCAAAGATCGCCTTGTGAAG+TGG | 0.541795 | 5.3:+11912567 | None:intergenic |
AGTTCTGGAAGTAACGTGTA+TGG | 0.542194 | 5.3:-11910846 | MS.gene02439:CDS |
GACGGAACCCACGGAGCACT+CGG | 0.542264 | 5.3:-11912703 | MS.gene02439:CDS |
AAAAGGGGACAACTTGGACT+TGG | 0.548121 | 5.3:-11912367 | MS.gene02439:CDS |
ACTGCGTGGCGTTCAAGTTG+TGG | 0.548356 | 5.3:-11911177 | MS.gene02439:CDS |
GGGTGGGGCTATTATGCAGA+TGG | 0.551116 | 5.3:-11911383 | MS.gene02439:CDS |
CACATCAAAAGGAGAAATGT+GGG | 0.554457 | 5.3:-11910541 | MS.gene02439:CDS |
CCCGTCCTAGCTGAGAACTC+TGG | 0.559607 | 5.3:+11910655 | None:intergenic |
TGCGAGAGAGTGGTAGTGAC+CGG | 0.560541 | 5.3:+11912591 | None:intergenic |
TGGTAAACCGAGTGCTCCGT+GGG | 0.572538 | 5.3:+11912696 | None:intergenic |
GCTCTTGCATTAACTGTGGA+TGG | 0.574863 | 5.3:-11911416 | MS.gene02439:CDS |
GTTCTCAGCTAGGACGGGCA+GGG | 0.575236 | 5.3:-11910650 | MS.gene02439:CDS |
CGCAGTTCTTCAACCAGGCG+AGG | 0.575726 | 5.3:+11911194 | None:intergenic |
ACCAGAGTTCTCAGCTAGGA+CGG | 0.577035 | 5.3:-11910656 | MS.gene02439:CDS |
CCAGAGTTCTCAGCTAGGAC+GGG | 0.578114 | 5.3:-11910655 | MS.gene02439:CDS |
ACGAAGCCCAACTGGGTCGT+GGG | 0.579776 | 5.3:-11912528 | MS.gene02439:CDS |
TCACATCAAAAGGAGAAATG+TGG | 0.579944 | 5.3:-11910542 | MS.gene02439:CDS |
GAATATGGGGAATGATCACT+TGG | 0.580284 | 5.3:-11911351 | MS.gene02439:CDS |
TTGGTAAACCGAGTGCTCCG+TGG | 0.581895 | 5.3:+11912695 | None:intergenic |
GCCAACGCATCAATCAAGGC+AGG | 0.582821 | 5.3:+11910615 | None:intergenic |
CCGCCGCCGTTGTTATCCAC+CGG | 0.586164 | 5.3:-11912756 | MS.gene02439:CDS |
AGTCTTACAAGGAATGGCAG+AGG | 0.587231 | 5.3:-11911243 | MS.gene02439:CDS |
GGTTTACCAACAACCACCGT+TGG | 0.588291 | 5.3:-11912682 | MS.gene02439:CDS |
CGCCACGCAGTTCTTCAACC+AGG | 0.592349 | 5.3:+11911189 | None:intergenic |
AACAGGTCTCGTTTGGTTGG+GGG | 0.594975 | 5.3:-11911442 | MS.gene02439:intron |
GTGGTAGTGACCGGCGTGGA+CGG | 0.596464 | 5.3:+11912600 | None:intergenic |
CGTTACTTCCAGAACTCAAG+AGG | 0.596715 | 5.3:+11910853 | None:intergenic |
ATGGAAGGATAGGGAATATG+GGG | 0.598459 | 5.3:-11911364 | MS.gene02439:CDS |
AGTTTCGGCGACGGAACCCA+CGG | 0.608836 | 5.3:-11912712 | MS.gene02439:CDS |
AAAGGAGAAATGTGGGTCTG+GGG | 0.610343 | 5.3:-11910534 | MS.gene02439:CDS |
GAATGAGCCAAGAAGAGTGG+AGG | 0.612574 | 5.3:-11912485 | MS.gene02439:CDS |
ATGGAATGAGCCAAGAAGAG+TGG | 0.613681 | 5.3:-11912488 | MS.gene02439:CDS |
GGCTTTCCGCTAGAGAAACA+TGG | 0.616376 | 5.3:-11912507 | MS.gene02439:CDS |
GATATTGTTACCGTCCACGC+CGG | 0.620563 | 5.3:-11912610 | MS.gene02439:CDS |
GTGAAGTGGTTGCGAGAGAG+TGG | 0.623822 | 5.3:+11912581 | None:intergenic |
AATGAGCCAAGAAGAGTGGA+GGG | 0.624889 | 5.3:-11912484 | MS.gene02439:CDS |
GCTGAAAAGAAAGTCTTACA+AGG | 0.625036 | 5.3:-11911254 | MS.gene02439:CDS |
CCGTGCTCATCCATCTCCGG+TGG | 0.625588 | 5.3:+11912740 | None:intergenic |
CCGGTGGATAACAACGGCGG+CGG | 0.627964 | 5.3:+11912756 | None:intergenic |
TGCGTGTGTTCCTATACCAA+CGG | 0.630934 | 5.3:+11912666 | None:intergenic |
GTAACGTGTATGGCCAATTG+GGG | 0.635104 | 5.3:-11910836 | MS.gene02439:CDS |
ATCCGGTTTCAGTTTCAGCA+GGG | 0.636572 | 5.3:-11910584 | MS.gene02439:CDS |
ATTATGCAGATGGAAGGATA+GGG | 0.638426 | 5.3:-11911373 | MS.gene02439:CDS |
GGAGGGGTTAGAAAATGTGA+AGG | 0.639727 | 5.3:-11912467 | MS.gene02439:CDS |
