Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83993.t1 | XP_013452348.1 | 88 | 357 | 43 | 0 | 1 | 357 | 1 | 357 | 1.20E-166 | 595.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83993.t1 | Q0JL44 | 57.9 | 363 | 145 | 4 | 2 | 357 | 6 | 367 | 2.2e-103 | 377.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83993.t1 | A0A072UAF1 | 88.0 | 357 | 43 | 0 | 1 | 357 | 1 | 357 | 9.0e-167 | 595.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22341 | MS.gene83993 | PPI |
| MS.gene024651 | MS.gene83993 | PPI |
| MS.gene21632 | MS.gene83993 | PPI |
| MS.gene072762 | MS.gene83993 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83993.t1 | MTR_6g053290 | 97.199 | 357 | 10 | 0 | 1 | 357 | 1 | 357 | 0.0 | 711 |
| MS.gene83993.t1 | MTR_6g053290 | 92.533 | 375 | 10 | 1 | 1 | 357 | 1 | 375 | 0.0 | 699 |
| MS.gene83993.t1 | MTR_5g009930 | 62.933 | 375 | 120 | 5 | 1 | 357 | 1 | 374 | 2.41e-156 | 444 |
| MS.gene83993.t1 | MTR_5g009930 | 58.361 | 305 | 108 | 5 | 1 | 287 | 1 | 304 | 1.10e-116 | 341 |
| MS.gene83993.t1 | MTR_6g060735 | 58.947 | 95 | 28 | 2 | 196 | 287 | 59 | 145 | 2.52e-26 | 103 |
| MS.gene83993.t1 | MTR_6g060740 | 64.935 | 77 | 19 | 1 | 211 | 287 | 4 | 72 | 3.63e-25 | 97.8 |
| MS.gene83993.t1 | MTR_3g452710 | 34.228 | 149 | 91 | 2 | 2 | 143 | 11 | 159 | 6.47e-16 | 79.0 |
| MS.gene83993.t1 | MTR_3g452710 | 34.848 | 132 | 82 | 1 | 2 | 129 | 11 | 142 | 6.36e-15 | 76.3 |
| MS.gene83993.t1 | MTR_5g012030 | 37.500 | 96 | 60 | 0 | 1 | 96 | 1 | 96 | 6.43e-13 | 70.1 |
| MS.gene83993.t1 | MTR_5g012030 | 26.846 | 149 | 94 | 1 | 8 | 156 | 398 | 531 | 1.36e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83993.t1 | AT4G11260 | 64.345 | 359 | 125 | 2 | 1 | 357 | 1 | 358 | 5.04e-160 | 452 |
| MS.gene83993.t1 | AT4G23570 | 66.573 | 356 | 112 | 4 | 1 | 356 | 1 | 349 | 1.07e-155 | 441 |
| MS.gene83993.t1 | AT4G23570 | 66.573 | 356 | 112 | 4 | 1 | 356 | 1 | 349 | 1.07e-155 | 441 |
| MS.gene83993.t1 | AT4G23570 | 66.387 | 357 | 112 | 5 | 1 | 356 | 1 | 350 | 1.00e-153 | 436 |
| MS.gene83993.t1 | AT2G42810 | 29.530 | 149 | 98 | 2 | 2 | 143 | 13 | 161 | 5.82e-13 | 70.1 |
| MS.gene83993.t1 | AT2G42810 | 29.530 | 149 | 98 | 2 | 2 | 143 | 13 | 161 | 5.82e-13 | 70.1 |
| MS.gene83993.t1 | AT2G42810 | 29.530 | 149 | 98 | 2 | 2 | 143 | 13 | 161 | 5.82e-13 | 70.1 |
| MS.gene83993.t1 | AT2G42810 | 30.370 | 135 | 90 | 1 | 2 | 132 | 13 | 147 | 6.00e-13 | 70.1 |
| MS.gene83993.t1 | AT2G42810 | 30.370 | 135 | 90 | 1 | 2 | 132 | 13 | 147 | 6.33e-13 | 70.1 |
| MS.gene83993.t1 | AT4G22670 | 40.000 | 95 | 57 | 0 | 8 | 102 | 129 | 223 | 6.52e-12 | 67.0 |
| MS.gene83993.t1 | AT1G04190 | 40.000 | 90 | 54 | 0 | 5 | 94 | 18 | 107 | 6.68e-12 | 66.2 |
| MS.gene83993.t1 | AT1G62740 | 35.417 | 96 | 62 | 0 | 1 | 96 | 1 | 96 | 1.03e-11 | 66.6 |
Find 78 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCACTTCTTCAGGTTTC+TGG | 0.138730 | 6.1:-30575455 | None:intergenic |
| AGCAAGACGAATTTCAATTT+TGG | 0.199172 | 6.1:-30575945 | None:intergenic |
| TGGTCTCTTTGTTGAATTCT+AGG | 0.213353 | 6.1:-30575994 | None:intergenic |
| ATCTTCAACAAAGGCTTCTT+TGG | 0.216364 | 6.1:-30572044 | None:intergenic |
| GCACGATCAGCGTAGAATTC+AGG | 0.293401 | 6.1:-30572124 | None:intergenic |
| TGAAGTGGTTGAGTTTGATA+TGG | 0.328758 | 6.1:-30572153 | None:intergenic |
| GCACCTAAGGCTATTGCTTC+AGG | 0.337779 | 6.1:+30576022 | MS.gene83993:CDS |
| ATGGTTACAACCACTTCTTC+AGG | 0.346348 | 6.1:-30575462 | None:intergenic |
| GGCTCCTCTGAAAGATCTTC+TGG | 0.364330 | 6.1:-30575016 | None:intergenic |
| TTTAGAGACGGGTGCCTCAT+TGG | 0.365204 | 6.1:+30574678 | MS.gene83993:CDS |
| TTCTTCAACTCCATGCCATC+TGG | 0.365330 | 6.1:-30577149 | None:intergenic |
| AGCTGTACTAACCTATATTT+AGG | 0.377346 | 6.1:-30575058 | None:intergenic |
| GAATGTGACAAACGCATTGC+AGG | 0.417521 | 6.1:+30574736 | MS.gene83993:CDS |
| CAAGACTTCATACCGGCATC+TGG | 0.421417 | 6.1:-30575918 | None:intergenic |
| CAGCATCTTGATAAATTTCA+CGG | 0.430081 | 6.1:-30576608 | None:intergenic |
| GAAAGCATTACTGTTGACTT+TGG | 0.433046 | 6.1:+30575507 | MS.gene83993:CDS |
| CAAAGGCATATTTGCGCAAA+GGG | 0.436250 | 6.1:+30574063 | MS.gene83993:CDS |
| GAGAAAGATGAAAACCTTGA+TGG | 0.440195 | 6.1:+30576561 | MS.gene83993:CDS |
| GGTCTCTTTGTTGAATTCTA+GGG | 0.445923 | 6.1:-30575993 | None:intergenic |
| GCGTAGAATTCAGGTTTAAG+AGG | 0.446014 | 6.1:-30572115 | None:intergenic |
| ATGGCATGGAGTTGAAGAAA+TGG | 0.454175 | 6.1:+30577153 | MS.gene83993:CDS |
| GAACAGTGCTGTCTACAAAC+TGG | 0.455830 | 6.1:+30577090 | MS.gene83993:CDS |
| CTCAAAGTGATCTTCAACAA+AGG | 0.460457 | 6.1:-30572053 | None:intergenic |
| GTTGTAACCATATTTGCAAA+GGG | 0.471848 | 6.1:+30575474 | MS.gene83993:CDS |
| GAAGTGGTTGAGTTTGATAT+GGG | 0.493240 | 6.1:-30572152 | None:intergenic |
| TGTTGAAGATCACTTTGAGT+TGG | 0.493644 | 6.1:+30572057 | MS.gene83993:CDS |
