Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050470.t1 | XP_013450533.1 | 93 | 444 | 12 | 2 | 1 | 425 | 1 | 444 | 2.10E-127 | 466.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050470.t1 | Q96AY4 | 40.3 | 77 | 43 | 1 | 348 | 421 | 87 | 163 | 1.8e-07 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050470.t1 | A0A072U5A8 | 93.0 | 444 | 12 | 2 | 1 | 425 | 1 | 444 | 1.5e-127 | 466.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050470.t1 | MTR_7g115280 | 93.243 | 444 | 11 | 2 | 1 | 425 | 1 | 444 | 0.0 | 829 |
| MS.gene050470.t1 | MTR_5g012030 | 40.952 | 105 | 59 | 1 | 319 | 420 | 2 | 106 | 2.20e-16 | 82.4 |
| MS.gene050470.t1 | MTR_5g012030 | 34.545 | 110 | 69 | 1 | 319 | 425 | 392 | 501 | 8.99e-15 | 77.4 |
| MS.gene050470.t1 | MTR_4g116160 | 34.066 | 182 | 115 | 3 | 73 | 249 | 70 | 251 | 1.49e-14 | 76.3 |
| MS.gene050470.t1 | MTR_4g116160 | 34.066 | 182 | 115 | 3 | 73 | 249 | 70 | 251 | 5.22e-14 | 75.1 |
| MS.gene050470.t1 | MTR_4g021880 | 24.933 | 373 | 221 | 12 | 18 | 365 | 101 | 439 | 1.66e-13 | 73.2 |
| MS.gene050470.t1 | MTR_4g021880 | 26.518 | 313 | 179 | 9 | 18 | 309 | 101 | 383 | 1.85e-13 | 72.8 |
| MS.gene050470.t1 | MTR_2g006870 | 32.704 | 159 | 100 | 3 | 98 | 255 | 533 | 685 | 6.50e-13 | 71.6 |
| MS.gene050470.t1 | MTR_1g041435 | 34.862 | 109 | 68 | 1 | 323 | 428 | 15 | 123 | 1.28e-12 | 69.3 |
| MS.gene050470.t1 | MTR_5g043640 | 31.737 | 167 | 108 | 4 | 76 | 236 | 56 | 222 | 1.56e-12 | 67.8 |
| MS.gene050470.t1 | MTR_5g043640 | 30.573 | 157 | 82 | 4 | 20 | 175 | 96 | 226 | 6.07e-11 | 63.2 |
| MS.gene050470.t1 | MTR_3g107720 | 29.064 | 203 | 138 | 4 | 113 | 312 | 543 | 742 | 2.00e-12 | 70.1 |
| MS.gene050470.t1 | MTR_5g077770 | 28.634 | 227 | 149 | 5 | 31 | 255 | 522 | 737 | 2.43e-12 | 70.1 |
| MS.gene050470.t1 | MTR_2g096760 | 26.950 | 282 | 158 | 7 | 8 | 267 | 4 | 259 | 2.89e-12 | 68.9 |
| MS.gene050470.t1 | MTR_1g112830 | 32.402 | 179 | 113 | 4 | 73 | 244 | 169 | 346 | 3.10e-12 | 69.3 |
| MS.gene050470.t1 | MTR_5g009930 | 33.884 | 121 | 71 | 2 | 319 | 436 | 2 | 116 | 8.30e-12 | 66.6 |
| MS.gene050470.t1 | MTR_5g009930 | 33.884 | 121 | 71 | 2 | 319 | 436 | 2 | 116 | 2.05e-11 | 65.9 |
| MS.gene050470.t1 | MTR_5g022050 | 28.289 | 152 | 107 | 2 | 98 | 247 | 251 | 402 | 6.37e-11 | 64.7 |
| MS.gene050470.t1 | MTR_2g078020 | 31.967 | 122 | 74 | 3 | 317 | 435 | 460 | 575 | 7.60e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050470.t1 | AT3G04710 | 63.964 | 444 | 134 | 4 | 1 | 425 | 225 | 661 | 0.0 | 552 |
| MS.gene050470.t1 | AT3G04710 | 63.964 | 444 | 134 | 4 | 1 | 425 | 1 | 437 | 0.0 | 551 |
| MS.gene050470.t1 | AT3G04710 | 63.964 | 444 | 133 | 5 | 1 | 425 | 1 | 436 | 0.0 | 546 |
| MS.gene050470.t1 | AT4G12400 | 35.429 | 175 | 96 | 4 | 319 | 476 | 2 | 176 | 1.82e-19 | 91.7 |
| MS.gene050470.t1 | AT4G12400 | 34.545 | 110 | 69 | 1 | 319 | 425 | 369 | 478 | 2.06e-15 | 79.3 |
| MS.gene050470.t1 | AT4G12400 | 35.429 | 175 | 96 | 4 | 319 | 476 | 2 | 176 | 1.84e-19 | 92.0 |
| MS.gene050470.t1 | AT4G12400 | 34.545 | 110 | 69 | 1 | 319 | 425 | 369 | 478 | 1.65e-15 | 79.7 |
| MS.gene050470.t1 | AT1G62740 | 40.000 | 105 | 60 | 1 | 319 | 420 | 2 | 106 | 5.52e-16 | 81.3 |
| MS.gene050470.t1 | AT1G62740 | 34.259 | 108 | 68 | 1 | 321 | 425 | 384 | 491 | 6.56e-15 | 77.8 |
| MS.gene050470.t1 | AT1G12270 | 40.952 | 105 | 59 | 1 | 319 | 420 | 2 | 106 | 5.17e-14 | 75.1 |
| MS.gene050470.t1 | AT1G12270 | 35.185 | 108 | 67 | 1 | 321 | 425 | 385 | 492 | 7.29e-14 | 74.3 |
| MS.gene050470.t1 | AT1G04190 | 37.624 | 101 | 60 | 1 | 323 | 420 | 19 | 119 | 6.96e-14 | 73.2 |
| MS.gene050470.t1 | AT5G37500 | 33.146 | 178 | 115 | 3 | 80 | 255 | 538 | 713 | 2.31e-13 | 73.2 |
| MS.gene050470.t1 | AT5G20350 | 33.696 | 184 | 113 | 4 | 73 | 249 | 65 | 246 | 2.68e-13 | 72.8 |
| MS.gene050470.t1 | AT2G25600 | 27.397 | 219 | 148 | 5 | 109 | 324 | 547 | 757 | 4.56e-11 | 65.9 |
Find 108 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTACCATTGCTAGCAATTT+AGG | 0.149520 | 7.3:+2220519 | MS.gene050470:CDS |
| AGAAGGAATAACATCAATTT+TGG | 0.161591 | 7.3:-2222977 | None:intergenic |
| ATCTGTTGCAGCTGATTCTT+TGG | 0.215917 | 7.3:+2221764 | MS.gene050470:CDS |
| TTTAATTGCTTCCACTGTTT+TGG | 0.221129 | 7.3:-2220307 | None:intergenic |
| AAATTGATGTTATTCCTTCT+TGG | 0.223369 | 7.3:+2222980 | MS.gene050470:CDS |
| ATTGGTCCAAAGCTTGTTAT+AGG | 0.250428 | 7.3:+2224834 | MS.gene050470:CDS |
| CTTCCAGCTGCAACCTGTAT+TGG | 0.297839 | 7.3:-2222913 | None:intergenic |
| TGACAACTACGGTTTATCTT+TGG | 0.308207 | 7.3:-2225398 | None:intergenic |
| CCATCATCAGTTTCAGTATT+GGG | 0.310972 | 7.3:-2221723 | None:intergenic |
| TAACAAGCTTTGGACCAATT+TGG | 0.320936 | 7.3:-2224830 | None:intergenic |
| TTCGGGAACACCGTTGGTTT+GGG | 0.325527 | 7.3:+2220958 | MS.gene050470:CDS |
| TTTAGTCTCTTATCTTTGTA+AGG | 0.326413 | 7.3:-2225434 | None:intergenic |
| ATTCGGGAACACCGTTGGTT+TGG | 0.327829 | 7.3:+2220957 | MS.gene050470:CDS |
| ACACCGTTGGTTTGGGCTGC+TGG | 0.331465 | 7.3:+2220965 | MS.gene050470:CDS |
| TTGCACATTGCAGCTGATAA+TGG | 0.333370 | 7.3:+2222548 | MS.gene050470:CDS |
| TTGCATCATTCTGCTGGAAT+AGG | 0.335655 | 7.3:+2220552 | MS.gene050470:CDS |
| ATTCCTTCTTGGACTATTGA+TGG | 0.346294 | 7.3:+2222991 | MS.gene050470:CDS |