GCTGGCATATTGCCAAAGAG+TGG | 0.644997 | 5.3:+11910739 | None:intergenic |
GGGGCTATTATGCAGATGGA+AGG | 0.650368 | 5.3:-11911379 | MS.gene02439:CDS |
GCACGCTCTTGCATTAACTG+TGG | 0.652360 | 5.3:-11911420 | MS.gene02439:CDS |
TCTCTCGCAACCACTTCACA+AGG | 0.655415 | 5.3:-11912577 | MS.gene02439:CDS |
ACTACAGATATTGCTTCATG+GGG | 0.658687 | 5.3:-11910684 | MS.gene02439:CDS |
AGAAACAACGAAGCCCAACT+GGG | 0.659931 | 5.3:-11912535 | MS.gene02439:CDS |
CAAGTTGTGGACATTGCATG+TGG | 0.663017 | 5.3:-11911164 | MS.gene02439:CDS |
TGGAACCAGAGTTCTCAGCT+AGG | 0.674318 | 5.3:-11910660 | MS.gene02439:CDS |
ACGGTGATGAGTTTCGGCGA+CGG | 0.675231 | 5.3:-11912721 | MS.gene02439:CDS |
TGGACGGTAACAATATCAGA+AGG | 0.675890 | 5.3:+11912616 | None:intergenic |
CTCCTGTTTCCGTAGCAGCG+GGG | 0.681037 | 5.3:-11910767 | MS.gene02439:CDS |
CAGATAGTAATGTCACTTTG+GGG | 0.684131 | 5.3:-11910707 | MS.gene02439:CDS |
CCACCGGAGATGGATGAGCA+CGG | 0.687533 | 5.3:-11912740 | MS.gene02439:CDS |
GTTACTTCCAGAACTCAAGA+GGG | 0.707147 | 5.3:+11910854 | None:intergenic |
CCATCTCCGGTGGATAACAA+CGG | 0.710461 | 5.3:+11912750 | None:intergenic |
ATGAGCCAAGAAGAGTGGAG+GGG | 0.735998 | 5.3:-11912483 | MS.gene02439:CDS |
GAGAGTGGTAGTGACCGGCG+TGG | 0.738365 | 5.3:+11912596 | None:intergenic |
CTACAGATATTGCTTCATGG+GGG | 0.740225 | 5.3:-11910683 | MS.gene02439:CDS |
TCTCCGGTGGATAACAACGG+CGG | 0.747275 | 5.3:+11912753 | None:intergenic |
CGCCTGGTTGAAGAACTGCG+TGG | 0.750941 | 5.3:-11911191 | MS.gene02439:CDS |
GTGTGTTCCTATACCAACGG+TGG | 0.765520 | 5.3:+11912669 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATTCTTTTTCTAAATTT+AGG | - | chr5.3:11911303-11911322 | MS.gene02439:CDS | 10.0% |
!!! | ATATGTAATAATTTGCTAAA+AGG | + | chr5.3:11912268-11912287 | None:intergenic | 15.0% |
!!! | TCAATTTTCTCAAATTATTA+CGG | + | chr5.3:11911597-11911616 | None:intergenic | 15.0% |
!! | TTAGTTCAAGAGTAAATTAT+CGG | - | chr5.3:11911187-11911206 | MS.gene02439:CDS | 20.0% |
!! | TTTGGTATATGAAATTGTAA+GGG | - | chr5.3:11911210-11911229 | MS.gene02439:CDS | 20.0% |
!!! | AATGTAGATTATGTTACTTA+CGG | + | chr5.3:11912080-11912099 | None:intergenic | 20.0% |
!!! | ATTGCATAAGTTATGTTTTT+AGG | - | chr5.3:11910976-11910995 | MS.gene02439:intron | 20.0% |
! | CAAAATTTGAAAACCTTCTA+AGG | + | chr5.3:11912754-11912773 | None:intergenic | 25.0% |
! | CCATCTTTAATACAAAGTAT+CGG | - | chr5.3:11911666-11911685 | MS.gene02439:intron | 25.0% |
! | GATATAGAGACTAAATTGAA+TGG | - | chr5.3:11911434-11911453 | MS.gene02439:CDS | 25.0% |
! | GTAAAAGAGCTTATTTGAAT+AGG | + | chr5.3:11911561-11911580 | None:intergenic | 25.0% |
! | GTTTGGTATATGAAATTGTA+AGG | - | chr5.3:11911209-11911228 | MS.gene02439:CDS | 25.0% |
! | TCAATGTTTACGTGATTTAT+TGG | - | chr5.3:11911380-11911399 | MS.gene02439:CDS | 25.0% |
! | TTAAATGTAATCTCATGTGT+CGG | - | chr5.3:11911622-11911641 | MS.gene02439:intron | 25.0% |
! | TTAGTCCCTTAAATTAAAGA+AGG | + | chr5.3:11911460-11911479 | None:intergenic | 25.0% |
!! | AATGGCCTTCTTTAATTTAA+GGG | - | chr5.3:11911452-11911471 | MS.gene02439:intron | 25.0% |
!! | ATTGTTTCTTTGATTGAAAC+AGG | - | chr5.3:11911735-11911754 | MS.gene02439:intron | 25.0% |
!! | CTACATTGCATAATTTTTCA+GGG | - | chr5.3:11912093-11912112 | MS.gene02439:intron | 25.0% |