| GGCTTAGCAACCACCACTAT+CGG | 0.497493 | 6.1:-30575037 | None:intergenic |
| ATCAAACTCAACCACTTCAC+TGG | 0.500406 | 6.1:+30572157 | MS.gene83993:CDS |
| TTACCTGAAGCAATAGCCTT+AGG | 0.508402 | 6.1:-30576025 | None:intergenic |
| CTAAAGCTGAATCTATTCAC+TGG | 0.510738 | 6.1:+30575966 | MS.gene83993:CDS |
| TCAAAATCGCTTGTTTGGAA+AGG | 0.513107 | 6.1:+30575713 | MS.gene83993:CDS |
| AAAACGTATGCATCTTCTCC+AGG | 0.513603 | 6.1:-30575690 | None:intergenic |
| TTTGGCTTTCACTTCAAGAT+CGG | 0.514555 | 6.1:-30572026 | None:intergenic |
| AGAGACCACAATTGCACCTA+AGG | 0.514993 | 6.1:+30576009 | MS.gene83993:CDS |
| GTCTACAAACTGGAAGGAAG+TGG | 0.515802 | 6.1:+30577100 | MS.gene83993:CDS |
| TTACCAGAAACCTGAAGAAG+TGG | 0.519527 | 6.1:+30575452 | MS.gene83993:CDS |
| TGAAGTTGGATCCTGTGTTG+TGG | 0.520693 | 6.1:-30574981 | None:intergenic |
| TTTAAGAGGGTCAAGAGTAA+TGG | 0.521953 | 6.1:-30572101 | None:intergenic |
| TGGCATGGAGTTGAAGAAAT+GGG | 0.527009 | 6.1:+30577154 | MS.gene83993:CDS |
| TCAGGGCAGCATCGCCATCA+AGG | 0.537014 | 6.1:-30576575 | None:intergenic |
| TCTTTCAGAGGAGCCGATAG+TGG | 0.537695 | 6.1:+30575024 | MS.gene83993:CDS |
| AGTGTCAACATTGATGTCCC+TGG | 0.537929 | 6.1:+30575672 | MS.gene83993:CDS |
| GTTGAATCCTTCTCTATCAA+AGG | 0.539634 | 6.1:+30574046 | MS.gene83993:CDS |
| TGAGGCTCAAGTTAAGAAAG+AGG | 0.544908 | 6.1:+30576460 | MS.gene83993:CDS |
| AGATCGTACCTTCCAGATGC+CGG | 0.546529 | 6.1:+30575906 | MS.gene83993:intron |
| GTGGGAACAAAGAAGGTGGA+AGG | 0.546534 | 6.1:+30577119 | MS.gene83993:CDS |
| GGAAGTGGGAACAAAGAAGG+TGG | 0.550429 | 6.1:+30577115 | MS.gene83993:CDS |
| AAATATGCCTTTGATAGAGA+AGG | 0.551968 | 6.1:-30574053 | None:intergenic |
| GCTAAGACTGCTTTAGAGAC+GGG | 0.554642 | 6.1:+30574667 | MS.gene83993:CDS |
| GAAGGAAGTGGGAACAAAGA+AGG | 0.558246 | 6.1:+30577112 | MS.gene83993:CDS |
| TGCTAAGACTGCTTTAGAGA+CGG | 0.559231 | 6.1:+30574666 | MS.gene83993:CDS |
| AGGAAGTCCTCCAGATGGCA+TGG | 0.561017 | 6.1:+30577139 | MS.gene83993:CDS |
| TGGTTGCTAAGCCTAAATAT+AGG | 0.562078 | 6.1:+30575047 | MS.gene83993:CDS |
| AATAGCCTTAGGTGCAATTG+TGG | 0.564985 | 6.1:-30576014 | None:intergenic |
| GGTTGTAACCATATTTGCAA+AGG | 0.570551 | 6.1:+30575473 | MS.gene83993:CDS |
| ATCTGATACCGTACCTACAC+AGG | 0.573629 | 6.1:+30574952 | MS.gene83993:CDS |
| TTCAACTCCATGCCATCTGG+AGG | 0.573646 | 6.1:-30577146 | None:intergenic |
| CGTAGAATTCAGGTTTAAGA+GGG | 0.577622 | 6.1:-30572114 | None:intergenic |
| TCAAAGGCATATTTGCGCAA+AGG | 0.585557 | 6.1:+30574062 | MS.gene83993:CDS |
| AAACTGACTCACCAGTGAAG+TGG | 0.588718 | 6.1:-30572168 | None:intergenic |
| CAATGCGTGCATGAAGCTTG+AGG | 0.590690 | 6.1:+30574633 | MS.gene83993:CDS |
| CGGGTAAGTGGGTCTTTGAG+TGG | 0.593553 | 6.1:-30576402 | None:intergenic |
| TGATTTGTCTGCAGCCAATG+AGG | 0.596085 | 6.1:-30574692 | None:intergenic |
| TGTAACCATATTTGCAAAGG+GGG | 0.599430 | 6.1:+30575476 | MS.gene83993:CDS |
| TGGTGGACAAGACTTCATAC+CGG | 0.608923 | 6.1:-30575925 | None:intergenic |
| ACTTCATACCGGCATCTGGA+AGG | 0.611309 | 6.1:-30575914 | None:intergenic |
| TGTTTGCAGGTGGAGTCGAA+TGG | 0.611791 | 6.1:+30577068 | MS.gene83993:intron |
| TTCAGAGGAGCCGATAGTGG+TGG | 0.617870 | 6.1:+30575027 | MS.gene83993:CDS |
| TCTACAAACTGGAAGGAAGT+GGG | 0.621778 | 6.1:+30577101 | MS.gene83993:CDS |
| AAACGTATGCATCTTCTCCA+GGG | 0.628412 | 6.1:-30575689 | None:intergenic |
| AATTTATCAAGATGCTGATG+AGG | 0.632409 | 6.1:+30576614 | MS.gene83993:CDS |
| AACAGATTGGGATAAGCTTG+AGG | 0.633465 | 6.1:+30576442 | MS.gene83993:CDS |
| TCAGCCAGAAGATCTTTCAG+AGG | 0.640486 | 6.1:+30575012 | MS.gene83993:CDS |
| AGTGCTGTCTACAAACTGGA+AGG | 0.650530 | 6.1:+30577094 | MS.gene83993:CDS |
| AAGCTGAATCTATTCACTGG+AGG | 0.652918 | 6.1:+30575969 | MS.gene83993:CDS |
| GTGGAAGGAAGTCCTCCAGA+TGG | 0.656890 | 6.1:+30577134 | MS.gene83993:CDS |
| ACAGGAAAAGTCCACAACAC+AGG | 0.661521 | 6.1:+30574970 | MS.gene83993:CDS |
| TTGTAACCATATTTGCAAAG+GGG | 0.699137 | 6.1:+30575475 | MS.gene83993:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAATAAAGGTAAAAT+AGG | - | chr6.1:30573293-30573312 | None:intergenic | 10.0% |
| !! | ATTAGAGTAAATTATAATAA+AGG | - | chr6.1:30573302-30573321 | None:intergenic | 10.0% |
| !! | TAAATAAGTTTAATATTAGT+CGG | + | chr6.1:30573401-30573420 | MS.gene83993:intron | 10.0% |
| !!! | AAAATTAAAGTTTGTTTAAT+TGG | + | chr6.1:30572818-30572837 | MS.gene83993:intron | 10.0% |
| !!! | AAACTAATTTAAATTGATTT+CGG | + | chr6.1:30574419-30574438 | MS.gene83993:intron | 10.0% |
| !!! | AAATTAAAGTTTGTTTAATT+GGG | + | chr6.1:30572819-30572838 | MS.gene83993:intron | 10.0% |
| !!! | AACATAATCTAAATATTTTA+AGG | + | chr6.1:30576776-30576795 | MS.gene83993:intron | 10.0% |
| !!! | CTTTTTATTATTTACTTTTT+TGG | + | chr6.1:30574786-30574805 | MS.gene83993:intron | 10.0% |
| !!! | TATACTAAAAAAATTTTGTA+TGG | + | chr6.1:30575811-30575830 | MS.gene83993:intron | 10.0% |
