Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81472.t1 | XP_013452348.1 | 87.4 | 357 | 45 | 0 | 1 | 357 | 1 | 357 | 2.80E-166 | 594.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81472.t1 | Q0JL44 | 58.1 | 363 | 144 | 4 | 2 | 357 | 6 | 367 | 1.3e-103 | 377.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81472.t1 | A0A072UAF1 | 87.4 | 357 | 45 | 0 | 1 | 357 | 1 | 357 | 2.0e-166 | 594.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22341 | MS.gene81472 | PPI |
| MS.gene024651 | MS.gene81472 | PPI |
| MS.gene21632 | MS.gene81472 | PPI |
| MS.gene072762 | MS.gene81472 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81472.t1 | MTR_6g053290 | 96.639 | 357 | 12 | 0 | 1 | 357 | 1 | 357 | 0.0 | 710 |
| MS.gene81472.t1 | MTR_6g053290 | 92.000 | 375 | 12 | 1 | 1 | 357 | 1 | 375 | 0.0 | 697 |
| MS.gene81472.t1 | MTR_5g009930 | 63.200 | 375 | 119 | 5 | 1 | 357 | 1 | 374 | 1.53e-156 | 444 |
| MS.gene81472.t1 | MTR_5g009930 | 58.689 | 305 | 107 | 5 | 1 | 287 | 1 | 304 | 5.84e-117 | 341 |
| MS.gene81472.t1 | MTR_6g060735 | 60.000 | 95 | 27 | 2 | 196 | 287 | 59 | 145 | 1.00e-26 | 104 |
| MS.gene81472.t1 | MTR_6g060740 | 66.234 | 77 | 18 | 1 | 211 | 287 | 4 | 72 | 1.65e-25 | 98.6 |
| MS.gene81472.t1 | MTR_3g452710 | 34.228 | 149 | 91 | 2 | 2 | 143 | 11 | 159 | 7.36e-16 | 79.0 |
| MS.gene81472.t1 | MTR_3g452710 | 34.848 | 132 | 82 | 1 | 2 | 129 | 11 | 142 | 7.63e-15 | 75.9 |
| MS.gene81472.t1 | MTR_5g012030 | 37.500 | 96 | 60 | 0 | 1 | 96 | 1 | 96 | 6.20e-13 | 70.1 |
| MS.gene81472.t1 | MTR_5g012030 | 26.846 | 149 | 94 | 1 | 8 | 156 | 398 | 531 | 1.29e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81472.t1 | AT4G11260 | 64.345 | 359 | 125 | 2 | 1 | 357 | 1 | 358 | 1.28e-159 | 451 |
| MS.gene81472.t1 | AT4G23570 | 66.573 | 356 | 112 | 4 | 1 | 356 | 1 | 349 | 1.77e-155 | 441 |
| MS.gene81472.t1 | AT4G23570 | 66.573 | 356 | 112 | 4 | 1 | 356 | 1 | 349 | 1.77e-155 | 441 |
| MS.gene81472.t1 | AT4G23570 | 66.387 | 357 | 112 | 5 | 1 | 356 | 1 | 350 | 1.45e-153 | 436 |
| MS.gene81472.t1 | AT2G42810 | 30.370 | 135 | 90 | 1 | 2 | 132 | 13 | 147 | 6.27e-13 | 70.1 |
| MS.gene81472.t1 | AT2G42810 | 30.370 | 135 | 90 | 1 | 2 | 132 | 13 | 147 | 6.34e-13 | 70.1 |
| MS.gene81472.t1 | AT2G42810 | 29.530 | 149 | 98 | 2 | 2 | 143 | 13 | 161 | 6.43e-13 | 70.1 |
| MS.gene81472.t1 | AT2G42810 | 29.530 | 149 | 98 | 2 | 2 | 143 | 13 | 161 | 6.43e-13 | 70.1 |
| MS.gene81472.t1 | AT2G42810 | 29.530 | 149 | 98 | 2 | 2 | 143 | 13 | 161 | 6.43e-13 | 70.1 |
| MS.gene81472.t1 | AT1G04190 | 40.000 | 90 | 54 | 0 | 5 | 94 | 18 | 107 | 7.19e-12 | 66.2 |
| MS.gene81472.t1 | AT4G22670 | 40.000 | 95 | 57 | 0 | 8 | 102 | 129 | 223 | 7.54e-12 | 66.6 |
| MS.gene81472.t1 | AT1G62740 | 35.417 | 96 | 62 | 0 | 1 | 96 | 1 | 96 | 9.08e-12 | 66.6 |
Find 76 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCACTTCTTCAGGTTTC+TGG | 0.138730 | 6.4:-20491878 | None:intergenic |
| AGCAAGACGAATTTCAATTT+TGG | 0.199172 | 6.4:-20492480 | None:intergenic |
| TGGTCTCTTTGTTGAATTCT+AGG | 0.213353 | 6.4:-20492529 | None:intergenic |
| GCACGATCAGCGTAGAATTC+AGG | 0.293401 | 6.4:-20488579 | None:intergenic |
| TGAAGTGGTTGAGTTTGATA+TGG | 0.328758 | 6.4:-20488608 | None:intergenic |
| ATGGTTACAACCACTTCTTC+AGG | 0.346348 | 6.4:-20491885 | None:intergenic |
| GGCTCCTCTGAAAGATCTTC+TGG | 0.364330 | 6.4:-20491439 | None:intergenic |
| TTTAGAGACGGGTGCCTCAT+TGG | 0.365204 | 6.4:+20491101 | MS.gene81472:CDS |
| TTCTTCAACTCCATGCCATC+TGG | 0.365330 | 6.4:-20493701 | None:intergenic |
| AGCTGTACTAACCTATATTT+AGG | 0.377346 | 6.4:-20491481 | None:intergenic |
| GAATGTGACAAACGCATTGC+AGG | 0.417521 | 6.4:+20491159 | MS.gene81472:CDS |
| CAAGACTTCATACCGGCATC+TGG | 0.421417 | 6.4:-20492453 | None:intergenic |
| CAGCATCTTGATAAATTTCA+CGG | 0.430081 | 6.4:-20493156 | None:intergenic |
| GAAAGCATTACTGTTGACTT+TGG | 0.433046 | 6.4:+20491930 | MS.gene81472:CDS |
| CAAAGGCATATTTGCGCAAA+GGG | 0.436250 | 6.4:+20490484 | MS.gene81472:CDS |
| GAGAAAGATGAAAACCTTGA+TGG | 0.440195 | 6.4:+20493109 | MS.gene81472:CDS |
| GGTCTCTTTGTTGAATTCTA+GGG | 0.445923 | 6.4:-20492528 | None:intergenic |
| GCGTAGAATTCAGGTTTAAG+AGG | 0.446014 | 6.4:-20488570 | None:intergenic |
| ATGGCATGGAGTTGAAGAAA+TGG | 0.454175 | 6.4:+20493705 | MS.gene81472:CDS |