| TCTCATTCATGCTGCACGTC+AGG | 0.349718 | 7.3:+2220452 | MS.gene050470:CDS |
| TTATTCCATAAGACATTTGC+CGG | 0.349921 | 7.3:+2225735 | MS.gene050470:intron |
| TACTTGAGGCACTCGGTCAC+TGG | 0.352056 | 7.3:-2225792 | None:intergenic |
| GATCAGTTCCTGCTTTCAAC+AGG | 0.361386 | 7.3:-2222592 | None:intergenic |
| TCAAGACTTTACTTGTGTAT+AGG | 0.364581 | 7.3:-2224458 | None:intergenic |
| CCCGAATCACTTTCTAAGTC+AGG | 0.367297 | 7.3:-2220941 | None:intergenic |
| TTTACAAGCTCCTTGCTCTC+AGG | 0.376147 | 7.3:-2225022 | None:intergenic |
| TCCTGACTTAGAAAGTGATT+CGG | 0.397766 | 7.3:+2220940 | MS.gene050470:CDS |
| CTCACCTCGTCAGCGACATT+AGG | 0.419673 | 7.3:-2222614 | None:intergenic |
| CCTGACTTAGAAAGTGATTC+GGG | 0.427650 | 7.3:+2220941 | MS.gene050470:CDS |
| CTTTAAGAGATCGAGATTGC+CGG | 0.435481 | 7.3:-2220162 | None:intergenic |
| GCCATCATCAGTTTCAGTAT+TGG | 0.437343 | 7.3:-2221724 | None:intergenic |
| AGGAGCTTGTAAATGCGTTC+AGG | 0.442269 | 7.3:+2225032 | MS.gene050470:CDS |
| GCCTTCCCTATAACAAGCTT+TGG | 0.445915 | 7.3:-2224840 | None:intergenic |
| TTGGTCCAAAGCTTGTTATA+GGG | 0.447025 | 7.3:+2224835 | MS.gene050470:CDS |
| TGCAAGTGCGTCGGAAGCAT+CGG | 0.447294 | 7.3:-2220099 | None:intergenic |
| GAAGCTGGAAGAAAATTTCA+TGG | 0.454075 | 7.3:+2225370 | MS.gene050470:CDS |
| ACGGCTTTGCATCATTCTGC+TGG | 0.454550 | 7.3:+2220546 | MS.gene050470:CDS |
| ATCAAAATCAAGAGGGGATG+AGG | 0.458977 | 7.3:+2224399 | MS.gene050470:CDS |
| ATGCTTAGAGCTGTTAATAC+AGG | 0.462858 | 7.3:+2221788 | MS.gene050470:CDS |
| TAAATGCTAAAGAAAATAAC+CGG | 0.465720 | 7.3:+2223741 | MS.gene050470:CDS |
| TTCCTTCTTGGACTATTGAT+GGG | 0.466672 | 7.3:+2222992 | MS.gene050470:CDS |
| GAAGCTAGGTCAAGCTGAGC+AGG | 0.467307 | 7.3:+2224772 | MS.gene050470:CDS |
| TACAGGGAAGCTGTTGAAGC+TGG | 0.468882 | 7.3:+2225355 | MS.gene050470:intron |
| GTAGAGCATTAAGACCAAAT+TGG | 0.472930 | 7.3:+2224816 | MS.gene050470:CDS |
| TAAGTCAGGATTAACTCCTC+TGG | 0.476327 | 7.3:-2220927 | None:intergenic |
| CTTCCGACGCACTTGCAGTT+AGG | 0.476513 | 7.3:+2220105 | MS.gene050470:CDS |
| GCTAAGTATCTTATTGATCA+TGG | 0.477834 | 7.3:+2220489 | MS.gene050470:CDS |
| GCAAGTGCGTCGGAAGCATC+GGG | 0.488101 | 7.3:-2220098 | None:intergenic |
| TGAATGCAATGTACCATCGC+TGG | 0.498194 | 7.3:-2224729 | None:intergenic |
| ATAAATTCCCTGTTGAAAGC+AGG | 0.500352 | 7.3:+2222584 | MS.gene050470:CDS |
| TTACAAGCTCCTTGCTCTCA+GGG | 0.500721 | 7.3:-2225021 | None:intergenic |
| TTAGTCTCTTATCTTTGTAA+GGG | 0.516825 | 7.3:-2225433 | None:intergenic |
| TAAAAGGAATGACTATCATA+CGG | 0.521638 | 7.3:+2224426 | MS.gene050470:CDS |
| TTGTATGTGCTGGTTGGCAT+TGG | 0.531761 | 7.3:-2225269 | None:intergenic |
| AATACAGGTTGCAGCTGGAA+GGG | 0.537141 | 7.3:+2222915 | MS.gene050470:CDS |
| GGATGGTGTTAAGCCAATAC+AGG | 0.538177 | 7.3:+2222900 | MS.gene050470:intron |
| CAATACAGGTTGCAGCTGGA+AGG | 0.538296 | 7.3:+2222914 | MS.gene050470:CDS |
| GAATGCAATGTACCATCGCT+GGG | 0.539778 | 7.3:-2224728 | None:intergenic |
| AAGCCAATACAGGTTGCAGC+TGG | 0.541821 | 7.3:+2222910 | MS.gene050470:CDS |
| CTCATTCATGCTGCACGTCA+GGG | 0.549715 | 7.3:+2220453 | MS.gene050470:CDS |
| AACACTTGACCCTGAGAGCA+AGG | 0.550632 | 7.3:+2225012 | MS.gene050470:CDS |
| ATACAGGTTGCAGCTGGAAG+GGG | 0.552229 | 7.3:+2222916 | MS.gene050470:CDS |
| ACTTGAGGCACTCGGTCACT+GGG | 0.555469 | 7.3:-2225791 | None:intergenic |
| TGCTAGCAATTTAGGAACCA+CGG | 0.556932 | 7.3:+2220527 | MS.gene050470:CDS |
| AGTCTATGTTGGATGAAGCT+AGG | 0.562469 | 7.3:+2224758 | MS.gene050470:CDS |
| TTCCTCAACGCTGCTCGTAC+CGG | 0.562981 | 7.3:+2220143 | MS.gene050470:CDS |
| ATTCAAATAGAAGTCTATGT+TGG | 0.563771 | 7.3:+2224747 | MS.gene050470:CDS |
| AGACATTTGCCGGTATGATA+CGG | 0.566869 | 7.3:+2225745 | MS.gene050470:intron |
| CCCAATACTGAAACTGATGA+TGG | 0.567416 | 7.3:+2221723 | MS.gene050470:CDS |
| AAAGTAAATGTTAGTGCTGG+TGG | 0.569289 | 7.3:+2222515 | MS.gene050470:CDS |
| CTTGAGCATTTGCTGTCCAG+AGG | 0.572302 | 7.3:+2220911 | MS.gene050470:CDS |
| TCCAAAGCTTGTTATAGGGA+AGG | 0.574646 | 7.3:+2224839 | MS.gene050470:CDS |
| CTGCAACAGATGAAATGAGT+GGG | 0.576458 | 7.3:-2221752 | None:intergenic |
| CCTAAATTGCTAGCAATGGT+AGG | 0.580362 | 7.3:-2220519 | None:intergenic |
| ATCCCATCAATAGTCCAAGA+AGG | 0.585457 | 7.3:-2222994 | None:intergenic |
| GATTAAAGACTTGTATGTGC+TGG | 0.587806 | 7.3:-2225279 | None:intergenic |
| CAGCAGAATCAAAATCAAGA+GGG | 0.593887 | 7.3:+2224392 | MS.gene050470:CDS |
| ATCAGTTCCTGCTTTCAACA+GGG | 0.598606 | 7.3:-2222591 | None:intergenic |
| GGTTGCGGACCGTATCATAC+CGG | 0.600799 | 7.3:-2225754 | None:intergenic |
| GTGTGCGTACATGTCGGTTG+CGG | 0.604226 | 7.3:-2225769 | None:intergenic |
| TTATCAGCTGCAATGTGCAA+AGG | 0.606996 | 7.3:-2222545 | None:intergenic |
| GGTTCCTAAATTGCTAGCAA+TGG | 0.609817 | 7.3:-2220523 | None:intergenic |
| ATCTTCATACTTGAGGCACT+CGG | 0.611271 | 7.3:-2225799 | None:intergenic |
| CTGCCTAACTGCAAGTGCGT+CGG | 0.612225 | 7.3:-2220108 | None:intergenic |
| AAGTGATTCGGGAACACCGT+TGG | 0.612822 | 7.3:+2220952 | MS.gene050470:CDS |
| TGCCGGTACGAGCAGCGTTG+AGG | 0.612947 | 7.3:-2220145 | None:intergenic |
| AAACAGCAGCATCCACAGAC+CGG | 0.613311 | 7.3:-2223760 | None:intergenic |
| ATCAATAAGATACTTAGCAG+TGG | 0.617709 | 7.3:-2220484 | None:intergenic |