| !!! | TTATAATGATTTACTAATTT+TGG | + | chr6.1:30573965-30573984 | MS.gene83993:intron | 10.0% |
| !!! | TTTTCCAATTTATTTTTTTT+TGG | + | chr6.1:30574607-30574626 | MS.gene83993:intron | 10.0% |
| !! | ATTGATAAAAAACAAACAAA+AGG | - | chr6.1:30572241-30572260 | None:intergenic | 15.0% |
| !! | GAAAAACAAATTAAGAAATT+TGG | - | chr6.1:30574592-30574611 | None:intergenic | 15.0% |
| !! | TAAATAATGATGAACATTAA+GGG | - | chr6.1:30576328-30576347 | None:intergenic | 15.0% |
| !! | TGTTAATTTAGTATCTAATT+GGG | + | chr6.1:30575331-30575350 | MS.gene83993:intron | 15.0% |
| !! | TTAAGGACTAAAATAAAAAT+GGG | + | chr6.1:30576793-30576812 | MS.gene83993:intron | 15.0% |
| !! | TTGATAAAAAACAAACAAAA+GGG | - | chr6.1:30572240-30572259 | None:intergenic | 15.0% |
| !! | TTGTTAATTTAGTATCTAAT+TGG | + | chr6.1:30575330-30575349 | MS.gene83993:intron | 15.0% |
| !! | TTTAAGGACTAAAATAAAAA+TGG | + | chr6.1:30576792-30576811 | MS.gene83993:intron | 15.0% |
| !!! | AAAATTAAAGTTTGTTCAAT+TGG | + | chr6.1:30572469-30572488 | MS.gene83993:intron | 15.0% |
| !!! | AAATTAAAGTTTGTTCAATT+GGG | + | chr6.1:30572470-30572489 | MS.gene83993:intron | 15.0% |
| !!! | AGTAAAAGTTTTTTTAATAC+AGG | + | chr6.1:30573351-30573370 | MS.gene83993:intron | 15.0% |
| !!! | GCATTTTTCTTTAAAAAAAA+AGG | + | chr6.1:30573205-30573224 | MS.gene83993:intron | 15.0% |
| !!! | TAAATTATTATTAAGAGTGT+CGG | - | chr6.1:30573079-30573098 | None:intergenic | 15.0% |
| !!! | TTTTCTTTAAAAAAAAAGGT+TGG | + | chr6.1:30573209-30573228 | MS.gene83993:intron | 15.0% |
| !! | AAACATCACATGTATTATAA+AGG | - | chr6.1:30576192-30576211 | None:intergenic | 20.0% |
| !! | AAACTTTACAACAAAAGAAA+AGG | - | chr6.1:30572203-30572222 | None:intergenic | 20.0% |
| !! | AAATAATGATGAACATTAAG+GGG | - | chr6.1:30576327-30576346 | None:intergenic | 20.0% |
| !! | AACAGAAAATCAAAAAGTTT+AGG | - | chr6.1:30575645-30575664 | None:intergenic | 20.0% |
| !! | AACTTTACAACAAAAGAAAA+GGG | - | chr6.1:30572202-30572221 | None:intergenic | 20.0% |
| !! | AATAAAAAATCTGACTTCAA+GGG | - | chr6.1:30576944-30576963 | None:intergenic | 20.0% |
| !! | AATAACAAAGTCTATCATTA+TGG | + | chr6.1:30572965-30572984 | MS.gene83993:intron | 20.0% |
| !! | ACAGAAAATCAAAAAGTTTA+GGG | - | chr6.1:30575644-30575663 | None:intergenic | 20.0% |
| !! | ATTAAAATTAACCCTTAACA+TGG | + | chr6.1:30576364-30576383 | MS.gene83993:intron | 20.0% |
| !! | ATTATTAGTATAAGGTTTGT+AGG | + | chr6.1:30573722-30573741 | MS.gene83993:intron | 20.0% |
| !! | ATTCATACAAACAAACAAAA+GGG | - | chr6.1:30572431-30572450 | None:intergenic | 20.0% |
| !! | GTAAATAATGATGAACATTA+AGG | - | chr6.1:30576329-30576348 | None:intergenic | 20.0% |
| !! | GTTAATTTAGTATCTAATTG+GGG | + | chr6.1:30575332-30575351 | MS.gene83993:intron | 20.0% |
| !! | TAATAAAAAATCTGACTTCA+AGG | - | chr6.1:30576945-30576964 | None:intergenic | 20.0% |
| !! | TACAAACCTTATACTAATAA+TGG | - | chr6.1:30573723-30573742 | None:intergenic | 20.0% |
| !! | TATTCATACAAACAAACAAA+AGG | - | chr6.1:30572432-30572451 | None:intergenic | 20.0% |
| !! | TATTTATTATTCATACGTGT+GGG | + | chr6.1:30573849-30573868 | MS.gene83993:intron | 20.0% |
| !! | TTATTCGAAATCTCATTAAA+AGG | + | chr6.1:30575260-30575279 | MS.gene83993:intron | 20.0% |
| !! | TTATTTATTATTCATACGTG+TGG | + | chr6.1:30573848-30573867 | MS.gene83993:intron | 20.0% |
| !! | TTCAGTGTAATTATAAGTAT+TGG | - | chr6.1:30572625-30572644 | None:intergenic | 20.0% |
| !! | TTCATACAAAACAAACAAAA+GGG | - | chr6.1:30572779-30572798 | None:intergenic | 20.0% |
| !! | TTCTTACCAATAATGTATAT+AGG | + | chr6.1:30573463-30573482 | MS.gene83993:intron | 20.0% |
| !! | TTGAGTGTAATTATATGTTT+CGG | + | chr6.1:30573113-30573132 | MS.gene83993:intron | 20.0% |
| !! | TTTCTATTTACACTTTAACT+TGG | + | chr6.1:30575584-30575603 | MS.gene83993:intron | 20.0% |
| !!! | AATAGTACAAAAGTATCATA+CGG | - | chr6.1:30575378-30575397 | None:intergenic | 20.0% |
| !!! | ATTGTTGATTTTTCTAACTT+AGG | + | chr6.1:30574290-30574309 | MS.gene83993:intron | 20.0% |
| !!! | TAAAAAGTGTTTTCAACAAA+AGG | - | chr6.1:30574773-30574792 | None:intergenic | 20.0% |
| !!! | TATTAATTTTTTTACCAGTC+AGG | + | chr6.1:30576960-30576979 | MS.gene83993:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | chr6.1:30572650-30572669 | MS.gene83993:intron | 20.0% |
| ! | AAAACCAAAAAGAACAGATT+GGG | + | chr6.1:30576430-30576449 | MS.gene83993:CDS | 25.0% |
| ! | AAATAAGCATAGCAAACAAA+AGG | - | chr6.1:30573834-30573853 | None:intergenic | 25.0% |
| ! | AGATTATAATCTGTGAAACA+TGG | - | chr6.1:30572711-30572730 | None:intergenic | 25.0% |
| ! | ATAAAAATGGGTATGGTATA+AGG | + | chr6.1:30576805-30576824 | MS.gene83993:intron | 25.0% |
| ! | CAATACAGAAACAAACAAAA+GGG | - | chr6.1:30572378-30572397 | None:intergenic | 25.0% |
| ! | CTGTATTAAATAGCATATAC+TGG | + | chr6.1:30573623-30573642 | MS.gene83993:intron | 25.0% |
| ! | CTTTGTAACAAAAACTTTCA+AGG | + | chr6.1:30576882-30576901 | MS.gene83993:intron | 25.0% |