| GAACAGTGCTGTCTACAAAC+TGG | 0.455830 | 6.4:+20493642 | MS.gene81472:CDS |
| CTCAAAGTGATCTTCAACAA+AGG | 0.460457 | 6.4:-20488508 | None:intergenic |
| GTTGTAACCATATTTGCAAA+GGG | 0.471848 | 6.4:+20491897 | MS.gene81472:CDS |
| GAAGTGGTTGAGTTTGATAT+GGG | 0.493240 | 6.4:-20488607 | None:intergenic |
| TGTTGAAGATCACTTTGAGT+TGG | 0.493644 | 6.4:+20488512 | MS.gene81472:CDS |
| GGCTTAGCAACCACCACTAT+CGG | 0.497493 | 6.4:-20491460 | None:intergenic |
| ATCAAACTCAACCACTTCAC+TGG | 0.500406 | 6.4:+20488612 | MS.gene81472:CDS |
| TTACCTGCAGCAATAGCCTT+AGG | 0.503378 | 6.4:-20492560 | None:intergenic |
| CTAAAGCTGAATCTATTCAC+TGG | 0.510738 | 6.4:+20492501 | MS.gene81472:CDS |
| TCAAAATCGCTTGTTTGGAA+AGG | 0.513107 | 6.4:+20492136 | MS.gene81472:CDS |
| AAAACGTATGCATCTTCTCC+AGG | 0.513603 | 6.4:-20492113 | None:intergenic |
| AGAGACCACAATTGCACCTA+AGG | 0.514993 | 6.4:+20492544 | MS.gene81472:CDS |
| GTCTACAAACTGGAAGGAAG+TGG | 0.515802 | 6.4:+20493652 | MS.gene81472:CDS |
| TTACCAGAAACCTGAAGAAG+TGG | 0.519527 | 6.4:+20491875 | MS.gene81472:CDS |
| TGAAGTTGGATCCTGTGTTG+TGG | 0.520693 | 6.4:-20491404 | None:intergenic |
| TTTAAGAGGGTCAAGAGTAA+TGG | 0.521953 | 6.4:-20488556 | None:intergenic |
| GCACCTAAGGCTATTGCTGC+AGG | 0.522744 | 6.4:+20492557 | MS.gene81472:CDS |
| TGGCATGGAGTTGAAGAAAT+GGG | 0.527009 | 6.4:+20493706 | MS.gene81472:CDS |
| TCAGGGCAGCATCGCCATCA+AGG | 0.537014 | 6.4:-20493123 | None:intergenic |
| TCTTTCAGAGGAGCCGATAG+TGG | 0.537695 | 6.4:+20491447 | MS.gene81472:CDS |
| AGTGTCAACATTGATGTCCC+TGG | 0.537929 | 6.4:+20492095 | MS.gene81472:CDS |
| GTTGAATCCTTCTCTATCAA+AGG | 0.539634 | 6.4:+20490467 | MS.gene81472:CDS |
| TGAGGCTCAAGTTAAGAAAG+AGG | 0.544908 | 6.4:+20493008 | MS.gene81472:CDS |
| GTGGGAACAAAGAAGGTGGA+AGG | 0.546534 | 6.4:+20493671 | MS.gene81472:CDS |
| GGAAGTGGGAACAAAGAAGG+TGG | 0.550429 | 6.4:+20493667 | MS.gene81472:CDS |
| AAATATGCCTTTGATAGAGA+AGG | 0.551968 | 6.4:-20490474 | None:intergenic |
| GCTAAGACTGCTTTAGAGAC+GGG | 0.554642 | 6.4:+20491090 | MS.gene81472:CDS |
| GAAGGAAGTGGGAACAAAGA+AGG | 0.558246 | 6.4:+20493664 | MS.gene81472:CDS |
| TGCTAAGACTGCTTTAGAGA+CGG | 0.559231 | 6.4:+20491089 | MS.gene81472:CDS |
| AGGAAGTCCTCCAGATGGCA+TGG | 0.561017 | 6.4:+20493691 | MS.gene81472:CDS |
| TGGTTGCTAAGCCTAAATAT+AGG | 0.562078 | 6.4:+20491470 | MS.gene81472:CDS |
| AGATCATACCTTCCAGATGC+CGG | 0.564923 | 6.4:+20492441 | MS.gene81472:intron |
| AATAGCCTTAGGTGCAATTG+TGG | 0.564985 | 6.4:-20492549 | None:intergenic |
| GGTTGTAACCATATTTGCAA+AGG | 0.570551 | 6.4:+20491896 | MS.gene81472:CDS |
| ATCTGATACCGTACCTACAC+AGG | 0.573629 | 6.4:+20491375 | MS.gene81472:CDS |
| TTCAACTCCATGCCATCTGG+AGG | 0.573646 | 6.4:-20493698 | None:intergenic |
| CGTAGAATTCAGGTTTAAGA+GGG | 0.577622 | 6.4:-20488569 | None:intergenic |
| TCAAAGGCATATTTGCGCAA+AGG | 0.585557 | 6.4:+20490483 | MS.gene81472:CDS |
| AAACTGACTCACCAGTGAAG+TGG | 0.588718 | 6.4:-20488623 | None:intergenic |
| CAATGCGTGCATGAAGCTTG+AGG | 0.590690 | 6.4:+20491056 | MS.gene81472:CDS |
| CGGGTAAGTGGGTCTTTGAG+TGG | 0.593553 | 6.4:-20492950 | None:intergenic |
| TGTTTGCAGGTGGAGTCGAA+TGG | 0.595729 | 6.4:+20493620 | MS.gene81472:intron |
| TGATTTGTCTGCAGCCAATG+AGG | 0.596085 | 6.4:-20491115 | None:intergenic |
| ACTTCATACCGGCATCTGGA+AGG | 0.598891 | 6.4:-20492449 | None:intergenic |
| TGTAACCATATTTGCAAAGG+GGG | 0.599430 | 6.4:+20491899 | MS.gene81472:CDS |
| TGGTGGACAAGACTTCATAC+CGG | 0.608923 | 6.4:-20492460 | None:intergenic |
| TTCAGAGGAGCCGATAGTGG+TGG | 0.617870 | 6.4:+20491450 | MS.gene81472:CDS |
| TCTACAAACTGGAAGGAAGT+GGG | 0.621778 | 6.4:+20493653 | MS.gene81472:CDS |
| AAACGTATGCATCTTCTCCA+GGG | 0.628412 | 6.4:-20492112 | None:intergenic |
| AATTTATCAAGATGCTGATG+AGG | 0.632409 | 6.4:+20493162 | MS.gene81472:CDS |
| AACAGATTGGGATAAGCTTG+AGG | 0.633465 | 6.4:+20492990 | MS.gene81472:CDS |
| TCAGCCAGAAGATCTTTCAG+AGG | 0.640486 | 6.4:+20491435 | MS.gene81472:CDS |
| AGTGCTGTCTACAAACTGGA+AGG | 0.650530 | 6.4:+20493646 | MS.gene81472:CDS |
| AAGCTGAATCTATTCACTGG+AGG | 0.652918 | 6.4:+20492504 | MS.gene81472:CDS |
| GTGGAAGGAAGTCCTCCAGA+TGG | 0.656890 | 6.4:+20493686 | MS.gene81472:CDS |
| ACAGGAAAAGTCCACAACAC+AGG | 0.661521 | 6.4:+20491393 | MS.gene81472:CDS |