!! | TCTACATTGCATAATTTTTC+AGG | - | chr5.3:11912092-11912111 | MS.gene02439:intron | 25.0% |
!!! | AATTTAGTCTTTGAAATTGC+AGG | - | chr5.3:11912123-11912142 | MS.gene02439:intron | 25.0% |
!!! | ATTTAGGATCACAATTTTGA+AGG | - | chr5.3:11911319-11911338 | MS.gene02439:CDS | 25.0% |
AAAGAAAGTCTTACAAGGAA+TGG | - | chr5.3:11911945-11911964 | MS.gene02439:intron | 30.0% | |
AAAGAACTAAAGAGTGATCA+AGG | + | chr5.3:11912056-11912075 | None:intergenic | 30.0% | |
ACAATATCAGAAGGTAAAGA+AGG | + | chr5.3:11910572-11910591 | None:intergenic | 30.0% | |
AGACTAACATGCCAATAATA+TGG | - | chr5.3:11911974-11911993 | MS.gene02439:intron | 30.0% | |
ATAACTTATGCAATGCATGT+AGG | + | chr5.3:11910970-11910989 | None:intergenic | 30.0% | |
CCGATACTTTGTATTAAAGA+TGG | + | chr5.3:11911669-11911688 | None:intergenic | 30.0% | |
GACTAACATGCCAATAATAT+GGG | - | chr5.3:11911975-11911994 | MS.gene02439:intron | 30.0% | |
TTAAGCTCTCTTACATTACA+TGG | - | chr5.3:11910931-11910950 | MS.gene02439:intron | 30.0% | |
TTAGAAAATGTGAAGGTTTG+TGG | - | chr5.3:11910734-11910753 | MS.gene02439:CDS | 30.0% | |
TTCCAATTTCCTTATGTTCA+GGG | - | chr5.3:11912184-11912203 | MS.gene02439:intron | 30.0% | |
TTTCCAATTTCCTTATGTTC+AGG | - | chr5.3:11912183-11912202 | MS.gene02439:intron | 30.0% | |
! | AGAAGGTTTTCAAATTTTGC+AGG | - | chr5.3:11912755-11912774 | MS.gene02439:CDS | 30.0% |
! | ATCAGATAGTAATGTCACTT+TGG | - | chr5.3:11912485-11912504 | MS.gene02439:CDS | 30.0% |
! | GAATGGCCTTCTTTAATTTA+AGG | - | chr5.3:11911451-11911470 | MS.gene02439:intron | 30.0% |
! | TCAAGAGTAAATTATCGGTT+TGG | - | chr5.3:11911192-11911211 | MS.gene02439:CDS | 30.0% |
!! | TCAGATAGTAATGTCACTTT+GGG | - | chr5.3:11912486-11912505 | MS.gene02439:CDS | 30.0% |
!!! | ACGTGATTTATTGGTTTTGA+TGG | - | chr5.3:11911389-11911408 | MS.gene02439:CDS | 30.0% |
!!! | TTGCTATTTTGTGAATCCAA+AGG | - | chr5.3:11911485-11911504 | MS.gene02439:intron | 30.0% |
ACTACAGATATTGCTTCATG+GGG | - | chr5.3:11912510-11912529 | MS.gene02439:CDS | 35.0% | |
ATTATGCAGATGGAAGGATA+GGG | - | chr5.3:11911821-11911840 | MS.gene02439:intron | 35.0% | |
CACATCAAAAGGAGAAATGT+GGG | - | chr5.3:11912653-11912672 | MS.gene02439:CDS | 35.0% | |
CTGACAATGTTGATATTGCT+AGG | + | chr5.3:11911066-11911085 | None:intergenic | 35.0% | |
GACTACAGATATTGCTTCAT+GGG | - | chr5.3:11912509-11912528 | MS.gene02439:CDS | 35.0% | |
GCATAGCTTATTCAAACACA+TGG | - | chr5.3:11911693-11911712 | MS.gene02439:intron | 35.0% | |
GCTGAAAAGAAAGTCTTACA+AGG | - | chr5.3:11911940-11911959 | MS.gene02439:intron | 35.0% | |
GTTTGAAAATGCACTTGAAC+TGG | + | chr5.3:11911887-11911906 | None:intergenic | 35.0% | |
TACTATCTGATTCATCAAGC+TGG | + | chr5.3:11912476-11912495 | None:intergenic | 35.0% | |
TATTATGCAGATGGAAGGAT+AGG | - | chr5.3:11911820-11911839 | MS.gene02439:intron | 35.0% | |
TCACATCAAAAGGAGAAATG+TGG | - | chr5.3:11912652-11912671 | MS.gene02439:CDS | 35.0% | |
TCAGAAGGTAAAGAAGGAAT+TGG | + | chr5.3:11910566-11910585 | None:intergenic | 35.0% | |
TCTAAGGAATCCAGGTAAAA+CGG | + | chr5.3:11912738-11912757 | None:intergenic | 35.0% | |
TCTGGTAAAAATGGTAGACT+TGG | - | chr5.3:11912684-11912703 | MS.gene02439:CDS | 35.0% | |