| ! | GAACGTTATATACACAAAAT+AGG | - | chr6.1:30573256-30573275 | None:intergenic | 25.0% |
| ! | GACTAAAATAAAAATGGGTA+TGG | + | chr6.1:30576798-30576817 | MS.gene83993:intron | 25.0% |
| ! | GACTCAACAAACAAATATAT+TGG | - | chr6.1:30576724-30576743 | None:intergenic | 25.0% |
| ! | GCTGCCAAAAAAAAATAAAT+TGG | - | chr6.1:30574614-30574633 | None:intergenic | 25.0% |
| ! | GGGTCATAAAAAAAATCAAA+AGG | - | chr6.1:30572358-30572377 | None:intergenic | 25.0% |
| ! | GTTCATACAAAACAAACAAA+AGG | - | chr6.1:30572780-30572799 | None:intergenic | 25.0% |
| ! | TCAATACAGAAACAAACAAA+AGG | - | chr6.1:30572379-30572398 | None:intergenic | 25.0% |
| ! | TCATATATGTGTAATTAGCT+TGG | + | chr6.1:30575751-30575770 | MS.gene83993:intron | 25.0% |
| ! | TCTGAAAATTAGATGTTACA+AGG | + | chr6.1:30574457-30574476 | MS.gene83993:intron | 25.0% |
| ! | TGAACAAAAGTCAAGAAATT+TGG | - | chr6.1:30573994-30574013 | None:intergenic | 25.0% |
| ! | TTATCAATAACCGCAAAAAT+TGG | + | chr6.1:30572253-30572272 | MS.gene83993:intron | 25.0% |
| ! | TTCTGTTATTGCAAATGTTT+CGG | + | chr6.1:30573905-30573924 | MS.gene83993:intron | 25.0% |
| ! | TTGAAGAAATGGGAATATTA+AGG | + | chr6.1:30577164-30577183 | MS.gene83993:CDS | 25.0% |
| ! | TTGAAGCCTATATACATTAT+TGG | - | chr6.1:30573472-30573491 | None:intergenic | 25.0% |
| ! | TTGTAGATTGAAGAAAATAG+CGG | + | chr6.1:30573546-30573565 | MS.gene83993:intron | 25.0% |
| ! | TTGTATAATATGTTAACCTG+TGG | + | chr6.1:30575869-30575888 | MS.gene83993:intron | 25.0% |
| ! | TTTCAATCACGCTAATAATT+TGG | - | chr6.1:30576295-30576314 | None:intergenic | 25.0% |
| !! | AAATGTGGATAATTCACTTT+TGG | + | chr6.1:30574881-30574900 | MS.gene83993:intron | 25.0% |
| !! | AAATTTGGTAACTACATCAT+GGG | - | chr6.1:30574577-30574596 | None:intergenic | 25.0% |
| !! | ATATTAGTCATTGGCTAAAT+TGG | + | chr6.1:30576994-30577013 | MS.gene83993:intron | 25.0% |
| !! | CGAATAATGATTTGAACTTT+TGG | - | chr6.1:30575247-30575266 | None:intergenic | 25.0% |
| !! | TAATAAAACGACATGGTTTT+CGG | - | chr6.1:30577048-30577067 | None:intergenic | 25.0% |
| !! | TGAAAGTTTTTGTTACAAAG+TGG | - | chr6.1:30576882-30576901 | None:intergenic | 25.0% |
| !! | TTAAGTTTTCGTCAAAAACT+TGG | - | chr6.1:30572546-30572565 | None:intergenic | 25.0% |
| !! | TTCTAAACATTTGTCATTTC+AGG | + | chr6.1:30576539-30576558 | MS.gene83993:intron | 25.0% |
| !!! | AAAAGTATCATACGGAATAA+TGG | - | chr6.1:30575370-30575389 | None:intergenic | 25.0% |
| !!! | AAGAACTGAAATTTTTTTGC+AGG | - | chr6.1:30576497-30576516 | None:intergenic | 25.0% |
| !!! | ACTTACAAATGACTTTTTCA+TGG | - | chr6.1:30576652-30576671 | None:intergenic | 25.0% |
| !!! | CAGCTTTTTTATTGTTTGTT+TGG | + | chr6.1:30575076-30575095 | MS.gene83993:intron | 25.0% |
| !!! | TTTAACTTGGTTTAACAAGT+TGG | + | chr6.1:30575597-30575616 | MS.gene83993:intron | 25.0% |
| !!! | TTTTTTAGTATAAGCCTATC+AGG | - | chr6.1:30575803-30575822 | None:intergenic | 25.0% |
| AAACTGCAACTTTGTTCAAT+TGG | + | chr6.1:30572279-30572298 | MS.gene83993:intron | 30.0% | |
| AAACTTAAACTCTGGTCAAT+AGG | + | chr6.1:30572907-30572926 | MS.gene83993:intron | 30.0% | |
| AAATATGCCTTTGATAGAGA+AGG | - | chr6.1:30574056-30574075 | None:intergenic | 30.0% | |
| AACACGCCATTATTAGTATA+AGG | + | chr6.1:30573714-30573733 | MS.gene83993:intron | 30.0% | |
| AACTGCAAAATCCATGTTAA+GGG | - | chr6.1:30576378-30576397 | None:intergenic | 30.0% | |
| AACTGCAACTTTGTTCAATT+GGG | + | chr6.1:30572280-30572299 | MS.gene83993:intron | 30.0% | |
| AACTTAAACTCTGGTCAATA+GGG | + | chr6.1:30572908-30572927 | MS.gene83993:intron | 30.0% | |
| AATTTATCAAGATGCTGATG+AGG | + | chr6.1:30576614-30576633 | MS.gene83993:CDS | 30.0% | |
| ACATTATTGGTAAGAATCTC+AGG | - | chr6.1:30573459-30573478 | None:intergenic | 30.0% | |
| ACTTTGGTGAACAAATTGTA+TGG | + | chr6.1:30575523-30575542 | MS.gene83993:intron | 30.0% | |
| AGAATATGTAGGAAGAAGAA+AGG | - | chr6.1:30574114-30574133 | None:intergenic | 30.0% | |
| AGATGTTACAAGGTTATTTG+CGG | + | chr6.1:30574467-30574486 | MS.gene83993:intron | 30.0% | |
| AGCTGTACTAACCTATATTT+AGG | - | chr6.1:30575061-30575080 | None:intergenic | 30.0% | |
| CAAAACCAAAAAGAACAGAT+TGG | + | chr6.1:30576429-30576448 | MS.gene83993:CDS | 30.0% | |
| CACTTTCTTATATTTGATCC+TGG | + | chr6.1:30576684-30576703 | MS.gene83993:intron | 30.0% | |
| CAGCATCTTGATAAATTTCA+CGG | - | chr6.1:30576611-30576630 | None:intergenic | 30.0% | |
| CTATCAATGTGTAAACTACA+GGG | + | chr6.1:30576745-30576764 | MS.gene83993:intron | 30.0% | |
| CTTATGTATGAATGTTGATG+TGG | + | chr6.1:30573429-30573448 | MS.gene83993:intron | 30.0% | |
| CTTCGACAAATATTAGTCAT+TGG | + | chr6.1:30576985-30577004 | MS.gene83993:intron | 30.0% | |
| GAACAAGAGAATTTGCATAA+CGG | - | chr6.1:30573672-30573691 | None:intergenic | 30.0% | |
| GAATAGTTAGTACATGACAT+TGG | - | chr6.1:30575225-30575244 | None:intergenic | 30.0% | |