| TTGTAACCATATTTGCAAAG+GGG | 0.699137 | 6.4:+20491898 | MS.gene81472:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAATAAAGGTAAAAT+AGG | - | chr6.4:20489660-20489679 | None:intergenic | 10.0% |
| !! | ATTAGAGTAAATTATAATAA+AGG | - | chr6.4:20489669-20489688 | None:intergenic | 10.0% |
| !! | TAAATAAGTTTAATATTAGT+CGG | + | chr6.4:20489768-20489787 | MS.gene81472:intron | 10.0% |
| !! | TTAAAATGTAAATACATTAT+TGG | - | chr6.4:20489839-20489858 | None:intergenic | 10.0% |
| !!! | AAACTAATTTAAATTGATTT+TGG | + | chr6.4:20490840-20490859 | MS.gene81472:intron | 10.0% |
| !!! | AACATAATCTAAATATTTTA+AGG | + | chr6.4:20493327-20493346 | MS.gene81472:intron | 10.0% |
| !!! | ATAATGTATTTACATTTTAA+TGG | + | chr6.4:20489839-20489858 | MS.gene81472:intron | 10.0% |
| !!! | CTTTTTATTATTTACTTTTT+TGG | + | chr6.4:20491209-20491228 | MS.gene81472:intron | 10.0% |
| !!! | TTATAATGATTTACTAATTT+TGG | + | chr6.4:20490386-20490405 | MS.gene81472:intron | 10.0% |
| !!! | TTCCAATTTTTTTTTTTTTT+TGG | + | chr6.4:20491030-20491049 | MS.gene81472:intron | 10.0% |
| !! | ATTGATAAAAAACAAACAAA+AGG | - | chr6.4:20488696-20488715 | None:intergenic | 15.0% |
| !! | GAAAAACAAATTAAGAAATT+TGG | - | chr6.4:20491013-20491032 | None:intergenic | 15.0% |
| !! | TAAATAATGATGAACATTAA+GGG | - | chr6.4:20492876-20492895 | None:intergenic | 15.0% |
| !! | TATACTAAAAAAATTGTGTA+TGG | + | chr6.4:20492234-20492253 | MS.gene81472:intron | 15.0% |
| !! | TGCCAAAAAAAAAAAAAAAT+TGG | - | chr6.4:20491035-20491054 | None:intergenic | 15.0% |
| !! | TGTTAATTTAGTATCTAATT+GGG | + | chr6.4:20491754-20491773 | MS.gene81472:intron | 15.0% |
| !! | TTAAATTCACTTCTTATAAT+AGG | + | chr6.4:20489880-20489899 | MS.gene81472:intron | 15.0% |
| !! | TTAAGGACTAAAATAAAAAT+GGG | + | chr6.4:20493344-20493363 | MS.gene81472:intron | 15.0% |
| !! | TTGATAAAAAACAAACAAAA+GGG | - | chr6.4:20488695-20488714 | None:intergenic | 15.0% |
| !! | TTGTTAATTTAGTATCTAAT+TGG | + | chr6.4:20491753-20491772 | MS.gene81472:intron | 15.0% |
| !! | TTTAAGGACTAAAATAAAAA+TGG | + | chr6.4:20493343-20493362 | MS.gene81472:intron | 15.0% |
| !!! | AAAATTAAAGTTTGTTCAAT+TGG | + | chr6.4:20489187-20489206 | MS.gene81472:intron | 15.0% |
| !!! | AAATTAAAGTTTGTTCAATT+GGG | + | chr6.4:20489188-20489207 | MS.gene81472:intron | 15.0% |
| !!! | AGTAAAAGTTTTTTTAATAC+AGG | + | chr6.4:20489718-20489737 | MS.gene81472:intron | 15.0% |
| !!! | ATTTTGAATTTCCAATAAAA+AGG | - | chr6.4:20492345-20492364 | None:intergenic | 15.0% |
| !!! | TAAATTATTATTAAGAGTGT+CGG | - | chr6.4:20489447-20489466 | None:intergenic | 15.0% |
| !!! | TGCATTTTTCTTTAAAAAAA+AGG | + | chr6.4:20489572-20489591 | MS.gene81472:intron | 15.0% |
| !!! | TTTTTCTTTAAAAAAAAGGT+TGG | + | chr6.4:20489576-20489595 | MS.gene81472:intron | 15.0% |
| !! | AAACATCACATGTATTAAAA+AGG | - | chr6.4:20492740-20492759 | None:intergenic | 20.0% |
| !! | AAACTTTACAACAAAAGAAA+AGG | - | chr6.4:20488658-20488677 | None:intergenic | 20.0% |
| !! | AAATAATGATGAACATTAAG+GGG | - | chr6.4:20492875-20492894 | None:intergenic | 20.0% |
| !! | AACAGAAAATCAAAAAGTTT+AGG | - | chr6.4:20492068-20492087 | None:intergenic | 20.0% |
| !! | AACTTTACAACAAAAGAAAA+GGG | - | chr6.4:20488657-20488676 | None:intergenic | 20.0% |
| !! | AATAAAAAATCTGACTTCAA+GGG | - | chr6.4:20493495-20493514 | None:intergenic | 20.0% |
| !! | AATAACAAAGTCTATCATTA+TGG | + | chr6.4:20489334-20489353 | MS.gene81472:intron | 20.0% |
| !! | AATGCTAAAGTAAAACATAA+GGG | - | chr6.4:20492373-20492392 | None:intergenic | 20.0% |
| !! | AATTTAACCATGCATTTATT+TGG | - | chr6.4:20489867-20489886 | None:intergenic | 20.0% |
| !! | ACAGAAAATCAAAAAGTTTA+GGG | - | chr6.4:20492067-20492086 | None:intergenic | 20.0% |
| !! | ATTAAAATTAACCCTTAACA+TGG | + | chr6.4:20492912-20492931 | MS.gene81472:intron | 20.0% |
| !! | ATTATTAGTATAAGGTTTGT+AGG | + | chr6.4:20490143-20490162 | MS.gene81472:intron | 20.0% |
| !! | GTAAATAATGATGAACATTA+AGG | - | chr6.4:20492877-20492896 | None:intergenic | 20.0% |
| !! | GTTAATTTAGTATCTAATTG+GGG | + | chr6.4:20491755-20491774 | MS.gene81472:intron | 20.0% |
| !! | TAATAAAAAATCTGACTTCA+AGG | - | chr6.4:20493496-20493515 | None:intergenic | 20.0% |
| !! | TACAAACCTTATACTAATAA+TGG | - | chr6.4:20490144-20490163 | None:intergenic | 20.0% |
| !! | TATTTATTATTCATACGTGT+GGG | + | chr6.4:20490270-20490289 | MS.gene81472:intron | 20.0% |