TTCTCCAGAAAACGTAGTTA+AGG | - | chr5.3:11910895-11910914 | MS.gene02439:intron | 35.0% | |
! | AGGTTTTCAAATTTTGCAGG+CGG | - | chr5.3:11912758-11912777 | MS.gene02439:CDS | 35.0% |
! | AGTACCTTAACTACGTTTTC+TGG | + | chr5.3:11910902-11910921 | None:intergenic | 35.0% |
! | TTTTACCTGGATTCCTTAGA+AGG | - | chr5.3:11912738-11912757 | MS.gene02439:CDS | 35.0% |
!! | CAGATAGTAATGTCACTTTG+GGG | - | chr5.3:11912487-11912506 | MS.gene02439:CDS | 35.0% |
AAAAGGAGAAATGTGGGTCT+GGG | - | chr5.3:11912659-11912678 | MS.gene02439:CDS | 40.0% | |
AAGTAACGTGTATGGCCAAT+TGG | - | chr5.3:11912356-11912375 | MS.gene02439:CDS | 40.0% | |
AGATGGAAGGATAGGGAATA+TGG | - | chr5.3:11911828-11911847 | MS.gene02439:intron | 40.0% | |
AGTAACGTGTATGGCCAATT+GGG | - | chr5.3:11912357-11912376 | MS.gene02439:CDS | 40.0% | |
ATCAATCAAGGCAGGAAGAT+AGG | + | chr5.3:11912574-11912593 | None:intergenic | 40.0% | |
ATGGAAGGATAGGGAATATG+GGG | - | chr5.3:11911830-11911849 | MS.gene02439:intron | 40.0% | |
CAACTTTGTCCCTGAACATA+AGG | + | chr5.3:11912196-11912215 | None:intergenic | 40.0% | |
CAATGTTGATATTGCTAGGC+TGG | + | chr5.3:11911062-11911081 | None:intergenic | 40.0% | |
CGTCGAGCAATTAAATCCTT+TGG | + | chr5.3:11911504-11911523 | None:intergenic | 40.0% | |
CTACAGATATTGCTTCATGG+GGG | - | chr5.3:11912511-11912530 | MS.gene02439:CDS | 40.0% | |
CTCATTCCATGTTTCTCTAG+CGG | + | chr5.3:11910696-11910715 | None:intergenic | 40.0% | |
GAATATGGGGAATGATCACT+TGG | - | chr5.3:11911843-11911862 | MS.gene02439:intron | 40.0% | |
GATGGAAGGATAGGGAATAT+GGG | - | chr5.3:11911829-11911848 | MS.gene02439:intron | 40.0% | |
GCACTTGAACTGGAATCTAA+TGG | + | chr5.3:11911877-11911896 | None:intergenic | 40.0% | |
GGACTACAGATATTGCTTCA+TGG | - | chr5.3:11912508-11912527 | MS.gene02439:CDS | 40.0% | |
GGAGTGAACTTTATGTCAAC+AGG | + | chr5.3:11912411-11912430 | None:intergenic | 40.0% | |
GGTAAAGAAGGAATTGGAGT+TGG | + | chr5.3:11910560-11910579 | None:intergenic | 40.0% | |
GTCCCTGAACATAAGGAAAT+TGG | + | chr5.3:11912189-11912208 | None:intergenic | 40.0% | |
GTCTGGGTTTGATCATAATC+TGG | - | chr5.3:11912782-11912801 | MS.gene02439:CDS | 40.0% | |
GTTACTTCCAGAACTCAAGA+GGG | + | chr5.3:11912343-11912362 | None:intergenic | 40.0% | |
TGATTGAAACAGGTCTCGTT+TGG | - | chr5.3:11911745-11911764 | MS.gene02439:intron | 40.0% | |
TGGACGGTAACAATATCAGA+AGG | + | chr5.3:11910581-11910600 | None:intergenic | 40.0% | |
! | CTTTCTTTTCAGCAACTTCG+TGG | + | chr5.3:11911933-11911952 | None:intergenic | 40.0% |
! | GAAAACCTTCTAAGGAATCC+AGG | + | chr5.3:11912746-11912765 | None:intergenic | 40.0% |
!! | AGTTCTGGAAGTAACGTGTA+TGG | - | chr5.3:11912348-11912367 | MS.gene02439:CDS | 40.0% |
!! | CATAATCTGGTTCTTGTTGC+TGG | - | chr5.3:11912795-11912814 | MS.gene02439:CDS | 40.0% |
!!! | CGGTTTTTGGTTTGAAGTTC+CGG | + | chr5.3:11910421-11910440 | None:intergenic | 40.0% |
AAAAGGGGACAACTTGGACT+TGG | - | chr5.3:11910827-11910846 | MS.gene02439:CDS | 45.0% | |
AAACAGGTCTCGTTTGGTTG+GGG | - | chr5.3:11911751-11911770 | MS.gene02439:intron | 45.0% | |
AAAGGAGAAATGTGGGTCTG+GGG | - | chr5.3:11912660-11912679 | MS.gene02439:CDS | 45.0% | |
AACTCTCGAGTACCCTTATC+AGG | - | chr5.3:11912309-11912328 | MS.gene02439:CDS | 45.0% | |