| GAATATGTAGGAAGAAGAAA+GGG | - | chr6.1:30574113-30574132 | None:intergenic | 30.0% | |
| GCAAACATAATAAAACGACA+TGG | - | chr6.1:30577055-30577074 | None:intergenic | 30.0% | |
| GCAACAATTACAGAATATGT+AGG | - | chr6.1:30574125-30574144 | None:intergenic | 30.0% | |
| GTCAAAAACTTGGAACAAAA+GGG | - | chr6.1:30572536-30572555 | None:intergenic | 30.0% | |
| GTTGTAACCATATTTGCAAA+GGG | + | chr6.1:30575474-30575493 | MS.gene83993:CDS | 30.0% | |
| TAACTGCAAAATCCATGTTA+AGG | - | chr6.1:30576379-30576398 | None:intergenic | 30.0% | |
| TATAAGCGTAAAAATGCTGA+GGG | - | chr6.1:30575306-30575325 | None:intergenic | 30.0% | |
| TATAAGCTTTCGATAACACA+TGG | - | chr6.1:30574197-30574216 | None:intergenic | 30.0% | |
| TATACAAAACCTATGAAGCA+CGG | - | chr6.1:30573177-30573196 | None:intergenic | 30.0% | |
| TATATTTGATCCTGGCTATA+TGG | + | chr6.1:30576692-30576711 | MS.gene83993:intron | 30.0% | |
| TCTATCAATGTGTAAACTAC+AGG | + | chr6.1:30576744-30576763 | MS.gene83993:intron | 30.0% | |
| TTGTAACCATATTTGCAAAG+GGG | + | chr6.1:30575475-30575494 | MS.gene83993:CDS | 30.0% | |
| TTTGACGAAAACTTAAACTC+TGG | + | chr6.1:30572550-30572569 | MS.gene83993:intron | 30.0% | |
| ! | AAGACGAATTTCAATTTTGG+TGG | - | chr6.1:30575945-30575964 | None:intergenic | 30.0% |
| ! | AGCAAGACGAATTTCAATTT+TGG | - | chr6.1:30575948-30575967 | None:intergenic | 30.0% |
| ! | GAAATTTGGTAACTACATCA+TGG | - | chr6.1:30574578-30574597 | None:intergenic | 30.0% |
| ! | GAACTCTTTTCAAAGCATAA+GGG | + | chr6.1:30575144-30575163 | MS.gene83993:intron | 30.0% |
| ! | TGAACTCTTTTCAAAGCATA+AGG | + | chr6.1:30575143-30575162 | MS.gene83993:intron | 30.0% |
| ! | TTATCCCAATCTGTTCTTTT+TGG | - | chr6.1:30576437-30576456 | None:intergenic | 30.0% |
| ! | TTCACGGAAAAATTTGTTCA+GGG | - | chr6.1:30576595-30576614 | None:intergenic | 30.0% |
| ! | TTGTTTGGAAAGGTATGAAT+GGG | + | chr6.1:30575723-30575742 | MS.gene83993:intron | 30.0% |
| ! | TTTCACGGAAAAATTTGTTC+AGG | - | chr6.1:30576596-30576615 | None:intergenic | 30.0% |
| !! | GTTTTTCAAAATCGCTTGTT+TGG | + | chr6.1:30575708-30575727 | MS.gene83993:CDS | 30.0% |
| !!! | ATCTGTTCTTTTTGGTTTTG+AGG | - | chr6.1:30576429-30576448 | None:intergenic | 30.0% |
| !!! | ATTTTTTTCCACAGATCAGT+AGG | - | chr6.1:30575418-30575437 | None:intergenic | 30.0% |
| !!! | GTGATGGTTTTTTGGATTAT+TGG | + | chr6.1:30576268-30576287 | MS.gene83993:intron | 30.0% |
| !!! | TGTCGTTTTATTATGTTTGC+AGG | + | chr6.1:30577055-30577074 | MS.gene83993:intron | 30.0% |
| AAAGTTGCTTACAACCTGAT+AGG | + | chr6.1:30575786-30575805 | MS.gene83993:intron | 35.0% | |
| ACAAAATTCCTACTGATCTG+TGG | + | chr6.1:30575407-30575426 | MS.gene83993:intron | 35.0% | |
| ACTTTCAAGGACCAAAACTT+TGG | + | chr6.1:30576895-30576914 | MS.gene83993:intron | 35.0% | |
| AGATAAAACTCCAAACCACT+TGG | + | chr6.1:30575178-30575197 | MS.gene83993:intron | 35.0% | |
| AGCTTATATGTTCCAGAATG+TGG | + | chr6.1:30574209-30574228 | MS.gene83993:intron | 35.0% | |
| ATCTTCAACAAAGGCTTCTT+TGG | - | chr6.1:30572047-30572066 | None:intergenic | 35.0% | |
| ATTATTCATACGTGTGGGTT+TGG | + | chr6.1:30573854-30573873 | MS.gene83993:intron | 35.0% | |
| ATTGTATCTTGACCGTTGAA+AGG | + | chr6.1:30574856-30574875 | MS.gene83993:intron | 35.0% | |
| CATGGCAATAACAACATTTC+AGG | - | chr6.1:30574179-30574198 | None:intergenic | 35.0% | |
| CGTCAAAAACTTGGAACAAA+AGG | - | chr6.1:30572537-30572556 | None:intergenic | 35.0% | |
| CTAAAGCTGAATCTATTCAC+TGG | + | chr6.1:30575966-30575985 | MS.gene83993:CDS | 35.0% | |
| CTCAAAGTGATCTTCAACAA+AGG | - | chr6.1:30572056-30572075 | None:intergenic | 35.0% | |
| CTGATTGAAGATATAACCAC+AGG | - | chr6.1:30575888-30575907 | None:intergenic | 35.0% | |
| GAAGTGGTTGAGTTTGATAT+GGG | - | chr6.1:30572155-30572174 | None:intergenic | 35.0% | |
| GAGAAAGATGAAAACCTTGA+TGG | + | chr6.1:30576561-30576580 | MS.gene83993:CDS | 35.0% | |
| GATCTGTGGAAAAAAATTGC+AGG | + | chr6.1:30575421-30575440 | MS.gene83993:intron | 35.0% | |
| GGTCTCTTTGTTGAATTCTA+GGG | - | chr6.1:30575996-30576015 | None:intergenic | 35.0% | |
| GGTTGTAACCATATTTGCAA+AGG | + | chr6.1:30575473-30575492 | MS.gene83993:CDS | 35.0% | |
| GTATAAGCGTAAAAATGCTG+AGG | - | chr6.1:30575307-30575326 | None:intergenic | 35.0% | |
| GTTGAATCCTTCTCTATCAA+AGG | + | chr6.1:30574046-30574065 | MS.gene83993:CDS | 35.0% | |
| TAACTACATCATGGGAAAAC+AGG | - | chr6.1:30574569-30574588 | None:intergenic | 35.0% | |
| TAATGATGAACATTAAGGGG+TGG | - | chr6.1:30576324-30576343 | None:intergenic | 35.0% | |
| TATCTAATTGGGGAGAAGTT+TGG | + | chr6.1:30575342-30575361 | MS.gene83993:intron | 35.0% | |
| TCAAAATCGCTTGTTTGGAA+AGG | + | chr6.1:30575713-30575732 | MS.gene83993:CDS | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | + | chr6.1:30572656-30572675 | MS.gene83993:intron | 35.0% | |
| TGAAGTGGTTGAGTTTGATA+TGG | - | chr6.1:30572156-30572175 | None:intergenic | 35.0% | |