| !! | TTATTCGAAATCTCATTAAA+AGG | + | chr6.4:20491683-20491702 | MS.gene81472:intron | 20.0% |
| !! | TTATTTATTATTCATACGTG+TGG | + | chr6.4:20490269-20490288 | MS.gene81472:intron | 20.0% |
| !! | TTCATACAAAACAAACAAAA+GGG | - | chr6.4:20488886-20488905 | None:intergenic | 20.0% |
| !! | TTGAGTGTAATTATATGTTT+CGG | + | chr6.4:20489481-20489500 | MS.gene81472:intron | 20.0% |
| !! | TTTCTATTTACACTTTAACT+TGG | + | chr6.4:20492007-20492026 | MS.gene81472:intron | 20.0% |
| !!! | AATAGTACAAAAGTATCATA+CGG | - | chr6.4:20491801-20491820 | None:intergenic | 20.0% |
| !!! | ACAGATAGTTCTTTTAATTT+TGG | + | chr6.4:20492273-20492292 | MS.gene81472:intron | 20.0% |
| !!! | ATTGTTGATTTTTCTAACTT+AGG | + | chr6.4:20490711-20490730 | MS.gene81472:intron | 20.0% |
| !!! | TAAAAAGTGTTTTCAACAAA+AGG | - | chr6.4:20491196-20491215 | None:intergenic | 20.0% |
| !!! | TATTAATTTTTTTACCAGTC+AGG | + | chr6.4:20493511-20493530 | MS.gene81472:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | chr6.4:20489016-20489035 | MS.gene81472:intron | 20.0% |
| ! | AAAACCAAAAAGAACAGATT+GGG | + | chr6.4:20492978-20492997 | MS.gene81472:CDS | 25.0% |
| ! | AAACTTAAACTCTAGTCAAT+AGG | + | chr6.4:20489276-20489295 | MS.gene81472:intron | 25.0% |
| ! | AAATAAGCATAGCAAACAAA+AGG | - | chr6.4:20490255-20490274 | None:intergenic | 25.0% |
| ! | AACTTAAACTCTAGTCAATA+GGG | + | chr6.4:20489277-20489296 | MS.gene81472:intron | 25.0% |
| ! | AGATAATAATCTGTGAAACA+TGG | - | chr6.4:20489089-20489108 | None:intergenic | 25.0% |
| ! | ATAAAAATGGGTATGGTATA+AGG | + | chr6.4:20493356-20493375 | MS.gene81472:intron | 25.0% |
| ! | CAAACAAAATTAAAACGACA+TGG | - | chr6.4:20493606-20493625 | None:intergenic | 25.0% |
| ! | CAATACAGAAACAAACAAAA+GGG | - | chr6.4:20488833-20488852 | None:intergenic | 25.0% |
| ! | CAATGCTAAAGTAAAACATA+AGG | - | chr6.4:20492374-20492393 | None:intergenic | 25.0% |
| ! | CTGTATTAAATAGCATATAC+TGG | + | chr6.4:20490040-20490059 | MS.gene81472:intron | 25.0% |
| ! | CTTTGTAACAAAAACTTTCA+AGG | + | chr6.4:20493433-20493452 | MS.gene81472:intron | 25.0% |
| ! | GAACGTTATATACACAAAAT+AGG | - | chr6.4:20489623-20489642 | None:intergenic | 25.0% |
| ! | GACTAAAATAAAAATGGGTA+TGG | + | chr6.4:20493349-20493368 | MS.gene81472:intron | 25.0% |
| ! | GACTCAACAAACAAAAATAT+TGG | - | chr6.4:20493275-20493294 | None:intergenic | 25.0% |
| ! | GGGTCATAAAAAAAATCAAA+AGG | - | chr6.4:20488813-20488832 | None:intergenic | 25.0% |
| ! | GTTCATACAAAACAAACAAA+AGG | - | chr6.4:20488887-20488906 | None:intergenic | 25.0% |
| ! | TATTAGCGTGATTGAAATTA+TGG | + | chr6.4:20492846-20492865 | MS.gene81472:intron | 25.0% |
| ! | TCAATACAGAAACAAACAAA+AGG | - | chr6.4:20488834-20488853 | None:intergenic | 25.0% |
| ! | TCATATATGTGTAATAAGCT+TGG | + | chr6.4:20492174-20492193 | MS.gene81472:intron | 25.0% |
| ! | TCTGAAAATTAGATGTTACA+AGG | + | chr6.4:20490878-20490897 | MS.gene81472:intron | 25.0% |
| ! | TGAACAAAAGTCAAGAAATT+TGG | - | chr6.4:20490415-20490434 | None:intergenic | 25.0% |
| ! | TTCTGTTATTGCAAATGTTT+CGG | + | chr6.4:20490326-20490345 | MS.gene81472:intron | 25.0% |
| ! | TTGTAGATTGAAGAAAATAG+CGG | + | chr6.4:20489963-20489982 | MS.gene81472:intron | 25.0% |
| ! | TTTCAATCACGCTAATAATT+TGG | - | chr6.4:20492843-20492862 | None:intergenic | 25.0% |
| !! | AAATGTGGATAATTCACTTT+TGG | + | chr6.4:20491304-20491323 | MS.gene81472:intron | 25.0% |
| !! | AAATTTGGTAACTACATCAT+GGG | - | chr6.4:20490998-20491017 | None:intergenic | 25.0% |
| !! | AATTAAAACGACATGGTTTT+CGG | - | chr6.4:20493599-20493618 | None:intergenic | 25.0% |
| !! | ATATTAGTCATTGGCTAAAT+TGG | + | chr6.4:20493545-20493564 | MS.gene81472:intron | 25.0% |
| !! | CGAATAATGATTTGAACTTT+TGG | - | chr6.4:20491670-20491689 | None:intergenic | 25.0% |
| !! | GAATTCTTTTCAAAGCATAA+GGG | + | chr6.4:20491567-20491586 | MS.gene81472:intron | 25.0% |
| !! | TGAAAGTTTTTGTTACAAAG+TGG | - | chr6.4:20493433-20493452 | None:intergenic | 25.0% |
| !! | TGAATTCTTTTCAAAGCATA+AGG | + | chr6.4:20491566-20491585 | MS.gene81472:intron | 25.0% |
| !! | TTAAGTTTTCGTCAAAAACT+TGG | - | chr6.4:20488912-20488931 | None:intergenic | 25.0% |
| !! | TTCTAAACATTTGTCATTTC+AGG | + | chr6.4:20493087-20493106 | MS.gene81472:intron | 25.0% |
| !!! | AAAAGTATCATACGGAATAA+TGG | - | chr6.4:20491793-20491812 | None:intergenic | 25.0% |