| GCAGCAGAATCAAAATCAAG+AGG | 0.620760 | 7.3:+2224391 | MS.gene050470:CDS |
| TCACAAGATCTTCATACTTG+AGG | 0.621429 | 7.3:-2225806 | None:intergenic |
| GCTAAAGTAAATGTTAGTGC+TGG | 0.624109 | 7.3:+2222512 | MS.gene050470:CDS |
| TGATCCTAATGTCGCTGACG+AGG | 0.624801 | 7.3:+2222610 | MS.gene050470:CDS |
| TGACCAGCAGCCCAAACCAA+CGG | 0.624815 | 7.3:-2220968 | None:intergenic |
| ACATGCCAGCAACAAACGCA+AGG | 0.626173 | 7.3:-2224867 | None:intergenic |
| CAAAGATTTATCCAAAACAG+TGG | 0.629444 | 7.3:+2220296 | MS.gene050470:CDS |
| AAAGACTTGTATGTGCTGGT+TGG | 0.634621 | 7.3:-2225275 | None:intergenic |
| GCAGGCTTTAGCTGATGCAA+AGG | 0.635071 | 7.3:+2224790 | MS.gene050470:CDS |
| ATTGATTTGAATCCCAGCGA+TGG | 0.637054 | 7.3:+2224716 | MS.gene050470:CDS |
| ATTAAAGATGCAAACAAGCG+TGG | 0.639246 | 7.3:+2220324 | MS.gene050470:CDS |
| CACTGGGTGTGCGTACATGT+CGG | 0.642594 | 7.3:-2225775 | None:intergenic |
| GCAGCTGGAAGGGGAAATCG+TGG | 0.646088 | 7.3:+2222925 | MS.gene050470:CDS |
| TAAAGAAAATAACCGGTCTG+TGG | 0.653075 | 7.3:+2223748 | MS.gene050470:CDS |
| AGCAGAATGATGCAAAGCCG+TGG | 0.654699 | 7.3:-2220544 | None:intergenic |
| GCTGCAACAGATGAAATGAG+TGG | 0.659045 | 7.3:-2221753 | None:intergenic |
| AGCAGAATCAAAATCAAGAG+GGG | 0.665063 | 7.3:+2224393 | MS.gene050470:CDS |
| ATTTGCGGAACAATTAGACG+AGG | 0.679877 | 7.3:+2220272 | MS.gene050470:CDS |
| TTTGCGGAACAATTAGACGA+GGG | 0.690385 | 7.3:+2220273 | MS.gene050470:CDS |
| GTCACTGTTCTATTAAAACA+TGG | 0.691599 | 7.3:+2221007 | MS.gene050470:CDS |
| TGCAACAGATGAAATGAGTG+GGG | 0.693780 | 7.3:-2221751 | None:intergenic |
| TCGAGAGCAAAATATCCCTG+AGG | 0.758992 | 7.3:+2223784 | MS.gene050470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTATACTAATTAGAA+AGG | + | chr7.3:2225552-2225571 | MS.gene050470:intron | 10.0% |
| !!! | AATTTAGTTTCAAATATTAA+TGG | - | chr7.3:2222860-2222879 | None:intergenic | 10.0% |
| !! | AAAATACAAGAAAATACTAT+TGG | - | chr7.3:2222744-2222763 | None:intergenic | 15.0% |
| !! | AAAGAAAATACATATCAATA+AGG | - | chr7.3:2225486-2225505 | None:intergenic | 15.0% |
| !! | AAATACAAGAAAATACTATT+GGG | - | chr7.3:2222743-2222762 | None:intergenic | 15.0% |
| !! | AATATACTATGTTTATGATT+TGG | + | chr7.3:2221847-2221866 | MS.gene050470:intron | 15.0% |
| !! | ATATTATACTAAGTTCAAAA+AGG | + | chr7.3:2223614-2223633 | MS.gene050470:intron | 15.0% |
| !! | TATTATACTAAGTTCAAAAA+GGG | + | chr7.3:2223615-2223634 | MS.gene050470:intron | 15.0% |
| !!! | TAAATTTTCTACAATTTTCA+TGG | - | chr7.3:2221958-2221977 | None:intergenic | 15.0% |
| !!! | TTATTTTGTTACAAAGAAAA+GGG | + | chr7.3:2223252-2223271 | MS.gene050470:intron | 15.0% |
| !!! | TTTATTTTGTTACAAAGAAA+AGG | + | chr7.3:2223251-2223270 | MS.gene050470:intron | 15.0% |
| !! | AAACATCTATCTAATGAAAA+AGG | + | chr7.3:2222274-2222293 | MS.gene050470:intron | 20.0% |
| !! | AACATCTATCTAATGAAAAA+GGG | + | chr7.3:2222275-2222294 | MS.gene050470:intron | 20.0% |
| !! | AAGTAACACAAATTAAGAAA+TGG | - | chr7.3:2221053-2221072 | None:intergenic | 20.0% |
| !! | AATTGTAGAAAATTTATCAG+TGG | + | chr7.3:2221962-2221981 | MS.gene050470:intron | 20.0% |
| !! | ACATAGTATATTGTTTAGTA+AGG | - | chr7.3:2221839-2221858 | None:intergenic | 20.0% |
| !! | ACTAAATTGAAAACTTAACA+CGG | - | chr7.3:2221619-2221638 | None:intergenic | 20.0% |
| !! | ATACTCTTAAAGTTCAAAAA+GGG | + | chr7.3:2223446-2223465 | MS.gene050470:intron | 20.0% |
| !! | ATCTTGAAATATTATAGCAT+TGG | + | chr7.3:2225591-2225610 | MS.gene050470:intron | 20.0% |
| !! | ATTGTTATGGATATATAACA+TGG | - | chr7.3:2222167-2222186 | None:intergenic | 20.0% |
| !! | CAATATTACAAAAATGTACT+GGG | + | chr7.3:2222224-2222243 | MS.gene050470:intron | 20.0% |
| !! | CATAGTATATTGTTTAGTAA+GGG | - | chr7.3:2221838-2221857 | None:intergenic | 20.0% |
| !! | GAATTCTATATCTATTTGAT+TGG | + | chr7.3:2221138-2221157 | MS.gene050470:intron | 20.0% |
| !! | GTACAGCTAATATATTTAAT+AGG | - | chr7.3:2223818-2223837 | None:intergenic | 20.0% |
| !! | TAAATGCTAAAGAAAATAAC+CGG | + | chr7.3:2223741-2223760 | MS.gene050470:CDS | 20.0% |
| !! | TACATATCAATAAGGTTAAA+AGG | - | chr7.3:2225478-2225497 | None:intergenic | 20.0% |
| !! | TACTAATATGCTTATTACAT+GGG | + | chr7.3:2221561-2221580 | MS.gene050470:intron | 20.0% |
| !! | TAGTTTCAAATATTAATGGA+AGG | - | chr7.3:2222856-2222875 | None:intergenic | 20.0% |
| !! | TATACTCTTAAAGTTCAAAA+AGG | + | chr7.3:2223445-2223464 | MS.gene050470:intron | 20.0% |
| !!! | AACTAAATTTTATGTCTGTT+TGG | + | chr7.3:2222871-2222890 | MS.gene050470:intron | 20.0% |
| !!! | ACTAGCAGTTTAATTTTTAA+TGG | - | chr7.3:2222113-2222132 | None:intergenic | 20.0% |
| !!! | ATTTTGCAATAGTTAATGTA+TGG | + | chr7.3:2225096-2225115 | MS.gene050470:intron | 20.0% |
| !!! | CAGTACATTTTTGTAATATT+GGG | - | chr7.3:2222225-2222244 | None:intergenic | 20.0% |
| !!! | CTTAGTATTTTAAGATAATG+CGG | - | chr7.3:2223182-2223201 | None:intergenic | 20.0% |
| !!! | TATTGTTTTCATAGAATTTG+CGG | + | chr7.3:2220257-2220276 | MS.gene050470:intron | 20.0% |
| !!! | TTTTAAACTTTAAGTGATTG+TGG | + | chr7.3:2223560-2223579 | MS.gene050470:intron | 20.0% |
| ! | AAAAAGAGATAGTTTCTGTT+TGG | - | chr7.3:2220783-2220802 | None:intergenic | 25.0% |
| ! | AAATTGATGTTATTCCTTCT+TGG | + | chr7.3:2222980-2222999 | MS.gene050470:CDS | 25.0% |