| TGGTCTCTTTGTTGAATTCT+AGG | - | chr6.1:30575997-30576016 | None:intergenic | 35.0% | |
| TGGTTGCTAAGCCTAAATAT+AGG | + | chr6.1:30575047-30575066 | MS.gene83993:CDS | 35.0% | |
| TGTAACCATATTTGCAAAGG+GGG | + | chr6.1:30575476-30575495 | MS.gene83993:CDS | 35.0% | |
| TGTTGAAGATCACTTTGAGT+TGG | + | chr6.1:30572057-30572076 | MS.gene83993:CDS | 35.0% | |
| TTCAAAGCATAAGGGTAAAG+TGG | + | chr6.1:30575152-30575171 | MS.gene83993:intron | 35.0% | |
| TTGTATCTTGACCGTTGAAA+GGG | + | chr6.1:30574857-30574876 | MS.gene83993:intron | 35.0% | |
| TTTAAGAGGGTCAAGAGTAA+TGG | - | chr6.1:30572104-30572123 | None:intergenic | 35.0% | |
| TTTATTGTTTGTTTGGACCG+TGG | + | chr6.1:30575083-30575102 | MS.gene83993:intron | 35.0% | |
| ! | ATCCACATTTTCCCTTTCAA+CGG | - | chr6.1:30574871-30574890 | None:intergenic | 35.0% |
| ! | CGTAGAATTCAGGTTTAAGA+GGG | - | chr6.1:30572117-30572136 | None:intergenic | 35.0% |
| ! | CTATACTGTGATTTTCACGA+AGG | - | chr6.1:30576113-30576132 | None:intergenic | 35.0% |
| ! | CTTGTTTGGAAAGGTATGAA+TGG | + | chr6.1:30575722-30575741 | MS.gene83993:intron | 35.0% |
| ! | GCAGTTTTTGCCAATTTTTG+CGG | - | chr6.1:30572266-30572285 | None:intergenic | 35.0% |
| ! | TTTCACTGCAGCTTTATGTT+TGG | + | chr6.1:30576067-30576086 | MS.gene83993:intron | 35.0% |
| !! | ACAGAAGTTTGCTAGTATTG+TGG | - | chr6.1:30576229-30576248 | None:intergenic | 35.0% |
| !! | CGTTTTATTATGTTTGCAGG+TGG | + | chr6.1:30577058-30577077 | MS.gene83993:intron | 35.0% |
| !! | GAAAGCATTACTGTTGACTT+TGG | + | chr6.1:30575507-30575526 | MS.gene83993:CDS | 35.0% |
| !! | TGGATAATTCACTTTTGGCT+AGG | + | chr6.1:30574886-30574905 | MS.gene83993:intron | 35.0% |
| !! | TTGTTTTGTCCTATGAAGCA+CGG | + | chr6.1:30573026-30573045 | MS.gene83993:intron | 35.0% |
| !! | TTTGGCTTTCACTTCAAGAT+CGG | - | chr6.1:30572029-30572048 | None:intergenic | 35.0% |
| !!! | GTTCTTTTTGGTTTTGAGGA+CGG | - | chr6.1:30576425-30576444 | None:intergenic | 35.0% |
| !!! | GTTGTAAGCAACTTTTTTCC+AGG | - | chr6.1:30575781-30575800 | None:intergenic | 35.0% |
| !!! | TGAATTTTTAGCATGCGTGA+TGG | + | chr6.1:30576148-30576167 | MS.gene83993:intron | 35.0% |
| !!! | TTCTTTTTGGTTTTGAGGAC+GGG | - | chr6.1:30576424-30576443 | None:intergenic | 35.0% |
| AAAACGTATGCATCTTCTCC+AGG | - | chr6.1:30575693-30575712 | None:intergenic | 40.0% | |
| AAACGTATGCATCTTCTCCA+GGG | - | chr6.1:30575692-30575711 | None:intergenic | 40.0% | |
| AACAGATTGGGATAAGCTTG+AGG | + | chr6.1:30576442-30576461 | MS.gene83993:CDS | 40.0% | |
| AACTTTGGTCTGAGTGGAAT+TGG | + | chr6.1:30576910-30576929 | MS.gene83993:intron | 40.0% | |
| AAGCTGAATCTATTCACTGG+AGG | + | chr6.1:30575969-30575988 | MS.gene83993:CDS | 40.0% | |
| ACATCATTGACCAAGTGGTT+TGG | - | chr6.1:30575191-30575210 | None:intergenic | 40.0% | |
| AGAAACAACGTGAATGAACG+AGG | - | chr6.1:30573889-30573908 | None:intergenic | 40.0% | |
| ATCAAACTCAACCACTTCAC+TGG | + | chr6.1:30572157-30572176 | MS.gene83993:CDS | 40.0% | |
| ATGGCATGGAGTTGAAGAAA+TGG | + | chr6.1:30577153-30577172 | MS.gene83993:CDS | 40.0% | |
| ATGGTTACAACCACTTCTTC+AGG | - | chr6.1:30575465-30575484 | None:intergenic | 40.0% | |
| CTAGGAAACTAACTTGAGCT+TGG | + | chr6.1:30574904-30574923 | MS.gene83993:intron | 40.0% | |
| GAAGAAGAAAGGGAAAGACA+AGG | - | chr6.1:30574103-30574122 | None:intergenic | 40.0% | |
| GATATAGCACTGTTGTGTAG+CGG | - | chr6.1:30573584-30573603 | None:intergenic | 40.0% | |
| GTAACTGTGACATTGATGCT+AGG | - | chr6.1:30577026-30577045 | None:intergenic | 40.0% | |
| TATTTGTCGAAGAACCTGAC+TGG | - | chr6.1:30576977-30576996 | None:intergenic | 40.0% | |
| TCTACAAACTGGAAGGAAGT+GGG | + | chr6.1:30577101-30577120 | MS.gene83993:CDS | 40.0% | |
| TGAGGCTCAAGTTAAGAAAG+AGG | + | chr6.1:30576460-30576479 | MS.gene83993:CDS | 40.0% | |
| TGGCATGGAGTTGAAGAAAT+GGG | + | chr6.1:30577154-30577173 | MS.gene83993:CDS | 40.0% | |
| TTACCAGAAACCTGAAGAAG+TGG | + | chr6.1:30575452-30575471 | MS.gene83993:CDS | 40.0% | |
| TTACCTGAAGCAATAGCCTT+AGG | - | chr6.1:30576028-30576047 | None:intergenic | 40.0% | |
| TTGGAGTTGTTTGTGTCTTG+TGG | + | chr6.1:30573228-30573247 | MS.gene83993:intron | 40.0% | |
| TTGGATCATACCATATAGCC+AGG | - | chr6.1:30576705-30576724 | None:intergenic | 40.0% | |
| ! | AATAGCCTTAGGTGCAATTG+TGG | - | chr6.1:30576017-30576036 | None:intergenic | 40.0% |
| ! | CAAAGGCATATTTGCGCAAA+GGG | + | chr6.1:30574063-30574082 | MS.gene83993:CDS | 40.0% |
| ! | GCGTAGAATTCAGGTTTAAG+AGG | - | chr6.1:30572118-30572137 | None:intergenic | 40.0% |
| ! | TCAAAGGCATATTTGCGCAA+AGG | + | chr6.1:30574062-30574081 | MS.gene83993:CDS | 40.0% |
| ! | TGTAATTAGCTTGGATCACC+TGG | + | chr6.1:30575760-30575779 | MS.gene83993:intron | 40.0% |
| ! | TTCCACTCAGACCAAAGTTT+TGG | - | chr6.1:30576909-30576928 | None:intergenic | 40.0% |
| !! | CAAAGTTTTGTCACGAGTGA+TGG | + | chr6.1:30576252-30576271 | MS.gene83993:intron | 40.0% |