| !!! | AAGAACTGAAATTTTTTTGC+AGG | - | chr6.4:20493045-20493064 | None:intergenic | 25.0% |
| !!! | ACTTACAAATGACTTTTTCA+TGG | - | chr6.4:20493200-20493219 | None:intergenic | 25.0% |
| !!! | CAGCTTTTTTATTGTTTGTT+TGG | + | chr6.4:20491499-20491518 | MS.gene81472:intron | 25.0% |
| !!! | TATAAGCTTTTGATAACACA+TGG | - | chr6.4:20490618-20490637 | None:intergenic | 25.0% |
| !!! | TTTAACTTGGTTTAACAAGT+TGG | + | chr6.4:20492020-20492039 | MS.gene81472:intron | 25.0% |
| AAACTGCAACTTTGTTCAAT+TGG | + | chr6.4:20488734-20488753 | MS.gene81472:intron | 30.0% | |
| AAATATGCCTTTGATAGAGA+AGG | - | chr6.4:20490477-20490496 | None:intergenic | 30.0% | |
| AACACGCCATTATTAGTATA+AGG | + | chr6.4:20490135-20490154 | MS.gene81472:intron | 30.0% | |
| AACTGCAAAATCCATGTTAA+GGG | - | chr6.4:20492926-20492945 | None:intergenic | 30.0% | |
| AACTGCAACTTTGTTCAATT+GGG | + | chr6.4:20488735-20488754 | MS.gene81472:intron | 30.0% | |
| AATGGATCCAAATAAATGCA+TGG | + | chr6.4:20489857-20489876 | MS.gene81472:intron | 30.0% | |
| AATTTATCAAGATGCTGATG+AGG | + | chr6.4:20493162-20493181 | MS.gene81472:CDS | 30.0% | |
| ACATTATTGGTAAGAATCTC+AGG | - | chr6.4:20489826-20489845 | None:intergenic | 30.0% | |
| ACTTTGGTGAACAAATTGTA+TGG | + | chr6.4:20491946-20491965 | MS.gene81472:intron | 30.0% | |
| AGAATATGTAGGAAGAAGAA+AGG | - | chr6.4:20490535-20490554 | None:intergenic | 30.0% | |
| AGATGTTACAAGGTTATTTG+CGG | + | chr6.4:20490888-20490907 | MS.gene81472:intron | 30.0% | |
| AGCTGTACTAACCTATATTT+AGG | - | chr6.4:20491484-20491503 | None:intergenic | 30.0% | |
| CAAAACCAAAAAGAACAGAT+TGG | + | chr6.4:20492977-20492996 | MS.gene81472:CDS | 30.0% | |
| CACTTTCTTATATTTGATCC+TGG | + | chr6.4:20493235-20493254 | MS.gene81472:intron | 30.0% | |
| CAGCATCTTGATAAATTTCA+CGG | - | chr6.4:20493159-20493178 | None:intergenic | 30.0% | |
| CATGGCAATAACATTATTTC+AGG | - | chr6.4:20490600-20490619 | None:intergenic | 30.0% | |
| CCAATAAAAAGGATTGAAAC+AGG | - | chr6.4:20492334-20492353 | None:intergenic | 30.0% | |
| CTATGAATGTGTAAACTACA+GGG | + | chr6.4:20493296-20493315 | MS.gene81472:intron | 30.0% | |
| CTATTGTATGAATGTTGATG+TGG | + | chr6.4:20489796-20489815 | MS.gene81472:intron | 30.0% | |
| CTGTATAATATGTTAACCTG+TGG | + | chr6.4:20492404-20492423 | MS.gene81472:intron | 30.0% | |
| CTTCGACAAATATTAGTCAT+TGG | + | chr6.4:20493536-20493555 | MS.gene81472:intron | 30.0% | |
| GAACAAGAGAATTTGCATAA+CGG | - | chr6.4:20490089-20490108 | None:intergenic | 30.0% | |
| GAATAGTTAGTACATGACAT+TGG | - | chr6.4:20491648-20491667 | None:intergenic | 30.0% | |
| GAATATGTAGGAAGAAGAAA+GGG | - | chr6.4:20490534-20490553 | None:intergenic | 30.0% | |
| GCAACAATTACAGAATATGT+AGG | - | chr6.4:20490546-20490565 | None:intergenic | 30.0% | |
| GTCAAAAACTTGGAACAAAA+GGG | - | chr6.4:20489254-20489273 | None:intergenic | 30.0% | |
| GTTGTAACCATATTTGCAAA+GGG | + | chr6.4:20491897-20491916 | MS.gene81472:CDS | 30.0% | |
| TAACTGCAAAATCCATGTTA+AGG | - | chr6.4:20492927-20492946 | None:intergenic | 30.0% | |
| TATAAGCGTAAAAATGCTGA+GGG | - | chr6.4:20491729-20491748 | None:intergenic | 30.0% | |
| TATACAAAACCTATGAAGCA+CGG | - | chr6.4:20489545-20489564 | None:intergenic | 30.0% | |
| TATATTTGATCCTGGCTATA+TGG | + | chr6.4:20493243-20493262 | MS.gene81472:intron | 30.0% | |
| TATCTAATTGGGGAAAAGTT+TGG | + | chr6.4:20491765-20491784 | MS.gene81472:intron | 30.0% | |
| TCTATGAATGTGTAAACTAC+AGG | + | chr6.4:20493295-20493314 | MS.gene81472:intron | 30.0% | |
| TGCATTGTATGTGCTATATT+TGG | - | chr6.4:20492668-20492687 | None:intergenic | 30.0% | |
| TTATCAATAACCGCAAAAAC+TGG | + | chr6.4:20488708-20488727 | MS.gene81472:intron | 30.0% | |
| TTGTAACCATATTTGCAAAG+GGG | + | chr6.4:20491898-20491917 | MS.gene81472:CDS | 30.0% | |
| ! | AAGACGAATTTCAATTTTGG+TGG | - | chr6.4:20492480-20492499 | None:intergenic | 30.0% |
| ! | AGCAAGACGAATTTCAATTT+TGG | - | chr6.4:20492483-20492502 | None:intergenic | 30.0% |
| ! | CCTGTTTCAATCCTTTTTAT+TGG | + | chr6.4:20492331-20492350 | MS.gene81472:intron | 30.0% |
| ! | GAAATTTGGTAACTACATCA+TGG | - | chr6.4:20490999-20491018 | None:intergenic | 30.0% |
| ! | TTATCCCAATCTGTTCTTTT+TGG | - | chr6.4:20492985-20493004 | None:intergenic | 30.0% |
| ! | TTCACGGAAAAATTTGTTCA+GGG | - | chr6.4:20493143-20493162 | None:intergenic | 30.0% |