AATAATATGGGAACCTCGCC+TGG | - | chr5.3:11911987-11912006 | MS.gene02439:intron | 45.0% | |
AATCCGGTTTCAGTTTCAGC+AGG | - | chr5.3:11912609-11912628 | MS.gene02439:CDS | 45.0% | |
AATGAGCCAAGAAGAGTGGA+GGG | - | chr5.3:11910710-11910729 | MS.gene02439:CDS | 45.0% | |
AGAAACAACGAAGCCCAACT+GGG | - | chr5.3:11910659-11910678 | MS.gene02439:CDS | 45.0% | |
AGGCGAGGTTCCCATATTAT+TGG | + | chr5.3:11911988-11912007 | None:intergenic | 45.0% | |
AGTCTTACAAGGAATGGCAG+AGG | - | chr5.3:11911951-11911970 | MS.gene02439:intron | 45.0% | |
ATCCGGTTTCAGTTTCAGCA+GGG | - | chr5.3:11912610-11912629 | MS.gene02439:CDS | 45.0% | |
ATGAGCACGGTGATGAGTTT+CGG | - | chr5.3:11910467-11910486 | MS.gene02439:CDS | 45.0% | |
ATGGAATGAGCCAAGAAGAG+TGG | - | chr5.3:11910706-11910725 | MS.gene02439:CDS | 45.0% | |
ATGTCCAAAAGGGGACAACT+TGG | - | chr5.3:11910821-11910840 | MS.gene02439:CDS | 45.0% | |
CAAAAGGAGAAATGTGGGTC+TGG | - | chr5.3:11912658-11912677 | MS.gene02439:CDS | 45.0% | |
CAAGTTGTGGACATTGCATG+TGG | - | chr5.3:11912030-11912049 | MS.gene02439:intron | 45.0% | |
CACTTCACAAGGCGATCTTT+GGG | - | chr5.3:11910628-11910647 | MS.gene02439:CDS | 45.0% | |
CGTTACTTCCAGAACTCAAG+AGG | + | chr5.3:11912344-11912363 | None:intergenic | 45.0% | |
GAAACAGGTCTCGTTTGGTT+GGG | - | chr5.3:11911750-11911769 | MS.gene02439:intron | 45.0% | |
GCTCTTGCATTAACTGTGGA+TGG | - | chr5.3:11911778-11911797 | MS.gene02439:intron | 45.0% | |
GGAGGGGTTAGAAAATGTGA+AGG | - | chr5.3:11910727-11910746 | MS.gene02439:CDS | 45.0% | |
GGCGATCACAGAGAATATTC+CGG | - | chr5.3:11910399-11910418 | MS.gene02439:CDS | 45.0% | |
GTAACGTGTATGGCCAATTG+GGG | - | chr5.3:11912358-11912377 | MS.gene02439:CDS | 45.0% | |
GTCTGGGGATCTGGTAAAAA+TGG | - | chr5.3:11912675-11912694 | MS.gene02439:CDS | 45.0% | |
TAGAAACAACGAAGCCCAAC+TGG | - | chr5.3:11910658-11910677 | MS.gene02439:CDS | 45.0% | |
TCGGTTGCTCTCACATCAAA+AGG | - | chr5.3:11912642-11912661 | MS.gene02439:CDS | 45.0% | |
TGAAACAGGTCTCGTTTGGT+TGG | - | chr5.3:11911749-11911768 | MS.gene02439:intron | 45.0% | |
TGAAGCTGTTCTGCCTTCTA+GGG | - | chr5.3:11910862-11910881 | MS.gene02439:CDS | 45.0% | |
TGCGTGTGTTCCTATACCAA+CGG | + | chr5.3:11910531-11910550 | None:intergenic | 45.0% | |
! | AAATTTTGCAGGCGGTGTCT+GGG | - | chr5.3:11912766-11912785 | MS.gene02439:CDS | 45.0% |
! | AAGTCCAAGTTGTCCCCTTT+TGG | + | chr5.3:11910828-11910847 | None:intergenic | 45.0% |
! | GTTTGTGGTGCTTTTGCTTC+TGG | - | chr5.3:11910749-11910768 | MS.gene02439:CDS | 45.0% |
! | TGATGGGTCTGTTTGGGTTT+GGG | - | chr5.3:11910796-11910815 | MS.gene02439:CDS | 45.0% |
!! | ATGATGGGTCTGTTTGGGTT+TGG | - | chr5.3:11910795-11910814 | MS.gene02439:CDS | 45.0% |
!! | CGTGTTGTGTTGGTGATGAT+GGG | - | chr5.3:11910780-11910799 | MS.gene02439:CDS | 45.0% |
!! | GAAAGTGCTTCAACCCTAGA+AGG | + | chr5.3:11910878-11910897 | None:intergenic | 45.0% |
!! | GGTGTTGTTTCGTGTTGTGT+TGG | - | chr5.3:11910770-11910789 | MS.gene02439:CDS | 45.0% |
!! | TCGTGTTGTGTTGGTGATGA+TGG | - | chr5.3:11910779-11910798 | MS.gene02439:CDS | 45.0% |
!! | TGGTGATGATGGGTCTGTTT+GGG | - | chr5.3:11910790-11910809 | MS.gene02439:CDS | 45.0% |
!! | TTGGTGATGATGGGTCTGTT+TGG | - | chr5.3:11910789-11910808 | MS.gene02439:CDS | 45.0% |
