Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024651.t1 | XP_003611052.1 | 96 | 374 | 8 | 1 | 1 | 367 | 1 | 374 | 1.50E-196 | 695.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024651.t1 | Q0JL44 | 64.1 | 368 | 124 | 3 | 2 | 367 | 6 | 367 | 5.0e-127 | 455.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024651.t1 | G7KBZ4 | 96.0 | 374 | 8 | 1 | 1 | 367 | 1 | 374 | 1.1e-196 | 695.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024651 | MS.gene83993 | PPI |
| MS.gene024651 | MS.gene81472 | PPI |
| MS.gene95813 | MS.gene024651 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024651.t1 | MTR_5g009930 | 95.989 | 374 | 8 | 1 | 1 | 367 | 1 | 374 | 0.0 | 736 |
| MS.gene024651.t1 | MTR_5g009930 | 95.066 | 304 | 8 | 1 | 1 | 297 | 1 | 304 | 0.0 | 590 |
| MS.gene024651.t1 | MTR_6g053290 | 62.567 | 374 | 116 | 5 | 1 | 367 | 1 | 357 | 4.35e-164 | 463 |
| MS.gene024651.t1 | MTR_6g053290 | 59.694 | 392 | 116 | 6 | 1 | 367 | 1 | 375 | 2.31e-159 | 452 |
| MS.gene024651.t1 | MTR_5g012030 | 38.835 | 103 | 63 | 0 | 1 | 103 | 1 | 103 | 1.16e-16 | 81.6 |
| MS.gene024651.t1 | MTR_5g012030 | 29.060 | 117 | 83 | 0 | 1 | 117 | 391 | 507 | 8.28e-12 | 67.0 |
| MS.gene024651.t1 | MTR_3g452710 | 34.211 | 114 | 75 | 0 | 2 | 115 | 11 | 124 | 1.17e-15 | 78.6 |
| MS.gene024651.t1 | MTR_3g452710 | 34.211 | 114 | 75 | 0 | 2 | 115 | 11 | 124 | 1.28e-15 | 78.2 |
| MS.gene024651.t1 | MTR_6g060735 | 43.000 | 100 | 39 | 4 | 207 | 299 | 59 | 147 | 1.01e-13 | 68.9 |
| MS.gene024651.t1 | MTR_7g115280 | 31.250 | 112 | 77 | 0 | 2 | 113 | 335 | 446 | 4.58e-12 | 67.4 |
| MS.gene024651.t1 | MTR_6g060740 | 46.154 | 78 | 31 | 2 | 222 | 297 | 4 | 72 | 1.84e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024651.t1 | AT4G23570 | 65.323 | 372 | 100 | 8 | 1 | 366 | 1 | 349 | 5.95e-157 | 445 |
| MS.gene024651.t1 | AT4G23570 | 65.323 | 372 | 100 | 8 | 1 | 366 | 1 | 349 | 5.95e-157 | 445 |
| MS.gene024651.t1 | AT4G11260 | 63.415 | 369 | 122 | 5 | 1 | 367 | 1 | 358 | 1.69e-156 | 444 |
| MS.gene024651.t1 | AT4G23570 | 65.147 | 373 | 100 | 9 | 1 | 366 | 1 | 350 | 3.08e-155 | 441 |
| MS.gene024651.t1 | AT2G42810 | 29.747 | 158 | 110 | 1 | 2 | 159 | 13 | 169 | 1.43e-16 | 81.6 |
| MS.gene024651.t1 | AT2G42810 | 29.747 | 158 | 110 | 1 | 2 | 159 | 13 | 169 | 1.56e-16 | 81.3 |
| MS.gene024651.t1 | AT2G42810 | 31.944 | 144 | 96 | 2 | 2 | 145 | 13 | 154 | 7.25e-16 | 79.3 |
| MS.gene024651.t1 | AT2G42810 | 31.944 | 144 | 96 | 2 | 2 | 145 | 13 | 154 | 7.25e-16 | 79.3 |
| MS.gene024651.t1 | AT2G42810 | 31.944 | 144 | 96 | 2 | 2 | 145 | 13 | 154 | 7.25e-16 | 79.3 |
| MS.gene024651.t1 | AT4G12400 | 34.783 | 115 | 75 | 0 | 1 | 115 | 1 | 115 | 1.07e-15 | 79.0 |
| MS.gene024651.t1 | AT4G12400 | 31.858 | 113 | 77 | 0 | 1 | 113 | 368 | 480 | 1.68e-13 | 72.0 |
| MS.gene024651.t1 | AT4G12400 | 34.783 | 115 | 75 | 0 | 1 | 115 | 1 | 115 | 1.14e-15 | 79.0 |
| MS.gene024651.t1 | AT4G12400 | 31.858 | 113 | 77 | 0 | 1 | 113 | 368 | 480 | 1.61e-13 | 72.0 |
| MS.gene024651.t1 | AT1G04190 | 34.091 | 132 | 77 | 2 | 5 | 129 | 18 | 146 | 1.30e-15 | 77.4 |
| MS.gene024651.t1 | AT1G62740 | 38.614 | 101 | 62 | 0 | 1 | 101 | 1 | 101 | 7.44e-15 | 76.3 |
| MS.gene024651.t1 | AT1G62740 | 29.365 | 126 | 89 | 0 | 1 | 126 | 381 | 506 | 4.00e-12 | 67.8 |
| MS.gene024651.t1 | AT1G12270 | 36.634 | 101 | 64 | 0 | 1 | 101 | 1 | 101 | 2.21e-14 | 74.7 |
| MS.gene024651.t1 | AT1G12270 | 29.365 | 126 | 89 | 0 | 1 | 126 | 382 | 507 | 5.24e-12 | 67.4 |
| MS.gene024651.t1 | AT3G04710 | 34.737 | 95 | 62 | 0 | 8 | 102 | 558 | 652 | 2.81e-13 | 71.6 |
| MS.gene024651.t1 | AT3G04710 | 31.429 | 105 | 72 | 0 | 8 | 112 | 333 | 437 | 4.36e-13 | 70.5 |
| MS.gene024651.t1 | AT3G04710 | 31.429 | 105 | 72 | 0 | 8 | 112 | 334 | 438 | 4.41e-13 | 70.5 |
| MS.gene024651.t1 | AT4G22670 | 38.636 | 88 | 54 | 0 | 2 | 89 | 123 | 210 | 5.54e-12 | 67.0 |
Find 88 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAGACGAATTTCAATTT+TGG | 0.202093 | 5.1:+3377033 | None:intergenic |
| TAAAATTCAAACCTGTATTT+TGG | 0.207831 | 5.1:+3378056 | None:intergenic |
| AGATAAGCTTTAGACAAATT+AGG | 0.217599 | 5.1:+3379326 | None:intergenic |
| TCATGTCCTCATCTGCATTT+TGG | 0.223925 | 5.1:+3375982 | None:intergenic |
| TGCATTTGTTTGGGATTCTT+TGG | 0.233284 | 5.1:+3378094 | None:intergenic |