| ! | TTGTTTGGAAAGGTATGAAT+GGG | + | chr6.4:20492146-20492165 | MS.gene81472:intron | 30.0% |
| ! | TTTCACGGAAAAATTTGTTC+AGG | - | chr6.4:20493144-20493163 | None:intergenic | 30.0% |
| ! | TTTTGCTTTCACTTCAAGAT+CGG | - | chr6.4:20488484-20488503 | None:intergenic | 30.0% |
| !! | GTTTTTCAAAATCGCTTGTT+TGG | + | chr6.4:20492131-20492150 | MS.gene81472:CDS | 30.0% |
| !!! | ATCTGTTCTTTTTGGTTTTG+AGG | - | chr6.4:20492977-20492996 | None:intergenic | 30.0% |
| !!! | ATTTTTTTCCACAGATCAGT+AGG | - | chr6.4:20491841-20491860 | None:intergenic | 30.0% |
| !!! | GTCGTTTTAATTTTGTTTGC+AGG | + | chr6.4:20493607-20493626 | MS.gene81472:intron | 30.0% |
| !!! | GTGATGGTTTTTTGGATTAT+TGG | + | chr6.4:20492816-20492835 | MS.gene81472:intron | 30.0% |
| !!! | GTTTTAATTTTGTTTGCAGG+TGG | + | chr6.4:20493610-20493629 | MS.gene81472:intron | 30.0% |
| !!! | TCAATTTTTAGCATACGTGA+TGG | + | chr6.4:20492690-20492709 | MS.gene81472:intron | 30.0% |
| ACAAAATTCCTACTGATCTG+TGG | + | chr6.4:20491830-20491849 | MS.gene81472:intron | 35.0% | |
| ACTTTCAAGGACCAAAACTT+TGG | + | chr6.4:20493446-20493465 | MS.gene81472:intron | 35.0% | |
| AGAAACAATGTGAATGAACG+AGG | - | chr6.4:20490310-20490329 | None:intergenic | 35.0% | |
| AGATAAAACTCCAAACCACT+TGG | + | chr6.4:20491601-20491620 | MS.gene81472:intron | 35.0% | |
| AGCTTATATGTTCCAGAATG+TGG | + | chr6.4:20490630-20490649 | MS.gene81472:intron | 35.0% | |
| AGTGTAGTTTACAACTGGAT+AGG | + | chr6.4:20492209-20492228 | MS.gene81472:intron | 35.0% | |
| ATTATTCATACGTGTGGGTT+TGG | + | chr6.4:20490275-20490294 | MS.gene81472:intron | 35.0% | |
| ATTGTATCTTGACCGTTGAA+AGG | + | chr6.4:20491279-20491298 | MS.gene81472:intron | 35.0% | |
| CGTCAAAAACTTGGAACAAA+AGG | - | chr6.4:20489255-20489274 | None:intergenic | 35.0% | |
| CTAAAGCTGAATCTATTCAC+TGG | + | chr6.4:20492501-20492520 | MS.gene81472:CDS | 35.0% | |
| CTCAAAGTGATCTTCAACAA+AGG | - | chr6.4:20488511-20488530 | None:intergenic | 35.0% | |
| CTGTTTGAAGATATAACCAC+AGG | - | chr6.4:20492423-20492442 | None:intergenic | 35.0% | |
| GAAGTGGTTGAGTTTGATAT+GGG | - | chr6.4:20488610-20488629 | None:intergenic | 35.0% | |
| GAGAAAGATGAAAACCTTGA+TGG | + | chr6.4:20493109-20493128 | MS.gene81472:CDS | 35.0% | |
| GATCTGTGGAAAAAAATTGC+AGG | + | chr6.4:20491844-20491863 | MS.gene81472:intron | 35.0% | |
| GGTCTCTTTGTTGAATTCTA+GGG | - | chr6.4:20492531-20492550 | None:intergenic | 35.0% | |
| GGTTGTAACCATATTTGCAA+AGG | + | chr6.4:20491896-20491915 | MS.gene81472:CDS | 35.0% | |
| GTATAAGCGTAAAAATGCTG+AGG | - | chr6.4:20491730-20491749 | None:intergenic | 35.0% | |
| GTTGAATCCTTCTCTATCAA+AGG | + | chr6.4:20490467-20490486 | MS.gene81472:CDS | 35.0% | |
| TAACTACATCATGGGAAAAC+AGG | - | chr6.4:20490990-20491009 | None:intergenic | 35.0% | |
| TAATGATGAACATTAAGGGG+TGG | - | chr6.4:20492872-20492891 | None:intergenic | 35.0% | |
| TCAAAATCGCTTGTTTGGAA+AGG | + | chr6.4:20492136-20492155 | MS.gene81472:CDS | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | + | chr6.4:20489022-20489041 | MS.gene81472:intron | 35.0% | |
| TGAAGTGGTTGAGTTTGATA+TGG | - | chr6.4:20488611-20488630 | None:intergenic | 35.0% | |
| TGGTCTCTTTGTTGAATTCT+AGG | - | chr6.4:20492532-20492551 | None:intergenic | 35.0% | |
| TGGTTGCTAAGCCTAAATAT+AGG | + | chr6.4:20491470-20491489 | MS.gene81472:CDS | 35.0% | |
| TGTAACCATATTTGCAAAGG+GGG | + | chr6.4:20491899-20491918 | MS.gene81472:CDS | 35.0% | |
| TGTTGAAGATCACTTTGAGT+TGG | + | chr6.4:20488512-20488531 | MS.gene81472:CDS | 35.0% | |
| TTCAAAGCATAAGGGTAAAG+TGG | + | chr6.4:20491575-20491594 | MS.gene81472:intron | 35.0% | |
| TTGTATCTTGACCGTTGAAA+GGG | + | chr6.4:20491280-20491299 | MS.gene81472:intron | 35.0% | |
| TTTAAGAGGGTCAAGAGTAA+TGG | - | chr6.4:20488559-20488578 | None:intergenic | 35.0% | |
| TTTATTGTTTGTTTGGACCG+TGG | + | chr6.4:20491506-20491525 | MS.gene81472:intron | 35.0% | |
| ! | ATCCACATTTTCCCTTTCAA+CGG | - | chr6.4:20491294-20491313 | None:intergenic | 35.0% |
| ! | CGTAGAATTCAGGTTTAAGA+GGG | - | chr6.4:20488572-20488591 | None:intergenic | 35.0% |
| ! | CTTGTTTGGAAAGGTATGAA+TGG | + | chr6.4:20492145-20492164 | MS.gene81472:intron | 35.0% |
| ! | GGAAAAGTGTAGTTTACAAC+TGG | + | chr6.4:20492204-20492223 | MS.gene81472:intron | 35.0% |
| ! | TTTTCACTGCAGCTATGTTT+TGG | + | chr6.4:20492601-20492620 | MS.gene81472:intron | 35.0% |