AACAGGTCTCGTTTGGTTGG+GGG | - | chr5.3:11911752-11911771 | MS.gene02439:intron | 50.0% | |
ACAAGGCGATCTTTGGGCTT+GGG | - | chr5.3:11910634-11910653 | MS.gene02439:CDS | 50.0% | |
ACCAGAGTTCTCAGCTAGGA+CGG | - | chr5.3:11912538-11912557 | MS.gene02439:CDS | 50.0% | |
ACTGTGGATGGCAAGCTGTT+TGG | - | chr5.3:11911790-11911809 | MS.gene02439:intron | 50.0% | |
ATCAAGGCAGGAAGATAGGC+AGG | + | chr5.3:11912570-11912589 | None:intergenic | 50.0% | |
ATGAGCCAAGAAGAGTGGAG+GGG | - | chr5.3:11910711-11910730 | MS.gene02439:CDS | 50.0% | |
CAGATATTGCTTCATGGGGG+TGG | - | chr5.3:11912514-11912533 | MS.gene02439:CDS | 50.0% | |
CCAAAGATCGCCTTGTGAAG+TGG | + | chr5.3:11910630-11910649 | None:intergenic | 50.0% | |
CCAACAACCACCGTTGGTAT+AGG | - | chr5.3:11910518-11910537 | MS.gene02439:CDS | 50.0% | |
CCACTTCACAAGGCGATCTT+TGG | - | chr5.3:11910627-11910646 | MS.gene02439:CDS | 50.0% | |
CCATCTCCGGTGGATAACAA+CGG | + | chr5.3:11910447-11910466 | None:intergenic | 50.0% | |
CCTATACCAACGGTGGTTGT+TGG | + | chr5.3:11910521-11910540 | None:intergenic | 50.0% | |
CGAGTACCCTTATCAGGTGA+TGG | - | chr5.3:11912315-11912334 | MS.gene02439:CDS | 50.0% | |
CGTCGTTGTGTGTGAGTTTC+AGG | + | chr5.3:11911010-11911029 | None:intergenic | 50.0% | |
CTGAAGCTGTTCTGCCTTCT+AGG | - | chr5.3:11910861-11910880 | MS.gene02439:CDS | 50.0% | |
CTGTGGATGGCAAGCTGTTT+GGG | - | chr5.3:11911791-11911810 | MS.gene02439:intron | 50.0% | |
GAAACTCACACACAACGACG+AGG | - | chr5.3:11911010-11911029 | MS.gene02439:intron | 50.0% | |
GAATGAGCCAAGAAGAGTGG+AGG | - | chr5.3:11910709-11910728 | MS.gene02439:CDS | 50.0% | |
GATATTGTTACCGTCCACGC+CGG | - | chr5.3:11910584-11910603 | MS.gene02439:CDS | 50.0% | |
GCACGCTCTTGCATTAACTG+TGG | - | chr5.3:11911774-11911793 | MS.gene02439:intron | 50.0% | |
GCTGGCATATTGCCAAAGAG+TGG | + | chr5.3:11912458-11912477 | None:intergenic | 50.0% | |
GGCTTTCCGCTAGAGAAACA+TGG | - | chr5.3:11910687-11910706 | MS.gene02439:CDS | 50.0% | |
GGGCGAGCTAGAGAAGATTT+GGG | - | chr5.3:11912378-11912397 | MS.gene02439:CDS | 50.0% | |
GGGGCTATTATGCAGATGGA+AGG | - | chr5.3:11911815-11911834 | MS.gene02439:intron | 50.0% | |
GGTTTACCAACAACCACCGT+TGG | - | chr5.3:11910512-11910531 | MS.gene02439:CDS | 50.0% | |
GGTTTGGGGGATGTCCAAAA+GGG | - | chr5.3:11910811-11910830 | MS.gene02439:CDS | 50.0% | |
GTGTGTTCCTATACCAACGG+TGG | + | chr5.3:11910528-11910547 | None:intergenic | 50.0% | |
GTTTGGGGGATGTCCAAAAG+GGG | - | chr5.3:11910812-11910831 | MS.gene02439:CDS | 50.0% | |
TCCTGCCTTGATTGATGCGT+TGG | - | chr5.3:11912578-11912597 | MS.gene02439:CDS | 50.0% | |
TCTAACCCCTCCACTCTTCT+TGG | + | chr5.3:11910719-11910738 | None:intergenic | 50.0% | |
TCTCTCGCAACCACTTCACA+AGG | - | chr5.3:11910617-11910636 | MS.gene02439:CDS | 50.0% | |
TGGAACCAGAGTTCTCAGCT+AGG | - | chr5.3:11912534-11912553 | MS.gene02439:CDS | 50.0% | |
! | ACGAGGTCCATTTTGAACCG+GGG | - | chr5.3:11911027-11911046 | MS.gene02439:intron | 50.0% |
! | AGGGCACCATCACCTGATAA+GGG | + | chr5.3:11912324-11912343 | None:intergenic | 50.0% |
! | ATAACAACGGCGGCGGTTTT+TGG | + | chr5.3:11910434-11910453 | None:intergenic | 50.0% |
! | ATGGGTCTGTTTGGGTTTGG+GGG | - | chr5.3:11910798-11910817 | MS.gene02439:CDS | 50.0% |
! | CAAATTTTGCAGGCGGTGTC+TGG | - | chr5.3:11912765-11912784 | MS.gene02439:CDS | 50.0% |