| CTGAAGGCACGATTATCTTT+TGG | 0.246738 | 5.1:+3376957 | None:intergenic |
| ACCACAACTTTGCACTTATC+AGG | 0.255504 | 5.1:+3377064 | None:intergenic |
| TTGAATCAAATTAGTGAATC+TGG | 0.262555 | 5.1:+3379122 | None:intergenic |
| AATTACCAACCTCGATTGTT+TGG | 0.273321 | 5.1:-3377267 | MS.gene024651:CDS |
| GATAAGCTTTAGACAAATTA+GGG | 0.273607 | 5.1:+3379327 | None:intergenic |
| CTGGTGCAACTGCATTTGTT+TGG | 0.277385 | 5.1:+3378084 | None:intergenic |
| CAAAAGCTGAAGCAATTAAT+TGG | 0.291230 | 5.1:-3377012 | MS.gene024651:CDS |
| CAACCACTTCTTCTGGCTTC+TGG | 0.307212 | 5.1:+3377526 | None:intergenic |
| AACAGACGCAGCAGATGATT+TGG | 0.309310 | 5.1:+3378154 | None:intergenic |
| AGCTGTTTCTGATGCTAATA+AGG | 0.317013 | 5.1:-3379363 | MS.gene024651:CDS |
| ATTGTCACAACCACTTCTTC+TGG | 0.326332 | 5.1:+3377519 | None:intergenic |
| TTCTTCACCTCCATGCCTTC+CGG | 0.334065 | 5.1:+3375739 | None:intergenic |
| CATCACTCTTATCACACATA+TGG | 0.343614 | 5.1:+3378123 | None:intergenic |
| GCAGATGATTTGGGTTCATT+TGG | 0.361318 | 5.1:+3378164 | None:intergenic |
| TGGTGCAACTGCATTTGTTT+GGG | 0.369271 | 5.1:+3378085 | None:intergenic |
| GAACAGTGCTTTCAACTGAT+TGG | 0.383406 | 5.1:-3375798 | MS.gene024651:CDS |
| AGTGTTACCATTGATGTTCC+TGG | 0.384771 | 5.1:-3377303 | MS.gene024651:CDS |
| TGCTAAGATTGCACTTGAAA+AGG | 0.395581 | 5.1:-3379169 | MS.gene024651:CDS |
| ATTTGGGTTCATTTGGTGGT+AGG | 0.397979 | 5.1:+3378171 | None:intergenic |
| GCTAAGATTGCACTTGAAAA+GGG | 0.398330 | 5.1:-3379168 | MS.gene024651:CDS |
| TGGGATCGATTTCGATGGCT+TGG | 0.399437 | 5.1:+3379447 | None:intergenic |
| GACTAAGGATTGGGATAAGT+TGG | 0.404465 | 5.1:-3376583 | MS.gene024651:CDS |
| CAAATTAGGGTTCAATTGAA+TGG | 0.412131 | 5.1:+3379340 | None:intergenic |
| ACAGACGCAGCAGATGATTT+GGG | 0.413414 | 5.1:+3378155 | None:intergenic |
| CAAAAGATAATCGTGCCTTC+AGG | 0.416666 | 5.1:-3376956 | MS.gene024651:intron |
| AGCAATTAATTGGACATCTC+TGG | 0.420967 | 5.1:-3377002 | MS.gene024651:CDS |
| GTTGTGACAATATTTGCAAA+AGG | 0.432373 | 5.1:-3377507 | MS.gene024651:CDS |
| GACTTTGATGACGGATATGC+AGG | 0.432961 | 5.1:+3376609 | None:intergenic |
| AAGGCATGGAGGTGAAGAAA+TGG | 0.447230 | 5.1:-3375735 | MS.gene024651:CDS |
| GGGATCGATTTCGATGGCTT+GGG | 0.456570 | 5.1:+3379448 | None:intergenic |
| GAGAAAGAAGAAAAGCTTGA+TGG | 0.457639 | 5.1:-3376041 | MS.gene024651:CDS |
| TTTGGGTTCATTTGGTGGTA+GGG | 0.457656 | 5.1:+3378172 | None:intergenic |
| GAAAATGTTGTTGTGGACTT+TGG | 0.457793 | 5.1:-3377474 | MS.gene024651:CDS |
| TTCAACTGATTGGAAAGAAG+TGG | 0.459056 | 5.1:-3375788 | MS.gene024651:CDS |
| CAAAGTCAAGGACTAAGGAT+TGG | 0.459819 | 5.1:-3376593 | MS.gene024651:CDS |
| AACCAAAATTGAAATTCGTC+TGG | 0.463865 | 5.1:-3377035 | MS.gene024651:CDS |
| GGCGAAGAGATTGGCGTTGG+TGG | 0.466384 | 5.1:+3379427 | None:intergenic |
| TGCTCGATCGGCGAAGAGAT+TGG | 0.468339 | 5.1:+3379418 | None:intergenic |
| ATCACTCTTATCACACATAT+GGG | 0.469660 | 5.1:+3378124 | None:intergenic |
| GATGATTTGGGTTCATTTGG+TGG | 0.474276 | 5.1:+3378167 | None:intergenic |
| CACCAGTCAGACCAAAATAC+AGG | 0.477363 | 5.1:-3378067 | MS.gene024651:intron |
| AAAGTCAAGGACTAAGGATT+GGG | 0.477566 | 5.1:-3376592 | MS.gene024651:CDS |
| CAATCGAGGTTGGTAATTGT+AGG | 0.478085 | 5.1:+3377272 | None:intergenic |
| TAATTGTAGGCGTCTTGGCC+AGG | 0.479845 | 5.1:+3377285 | None:intergenic |
| GTTGGTAATTGTAGGCGTCT+TGG | 0.491426 | 5.1:+3377280 | None:intergenic |
| GTCATCAAAGTCAAGGACTA+AGG | 0.505114 | 5.1:-3376598 | MS.gene024651:CDS |
| TTGTGACAATATTTGCAAAA+GGG | 0.517563 | 5.1:-3377506 | MS.gene024651:CDS |
| CTAAAGCTTATCTTCGCAAA+GGG | 0.517803 | 5.1:-3379316 | MS.gene024651:intron |
| AGGCATGGAGGTGAAGAAAT+GGG | 0.525573 | 5.1:-3375734 | MS.gene024651:CDS |
| GTGGGATCAAAGAAGGTGGA+AGG | 0.527275 | 5.1:-3375769 | MS.gene024651:CDS |
| ACCTGATAAGTGCAAAGTTG+TGG | 0.535317 | 5.1:-3377065 | MS.gene024651:CDS |
| TCTAAAGCTTATCTTCGCAA+AGG | 0.536711 | 5.1:-3379317 | MS.gene024651:CDS |
| TGTCAACGCTTCATTGCTGC+TGG | 0.540905 | 5.1:-3379096 | MS.gene024651:intron |
| TTGGTGGTAGGGTGCTCGTA+AGG | 0.545824 | 5.1:+3378183 | None:intergenic |
| TTAGTCCTTGACTTTGATGA+CGG | 0.547734 | 5.1:+3376600 | None:intergenic |
| GAAAGAAGTGGGATCAAAGA+AGG | 0.549782 | 5.1:-3375776 | MS.gene024651:CDS |
| AGAAGTGGGATCAAAGAAGG+TGG | 0.550429 | 5.1:-3375773 | MS.gene024651:CDS |
| TCAACTGATTGGAAAGAAGT+GGG | 0.552602 | 5.1:-3375787 | MS.gene024651:CDS |