| !! | TATATGTTTCGGTGTCGTGT+TGG | + | chr6.1:30573124-30573143 | MS.gene83993:intron | 40.0% |
| !! | TCAGTAAATGCGTTCTGAGA+TGG | + | chr6.1:30574375-30574394 | MS.gene83993:intron | 40.0% |
| !! | TGCTAAGACTGCTTTAGAGA+CGG | + | chr6.1:30574666-30574685 | MS.gene83993:CDS | 40.0% |
| !!! | GGCTGAACATCTTTTGAAGT+TGG | - | chr6.1:30574998-30575017 | None:intergenic | 40.0% |
| !!! | TGTCACGAGTGATGGTTTTT+TGG | + | chr6.1:30576260-30576279 | MS.gene83993:intron | 40.0% |
| AACTCTGTTCTATGAAGCCC+AGG | + | chr6.1:30572565-30572584 | MS.gene83993:intron | 45.0% | |
| ACAGGAAAAGTCCACAACAC+AGG | + | chr6.1:30574970-30574989 | MS.gene83993:CDS | 45.0% | |
| AGAGACCACAATTGCACCTA+AGG | + | chr6.1:30576009-30576028 | MS.gene83993:CDS | 45.0% | |
| AGTGCTGTCTACAAACTGGA+AGG | + | chr6.1:30577094-30577113 | MS.gene83993:CDS | 45.0% | |
| AGTGTCAACATTGATGTCCC+TGG | + | chr6.1:30575672-30575691 | MS.gene83993:CDS | 45.0% | |
| ATCTGATACCGTACCTACAC+AGG | + | chr6.1:30574952-30574971 | MS.gene83993:CDS | 45.0% | |
| ATTGTTTGTTTGGACCGTGG+AGG | + | chr6.1:30575086-30575105 | MS.gene83993:intron | 45.0% | |
| ATTTGCAAAGGGGGTCTCAA+AGG | + | chr6.1:30575485-30575504 | MS.gene83993:CDS | 45.0% | |
| CATGTCTACACATAACCCAC+AGG | - | chr6.1:30573942-30573961 | None:intergenic | 45.0% | |
| CGTCAACATCATTGACCAAG+TGG | - | chr6.1:30575196-30575215 | None:intergenic | 45.0% | |
| CTAAACATTAGCACCCTCCA+CGG | - | chr6.1:30575103-30575122 | None:intergenic | 45.0% | |
| GAACAGTGCTGTCTACAAAC+TGG | + | chr6.1:30577090-30577109 | MS.gene83993:CDS | 45.0% | |
| GAAGAAAGGGAAAGACAAGG+TGG | - | chr6.1:30574100-30574119 | None:intergenic | 45.0% | |
| GAAGGAAGTGGGAACAAAGA+AGG | + | chr6.1:30577112-30577131 | MS.gene83993:CDS | 45.0% | |
| GAATGTGACAAACGCATTGC+AGG | + | chr6.1:30574736-30574755 | MS.gene83993:CDS | 45.0% | |
| GACCAAAACTTTGGTCTGAG+TGG | + | chr6.1:30576904-30576923 | MS.gene83993:intron | 45.0% | |
| GACCGTTGAAAGGGAAAATG+TGG | + | chr6.1:30574866-30574885 | MS.gene83993:intron | 45.0% | |
| GGAAACTAACTTGAGCTTGG+TGG | + | chr6.1:30574907-30574926 | MS.gene83993:intron | 45.0% | |
| GTCTACAAACTGGAAGGAAG+TGG | + | chr6.1:30577100-30577119 | MS.gene83993:CDS | 45.0% | |
| TCAGCCAGAAGATCTTTCAG+AGG | + | chr6.1:30575012-30575031 | MS.gene83993:CDS | 45.0% | |
| TCGGAATGTAACTGTCCTGT+GGG | + | chr6.1:30573924-30573943 | MS.gene83993:intron | 45.0% | |
| TGAAGTTGGATCCTGTGTTG+TGG | - | chr6.1:30574984-30575003 | None:intergenic | 45.0% | |
| TGAGACCCCCTTTGCAAATA+TGG | - | chr6.1:30575484-30575503 | None:intergenic | 45.0% | |
| TTCGGAATGTAACTGTCCTG+TGG | + | chr6.1:30573923-30573942 | MS.gene83993:intron | 45.0% | |
| TTCTTCAACTCCATGCCATC+TGG | - | chr6.1:30577152-30577171 | None:intergenic | 45.0% | |
| TTGTTTGTTTGGACCGTGGA+GGG | + | chr6.1:30575087-30575106 | MS.gene83993:intron | 45.0% | |
| ! | AAACTGACTCACCAGTGAAG+TGG | - | chr6.1:30572171-30572190 | None:intergenic | 45.0% |
| ! | CAACCACTTCTTCAGGTTTC+TGG | - | chr6.1:30575458-30575477 | None:intergenic | 45.0% |
| ! | GGACTTTTCCTGTGTAGGTA+CGG | - | chr6.1:30574963-30574982 | None:intergenic | 45.0% |
| ! | GTTCCAGAATGTGGTTCTGT+GGG | + | chr6.1:30574218-30574237 | MS.gene83993:intron | 45.0% |
| ! | GTTGTGGACTTTTCCTGTGT+AGG | - | chr6.1:30574968-30574987 | None:intergenic | 45.0% |
| ! | TGATTTGTCTGCAGCCAATG+AGG | - | chr6.1:30574695-30574714 | None:intergenic | 45.0% |
| ! | TGGTGGACAAGACTTCATAC+CGG | - | chr6.1:30575928-30575947 | None:intergenic | 45.0% |
| ! | TGTTCCAGAATGTGGTTCTG+TGG | + | chr6.1:30574217-30574236 | MS.gene83993:intron | 45.0% |
| ! | TTCCAGAATGTGGTTCTGTG+GGG | + | chr6.1:30574219-30574238 | MS.gene83993:intron | 45.0% |
| !! | GCTAAGACTGCTTTAGAGAC+GGG | + | chr6.1:30574667-30574686 | MS.gene83993:CDS | 45.0% |
| !! | TATTAAGAGTGTCGGCGTGT+CGG | - | chr6.1:30573071-30573090 | None:intergenic | 45.0% |
| ACACGTCTAACCCTAACCCA+AGG | - | chr6.1:30572595-30572614 | None:intergenic | 50.0% | |
| ACTTCATACCGGCATCTGGA+AGG | - | chr6.1:30575917-30575936 | None:intergenic | 50.0% | |
| AGATCGTACCTTCCAGATGC+CGG | + | chr6.1:30575906-30575925 | MS.gene83993:intron | 50.0% | |
| CAAGACTTCATACCGGCATC+TGG | - | chr6.1:30575921-30575940 | None:intergenic | 50.0% | |
| CAATGCGTGCATGAAGCTTG+AGG | + | chr6.1:30574633-30574652 | MS.gene83993:CDS | 50.0% | |
| GCACCTAAGGCTATTGCTTC+AGG | + | chr6.1:30576022-30576041 | MS.gene83993:CDS | 50.0% | |
| GCACGATCAGCGTAGAATTC+AGG | - | chr6.1:30572127-30572146 | None:intergenic | 50.0% | |
| GGAAGTGGGAACAAAGAAGG+TGG | + | chr6.1:30577115-30577134 | MS.gene83993:CDS | 50.0% | |
| GGCTTAGCAACCACCACTAT+CGG | - | chr6.1:30575040-30575059 | None:intergenic | 50.0% | |
| GGTCTGAGTGGAATTGGACT+CGG | + | chr6.1:30576916-30576935 | MS.gene83993:intron | 50.0% | |
| GTGGGAACAAAGAAGGTGGA+AGG | + | chr6.1:30577119-30577138 | MS.gene83993:CDS | 50.0% | |