| ! | AAGAATAAGCAATTGATCAT+GGG | - | chr7.3:2224252-2224271 | None:intergenic | 25.0% |
| ! | ACATTCATCAACAAAATACA+AGG | - | chr7.3:2222355-2222374 | None:intergenic | 25.0% |
| ! | AGAAAATTTATCAGTGGAAA+TGG | + | chr7.3:2221968-2221987 | MS.gene050470:intron | 25.0% |
| ! | ATTCAAATAGAAGTCTATGT+TGG | + | chr7.3:2224747-2224766 | MS.gene050470:CDS | 25.0% |
| ! | CAATAGTTAATGTATGGTTT+AGG | + | chr7.3:2225102-2225121 | MS.gene050470:intron | 25.0% |
| ! | CAGTAAAATCCAAATATAGA+TGG | - | chr7.3:2222479-2222498 | None:intergenic | 25.0% |
| ! | CATTAGAAAAATGACAACTA+CGG | - | chr7.3:2225412-2225431 | None:intergenic | 25.0% |
| ! | CCAATATTACAAAAATGTAC+TGG | + | chr7.3:2222223-2222242 | MS.gene050470:intron | 25.0% |
| ! | CGTAACAGAATAATAAAGAA+AGG | - | chr7.3:2220584-2220603 | None:intergenic | 25.0% |
| ! | CTACTAATATGCTTATTACA+TGG | + | chr7.3:2221560-2221579 | MS.gene050470:intron | 25.0% |
| ! | CTATAATACATTGTCTCATT+AGG | - | chr7.3:2221479-2221498 | None:intergenic | 25.0% |
| ! | GATCAACTAACTAATTGTTA+TGG | - | chr7.3:2222180-2222199 | None:intergenic | 25.0% |
| ! | TAAAAGGAATGACTATCATA+CGG | + | chr7.3:2224426-2224445 | MS.gene050470:CDS | 25.0% |
| ! | TAAGAATAAGCAATTGATCA+TGG | - | chr7.3:2224253-2224272 | None:intergenic | 25.0% |
| ! | TATGACTGAATACACATAAT+TGG | - | chr7.3:2223939-2223958 | None:intergenic | 25.0% |
| ! | TCAGAAGTTGAAAAATATAC+AGG | - | chr7.3:2222455-2222474 | None:intergenic | 25.0% |
| ! | TGAAAAGATTGGAAAAATCT+TGG | - | chr7.3:2222772-2222791 | None:intergenic | 25.0% |
| ! | TGTAGCTATCCAAATTAAAA+TGG | + | chr7.3:2223291-2223310 | MS.gene050470:intron | 25.0% |
| ! | TTAGTCTCTTATCTTTGTAA+GGG | - | chr7.3:2225436-2225455 | None:intergenic | 25.0% |
| ! | TTCTTATATAAGTAGACTCT+CGG | - | chr7.3:2222720-2222739 | None:intergenic | 25.0% |
| ! | TTCTTTAAACTAACTGATTG+TGG | + | chr7.3:2223387-2223406 | MS.gene050470:intron | 25.0% |
| ! | TTTAGTCTCTTATCTTTGTA+AGG | - | chr7.3:2225437-2225456 | None:intergenic | 25.0% |
| !! | AGAAGGAATAACATCAATTT+TGG | - | chr7.3:2222980-2222999 | None:intergenic | 25.0% |
| !! | ATTTGGATTTTACTGTATAC+AGG | + | chr7.3:2222484-2222503 | MS.gene050470:intron | 25.0% |
| !! | ATTTTCTTGAATAGTTTACG+AGG | + | chr7.3:2221416-2221435 | MS.gene050470:intron | 25.0% |
| !! | CCAGTACATTTTTGTAATAT+TGG | - | chr7.3:2222226-2222245 | None:intergenic | 25.0% |
| !! | GATAGCATAACAAACTTTTA+AGG | - | chr7.3:2222415-2222434 | None:intergenic | 25.0% |
| !! | GTATTCATTCATCTTTTACA+GGG | + | chr7.3:2225339-2225358 | MS.gene050470:intron | 25.0% |
| !! | TGGATATTTAGAGTATCAAT+TGG | + | chr7.3:2221158-2221177 | MS.gene050470:intron | 25.0% |
| !! | TGTATTCATTCATCTTTTAC+AGG | + | chr7.3:2225338-2225357 | MS.gene050470:intron | 25.0% |
| !!! | ATAACAAACTTTTAAGGCTA+CGG | - | chr7.3:2222409-2222428 | None:intergenic | 25.0% |
| !!! | TATGTTCCTCCATTTTAATT+TGG | - | chr7.3:2223303-2223322 | None:intergenic | 25.0% |
| AAAACAACACCAAGATGAAA+GGG | - | chr7.3:2221699-2221718 | None:intergenic | 30.0% | |
| AAATTTATCAGTGGAAATGG+TGG | + | chr7.3:2221971-2221990 | MS.gene050470:intron | 30.0% | |
| AACTAGACTAGATAAACATG+TGG | - | chr7.3:2224606-2224625 | None:intergenic | 30.0% | |
| AATCTTTGTACTGAGTTGTA+AGG | + | chr7.3:2223697-2223716 | MS.gene050470:intron | 30.0% | |
| AATTTATCAGTGGAAATGGT+GGG | + | chr7.3:2221972-2221991 | MS.gene050470:intron | 30.0% | |
| AATTTCCTAACTTCCTCATT+TGG | + | chr7.3:2222645-2222664 | MS.gene050470:intron | 30.0% | |
| ACAGGAAATCTATATTCACT+AGG | - | chr7.3:2222437-2222456 | None:intergenic | 30.0% | |
| ACTTCTGATCCATCTATATT+TGG | + | chr7.3:2222467-2222486 | MS.gene050470:intron | 30.0% | |
| AGCAGGACATAGAAAAAATT+AGG | - | chr7.3:2223067-2223086 | None:intergenic | 30.0% | |
| AGCTATCCAAATTAAAATGG+AGG | + | chr7.3:2223294-2223313 | MS.gene050470:intron | 30.0% | |
| AGTTCTATACTAACATCAGA+AGG | - | chr7.3:2222678-2222697 | None:intergenic | 30.0% | |
| ATAAGAGACTAAAACGTTGT+GGG | + | chr7.3:2225444-2225463 | MS.gene050470:intron | 30.0% | |
| ATAATTGTGTGAACTCATCT+AGG | + | chr7.3:2224345-2224364 | MS.gene050470:intron | 30.0% | |
| ATCAATAAGATACTTAGCAG+TGG | - | chr7.3:2220487-2220506 | None:intergenic | 30.0% | |
| ATCTTTGTACTGAGTTGTAA+GGG | + | chr7.3:2223698-2223717 | MS.gene050470:intron | 30.0% | |
| ATTAAGAAATCCACTTTGTC+AGG | - | chr7.3:2223680-2223699 | None:intergenic | 30.0% | |
| CAAAGATTTATCCAAAACAG+TGG | + | chr7.3:2220296-2220315 | MS.gene050470:CDS | 30.0% | |
| CATATAGATTTATTCCTTGC+TGG | - | chr7.3:2223354-2223373 | None:intergenic | 30.0% | |
| CTATTATGAACCACCTATAA+TGG | - | chr7.3:2225681-2225700 | None:intergenic | 30.0% | |
| GATGTTAGTATAGAACTCAA+TGG | + | chr7.3:2222681-2222700 | MS.gene050470:intron | 30.0% | |
| GCAGGACATAGAAAAAATTA+GGG | - | chr7.3:2223066-2223085 | None:intergenic | 30.0% | |
| GCTAAGTATCTTATTGATCA+TGG | + | chr7.3:2220489-2220508 | MS.gene050470:CDS | 30.0% | |
| GTCACTGTTCTATTAAAACA+TGG | + | chr7.3:2221007-2221026 | MS.gene050470:CDS | 30.0% | |
| TATTTGCCTTGTAGTTTCAT+AGG | + | chr7.3:2223202-2223221 | MS.gene050470:intron | 30.0% | |
| TCAAGACTTTACTTGTGTAT+AGG | - | chr7.3:2224461-2224480 | None:intergenic | 30.0% | |