| AGGAAGTCCTCCGGAAGGCA+TGG | 0.553293 | 5.1:-3375749 | MS.gene024651:CDS |
| ACATTGCAGCTGGAGTCAAA+TGG | 0.555676 | 5.1:-3375820 | MS.gene024651:intron |
| GATATAAGATTGTGCTCGAT+CGG | 0.556317 | 5.1:+3379406 | None:intergenic |
| CCTTTCCAAACAATCGAGGT+TGG | 0.558787 | 5.1:+3377262 | None:intergenic |
| TTCACCTCCATGCCTTCCGG+AGG | 0.562191 | 5.1:+3375742 | None:intergenic |
| ATCGGCGAAGAGATTGGCGT+TGG | 0.564003 | 5.1:+3379424 | None:intergenic |
| TTAGTGAATCTGGAATCATC+AGG | 0.564312 | 5.1:+3379132 | None:intergenic |
| TTACCAGAAGCCAGAAGAAG+TGG | 0.567554 | 5.1:-3377529 | MS.gene024651:CDS |
| GTTGGTGGGATCGATTTCGA+TGG | 0.572118 | 5.1:+3379442 | None:intergenic |
| CCAACCTCGATTGTTTGGAA+AGG | 0.572336 | 5.1:-3377262 | MS.gene024651:intron |
| GCGAAGAGATTGGCGTTGGT+GGG | 0.574698 | 5.1:+3379428 | None:intergenic |
| GTCTTGGCCAGGAACATCAA+TGG | 0.575737 | 5.1:+3377296 | None:intergenic |
| GAAGGTGGAAGGAAGTCCTC+CGG | 0.593651 | 5.1:-3375758 | MS.gene024651:CDS |
| GACATCTCTGGAATATAGCA+AGG | 0.594841 | 5.1:-3376990 | MS.gene024651:CDS |
| TTTCCGCAGTTCAATCTGAA+AGG | 0.595545 | 5.1:-3376632 | MS.gene024651:intron |
| CTAAGATTGCACTTGAAAAG+GGG | 0.595811 | 5.1:-3379167 | MS.gene024651:CDS |
| ACCAGCAGAAAATGTTGTTG+TGG | 0.599108 | 5.1:-3377481 | MS.gene024651:CDS |
| CATATCCGTCATCAAAGTCA+AGG | 0.618238 | 5.1:-3376605 | MS.gene024651:CDS |
| GTTACCTTTCCAAACAATCG+AGG | 0.633356 | 5.1:+3377258 | None:intergenic |
| TAAGATTGCACTTGAAAAGG+GGG | 0.634057 | 5.1:-3379166 | MS.gene024651:CDS |
| TATTTACCAAAATGCAGATG+AGG | 0.640349 | 5.1:-3375988 | MS.gene024651:CDS |
| AAAATGCAGATGAGGACATG+AGG | 0.646902 | 5.1:-3375980 | MS.gene024651:CDS |
| GTGGAAGGAAGTCCTCCGGA+AGG | 0.675797 | 5.1:-3375754 | MS.gene024651:CDS |
| AAGTCCTCCGGAAGGCATGG+AGG | 0.703156 | 5.1:-3375746 | MS.gene024651:CDS |
| GGCTTGGGAGTAGAAATCAA+CGG | 0.721412 | 5.1:+3379463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAGTTATACAATAATA+AGG | + | chr5.1:3377398-3377417 | None:intergenic | 10.0% |
| !!! | GATTTTAATTATACTATTAT+TGG | - | chr5.1:3379336-3379355 | MS.gene024651:CDS | 10.0% |
| !!! | TAATTTTCTCTAATTATTAT+CGG | - | chr5.1:3378440-3378459 | MS.gene024651:intron | 10.0% |
| !!! | TTATGTTTTTATTTATTTAG+GGG | - | chr5.1:3378730-3378749 | MS.gene024651:intron | 10.0% |
| !!! | TTTGAATATTTATGTTTTTA+GGG | - | chr5.1:3375979-3375998 | MS.gene024651:CDS | 10.0% |
| !!! | TTTTAATCAAAAGTTTTTAA+GGG | - | chr5.1:3377458-3377477 | MS.gene024651:intron | 10.0% |
| !!! | TTTTGAATATTTATGTTTTT+AGG | - | chr5.1:3375978-3375997 | MS.gene024651:CDS | 10.0% |
| !! | AAAAAATTATGTATGCAAAT+TGG | - | chr5.1:3378875-3378894 | MS.gene024651:intron | 15.0% |
| !! | AGTGATATACATATAAAATA+AGG | + | chr5.1:3377868-3377887 | None:intergenic | 15.0% |
| !! | TAATTGTTGAATGAATAAAT+AGG | - | chr5.1:3378541-3378560 | MS.gene024651:intron | 15.0% |
| !! | TAGATATTAAAAAAATTTGC+AGG | + | chr5.1:3376440-3376459 | None:intergenic | 15.0% |
| !!! | ACATTTTCAATTTAAAAACT+TGG | - | chr5.1:3376476-3376495 | MS.gene024651:intron | 15.0% |
| !!! | ACTTTTGATTAAAAGTTTTT+TGG | + | chr5.1:3377452-3377471 | None:intergenic | 15.0% |
| !!! | CTTTTAATCAAAAGTTTTTA+AGG | - | chr5.1:3377457-3377476 | MS.gene024651:intron | 15.0% |
| !!! | TATTCATGTATTCAAAATTT+TGG | + | chr5.1:3379104-3379123 | None:intergenic | 15.0% |
| !!! | TGAATTTGTTTTATATTTGT+AGG | - | chr5.1:3376026-3376045 | MS.gene024651:CDS | 15.0% |
| !!! | TGATTTTTGTAAGTTTTATT+TGG | - | chr5.1:3376213-3376232 | MS.gene024651:intron | 15.0% |
| !!! | TGCAAATTTTTTTAATATCT+AGG | - | chr5.1:3376439-3376458 | MS.gene024651:intron | 15.0% |
| !!! | TTATTGTCATTTTATGAATA+CGG | - | chr5.1:3378909-3378928 | MS.gene024651:intron | 15.0% |
| !! | AGATGAAATTAACATACAAT+TGG | + | chr5.1:3379128-3379147 | None:intergenic | 20.0% |
| !! | ATATAAAATAAGGAGAACAA+TGG | + | chr5.1:3377858-3377877 | None:intergenic | 20.0% |
| !! | CAATGTCAATTATTAAAACA+AGG | + | chr5.1:3379171-3379190 | None:intergenic | 20.0% |
| !! | TGAAAAAAATAAGAAACATC+AGG | + | chr5.1:3377033-3377052 | None:intergenic | 20.0% |
| !! | TTAAATAAAAAACATGCAAG+CGG | + | chr5.1:3377353-3377372 | None:intergenic | 20.0% |
| !!! | AATATTGTGGTTTAGATTTT+CGG | - | chr5.1:3376960-3376979 | MS.gene024651:CDS | 20.0% |
| !!! | ACTGTATTTAATTTGTGAAA+AGG | - | chr5.1:3376852-3376871 | MS.gene024651:intron | 20.0% |