! | CGACGAGGTCCATTTTGAAC+CGG | - | chr5.3:11911025-11911044 | MS.gene02439:intron | 50.0% |
! | GACGAGGTCCATTTTGAACC+GGG | - | chr5.3:11911026-11911045 | MS.gene02439:intron | 50.0% |
! | GATGGGTCTGTTTGGGTTTG+GGG | - | chr5.3:11910797-11910816 | MS.gene02439:CDS | 50.0% |
! | TCCATTTTGAACCGGGGACA+GGG | - | chr5.3:11911033-11911052 | MS.gene02439:intron | 50.0% |
!! | CCTTGATTGATGCGTTGGCT+GGG | - | chr5.3:11912583-11912602 | MS.gene02439:CDS | 50.0% |
!! | CGAAGATGAGCCGTTTTACC+TGG | - | chr5.3:11912725-11912744 | MS.gene02439:CDS | 50.0% |
!! | CTTGATTGATGCGTTGGCTG+GGG | - | chr5.3:11912584-11912603 | MS.gene02439:CDS | 50.0% |
ACCCTGTCCCCGGTTCAAAA+TGG | + | chr5.3:11911037-11911056 | None:intergenic | 55.0% | |
ACGGTGATGAGTTTCGGCGA+CGG | - | chr5.3:11910473-11910492 | MS.gene02439:CDS | 55.0% | |
ACTCCTGTTTCCGTAGCAGC+GGG | - | chr5.3:11912426-11912445 | MS.gene02439:CDS | 55.0% | |
CAAGGCGATCTTTGGGCTTG+GGG | - | chr5.3:11910635-11910654 | MS.gene02439:CDS | 55.0% | |
CACAAGGCGATCTTTGGGCT+TGG | - | chr5.3:11910633-11910652 | MS.gene02439:CDS | 55.0% | |
CACTCCTGTTTCCGTAGCAG+CGG | - | chr5.3:11912425-11912444 | MS.gene02439:CDS | 55.0% | |
CCAGAGTTCTCAGCTAGGAC+GGG | - | chr5.3:11912539-11912558 | MS.gene02439:CDS | 55.0% | |
CCCAGCCAACGCATCAATCA+AGG | + | chr5.3:11912586-11912605 | None:intergenic | 55.0% | |
CCGTTGTTATCCACCGGAGA+TGG | - | chr5.3:11910444-11910463 | MS.gene02439:CDS | 55.0% | |
CGCCCTGCTGAAACTGAAAC+CGG | + | chr5.3:11912615-11912634 | None:intergenic | 55.0% | |
GAAATGTGGGTCTGGGGATC+TGG | - | chr5.3:11912666-11912685 | MS.gene02439:CDS | 55.0% | |
GATGGCAAGCTGTTTGGGTG+GGG | - | chr5.3:11911796-11911815 | MS.gene02439:intron | 55.0% | |
GATGGTGCCCTCTTGAGTTC+TGG | - | chr5.3:11912333-11912352 | MS.gene02439:CDS | 55.0% | |
GCCAACGCATCAATCAAGGC+AGG | + | chr5.3:11912582-11912601 | None:intergenic | 55.0% | |
GGATGGCAAGCTGTTTGGGT+GGG | - | chr5.3:11911795-11911814 | MS.gene02439:intron | 55.0% | |
GGGGCGAGCTAGAGAAGATT+TGG | - | chr5.3:11912377-11912396 | MS.gene02439:CDS | 55.0% | |
GGGTGGGGCTATTATGCAGA+TGG | - | chr5.3:11911811-11911830 | MS.gene02439:intron | 55.0% | |
GGGTTTGGGGGATGTCCAAA+AGG | - | chr5.3:11910810-11910829 | MS.gene02439:CDS | 55.0% | |
GTGAAGTGGTTGCGAGAGAG+TGG | + | chr5.3:11910616-11910635 | None:intergenic | 55.0% | |
TCACCGTGCTCATCCATCTC+CGG | + | chr5.3:11910460-11910479 | None:intergenic | 55.0% | |
TCTCCGGTGGATAACAACGG+CGG | + | chr5.3:11910444-11910463 | None:intergenic | 55.0% | |
TGGATGGCAAGCTGTTTGGG+TGG | - | chr5.3:11911794-11911813 | MS.gene02439:intron | 55.0% | |
TGGTAAACCGAGTGCTCCGT+GGG | + | chr5.3:11910501-11910520 | None:intergenic | 55.0% | |
TTCAGCAGGGCGTGCACATT+CGG | - | chr5.3:11912623-11912642 | MS.gene02439:CDS | 55.0% | |
TTGGTAAACCGAGTGCTCCG+TGG | + | chr5.3:11910502-11910521 | None:intergenic | 55.0% | |
! | CTTCTCTAGCTCGCCCCAAT+TGG | + | chr5.3:11912374-11912393 | None:intergenic | 55.0% |
! | GCCTTGATTGATGCGTTGGC+TGG | - | chr5.3:11912582-11912601 | MS.gene02439:CDS | 55.0% |
! | GTCCATTTTGAACCGGGGAC+AGG | - | chr5.3:11911032-11911051 | MS.gene02439:intron | 55.0% |
! | TGCGAGAGAGTGGTAGTGAC+CGG | + | chr5.3:11910606-11910625 | None:intergenic | 55.0% |