| TCATTGAGACATAACTAACA+CGG | - | chr7.3:2224556-2224575 | None:intergenic | 30.0% | |
| TCATTTGAGTGACATATTGT+AGG | + | chr7.3:2222077-2222096 | MS.gene050470:intron | 30.0% | |
| TCTTCGTCTTTATCATCAAT+AGG | - | chr7.3:2220420-2220439 | None:intergenic | 30.0% | |
| TTAAGATGTTTCTCCAAACA+TGG | - | chr7.3:2220635-2220654 | None:intergenic | 30.0% | |
| TTATTCCATAAGACATTTGC+CGG | + | chr7.3:2225735-2225754 | MS.gene050470:intron | 30.0% | |
| TTTCTCATTTATCACTCTTC+TGG | + | chr7.3:2224115-2224134 | MS.gene050470:intron | 30.0% | |
| ! | AACATCAATTTTGGATGTCA+CGG | - | chr7.3:2222971-2222990 | None:intergenic | 30.0% |
| ! | ATTGATGATAAAGACGAAGA+CGG | + | chr7.3:2220420-2220439 | MS.gene050470:intron | 30.0% |
| ! | GAGATAATTACGCTTACTTT+TGG | + | chr7.3:2223123-2223142 | MS.gene050470:intron | 30.0% |
| ! | GCTAGTATGATAATGTAATC+AGG | + | chr7.3:2222127-2222146 | MS.gene050470:intron | 30.0% |
| ! | GTTGATGAATGTACCTTAAA+AGG | + | chr7.3:2222363-2222382 | MS.gene050470:intron | 30.0% |
| ! | TGATTTGGATATGTGAAACA+TGG | + | chr7.3:2221862-2221881 | MS.gene050470:intron | 30.0% |
| ! | TTCTTTTTGAATGTGTTTGC+AGG | + | chr7.3:2224691-2224710 | MS.gene050470:intron | 30.0% |
| ! | TTTAATTGCTTCCACTGTTT+TGG | - | chr7.3:2220310-2220329 | None:intergenic | 30.0% |
| !! | TGATATGTGGTTTTTGTTTC+AGG | + | chr7.3:2220875-2220894 | MS.gene050470:intron | 30.0% |
| !!! | GCTGTACTTTTTTCTCAATT+TGG | + | chr7.3:2223831-2223850 | MS.gene050470:intron | 30.0% |
| !!! | TAACAAACTTTTAAGGCTAC+GGG | - | chr7.3:2222408-2222427 | None:intergenic | 30.0% |
| !!! | TAATTTTTTCTATGTCCTGC+TGG | + | chr7.3:2223066-2223085 | MS.gene050470:intron | 30.0% |
| AAATAACCAGCCAAAAACTG+AGG | - | chr7.3:2224054-2224073 | None:intergenic | 35.0% | |
| AAGGGAAGAGATAGATACAT+TGG | + | chr7.3:2222293-2222312 | MS.gene050470:intron | 35.0% | |
| AAGTTATCCTTGAGAGCTTA+TGG | + | chr7.3:2220710-2220729 | MS.gene050470:intron | 35.0% | |
| AATAACCAGCCAAAAACTGA+GGG | - | chr7.3:2224053-2224072 | None:intergenic | 35.0% | |
| AGCAGAATCAAAATCAAGAG+GGG | + | chr7.3:2224393-2224412 | MS.gene050470:CDS | 35.0% | |
| ATAAATTCCCTGTTGAAAGC+AGG | + | chr7.3:2222584-2222603 | MS.gene050470:CDS | 35.0% | |
| ATATGCTTATTACATGGGCA+TGG | + | chr7.3:2221566-2221585 | MS.gene050470:intron | 35.0% | |
| ATCAGAAAGTAAAAAGCAGC+AGG | + | chr7.3:2223032-2223051 | MS.gene050470:CDS | 35.0% | |
| ATCTTACGAGTACAGTTTAC+TGG | + | chr7.3:2225514-2225533 | MS.gene050470:intron | 35.0% | |
| ATGCTTAGAGCTGTTAATAC+AGG | + | chr7.3:2221788-2221807 | MS.gene050470:CDS | 35.0% | |
| ATTAAAGATGCAAACAAGCG+TGG | + | chr7.3:2220324-2220343 | MS.gene050470:CDS | 35.0% | |
| ATTCCTTCTTGGACTATTGA+TGG | + | chr7.3:2222991-2223010 | MS.gene050470:CDS | 35.0% | |
| ATTGAGACATAACTAACACG+GGG | - | chr7.3:2224554-2224573 | None:intergenic | 35.0% | |
| CAAAACAACACCAAGATGAA+AGG | - | chr7.3:2221700-2221719 | None:intergenic | 35.0% | |
| CACGATTCTATGAATGATGT+TGG | - | chr7.3:2222032-2222051 | None:intergenic | 35.0% | |
| CAGAATCCTAAGAAGAAGAA+AGG | - | chr7.3:2224095-2224114 | None:intergenic | 35.0% | |
| CAGCAGAATCAAAATCAAGA+GGG | + | chr7.3:2224392-2224411 | MS.gene050470:CDS | 35.0% | |
| CATATCACAACAAAATCAGC+AGG | - | chr7.3:2220862-2220881 | None:intergenic | 35.0% | |
| CATTGAGACATAACTAACAC+GGG | - | chr7.3:2224555-2224574 | None:intergenic | 35.0% | |
| CCATCATCAGTTTCAGTATT+GGG | - | chr7.3:2221726-2221745 | None:intergenic | 35.0% | |
| GAAGCTGGAAGAAAATTTCA+TGG | + | chr7.3:2225370-2225389 | MS.gene050470:CDS | 35.0% | |
| GATAAGAGACTAAAACGTTG+TGG | + | chr7.3:2225443-2225462 | MS.gene050470:intron | 35.0% | |
| GATTAAAGACTTGTATGTGC+TGG | - | chr7.3:2225282-2225301 | None:intergenic | 35.0% | |
| GATTTGCAGTTATCTTGTTG+AGG | + | chr7.3:2220383-2220402 | MS.gene050470:intron | 35.0% | |
| GCTAAAGTAAATGTTAGTGC+TGG | + | chr7.3:2222512-2222531 | MS.gene050470:CDS | 35.0% | |
| GTTCAAAGCTATAGAAAGCT+GGG | + | chr7.3:2222324-2222343 | MS.gene050470:intron | 35.0% | |
| TAAAGAAAATAACCGGTCTG+TGG | + | chr7.3:2223748-2223767 | MS.gene050470:CDS | 35.0% | |
| TAATAGGAAAACACACCTCA+GGG | - | chr7.3:2223802-2223821 | None:intergenic | 35.0% | |
| TAATGCTTTCCCTTTCATCT+TGG | + | chr7.3:2221687-2221706 | MS.gene050470:intron | 35.0% | |
| TCCTGACTTAGAAAGTGATT+CGG | + | chr7.3:2220940-2220959 | MS.gene050470:CDS | 35.0% | |
| TGACAACCTATGAAACTACA+AGG | - | chr7.3:2223211-2223230 | None:intergenic | 35.0% | |
| TGACAACTACGGTTTATCTT+TGG | - | chr7.3:2225401-2225420 | None:intergenic | 35.0% | |
| TTAATAGGAAAACACACCTC+AGG | - | chr7.3:2223803-2223822 | None:intergenic | 35.0% | |
| TTAATATGGACCGCCATTAT+AGG | + | chr7.3:2225665-2225684 | MS.gene050470:intron | 35.0% | |
| TTATGAACCACCTATAATGG+CGG | - | chr7.3:2225678-2225697 | None:intergenic | 35.0% | |
| TTCCTTCTTGGACTATTGAT+GGG | + | chr7.3:2222992-2223011 | MS.gene050470:CDS | 35.0% | |
| TTTATGTCTGTTTGGATCAC+AGG | + | chr7.3:2222879-2222898 | MS.gene050470:intron | 35.0% | |
| ! | AAAGTAAATGTTAGTGCTGG+TGG | + | chr7.3:2222515-2222534 | MS.gene050470:CDS | 35.0% |
| ! | ACATCAATTTTGGATGTCAC+GGG | - | chr7.3:2222970-2222989 | None:intergenic | 35.0% |
| ! | ATTTTTGTTGCCTGACAAAG+TGG | + | chr7.3:2223667-2223686 | MS.gene050470:intron | 35.0% |