| !!! | ATGTTTCTTATTTTTTTCAG+AGG | - | chr5.1:3377034-3377053 | MS.gene024651:CDS | 20.0% |
| !!! | CTTAAGTTTAGTTATGATTT+TGG | - | chr5.1:3378768-3378787 | MS.gene024651:intron | 20.0% |
| !!! | CTTCATTCATTTAATTTTGT+TGG | - | chr5.1:3377241-3377260 | MS.gene024651:intron | 20.0% |
| !!! | TAAAATTCAAACCTGTATTT+TGG | + | chr5.1:3377197-3377216 | None:intergenic | 20.0% |
| !!! | TATTATCTGTTTTGTTCATA+AGG | + | chr5.1:3378166-3378185 | None:intergenic | 20.0% |
| !!! | TATTGTCATTTTATGAATAC+GGG | - | chr5.1:3378910-3378929 | MS.gene024651:intron | 20.0% |
| !!! | TGGATTAATTTTAAAACTGT+AGG | - | chr5.1:3378988-3379007 | MS.gene024651:intron | 20.0% |
| !!! | TGTTTTAATAATTGACATTG+TGG | - | chr5.1:3379171-3379190 | MS.gene024651:CDS | 20.0% |
| !!! | TTTTATTTATTTAGGGGTTT+TGG | - | chr5.1:3378736-3378755 | MS.gene024651:intron | 20.0% |
| !!! | TTTTTCTTTTGCAAATATTG+TGG | - | chr5.1:3376947-3376966 | MS.gene024651:intron | 20.0% |
| ! | AAAAATTATCTAGTCATCAG+AGG | + | chr5.1:3376889-3376908 | None:intergenic | 25.0% |
| ! | AAAAATTTGCAAGTCATCAA+AGG | + | chr5.1:3376686-3376705 | None:intergenic | 25.0% |
| ! | AAAATTTGCAGGAGTAAATA+TGG | + | chr5.1:3376429-3376448 | None:intergenic | 25.0% |
| ! | ATCAGATCATATAAACAAGT+TGG | + | chr5.1:3376824-3376843 | None:intergenic | 25.0% |
| ! | ATTATGTATGCAAATTGGTT+AGG | - | chr5.1:3378880-3378899 | MS.gene024651:intron | 25.0% |
| ! | ATTCAACAATTACAAAACCA+TGG | + | chr5.1:3378533-3378552 | None:intergenic | 25.0% |
| ! | ATTGATATTACTGTTTGCTT+TGG | - | chr5.1:3378083-3378102 | MS.gene024651:CDS | 25.0% |
| ! | ATTGCAATGAAGAACATTAA+TGG | + | chr5.1:3378593-3378612 | None:intergenic | 25.0% |
| ! | TATATCACTCTTAATATACC+TGG | - | chr5.1:3377879-3377898 | MS.gene024651:intron | 25.0% |
| ! | TCAGAACTACAATAATCTAA+TGG | + | chr5.1:3378816-3378835 | None:intergenic | 25.0% |
| ! | TGAAACTAGACAATCTTAAA+TGG | - | chr5.1:3379055-3379074 | MS.gene024651:intron | 25.0% |
| ! | TGAATATAGACTGAAATTAC+TGG | - | chr5.1:3377647-3377666 | MS.gene024651:intron | 25.0% |
| ! | TGTTAATGTACTTAAGAGTT+AGG | + | chr5.1:3377918-3377937 | None:intergenic | 25.0% |
| ! | TTCAAAAGAAATAGACAAAC+TGG | + | chr5.1:3377611-3377630 | None:intergenic | 25.0% |
| ! | TTGAATCAAATTAGTGAATC+TGG | + | chr5.1:3376131-3376150 | None:intergenic | 25.0% |
| ! | TTGCAATGAAGAACATTAAT+GGG | + | chr5.1:3378592-3378611 | None:intergenic | 25.0% |
| ! | TTGTGACAATATTTGCAAAA+GGG | - | chr5.1:3377744-3377763 | MS.gene024651:intron | 25.0% |
| !! | TGACTAGATAATTTTTGTGA+AGG | - | chr5.1:3376893-3376912 | MS.gene024651:intron | 25.0% |
| !!! | AGATAAGCTTTAGACAAATT+AGG | + | chr5.1:3375927-3375946 | None:intergenic | 25.0% |
| !!! | ATGTTTTTAGGGTTGTTTTT+GGG | - | chr5.1:3375990-3376009 | MS.gene024651:CDS | 25.0% |
| !!! | GATAAGCTTTAGACAAATTA+GGG | + | chr5.1:3375926-3375945 | None:intergenic | 25.0% |
| !!! | TATGTTTTTAGGGTTGTTTT+TGG | - | chr5.1:3375989-3376008 | MS.gene024651:CDS | 25.0% |
| !!! | TGTTTTAAGGAAATAGTAAC+TGG | + | chr5.1:3377513-3377532 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTCATAAGGAAAA+AGG | + | chr5.1:3378159-3378178 | None:intergenic | 25.0% |
| !!! | TTCACTTTTTTACATTGAGA+TGG | - | chr5.1:3378937-3378956 | MS.gene024651:intron | 25.0% |
| !!! | TTTTTTACATTGAGATGGTA+TGG | - | chr5.1:3378942-3378961 | MS.gene024651:intron | 25.0% |
| AACCAAAATTGAAATTCGTC+TGG | - | chr5.1:3378215-3378234 | MS.gene024651:intron | 30.0% | |
| AAGGAAAAAGGTAAGTTACT+TGG | + | chr5.1:3378147-3378166 | None:intergenic | 30.0% | |
| ACTTATGACAGACTATGAAA+TGG | + | chr5.1:3377302-3377321 | None:intergenic | 30.0% | |
| AGATCACAAATCAATGGAAT+TGG | + | chr5.1:3377586-3377605 | None:intergenic | 30.0% | |
| ATCACTCTTATCACACATAT+GGG | + | chr5.1:3377129-3377148 | None:intergenic | 30.0% | |
| CAAAAGCTGAAGCAATTAAT+TGG | - | chr5.1:3378238-3378257 | MS.gene024651:intron | 30.0% | |
| CAAATTAGGGTTCAATTGAA+TGG | + | chr5.1:3375913-3375932 | None:intergenic | 30.0% | |
| GAATCAGTTTAATTGCTGAA+GGG | - | chr5.1:3376278-3376297 | MS.gene024651:intron | 30.0% | |
| GTTGTGACAATATTTGCAAA+AGG | - | chr5.1:3377743-3377762 | MS.gene024651:intron | 30.0% | |
| TAGTGCTTTCAATTACAGAA+TGG | - | chr5.1:3378498-3378517 | MS.gene024651:intron | 30.0% | |
| TATTTACCAAAATGCAGATG+AGG | - | chr5.1:3379262-3379281 | MS.gene024651:intron | 30.0% | |