| !! | ACAGAAGTTTGCTAGTATTG+TGG | - | chr6.4:20492777-20492796 | None:intergenic | 35.0% |
| !! | GAAAGCATTACTGTTGACTT+TGG | + | chr6.4:20491930-20491949 | MS.gene81472:CDS | 35.0% |
| !! | GGTATCTGTGATTTTAACGA+AGG | - | chr6.4:20492647-20492666 | None:intergenic | 35.0% |
| !! | TGGATAATTCACTTTTGGCT+AGG | + | chr6.4:20491309-20491328 | MS.gene81472:intron | 35.0% |
| !! | TTGTTTTGTCCTATGAAGCA+CGG | + | chr6.4:20489394-20489413 | MS.gene81472:intron | 35.0% |
| !!! | GTTCTTTTTGGTTTTGAGGA+CGG | - | chr6.4:20492973-20492992 | None:intergenic | 35.0% |
| !!! | TTCTTTTTGGTTTTGAGGAC+GGG | - | chr6.4:20492972-20492991 | None:intergenic | 35.0% |
| AAAACGTATGCATCTTCTCC+AGG | - | chr6.4:20492116-20492135 | None:intergenic | 40.0% | |
| AAACGTATGCATCTTCTCCA+GGG | - | chr6.4:20492115-20492134 | None:intergenic | 40.0% | |
| AACAGATTGGGATAAGCTTG+AGG | + | chr6.4:20492990-20493009 | MS.gene81472:CDS | 40.0% | |
| AACTTTGGTCTGAGTGGAAT+TGG | + | chr6.4:20493461-20493480 | MS.gene81472:intron | 40.0% | |
| AAGCTGAATCTATTCACTGG+AGG | + | chr6.4:20492504-20492523 | MS.gene81472:CDS | 40.0% | |
| ACATCATTGACCAAGTGGTT+TGG | - | chr6.4:20491614-20491633 | None:intergenic | 40.0% | |
| ATCAAACTCAACCACTTCAC+TGG | + | chr6.4:20488612-20488631 | MS.gene81472:CDS | 40.0% | |
| ATGGCATGGAGTTGAAGAAA+TGG | + | chr6.4:20493705-20493724 | MS.gene81472:CDS | 40.0% | |
| ATGGTTACAACCACTTCTTC+AGG | - | chr6.4:20491888-20491907 | None:intergenic | 40.0% | |
| CTAGGAAACTAACTTGAGCT+TGG | + | chr6.4:20491327-20491346 | MS.gene81472:intron | 40.0% | |
| GAAGAAGAAAGGGAAAGACA+AGG | - | chr6.4:20490524-20490543 | None:intergenic | 40.0% | |
| GATATAGCACTGTTGTGTAG+CGG | - | chr6.4:20490001-20490020 | None:intergenic | 40.0% | |
| GTAACTCTGACATTGATGCT+AGG | - | chr6.4:20493577-20493596 | None:intergenic | 40.0% | |
| TATTTGTCGAAGAACCTGAC+TGG | - | chr6.4:20493528-20493547 | None:intergenic | 40.0% | |
| TCTACAAACTGGAAGGAAGT+GGG | + | chr6.4:20493653-20493672 | MS.gene81472:CDS | 40.0% | |
| TGAGGCTCAAGTTAAGAAAG+AGG | + | chr6.4:20493008-20493027 | MS.gene81472:CDS | 40.0% | |
| TGGCATGGAGTTGAAGAAAT+GGG | + | chr6.4:20493706-20493725 | MS.gene81472:CDS | 40.0% | |
| TGTAATAAGCTTGGATCACG+TGG | + | chr6.4:20492183-20492202 | MS.gene81472:intron | 40.0% | |
| TTACCAGAAACCTGAAGAAG+TGG | + | chr6.4:20491875-20491894 | MS.gene81472:CDS | 40.0% | |
| TTGGAGTTGTTTGTGTCTTG+TGG | + | chr6.4:20489595-20489614 | MS.gene81472:intron | 40.0% | |
| TTGGATCATACCATATAGCC+AGG | - | chr6.4:20493256-20493275 | None:intergenic | 40.0% | |
| ! | AATAGCCTTAGGTGCAATTG+TGG | - | chr6.4:20492552-20492571 | None:intergenic | 40.0% |
| ! | CAAAGGCATATTTGCGCAAA+GGG | + | chr6.4:20490484-20490503 | MS.gene81472:CDS | 40.0% |
| ! | GCAGTTTTTGCCAGTTTTTG+CGG | - | chr6.4:20488721-20488740 | None:intergenic | 40.0% |
| ! | GCGTAGAATTCAGGTTTAAG+AGG | - | chr6.4:20488573-20488592 | None:intergenic | 40.0% |
| ! | TCAAAGGCATATTTGCGCAA+AGG | + | chr6.4:20490483-20490502 | MS.gene81472:CDS | 40.0% |
| ! | TTCCACTCAGACCAAAGTTT+TGG | - | chr6.4:20493460-20493479 | None:intergenic | 40.0% |
| !! | CAAAGTTTTGTCACGAGTGA+TGG | + | chr6.4:20492800-20492819 | MS.gene81472:intron | 40.0% |
| !! | TATATGTTTCGGTGTCGTGT+TGG | + | chr6.4:20489492-20489511 | MS.gene81472:intron | 40.0% |
| !! | TCAGTAAATGCGTTCTGAGA+TGG | + | chr6.4:20490796-20490815 | MS.gene81472:intron | 40.0% |
| !! | TGCTAAGACTGCTTTAGAGA+CGG | + | chr6.4:20491089-20491108 | MS.gene81472:CDS | 40.0% |
| !!! | GGCTGAACATCTTTTGAAGT+TGG | - | chr6.4:20491421-20491440 | None:intergenic | 40.0% |
| !!! | TGTCACGAGTGATGGTTTTT+TGG | + | chr6.4:20492808-20492827 | MS.gene81472:intron | 40.0% |
| ACAGGAAAAGTCCACAACAC+AGG | + | chr6.4:20491393-20491412 | MS.gene81472:CDS | 45.0% | |
| AGAGACCACAATTGCACCTA+AGG | + | chr6.4:20492544-20492563 | MS.gene81472:CDS | 45.0% | |
| AGATCATACCTTCCAGATGC+CGG | + | chr6.4:20492441-20492460 | MS.gene81472:intron | 45.0% | |
| AGTGCTGTCTACAAACTGGA+AGG | + | chr6.4:20493646-20493665 | MS.gene81472:CDS | 45.0% | |
| AGTGTCAACATTGATGTCCC+TGG | + | chr6.4:20492095-20492114 | MS.gene81472:CDS | 45.0% | |
| ATCTGATACCGTACCTACAC+AGG | + | chr6.4:20491375-20491394 | MS.gene81472:CDS | 45.0% | |
| ATGGATACAGACACAGTCAC+CGG | - | chr6.4:20489070-20489089 | None:intergenic | 45.0% | |