| ! | GCATATTGACTATCGAAATG+TGG | - | chr7.3:2221283-2221302 | None:intergenic | 35.0% |
| ! | GTAGAGCATTAAGACCAAAT+TGG | + | chr7.3:2224816-2224835 | MS.gene050470:CDS | 35.0% |
| !! | ATTGGTCCAAAGCTTGTTAT+AGG | + | chr7.3:2224834-2224853 | MS.gene050470:CDS | 35.0% |
| !! | GCTGATTTTGTTGTGATATG+TGG | + | chr7.3:2220862-2220881 | MS.gene050470:intron | 35.0% |
| !! | TAACAAGCTTTGGACCAATT+TGG | - | chr7.3:2224833-2224852 | None:intergenic | 35.0% |
| !! | TTGGTCCAAAGCTTGTTATA+GGG | + | chr7.3:2224835-2224854 | MS.gene050470:CDS | 35.0% |
| AGAAGGTTATGAGCCAAATG+AGG | - | chr7.3:2222661-2222680 | None:intergenic | 40.0% | |
| AGACATTTGCCGGTATGATA+CGG | + | chr7.3:2225745-2225764 | MS.gene050470:intron | 40.0% | |
| AGGCAAATTGCATGTTGTCA+AGG | + | chr7.3:2225636-2225655 | MS.gene050470:intron | 40.0% | |
| AGTCTATGTTGGATGAAGCT+AGG | + | chr7.3:2224758-2224777 | MS.gene050470:CDS | 40.0% | |
| ATAACCAGCCAAAAACTGAG+GGG | - | chr7.3:2224052-2224071 | None:intergenic | 40.0% | |
| ATCAAAATCAAGAGGGGATG+AGG | + | chr7.3:2224399-2224418 | MS.gene050470:CDS | 40.0% | |
| ATCAGAGACGCTGAAAAGAT+TGG | - | chr7.3:2222783-2222802 | None:intergenic | 40.0% | |
| ATCAGTTCCTGCTTTCAACA+GGG | - | chr7.3:2222594-2222613 | None:intergenic | 40.0% | |
| ATCCCATCAATAGTCCAAGA+AGG | - | chr7.3:2222997-2223016 | None:intergenic | 40.0% | |
| ATGAGCCAAATGAGGAAGTT+AGG | - | chr7.3:2222653-2222672 | None:intergenic | 40.0% | |
| ATTTGCGGAACAATTAGACG+AGG | + | chr7.3:2220272-2220291 | MS.gene050470:CDS | 40.0% | |
| CATTGTGAAAATGGCAATGC+AGG | + | chr7.3:2225616-2225635 | MS.gene050470:intron | 40.0% | |
| CCCAATACTGAAACTGATGA+TGG | + | chr7.3:2221723-2221742 | MS.gene050470:CDS | 40.0% | |
| CCTAAATTGCTAGCAATGGT+AGG | - | chr7.3:2220522-2220541 | None:intergenic | 40.0% | |
| CCTACCATTGCTAGCAATTT+AGG | + | chr7.3:2220519-2220538 | MS.gene050470:CDS | 40.0% | |
| CCTGACTTAGAAAGTGATTC+GGG | + | chr7.3:2220941-2220960 | MS.gene050470:CDS | 40.0% | |
| CGTTCAAAGCTATAGAAAGC+TGG | + | chr7.3:2222323-2222342 | MS.gene050470:intron | 40.0% | |
| CTGCAACAGATGAAATGAGT+GGG | - | chr7.3:2221755-2221774 | None:intergenic | 40.0% | |
| CTTATCCAGTGTAGTGCATA+TGG | + | chr7.3:2222813-2222832 | MS.gene050470:intron | 40.0% | |
| GATTGCTCTATGTCCATGTT+TGG | + | chr7.3:2220619-2220638 | MS.gene050470:intron | 40.0% | |
| GCAACGGATAACAACAAAGA+TGG | - | chr7.3:2224026-2224045 | None:intergenic | 40.0% | |
| GCCATCATCAGTTTCAGTAT+TGG | - | chr7.3:2221727-2221746 | None:intergenic | 40.0% | |
| GGTTCCTAAATTGCTAGCAA+TGG | - | chr7.3:2220526-2220545 | None:intergenic | 40.0% | |
| TAAGTCAGGATTAACTCCTC+TGG | - | chr7.3:2220930-2220949 | None:intergenic | 40.0% | |
| TATCAGTCCATAAGCTCTCA+AGG | - | chr7.3:2220720-2220739 | None:intergenic | 40.0% | |
| TCATACCGGCAAATGTCTTA+TGG | - | chr7.3:2225743-2225762 | None:intergenic | 40.0% | |
| TGCAACAGATGAAATGAGTG+GGG | - | chr7.3:2221754-2221773 | None:intergenic | 40.0% | |
| TGCTAGCAATTTAGGAACCA+CGG | + | chr7.3:2220527-2220546 | MS.gene050470:CDS | 40.0% | |
| TGTCAAGGCTCAGGTTAATA+TGG | + | chr7.3:2225651-2225670 | MS.gene050470:intron | 40.0% | |
| TTATCAGCTGCAATGTGCAA+AGG | - | chr7.3:2222548-2222567 | None:intergenic | 40.0% | |
| TTCATCAAACCTCTGCAACA+AGG | - | chr7.3:2224966-2224985 | None:intergenic | 40.0% | |
| TTGCACATTGCAGCTGATAA+TGG | + | chr7.3:2222548-2222567 | MS.gene050470:CDS | 40.0% | |
| TTGCATCATTCTGCTGGAAT+AGG | + | chr7.3:2220552-2220571 | MS.gene050470:CDS | 40.0% | |
| TTTGCGGAACAATTAGACGA+GGG | + | chr7.3:2220273-2220292 | MS.gene050470:CDS | 40.0% | |
| ! | AAAGACTTGTATGTGCTGGT+TGG | - | chr7.3:2225278-2225297 | None:intergenic | 40.0% |
| ! | ATCTGTTGCAGCTGATTCTT+TGG | + | chr7.3:2221764-2221783 | MS.gene050470:CDS | 40.0% |
| ! | CATCAATTTTGGATGTCACG+GGG | - | chr7.3:2222969-2222988 | None:intergenic | 40.0% |
| ! | CATGGAGTATCTCTGTATCA+TGG | - | chr7.3:2221922-2221941 | None:intergenic | 40.0% |
| ! | CTTCATTTTGCTGCTCTTGA+AGG | + | chr7.3:2220351-2220370 | MS.gene050470:CDS | 40.0% |
| ! | CTTTAAGAGATCGAGATTGC+CGG | - | chr7.3:2220165-2220184 | None:intergenic | 40.0% |
| ! | GCTTTGTTCTTCCTATCATC+TGG | + | chr7.3:2221226-2221245 | MS.gene050470:intron | 40.0% |
| ! | GGATTTTACTGTATACAGGC+AGG | + | chr7.3:2222488-2222507 | MS.gene050470:intron | 40.0% |
| !! | ACTTGTTGAGACGCCTTTTA+AGG | - | chr7.3:2222379-2222398 | None:intergenic | 40.0% |
| !! | AGCTGCAAATGCTTTTTACG+AGG | + | chr7.3:2224985-2225004 | MS.gene050470:CDS | 40.0% |
| !! | ATTGATTTGAATCCCAGCGA+TGG | + | chr7.3:2224716-2224735 | MS.gene050470:CDS | 40.0% |
| !! | ATTTGCTATCCTTGTTGCAG+AGG | + | chr7.3:2224954-2224973 | MS.gene050470:intron | 40.0% |
| !! | GCTGCAAATGCTTTTTACGA+GGG | + | chr7.3:2224986-2225005 | MS.gene050470:CDS | 40.0% |
| !! | GGTTTTTGTTTCAGGAGACA+CGG | + | chr7.3:2220883-2220902 | MS.gene050470:intron | 40.0% |
| !! | TCCAAAGCTTGTTATAGGGA+AGG | + | chr7.3:2224839-2224858 | MS.gene050470:CDS | 40.0% |
| !! | TGCAGAATCGTTTTCTAGAG+TGG | - | chr7.3:2221514-2221533 | None:intergenic | 40.0% |
| !!! | AAACTTTTAAGGCTACGGGA+TGG | - | chr7.3:2222404-2222423 | None:intergenic | 40.0% |