| TGAATCAGTTTAATTGCTGA+AGG | - | chr5.1:3376277-3376296 | MS.gene024651:intron | 30.0% | |
| TGGTTAAAACAGTACTCAAT+AGG | + | chr5.1:3379084-3379103 | None:intergenic | 30.0% | |
| TTCAGTGTAATCATAACTGT+CGG | + | chr5.1:3378413-3378432 | None:intergenic | 30.0% | |
| TTCCTTAAAACAAACATGCT+TGG | - | chr5.1:3377521-3377540 | MS.gene024651:CDS | 30.0% | |
| ! | AAAATTAATCCACTTGTTGC+TGG | + | chr5.1:3378980-3378999 | None:intergenic | 30.0% |
| ! | ACTGGAGATAATTTGTGAAA+AGG | - | chr5.1:3376649-3376668 | MS.gene024651:intron | 30.0% |
| ! | TTAGGAAGTTTTCAATATCC+AGG | + | chr5.1:3377900-3377919 | None:intergenic | 30.0% |
| !! | CTGCATTTTGGTAAATATCA+CGG | + | chr5.1:3379259-3379278 | None:intergenic | 30.0% |
| !! | GTTTTGAGTAAGCTTACTTT+GGG | - | chr5.1:3377425-3377444 | MS.gene024651:intron | 30.0% |
| !! | TATTTATTTAGGGGTTTTGG+AGG | - | chr5.1:3378739-3378758 | MS.gene024651:intron | 30.0% |
| !! | TGTTTTGAGTAAGCTTACTT+TGG | - | chr5.1:3377424-3377443 | MS.gene024651:intron | 30.0% |
| !! | TTTTGAGTAAGCTTACTTTG+GGG | - | chr5.1:3377426-3377445 | MS.gene024651:intron | 30.0% |
| !!! | ATTTATTTAGGGGTTTTGGA+GGG | - | chr5.1:3378740-3378759 | MS.gene024651:intron | 30.0% |
| !!! | GTTTATGCGATTGGTTTTTA+GGG | - | chr5.1:3376625-3376644 | MS.gene024651:CDS | 30.0% |
| !!! | TGTTTATGCGATTGGTTTTT+AGG | - | chr5.1:3376624-3376643 | MS.gene024651:CDS | 30.0% |
| AAAGTCAAGGACTAAGGATT+GGG | - | chr5.1:3378658-3378677 | MS.gene024651:intron | 35.0% | |
| AATTACCAACCTCGATTGTT+TGG | - | chr5.1:3377983-3378002 | MS.gene024651:intron | 35.0% | |
| ACACCTTGAAATTTACTCGT+TGG | - | chr5.1:3376531-3376550 | MS.gene024651:intron | 35.0% | |
| AGCAATTAATTGGACATCTC+TGG | - | chr5.1:3378248-3378267 | MS.gene024651:intron | 35.0% | |
| AGTCCAACGAGTAAATTTCA+AGG | + | chr5.1:3376537-3376556 | None:intergenic | 35.0% | |
| ATGTATGCAAATTGGTTAGG+TGG | - | chr5.1:3378883-3378902 | MS.gene024651:intron | 35.0% | |
| CATCACTCTTATCACACATA+TGG | + | chr5.1:3377130-3377149 | None:intergenic | 35.0% | |
| CTAAAGCTTATCTTCGCAAA+GGG | - | chr5.1:3375934-3375953 | MS.gene024651:intron | 35.0% | |
| CTAAGATTGCACTTGAAAAG+GGG | - | chr5.1:3376083-3376102 | MS.gene024651:intron | 35.0% | |
| CTGGAAAGATCACAAATCAA+TGG | + | chr5.1:3377592-3377611 | None:intergenic | 35.0% | |
| CTGTAGGACATTGTTAAATG+TGG | - | chr5.1:3379004-3379023 | MS.gene024651:intron | 35.0% | |
| GAAAATGTTGTTGTGGACTT+TGG | - | chr5.1:3377776-3377795 | MS.gene024651:intron | 35.0% | |
| GAAGAAATAGCAGCAAAAAC+AGG | + | chr5.1:3377225-3377244 | None:intergenic | 35.0% | |
| GAATGAGTAGTGATGAAACT+AGG | - | chr5.1:3376577-3376596 | MS.gene024651:CDS | 35.0% | |
| GAGAAAGAAGAAAAGCTTGA+TGG | - | chr5.1:3379209-3379228 | MS.gene024651:intron | 35.0% | |
| GAGAGACGAAAGTTGTATTT+AGG | - | chr5.1:3379032-3379051 | MS.gene024651:intron | 35.0% | |
| GATATAAGATTGTGCTCGAT+CGG | + | chr5.1:3375847-3375866 | None:intergenic | 35.0% | |
| GCTAAGATTGCACTTGAAAA+GGG | - | chr5.1:3376082-3376101 | MS.gene024651:intron | 35.0% | |
| GTAATCATAACTGTCGGTAT+CGG | + | chr5.1:3378407-3378426 | None:intergenic | 35.0% | |
| GTATGTTAATGTGTTGTGAC+TGG | - | chr5.1:3376240-3376259 | MS.gene024651:intron | 35.0% | |
| TAAGATTGCACTTGAAAAGG+GGG | - | chr5.1:3376084-3376103 | MS.gene024651:intron | 35.0% | |
| TCAACTGATTGGAAAGAAGT+GGG | - | chr5.1:3379463-3379482 | MS.gene024651:CDS | 35.0% | |
| TCAATAAAACCCTGAAAACC+TGG | + | chr5.1:3376394-3376413 | None:intergenic | 35.0% | |
| TCTGTTAGATGACATGTTTC+AGG | - | chr5.1:3377322-3377341 | MS.gene024651:intron | 35.0% | |
| TGCTAAGATTGCACTTGAAA+AGG | - | chr5.1:3376081-3376100 | MS.gene024651:intron | 35.0% | |
| TGCTTACTTGTTTATGCGAT+TGG | - | chr5.1:3376616-3376635 | MS.gene024651:CDS | 35.0% | |
| TGTATGCAAATTGGTTAGGT+GGG | - | chr5.1:3378884-3378903 | MS.gene024651:intron | 35.0% | |
| TTAGTCCTTGACTTTGATGA+CGG | + | chr5.1:3378653-3378672 | None:intergenic | 35.0% | |
| TTCAACTGATTGGAAAGAAG+TGG | - | chr5.1:3379462-3379481 | MS.gene024651:CDS | 35.0% | |
| TTCAGGTGAGTTCATTACTT+GGG | - | chr5.1:3378311-3378330 | MS.gene024651:intron | 35.0% | |
| TTGCGGTATCAATCTATGAA+GGG | - | chr5.1:3378345-3378364 | MS.gene024651:intron | 35.0% | |
| TTGGAAACACAAACAGTAAC+TGG | - | chr5.1:3378102-3378121 | MS.gene024651:CDS | 35.0% | |