!! | ACTGCGTGGCGTTCAAGTTG+TGG | - | chr5.3:11912017-11912036 | MS.gene02439:intron | 55.0% |
!! | GAGGGCACCATCACCTGATA+AGG | + | chr5.3:11912325-11912344 | None:intergenic | 55.0% |
!! | TGCGTTGGCTGGGGAAAATC+CGG | - | chr5.3:11912593-11912612 | MS.gene02439:CDS | 55.0% |
AACGAAGCCCAACTGGGTCG+TGG | - | chr5.3:11910665-11910684 | MS.gene02439:CDS | 60.0% | |
ACGAAGCCCAACTGGGTCGT+GGG | - | chr5.3:11910666-11910685 | MS.gene02439:CDS | 60.0% | |
AGTTCTCAGCTAGGACGGGC+AGG | - | chr5.3:11912543-11912562 | MS.gene02439:CDS | 60.0% | |
AGTTTCGGCGACGGAACCCA+CGG | - | chr5.3:11910482-11910501 | MS.gene02439:CDS | 60.0% | |
CCACCGGAGATGGATGAGCA+CGG | - | chr5.3:11910454-11910473 | MS.gene02439:CDS | 60.0% | |
CCCGTCCTAGCTGAGAACTC+TGG | + | chr5.3:11912542-11912561 | None:intergenic | 60.0% | |
CGCAGTTCTTCAACCAGGCG+AGG | + | chr5.3:11912003-11912022 | None:intergenic | 60.0% | |
CGCCACGCAGTTCTTCAACC+AGG | + | chr5.3:11912008-11912027 | None:intergenic | 60.0% | |
CGCCTGGTTGAAGAACTGCG+TGG | - | chr5.3:11912003-11912022 | MS.gene02439:intron | 60.0% | |
CTCCTGTTTCCGTAGCAGCG+GGG | - | chr5.3:11912427-11912446 | MS.gene02439:CDS | 60.0% | |
GGAAAGCCCACGACCCAGTT+GGG | + | chr5.3:11910675-11910694 | None:intergenic | 60.0% | |
GTTCTCAGCTAGGACGGGCA+GGG | - | chr5.3:11912544-11912563 | MS.gene02439:CDS | 60.0% | |
AGCCCCGCTGCTACGGAAAC+AGG | + | chr5.3:11912432-11912451 | None:intergenic | 65.0% | |
AGCGGGGCTTGGCCACTCTT+TGG | - | chr5.3:11912443-11912462 | MS.gene02439:CDS | 65.0% | |
CCGCCGCCGTTGTTATCCAC+CGG | - | chr5.3:11910438-11910457 | MS.gene02439:CDS | 65.0% | |
CCGGTGGATAACAACGGCGG+CGG | + | chr5.3:11910441-11910460 | None:intergenic | 65.0% | |
CCGTGCTCATCCATCTCCGG+TGG | + | chr5.3:11910457-11910476 | None:intergenic | 65.0% | |
CGGAAAGCCCACGACCCAGT+TGG | + | chr5.3:11910676-11910695 | None:intergenic | 65.0% | |
GTTTCCGTAGCAGCGGGGCT+TGG | - | chr5.3:11912432-11912451 | MS.gene02439:CDS | 65.0% | |
TAGGCTGGACACCCTGTCCC+CGG | + | chr5.3:11911047-11911066 | None:intergenic | 65.0% | |
! | GACGGAACCCACGGAGCACT+CGG | - | chr5.3:11910491-11910510 | MS.gene02439:CDS | 65.0% |
! | GAGAGTGGTAGTGACCGGCG+TGG | + | chr5.3:11910601-11910620 | None:intergenic | 65.0% |
! | GTGGTAGTGACCGGCGTGGA+CGG | + | chr5.3:11910597-11910616 | None:intergenic | 65.0% |
GTGGCCAAGCCCCGCTGCTA+CGG | + | chr5.3:11912439-11912458 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 11910395 | 11912821 | 11910395 | ID=MS.gene02439 |
chr5.3 | mRNA | 11910395 | 11912821 | 11910395 | ID=MS.gene02439.t1;Parent=MS.gene02439 |
chr5.3 | exon | 11912300 | 11912821 | 11912300 | ID=MS.gene02439.t1.exon1;Parent=MS.gene02439.t1 |
chr5.3 | CDS | 11912300 | 11912821 | 11912300 | ID=cds.MS.gene02439.t1;Parent=MS.gene02439.t1 |
chr5.3 | exon | 11911138 | 11911459 | 11911138 | ID=MS.gene02439.t1.exon2;Parent=MS.gene02439.t1 |
chr5.3 | CDS | 11911138 | 11911459 | 11911138 | ID=cds.MS.gene02439.t1;Parent=MS.gene02439.t1 |
chr5.3 | exon | 11910395 | 11910885 | 11910395 | ID=MS.gene02439.t1.exon3;Parent=MS.gene02439.t1 |
chr5.3 | CDS | 11910395 | 11910885 | 11910395 | ID=cds.MS.gene02439.t1;Parent=MS.gene02439.t1 |
Gene Sequence |
Protein sequence |