| !!! | AACTTTTAAGGCTACGGGAT+GGG | - | chr7.3:2222403-2222422 | None:intergenic | 40.0% |
| AAAAACTGAGGGGAACGCAA+CGG | - | chr7.3:2224042-2224061 | None:intergenic | 45.0% | |
| AATACAGGTTGCAGCTGGAA+GGG | + | chr7.3:2222915-2222934 | MS.gene050470:CDS | 45.0% | |
| AGACAGTGCACATACTCGAT+AGG | - | chr7.3:2224151-2224170 | None:intergenic | 45.0% | |
| AGACCACAGATCCAGATGAT+AGG | - | chr7.3:2221240-2221259 | None:intergenic | 45.0% | |
| AGCGAGCCTTTCTTCTTCTT+AGG | + | chr7.3:2224086-2224105 | MS.gene050470:intron | 45.0% | |
| AGGAGCTTGTAAATGCGTTC+AGG | + | chr7.3:2225032-2225051 | MS.gene050470:CDS | 45.0% | |
| AGTAGACTCTCGGCATTGTT+TGG | - | chr7.3:2222710-2222729 | None:intergenic | 45.0% | |
| ATATGGACCGCCATTATAGG+TGG | + | chr7.3:2225668-2225687 | MS.gene050470:intron | 45.0% | |
| ATTCCTTAACTCTGTCCAGC+AGG | - | chr7.3:2223084-2223103 | None:intergenic | 45.0% | |
| ATTGCATGTTGTCAAGGCTC+AGG | + | chr7.3:2225642-2225661 | MS.gene050470:intron | 45.0% | |
| CCCGAATCACTTTCTAAGTC+AGG | - | chr7.3:2220944-2220963 | None:intergenic | 45.0% | |
| CTTCCTATCATCTGGATCTG+TGG | + | chr7.3:2221234-2221253 | MS.gene050470:intron | 45.0% | |
| GAAACGTGAATCATGTGTCC+TGG | - | chr7.3:2224925-2224944 | None:intergenic | 45.0% | |
| GAATGCAATGTACCATCGCT+GGG | - | chr7.3:2224731-2224750 | None:intergenic | 45.0% | |
| GACAGTGCACATACTCGATA+GGG | - | chr7.3:2224150-2224169 | None:intergenic | 45.0% | |
| GATCAGTTCCTGCTTTCAAC+AGG | - | chr7.3:2222595-2222614 | None:intergenic | 45.0% | |
| GCCTTCCCTATAACAAGCTT+TGG | - | chr7.3:2224843-2224862 | None:intergenic | 45.0% | |
| GCTGCAACAGATGAAATGAG+TGG | - | chr7.3:2221756-2221775 | None:intergenic | 45.0% | |
| TACTGGGAATCAGTGCTAGT+GGG | + | chr7.3:2222240-2222259 | MS.gene050470:intron | 45.0% | |
| TATTCCTTGCTGGAGAATGC+TGG | - | chr7.3:2223344-2223363 | None:intergenic | 45.0% | |
| TCGAGAGCAAAATATCCCTG+AGG | + | chr7.3:2223784-2223803 | MS.gene050470:CDS | 45.0% | |
| TGAATGCAATGTACCATCGC+TGG | - | chr7.3:2224732-2224751 | None:intergenic | 45.0% | |
| TGCGGTGACTATTGTAAGCA+CGG | - | chr7.3:2223164-2223183 | None:intergenic | 45.0% | |
| TGTCCTGGAGCAAATGTCAA+GGG | - | chr7.3:2224910-2224929 | None:intergenic | 45.0% | |
| TGTCTGTTTGGATCACAGGA+TGG | + | chr7.3:2222883-2222902 | MS.gene050470:intron | 45.0% | |
| TTACAAGCTCCTTGCTCTCA+GGG | - | chr7.3:2225024-2225043 | None:intergenic | 45.0% | |
| TTTACAAGCTCCTTGCTCTC+AGG | - | chr7.3:2225025-2225044 | None:intergenic | 45.0% | |
| ! | GAGGGGATGAGGCTTTTAAA+AGG | + | chr7.3:2224410-2224429 | MS.gene050470:CDS | 45.0% |
| ! | GCATTGGCGCATTGTGAAAA+TGG | + | chr7.3:2225607-2225626 | MS.gene050470:intron | 45.0% |
| ! | GGATGGTGTTAAGCCAATAC+AGG | + | chr7.3:2222900-2222919 | MS.gene050470:intron | 45.0% |
| ! | TGTTTCTGTGCAGTGTTCAC+TGG | + | chr7.3:2224576-2224595 | MS.gene050470:intron | 45.0% |
| !! | TTGTATGTGCTGGTTGGCAT+TGG | - | chr7.3:2225272-2225291 | None:intergenic | 45.0% |
| AAACAGCAGCATCCACAGAC+CGG | - | chr7.3:2223763-2223782 | None:intergenic | 50.0% | |
| AACACTTGACCCTGAGAGCA+AGG | + | chr7.3:2225012-2225031 | MS.gene050470:CDS | 50.0% | |
| AAGCCAATACAGGTTGCAGC+TGG | + | chr7.3:2222910-2222929 | MS.gene050470:CDS | 50.0% | |
| ACATGCCAGCAACAAACGCA+AGG | - | chr7.3:2224870-2224889 | None:intergenic | 50.0% | |
| ACGGCTTTGCATCATTCTGC+TGG | + | chr7.3:2220546-2220565 | MS.gene050470:CDS | 50.0% | |
| AGCAGAATGATGCAAAGCCG+TGG | - | chr7.3:2220547-2220566 | None:intergenic | 50.0% | |
| ATACAGGTTGCAGCTGGAAG+GGG | + | chr7.3:2222916-2222935 | MS.gene050470:CDS | 50.0% | |
| CAAACCAGCATTCTCCAGCA+AGG | + | chr7.3:2223508-2223527 | MS.gene050470:intron | 50.0% | |
| CAATACAGGTTGCAGCTGGA+AGG | + | chr7.3:2222914-2222933 | MS.gene050470:CDS | 50.0% | |
| CACAGCCATATGCACTACAC+TGG | - | chr7.3:2222821-2222840 | None:intergenic | 50.0% | |
| CAGTGTAGTGCATATGGCTG+TGG | + | chr7.3:2222819-2222838 | MS.gene050470:intron | 50.0% | |
| CTCATTCATGCTGCACGTCA+GGG | + | chr7.3:2220453-2220472 | MS.gene050470:CDS | 50.0% | |
| CTTCCAGCTGCAACCTGTAT+TGG | - | chr7.3:2222916-2222935 | None:intergenic | 50.0% | |
| GACATAACTAACACGGGGCA+TGG | - | chr7.3:2224549-2224568 | None:intergenic | 50.0% | |
| GAGCAAATGTCAAGGGGGAA+AGG | - | chr7.3:2224903-2224922 | None:intergenic | 50.0% | |
| GAGTTGTAAGGGCAATGTGC+AGG | + | chr7.3:2223709-2223728 | MS.gene050470:intron | 50.0% | |
| GTACTGGGAATCAGTGCTAG+TGG | + | chr7.3:2222239-2222258 | MS.gene050470:intron | 50.0% | |
| GTCCTGGAGCAAATGTCAAG+GGG | - | chr7.3:2224909-2224928 | None:intergenic | 50.0% | |
| GTGTCCTGGAGCAAATGTCA+AGG | - | chr7.3:2224911-2224930 | None:intergenic | 50.0% | |
| TACAGGGAAGCTGTTGAAGC+TGG | + | chr7.3:2225355-2225374 | MS.gene050470:intron | 50.0% | |
| TCCTGGAGCAAATGTCAAGG+GGG | - | chr7.3:2224908-2224927 | None:intergenic | 50.0% | |
| TCTCATTCATGCTGCACGTC+AGG | + | chr7.3:2220452-2220471 | MS.gene050470:CDS | 50.0% | |
| TGATCCTAATGTCGCTGACG+AGG | + | chr7.3:2222610-2222629 | MS.gene050470:CDS | 50.0% | |
| TGTCAAGGGGGAAAGGTTTC+AGG | - | chr7.3:2224896-2224915 | None:intergenic | 50.0% | |
| TGTCCTGCTGGACAGAGTTA+AGG | + | chr7.3:2223078-2223097 | MS.gene050470:intron | 50.0% | |
| ! | AAGTGATTCGGGAACACCGT+TGG | + | chr7.3:2220952-2220971 | MS.gene050470:CDS | 50.0% |