| TTTGCGGTATCAATCTATGA+AGG | - | chr5.1:3378344-3378363 | MS.gene024651:intron | 35.0% | |
| ! | AGTCTAATGAGCGAATTTTG+AGG | + | chr5.1:3376768-3376787 | None:intergenic | 35.0% |
| ! | CTTTTCTTCTTTCTCCTGAA+AGG | + | chr5.1:3379204-3379223 | None:intergenic | 35.0% |
| ! | GGAGCTTTTATGAAATCATG+TGG | + | chr5.1:3378795-3378814 | None:intergenic | 35.0% |
| ! | TCTAAAGCTTATCTTCGCAA+AGG | - | chr5.1:3375933-3375952 | MS.gene024651:intron | 35.0% |
| ! | TGCATTTGTTTGGGATTCTT+TGG | + | chr5.1:3377159-3377178 | None:intergenic | 35.0% |
| ! | TGCCAGACGAATTTCAATTT+TGG | + | chr5.1:3378220-3378239 | None:intergenic | 35.0% |
| ! | TTAGTGAATCTGGAATCATC+AGG | + | chr5.1:3376121-3376140 | None:intergenic | 35.0% |
| ! | TTGCAGTTTCGAGGTTTTTA+GGG | - | chr5.1:3376354-3376373 | MS.gene024651:intron | 35.0% |
| !! | AAATTACTGGCTCAATGTTC+TGG | - | chr5.1:3377660-3377679 | MS.gene024651:intron | 35.0% |
| !! | AAGTTTTTAAGGGAGACTGA+AGG | - | chr5.1:3377468-3377487 | MS.gene024651:CDS | 35.0% |
| !! | AGCTGTTTCTGATGCTAATA+AGG | - | chr5.1:3375887-3375906 | MS.gene024651:intron | 35.0% |
| !! | AGTTTTTAAGGGAGACTGAA+GGG | - | chr5.1:3377469-3377488 | MS.gene024651:CDS | 35.0% |
| !! | TGAAGGCACGATTATCTTTT+GGG | + | chr5.1:3378295-3378314 | None:intergenic | 35.0% |
| !! | TTGATTGATGATGTTTGAGC+AGG | - | chr5.1:3377690-3377709 | MS.gene024651:intron | 35.0% |
| !!! | AGCCAAGCATGTTTGTTTTA+AGG | + | chr5.1:3377526-3377545 | None:intergenic | 35.0% |
| !!! | CTTGGGTAGTTTTTAGTTTG+CGG | - | chr5.1:3378328-3378347 | MS.gene024651:intron | 35.0% |
| AAAATGCAGATGAGGACATG+AGG | - | chr5.1:3379270-3379289 | MS.gene024651:intron | 40.0% | |
| ACCACAACTTTGCACTTATC+AGG | + | chr5.1:3378189-3378208 | None:intergenic | 40.0% | |
| ACCAGCAGAAAATGTTGTTG+TGG | - | chr5.1:3377769-3377788 | MS.gene024651:intron | 40.0% | |
| ACCTGATAAGTGCAAAGTTG+TGG | - | chr5.1:3378185-3378204 | MS.gene024651:CDS | 40.0% | |
| AGTGTTACCATTGATGTTCC+TGG | - | chr5.1:3377947-3377966 | MS.gene024651:intron | 40.0% | |
| ATTGTCACAACCACTTCTTC+TGG | + | chr5.1:3377734-3377753 | None:intergenic | 40.0% | |
| CAAAAGATAATCGTGCCTTC+AGG | - | chr5.1:3378294-3378313 | MS.gene024651:intron | 40.0% | |
| CAAAGTCAAGGACTAAGGAT+TGG | - | chr5.1:3378657-3378676 | MS.gene024651:intron | 40.0% | |
| CAAGTAATGAACTCACCTGA+AGG | + | chr5.1:3378312-3378331 | None:intergenic | 40.0% | |
| CATATCCGTCATCAAAGTCA+AGG | - | chr5.1:3378645-3378664 | MS.gene024651:intron | 40.0% | |
| CATGCTTGGCTACAATTTGT+TGG | - | chr5.1:3377535-3377554 | MS.gene024651:CDS | 40.0% | |
| CTTCAGGTGAGTTCATTACT+TGG | - | chr5.1:3378310-3378329 | MS.gene024651:intron | 40.0% | |
| GAAAGAAGTGGGATCAAAGA+AGG | - | chr5.1:3379474-3379493 | MS.gene024651:CDS | 40.0% | |
| GAACAGTGCTTTCAACTGAT+TGG | - | chr5.1:3379452-3379471 | MS.gene024651:CDS | 40.0% | |
| GACTAAGGATTGGGATAAGT+TGG | - | chr5.1:3378667-3378686 | MS.gene024651:intron | 40.0% | |
| GGAAGCTGAAGTGAAAAAAG+AGG | - | chr5.1:3378688-3378707 | MS.gene024651:intron | 40.0% | |
| GGGGGAAAATCAAATAGCAT+CGG | + | chr5.1:3377824-3377843 | None:intergenic | 40.0% | |
| GTCATCAAAGTCAAGGACTA+AGG | - | chr5.1:3378652-3378671 | MS.gene024651:intron | 40.0% | |
| GTTACCTTTCCAAACAATCG+AGG | + | chr5.1:3377995-3378014 | None:intergenic | 40.0% | |
| TGCGGTATCAATCTATGAAG+GGG | - | chr5.1:3378346-3378365 | MS.gene024651:intron | 40.0% | |
| TGGTGCAACTGCATTTGTTT+GGG | + | chr5.1:3377168-3377187 | None:intergenic | 40.0% | |
| TTCGCTACTGTGTTTGCAAA+CGG | - | chr5.1:3378032-3378051 | MS.gene024651:intron | 40.0% | |
| TTTCCGCAGTTCAATCTGAA+AGG | - | chr5.1:3378618-3378637 | MS.gene024651:intron | 40.0% | |
| ! | ATTTGGGTTCATTTGGTGGT+AGG | + | chr5.1:3377082-3377101 | None:intergenic | 40.0% |
| ! | GATGATTTGGGTTCATTTGG+TGG | + | chr5.1:3377086-3377105 | None:intergenic | 40.0% |
| ! | GCAGATGATTTGGGTTCATT+TGG | + | chr5.1:3377089-3377108 | None:intergenic | 40.0% |
| ! | GTTGCAGTTTCGAGGTTTTT+AGG | - | chr5.1:3376353-3376372 | MS.gene024651:intron | 40.0% |
| ! | TCATGTCCTCATCTGCATTT+TGG | + | chr5.1:3379271-3379290 | None:intergenic | 40.0% |
| ! | TCCACAACAACATTTTCTGC+TGG | + | chr5.1:3377773-3377792 | None:intergenic | 40.0% |
| ! | TTGTGACTGGTCAGTGAAAT+TGG | - | chr5.1:3376253-3376272 | MS.gene024651:intron | 40.0% |
| ! | TTTGGGTTCATTTGGTGGTA+GGG | + | chr5.1:3377081-3377100 | None:intergenic | 40.0% |