| TCTTTCAGAGGAGCCGATAG+TGG | + | chr6.1:30575024-30575043 | MS.gene83993:CDS | 50.0% | |
| TGTCCTATGAAGCACGGATG+CGG | + | chr6.1:30573032-30573051 | MS.gene83993:intron | 50.0% | |
| TGTTTGCAGGTGGAGTCGAA+TGG | + | chr6.1:30577068-30577087 | MS.gene83993:intron | 50.0% | |
| TTCAACTCCATGCCATCTGG+AGG | - | chr6.1:30577149-30577168 | None:intergenic | 50.0% | |
| TTTAGAGACGGGTGCCTCAT+TGG | + | chr6.1:30574678-30574697 | MS.gene83993:CDS | 50.0% | |
| ! | GGCTCCTCTGAAAGATCTTC+TGG | - | chr6.1:30575019-30575038 | None:intergenic | 50.0% |
| !! | CGTGGAGGGTGCTAATGTTT+AGG | + | chr6.1:30575101-30575120 | MS.gene83993:intron | 50.0% |
| !! | GAAGAGTGTCCGTGCTTCAT+AGG | + | chr6.1:30573165-30573184 | MS.gene83993:intron | 50.0% |
| !! | TTTCGGTGTCGTGTTGGTGT+TGG | + | chr6.1:30573130-30573149 | MS.gene83993:intron | 50.0% |
| !!! | GGTTTTGAGGACGGGTAAGT+GGG | - | chr6.1:30576416-30576435 | None:intergenic | 50.0% |
| !!! | TGGTTTTGAGGACGGGTAAG+TGG | - | chr6.1:30576417-30576436 | None:intergenic | 50.0% |
| AGCCCCACAGAACCACATTC+TGG | - | chr6.1:30574224-30574243 | None:intergenic | 55.0% | |
| AGGAAGTCCTCCAGATGGCA+TGG | + | chr6.1:30577139-30577158 | MS.gene83993:CDS | 55.0% | |
| ATGAAGCCCAGGCACTCCTT+GGG | + | chr6.1:30572576-30572595 | MS.gene83993:intron | 55.0% | |
| CGGGTAAGTGGGTCTTTGAG+TGG | - | chr6.1:30576405-30576424 | None:intergenic | 55.0% | |
| GTGGAAGGAAGTCCTCCAGA+TGG | + | chr6.1:30577134-30577153 | MS.gene83993:CDS | 55.0% | |
| TATGAAGCCCAGGCACTCCT+TGG | + | chr6.1:30572575-30572594 | MS.gene83993:intron | 55.0% | |
| TGTCCGCATCCGTGCTTCAT+AGG | - | chr6.1:30573038-30573057 | None:intergenic | 55.0% | |
| ! | AGAATGTGGTTCTGTGGGGC+TGG | + | chr6.1:30574223-30574242 | MS.gene83993:intron | 55.0% |
| ! | TTCAGAGGAGCCGATAGTGG+TGG | + | chr6.1:30575027-30575046 | MS.gene83993:CDS | 55.0% |
| CCCAGGCACTCCTTGGGTTA+GGG | + | chr6.1:30572582-30572601 | MS.gene83993:intron | 60.0% | |
| TCAGGGCAGCATCGCCATCA+AGG | - | chr6.1:30576578-30576597 | None:intergenic | 60.0% | |
| TGAAGCACGGATGCGGACAC+CGG | + | chr6.1:30573039-30573058 | MS.gene83993:intron | 60.0% | |
| !! | ACCCTAACCCAAGGAGTGCC+TGG | - | chr6.1:30572586-30572605 | None:intergenic | 60.0% |
| !! | CCCTAACCCAAGGAGTGCCT+GGG | - | chr6.1:30572585-30572604 | None:intergenic | 60.0% |
| CGGCGTGTCAGTGTCGTGTC+TGG | + | chr6.1:30572676-30572695 | MS.gene83993:intron | 65.0% | |
| GCCCAGGCACTCCTTGGGTT+AGG | + | chr6.1:30572581-30572600 | MS.gene83993:intron | 65.0% | |
| ! | GTCGGCGTGTCGGTCGTGTC+CGG | - | chr6.1:30573061-30573080 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 30572019 | 30577184 | 30572019 | ID=MS.gene83993 |
| chr6.1 | mRNA | 30572019 | 30577184 | 30572019 | ID=MS.gene83993.t1;Parent=MS.gene83993 |
| chr6.1 | exon | 30572019 | 30572178 | 30572019 | ID=MS.gene83993.t1.exon1;Parent=MS.gene83993.t1 |
| chr6.1 | CDS | 30572019 | 30572178 | 30572019 | ID=cds.MS.gene83993.t1;Parent=MS.gene83993.t1 |
| chr6.1 | exon | 30574015 | 30574084 | 30574015 | ID=MS.gene83993.t1.exon2;Parent=MS.gene83993.t1 |
| chr6.1 | CDS | 30574015 | 30574084 | 30574015 | ID=cds.MS.gene83993.t1;Parent=MS.gene83993.t1 |
| chr6.1 | exon | 30574633 | 30574757 | 30574633 | ID=MS.gene83993.t1.exon3;Parent=MS.gene83993.t1 |
| chr6.1 | CDS | 30574633 | 30574757 | 30574633 | ID=cds.MS.gene83993.t1;Parent=MS.gene83993.t1 |
| chr6.1 | exon | 30574948 | 30575068 | 30574948 | ID=MS.gene83993.t1.exon4;Parent=MS.gene83993.t1 |
| chr6.1 | CDS | 30574948 | 30575068 | 30574948 | ID=cds.MS.gene83993.t1;Parent=MS.gene83993.t1 |
| chr6.1 | exon | 30575443 | 30575539 | 30575443 | ID=MS.gene83993.t1.exon5;Parent=MS.gene83993.t1 |
| chr6.1 | CDS | 30575443 | 30575539 | 30575443 | ID=cds.MS.gene83993.t1;Parent=MS.gene83993.t1 |
| chr6.1 | exon | 30575669 | 30575734 | 30575669 | ID=MS.gene83993.t1.exon6;Parent=MS.gene83993.t1 |
| chr6.1 | CDS | 30575669 | 30575734 | 30575669 | ID=cds.MS.gene83993.t1;Parent=MS.gene83993.t1 |
| chr6.1 | exon | 30575908 | 30576043 | 30575908 | ID=MS.gene83993.t1.exon7;Parent=MS.gene83993.t1 |
| chr6.1 | CDS | 30575908 | 30576043 | 30575908 | ID=cds.MS.gene83993.t1;Parent=MS.gene83993.t1 |
| chr6.1 | exon | 30576396 | 30576481 | 30576396 | ID=MS.gene83993.t1.exon8;Parent=MS.gene83993.t1 |
| chr6.1 | CDS | 30576396 | 30576481 | 30576396 | ID=cds.MS.gene83993.t1;Parent=MS.gene83993.t1 |
| chr6.1 | exon | 30576561 | 30576665 | 30576561 | ID=MS.gene83993.t1.exon9;Parent=MS.gene83993.t1 |
| chr6.1 | CDS | 30576561 | 30576665 | 30576561 | ID=cds.MS.gene83993.t1;Parent=MS.gene83993.t1 |
| chr6.1 | exon | 30577077 | 30577184 | 30577077 | ID=MS.gene83993.t1.exon10;Parent=MS.gene83993.t1 |
| chr6.1 | CDS | 30577077 | 30577184 | 30577077 | ID=cds.MS.gene83993.t1;Parent=MS.gene83993.t1 |
| Gene Sequence |
| Protein sequence |