| ! | ATTCGGGAACACCGTTGGTT+TGG | + | chr7.3:2220957-2220976 | MS.gene050470:CDS | 50.0% |
| ! | GCAGGCTTTAGCTGATGCAA+AGG | + | chr7.3:2224790-2224809 | MS.gene050470:CDS | 50.0% |
| ! | GTTGCGTTCCCCTCAGTTTT+TGG | + | chr7.3:2224041-2224060 | MS.gene050470:intron | 50.0% |
| !! | CTTGAGCATTTGCTGTCCAG+AGG | + | chr7.3:2220911-2220930 | MS.gene050470:CDS | 50.0% |
| !! | TTCGGGAACACCGTTGGTTT+GGG | + | chr7.3:2220958-2220977 | MS.gene050470:CDS | 50.0% |
| CAAGCCAGCATTCTCCAGCA+AGG | + | chr7.3:2223337-2223356 | MS.gene050470:intron | 55.0% | |
| CACTGGGTGTGCGTACATGT+CGG | - | chr7.3:2225778-2225797 | None:intergenic | 55.0% | |
| CTCACCTCGTCAGCGACATT+AGG | - | chr7.3:2222617-2222636 | None:intergenic | 55.0% | |
| CTGCCTAACTGCAAGTGCGT+CGG | - | chr7.3:2220111-2220130 | None:intergenic | 55.0% | |
| CTTCCGACGCACTTGCAGTT+AGG | + | chr7.3:2220105-2220124 | MS.gene050470:CDS | 55.0% | |
| GAAGCTAGGTCAAGCTGAGC+AGG | + | chr7.3:2224772-2224791 | MS.gene050470:CDS | 55.0% | |
| GGTTGCGGACCGTATCATAC+CGG | - | chr7.3:2225757-2225776 | None:intergenic | 55.0% | |
| TCCCCCTTGACATTTGCTCC+AGG | + | chr7.3:2224904-2224923 | MS.gene050470:intron | 55.0% | |
| TGACCAGCAGCCCAAACCAA+CGG | - | chr7.3:2220971-2220990 | None:intergenic | 55.0% | |
| TTCCTCAACGCTGCTCGTAC+CGG | + | chr7.3:2220143-2220162 | MS.gene050470:CDS | 55.0% | |
| ! | ACTTGAGGCACTCGGTCACT+GGG | - | chr7.3:2225794-2225813 | None:intergenic | 55.0% |
| ! | GTGTGCGTACATGTCGGTTG+CGG | - | chr7.3:2225772-2225791 | None:intergenic | 55.0% |
| ! | TACTTGAGGCACTCGGTCAC+TGG | - | chr7.3:2225795-2225814 | None:intergenic | 55.0% |
| ! | TGCAAGTGCGTCGGAAGCAT+CGG | - | chr7.3:2220102-2220121 | None:intergenic | 55.0% |
| !!! | CGTTCCCCTCAGTTTTTGGC+TGG | + | chr7.3:2224045-2224064 | MS.gene050470:intron | 55.0% |
| GCAGCTGGAAGGGGAAATCG+TGG | + | chr7.3:2222925-2222944 | MS.gene050470:CDS | 60.0% | |
| ! | CGCAGCCTTGCGTTTGTTGC+TGG | + | chr7.3:2224862-2224881 | MS.gene050470:intron | 60.0% |
| !! | ACACCGTTGGTTTGGGCTGC+TGG | + | chr7.3:2220965-2220984 | MS.gene050470:CDS | 60.0% |
| !! | GCAAGTGCGTCGGAAGCATC+GGG | - | chr7.3:2220101-2220120 | None:intergenic | 60.0% |
| TGCCGGTACGAGCAGCGTTG+AGG | - | chr7.3:2220148-2220167 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 2220092 | 2225817 | 2220092 | ID=MS.gene050470 |
| chr7.3 | mRNA | 2220092 | 2225817 | 2220092 | ID=MS.gene050470.t1;Parent=MS.gene050470 |
| chr7.3 | exon | 2220092 | 2220185 | 2220092 | ID=MS.gene050470.t1.exon1;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2220092 | 2220185 | 2220092 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2220271 | 2220390 | 2220271 | ID=MS.gene050470.t1.exon2;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2220271 | 2220390 | 2220271 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2220439 | 2220573 | 2220439 | ID=MS.gene050470.t1.exon3;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2220439 | 2220573 | 2220439 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2220897 | 2221036 | 2220897 | ID=MS.gene050470.t1.exon4;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2220897 | 2221036 | 2220897 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2221723 | 2221809 | 2221723 | ID=MS.gene050470.t1.exon5;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2221723 | 2221809 | 2221723 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2222506 | 2222631 | 2222506 | ID=MS.gene050470.t1.exon6;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2222506 | 2222631 | 2222506 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2222901 | 2223053 | 2222901 | ID=MS.gene050470.t1.exon7;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2222901 | 2223053 | 2222901 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2223731 | 2223805 | 2223731 | ID=MS.gene050470.t1.exon8;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2223731 | 2223805 | 2223731 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2224367 | 2224468 | 2224367 | ID=MS.gene050470.t1.exon9;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2224367 | 2224468 | 2224367 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2224713 | 2224876 | 2224713 | ID=MS.gene050470.t1.exon10;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2224713 | 2224876 | 2224713 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2224976 | 2225053 | 2224976 | ID=MS.gene050470.t1.exon11;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2224976 | 2225053 | 2224976 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2225264 | 2225322 | 2225264 | ID=MS.gene050470.t1.exon12;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2225264 | 2225322 | 2225264 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2225360 | 2225461 | 2225360 | ID=MS.gene050470.t1.exon13;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2225360 | 2225461 | 2225360 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| chr7.3 | exon | 2225747 | 2225817 | 2225747 | ID=MS.gene050470.t1.exon14;Parent=MS.gene050470.t1 |
| chr7.3 | CDS | 2225747 | 2225817 | 2225747 | ID=cds.MS.gene050470.t1;Parent=MS.gene050470.t1 |
| Gene Sequence |
| Protein sequence |