| !! | CAATCGAGGTTGGTAATTGT+AGG | + | chr5.1:3377981-3378000 | None:intergenic | 40.0% |
| !! | CTGAAGGCACGATTATCTTT+TGG | + | chr5.1:3378296-3378315 | None:intergenic | 40.0% |
| !! | GAAGGCACGATTATCTTTTG+GGG | + | chr5.1:3378294-3378313 | None:intergenic | 40.0% |
| !! | GACATCTCTGGAATATAGCA+AGG | - | chr5.1:3378260-3378279 | MS.gene024651:intron | 40.0% |
| !! | TGAAAGCACTAACACAGACA+CGG | + | chr5.1:3378489-3378508 | None:intergenic | 40.0% |
| !! | TTGGCTACAATTTGTTGGTG+TGG | - | chr5.1:3377540-3377559 | MS.gene024651:CDS | 40.0% |
| !!! | AACCTGTATTTTGGTCTGAC+TGG | + | chr5.1:3377188-3377207 | None:intergenic | 40.0% |
| !!! | AGGTTTTTAGGGTTTCAGTC+TGG | - | chr5.1:3376365-3376384 | MS.gene024651:intron | 40.0% |
| AACAATGGAGAGCAGGTAAG+GGG | + | chr5.1:3377843-3377862 | None:intergenic | 45.0% | |
| AACAGACGCAGCAGATGATT+TGG | + | chr5.1:3377099-3377118 | None:intergenic | 45.0% | |
| AAGGCATGGAGGTGAAGAAA+TGG | - | chr5.1:3379515-3379534 | MS.gene024651:CDS | 45.0% | |
| ACAGACGCAGCAGATGATTT+GGG | + | chr5.1:3377098-3377117 | None:intergenic | 45.0% | |
| ACATTGCAGCTGGAGTCAAA+TGG | - | chr5.1:3379430-3379449 | MS.gene024651:CDS | 45.0% | |
| ACTAACACAGACACGGACAT+TGG | + | chr5.1:3378482-3378501 | None:intergenic | 45.0% | |
| AGAACAATGGAGAGCAGGTA+AGG | + | chr5.1:3377845-3377864 | None:intergenic | 45.0% | |
| AGAAGTGGGATCAAAGAAGG+TGG | - | chr5.1:3379477-3379496 | MS.gene024651:CDS | 45.0% | |
| AGGCATGGAGGTGAAGAAAT+GGG | - | chr5.1:3379516-3379535 | MS.gene024651:CDS | 45.0% | |
| AGGCCTTTCAGATTGAACTG+CGG | + | chr5.1:3378624-3378643 | None:intergenic | 45.0% | |
| AGGGAGACTGAAGGGAAAAA+AGG | - | chr5.1:3377477-3377496 | MS.gene024651:CDS | 45.0% | |
| CACCAGTCAGACCAAAATAC+AGG | - | chr5.1:3377183-3377202 | MS.gene024651:intron | 45.0% | |
| CCAACCTCGATTGTTTGGAA+AGG | - | chr5.1:3377988-3378007 | MS.gene024651:intron | 45.0% | |
| CCTTTCCAAACAATCGAGGT+TGG | + | chr5.1:3377991-3378010 | None:intergenic | 45.0% | |
| CTGGTGCAACTGCATTTGTT+TGG | + | chr5.1:3377169-3377188 | None:intergenic | 45.0% | |
| GAACAATGGAGAGCAGGTAA+GGG | + | chr5.1:3377844-3377863 | None:intergenic | 45.0% | |
| GATTCATTGCCAGCAACAAG+TGG | - | chr5.1:3378968-3378987 | MS.gene024651:intron | 45.0% | |
| GGCTTGGGAGTAGAAATCAA+CGG | + | chr5.1:3375790-3375809 | None:intergenic | 45.0% | |
| GGGAGACTGAAGGGAAAAAA+GGG | - | chr5.1:3377478-3377497 | MS.gene024651:CDS | 45.0% | |
| GTGTTGTAGTTGCAGTTTCG+AGG | - | chr5.1:3376345-3376364 | MS.gene024651:intron | 45.0% | |
| TAAGGAGAACAATGGAGAGC+AGG | + | chr5.1:3377850-3377869 | None:intergenic | 45.0% | |
| TTACCAGAAGCCAGAAGAAG+TGG | - | chr5.1:3377721-3377740 | MS.gene024651:intron | 45.0% | |
| ! | ATAACTGTCGGTATCGGACA+CGG | + | chr5.1:3378401-3378420 | None:intergenic | 45.0% |
| !! | GACTTTGATGACGGATATGC+AGG | + | chr5.1:3378644-3378663 | None:intergenic | 45.0% |
| !! | GTTGGTAATTGTAGGCGTCT+TGG | + | chr5.1:3377973-3377992 | None:intergenic | 45.0% |
| !!! | CAGAATGGTTGCTTTTGCCA+TGG | - | chr5.1:3378513-3378532 | MS.gene024651:intron | 45.0% |
| !! | AAATAAATAAAAACATAAAT+AGG | + | chr5.1:3378728-3378747 | None:intergenic | 5.0% |
| !! | AATAAATAAAAACATAAATA+GGG | + | chr5.1:3378727-3378746 | None:intergenic | 5.0% |
| !!! | ATTTATGTTTTTATTTATTT+AGG | - | chr5.1:3378728-3378747 | MS.gene024651:intron | 5.0% |
| !!! | TTTATGTTTTTATTTATTTA+GGG | - | chr5.1:3378729-3378748 | MS.gene024651:intron | 5.0% |
| !!! | TTTTTGTTTTATTTAAATTT+AGG | - | chr5.1:3376323-3376342 | MS.gene024651:intron | 5.0% |
| ACAATGGAGAGCAGGTAAGG+GGG | + | chr5.1:3377842-3377861 | None:intergenic | 50.0% | |
| ATCAGGCTCGCATATCATGC+AGG | + | chr5.1:3377016-3377035 | None:intergenic | 50.0% | |
| ATCTATGAAGGGGACACTCC+CGG | - | chr5.1:3378356-3378375 | MS.gene024651:intron | 50.0% | |
| ATTGTGGTGCTCTGCCTTTC+AGG | - | chr5.1:3379187-3379206 | MS.gene024651:CDS | 50.0% | |
| CTGCAATGTCACGCAGTTCA+AGG | + | chr5.1:3379419-3379438 | None:intergenic | 50.0% | |
| GTCTTGGCCAGGAACATCAA+TGG | + | chr5.1:3377957-3377976 | None:intergenic | 50.0% | |
| GTGGGATCAAAGAAGGTGGA+AGG | - | chr5.1:3379481-3379500 | MS.gene024651:CDS | 50.0% | |
| TAATTGTAGGCGTCTTGGCC+AGG | + | chr5.1:3377968-3377987 | None:intergenic | 50.0% | |
| TGTCAACGCTTCATTGCTGC+TGG | - | chr5.1:3376154-3376173 | MS.gene024651:intron | 50.0% | |
| TTCTTCACCTCCATGCCTTC+CGG | + | chr5.1:3379514-3379533 | None:intergenic | 50.0% | |
| ! | GGGATCGATTTCGATGGCTT+GGG | + | chr5.1:3375805-3375824 | None:intergenic | 50.0% |
| ! | GTTGGTGGGATCGATTTCGA+TGG | + | chr5.1:3375811-3375830 | None:intergenic | 50.0% |
| ! | TGGGATCGATTTCGATGGCT+TGG | + | chr5.1:3375806-3375825 | None:intergenic | 50.0% |
| !! | CAACCACTTCTTCTGGCTTC+TGG | + | chr5.1:3377727-3377746 | None:intergenic | 50.0% |
| !!! | GCGATTGGTTTTTAGGGCAC+TGG | - | chr5.1:3376631-3376650 | MS.gene024651:intron | 50.0% |
| ACACCGGGACACACCTAATC+CGG | + | chr5.1:3378378-3378397 | None:intergenic | 55.0% | |
| ATCGGCGAAGAGATTGGCGT+TGG | + | chr5.1:3375829-3375848 | None:intergenic | 55.0% | |
| GAACTGCGTGACATTGCAGC+TGG | - | chr5.1:3379420-3379439 | MS.gene024651:CDS | 55.0% | |
| GAAGGTGGAAGGAAGTCCTC+CGG | - | chr5.1:3379492-3379511 | MS.gene024651:CDS | 55.0% | |
| TGCTCGATCGGCGAAGAGAT+TGG | + | chr5.1:3375835-3375854 | None:intergenic | 55.0% | |
| ! | AGTCTGGCGTCCAGGTTTTC+AGG | - | chr5.1:3376381-3376400 | MS.gene024651:intron | 55.0% |
| ! | GTCTGGCGTCCAGGTTTTCA+GGG | - | chr5.1:3376382-3376401 | MS.gene024651:intron | 55.0% |
| ! | TTGGTGGTAGGGTGCTCGTA+AGG | + | chr5.1:3377070-3377089 | None:intergenic | 55.0% |
| !! | GCGAAGAGATTGGCGTTGGT+GGG | + | chr5.1:3375825-3375844 | None:intergenic | 55.0% |
| AGGAAGTCCTCCGGAAGGCA+TGG | - | chr5.1:3379501-3379520 | MS.gene024651:CDS | 60.0% | |
| AGGGTTTCAGTCTGGCGTCC+AGG | - | chr5.1:3376373-3376392 | MS.gene024651:intron | 60.0% | |
| CACCGGGACACACCTAATCC+GGG | + | chr5.1:3378377-3378396 | None:intergenic | 60.0% | |
| GAAGGGGACACTCCCGGATT+AGG | - | chr5.1:3378362-3378381 | MS.gene024651:intron | 60.0% | |
| GTGGAAGGAAGTCCTCCGGA+AGG | - | chr5.1:3379496-3379515 | MS.gene024651:CDS | 60.0% | |
| TTCACCTCCATGCCTTCCGG+AGG | + | chr5.1:3379511-3379530 | None:intergenic | 60.0% | |
| ! | AAGTCCTCCGGAAGGCATGG+AGG | - | chr5.1:3379504-3379523 | MS.gene024651:CDS | 60.0% |
| ! | CTCCCGGATTAGGTGTGTCC+CGG | - | chr5.1:3378372-3378391 | MS.gene024651:intron | 60.0% |
| ! | GGCGAAGAGATTGGCGTTGG+TGG | + | chr5.1:3375826-3375845 | None:intergenic | 60.0% |
| ! | TCGGTATCGGACACGGACAC+CGG | + | chr5.1:3378394-3378413 | None:intergenic | 60.0% |
| ! | CGGTATCGGACACGGACACC+GGG | + | chr5.1:3378393-3378412 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 3375726 | 3379546 | 3375726 | ID=MS.gene024651 |
| chr5.1 | mRNA | 3375726 | 3379546 | 3375726 | ID=MS.gene024651.t1;Parent=MS.gene024651 |
| chr5.1 | exon | 3379317 | 3379546 | 3379317 | ID=MS.gene024651.t1.exon1;Parent=MS.gene024651.t1 |
| chr5.1 | CDS | 3379317 | 3379546 | 3379317 | ID=cds.MS.gene024651.t1;Parent=MS.gene024651.t1 |
| chr5.1 | exon | 3379097 | 3379224 | 3379097 | ID=MS.gene024651.t1.exon2;Parent=MS.gene024651.t1 |
| chr5.1 | CDS | 3379097 | 3379224 | 3379097 | ID=cds.MS.gene024651.t1;Parent=MS.gene024651.t1 |
| chr5.1 | exon | 3378068 | 3378218 | 3378068 | ID=MS.gene024651.t1.exon3;Parent=MS.gene024651.t1 |
| chr5.1 | CDS | 3378068 | 3378218 | 3378068 | ID=cds.MS.gene024651.t1;Parent=MS.gene024651.t1 |
| chr5.1 | exon | 3377464 | 3377560 | 3377464 | ID=MS.gene024651.t1.exon4;Parent=MS.gene024651.t1 |
| chr5.1 | CDS | 3377464 | 3377560 | 3377464 | ID=cds.MS.gene024651.t1;Parent=MS.gene024651.t1 |
| chr5.1 | exon | 3377263 | 3377328 | 3377263 | ID=MS.gene024651.t1.exon5;Parent=MS.gene024651.t1 |
| chr5.1 | CDS | 3377263 | 3377328 | 3377263 | ID=cds.MS.gene024651.t1;Parent=MS.gene024651.t1 |
| chr5.1 | exon | 3376957 | 3377092 | 3376957 | ID=MS.gene024651.t1.exon6;Parent=MS.gene024651.t1 |
| chr5.1 | CDS | 3376957 | 3377092 | 3376957 | ID=cds.MS.gene024651.t1;Parent=MS.gene024651.t1 |
| chr5.1 | exon | 3376563 | 3376645 | 3376563 | ID=MS.gene024651.t1.exon7;Parent=MS.gene024651.t1 |
| chr5.1 | CDS | 3376563 | 3376645 | 3376563 | ID=cds.MS.gene024651.t1;Parent=MS.gene024651.t1 |
| chr5.1 | exon | 3375959 | 3376063 | 3375959 | ID=MS.gene024651.t1.exon8;Parent=MS.gene024651.t1 |
| chr5.1 | CDS | 3375959 | 3376063 | 3375959 | ID=cds.MS.gene024651.t1;Parent=MS.gene024651.t1 |
| chr5.1 | exon | 3375726 | 3375833 | 3375726 | ID=MS.gene024651.t1.exon9;Parent=MS.gene024651.t1 |
| chr5.1 | CDS | 3375726 | 3375833 | 3375726 | ID=cds.MS.gene024651.t1;Parent=MS.gene024651.t1 |
| Gene Sequence |
| Protein sequence |