| ATTGTTTGTTTGGACCGTGG+AGG | + | chr6.4:20491509-20491528 | MS.gene81472:intron | 45.0% | |
| ATTTGCAAAGGGGGTCTCAA+AGG | + | chr6.4:20491908-20491927 | MS.gene81472:CDS | 45.0% | |
| CATGTCTACACATAACCCAC+AGG | - | chr6.4:20490363-20490382 | None:intergenic | 45.0% | |
| CGTCAACATCATTGACCAAG+TGG | - | chr6.4:20491619-20491638 | None:intergenic | 45.0% | |
| CTAAACATTAGCACCCTCCA+CGG | - | chr6.4:20491526-20491545 | None:intergenic | 45.0% | |
| GAACAGTGCTGTCTACAAAC+TGG | + | chr6.4:20493642-20493661 | MS.gene81472:CDS | 45.0% | |
| GAAGAAAGGGAAAGACAAGG+TGG | - | chr6.4:20490521-20490540 | None:intergenic | 45.0% | |
| GAAGGAAGTGGGAACAAAGA+AGG | + | chr6.4:20493664-20493683 | MS.gene81472:CDS | 45.0% | |
| GAATGTGACAAACGCATTGC+AGG | + | chr6.4:20491159-20491178 | MS.gene81472:CDS | 45.0% | |
| GACCAAAACTTTGGTCTGAG+TGG | + | chr6.4:20493455-20493474 | MS.gene81472:intron | 45.0% | |
| GACCGTTGAAAGGGAAAATG+TGG | + | chr6.4:20491289-20491308 | MS.gene81472:intron | 45.0% | |
| GGAAACTAACTTGAGCTTGG+TGG | + | chr6.4:20491330-20491349 | MS.gene81472:intron | 45.0% | |
| GTCTACAAACTGGAAGGAAG+TGG | + | chr6.4:20493652-20493671 | MS.gene81472:CDS | 45.0% | |
| TCAGCCAGAAGATCTTTCAG+AGG | + | chr6.4:20491435-20491454 | MS.gene81472:CDS | 45.0% | |
| TCGGAATGTAACTGTCCTGT+GGG | + | chr6.4:20490345-20490364 | MS.gene81472:intron | 45.0% | |
| TGAAGTTGGATCCTGTGTTG+TGG | - | chr6.4:20491407-20491426 | None:intergenic | 45.0% | |
| TGAGACCCCCTTTGCAAATA+TGG | - | chr6.4:20491907-20491926 | None:intergenic | 45.0% | |
| TTACCTGCAGCAATAGCCTT+AGG | - | chr6.4:20492563-20492582 | None:intergenic | 45.0% | |
| TTCGGAATGTAACTGTCCTG+TGG | + | chr6.4:20490344-20490363 | MS.gene81472:intron | 45.0% | |
| TTCTTCAACTCCATGCCATC+TGG | - | chr6.4:20493704-20493723 | None:intergenic | 45.0% | |
| TTGTTTGTTTGGACCGTGGA+GGG | + | chr6.4:20491510-20491529 | MS.gene81472:intron | 45.0% | |
| ! | AAACTGACTCACCAGTGAAG+TGG | - | chr6.4:20488626-20488645 | None:intergenic | 45.0% |
| ! | CAACCACTTCTTCAGGTTTC+TGG | - | chr6.4:20491881-20491900 | None:intergenic | 45.0% |
| ! | GGACTTTTCCTGTGTAGGTA+CGG | - | chr6.4:20491386-20491405 | None:intergenic | 45.0% |
| ! | GTTCCAGAATGTGGTTCTGT+GGG | + | chr6.4:20490639-20490658 | MS.gene81472:intron | 45.0% |
| ! | GTTGTGGACTTTTCCTGTGT+AGG | - | chr6.4:20491391-20491410 | None:intergenic | 45.0% |
| ! | TGATTTGTCTGCAGCCAATG+AGG | - | chr6.4:20491118-20491137 | None:intergenic | 45.0% |
| ! | TGGTGGACAAGACTTCATAC+CGG | - | chr6.4:20492463-20492482 | None:intergenic | 45.0% |
| ! | TGTTCCAGAATGTGGTTCTG+TGG | + | chr6.4:20490638-20490657 | MS.gene81472:intron | 45.0% |
| ! | TTCCAGAATGTGGTTCTGTG+GGG | + | chr6.4:20490640-20490659 | MS.gene81472:intron | 45.0% |
| !! | GCTAAGACTGCTTTAGAGAC+GGG | + | chr6.4:20491090-20491109 | MS.gene81472:CDS | 45.0% |
| !! | TATTAAGAGTGTCGGCGTGT+CGG | - | chr6.4:20489439-20489458 | None:intergenic | 45.0% |
| ACACGTCTAACCCTAACCCA+AGG | - | chr6.4:20488961-20488980 | None:intergenic | 50.0% | |
| ACTTCATACCGGCATCTGGA+AGG | - | chr6.4:20492452-20492471 | None:intergenic | 50.0% | |
| ATGAAGCCCAGACACTCCTT+GGG | + | chr6.4:20488942-20488961 | MS.gene81472:intron | 50.0% | |
| CAAGACTTCATACCGGCATC+TGG | - | chr6.4:20492456-20492475 | None:intergenic | 50.0% | |
| CAATGCGTGCATGAAGCTTG+AGG | + | chr6.4:20491056-20491075 | MS.gene81472:CDS | 50.0% | |
| GCACGATCAGCGTAGAATTC+AGG | - | chr6.4:20488582-20488601 | None:intergenic | 50.0% | |
| GGAAGTGGGAACAAAGAAGG+TGG | + | chr6.4:20493667-20493686 | MS.gene81472:CDS | 50.0% | |
| GGCTTAGCAACCACCACTAT+CGG | - | chr6.4:20491463-20491482 | None:intergenic | 50.0% | |
| GGTCTGAGTGGAATTGGACT+CGG | + | chr6.4:20493467-20493486 | MS.gene81472:intron | 50.0% | |
| GTGGGAACAAAGAAGGTGGA+AGG | + | chr6.4:20493671-20493690 | MS.gene81472:CDS | 50.0% | |
| TATGAAGCCCAGACACTCCT+TGG | + | chr6.4:20488941-20488960 | MS.gene81472:intron | 50.0% | |
| TCTTTCAGAGGAGCCGATAG+TGG | + | chr6.4:20491447-20491466 | MS.gene81472:CDS | 50.0% | |
| TGTCCTATGAAGCACGGATG+CGG | + | chr6.4:20489400-20489419 | MS.gene81472:intron | 50.0% | |
| TGTTTGCAGGTGGAGTCGAA+TGG | + | chr6.4:20493620-20493639 | MS.gene81472:intron | 50.0% | |
| TTCAACTCCATGCCATCTGG+AGG | - | chr6.4:20493701-20493720 | None:intergenic | 50.0% | |
| TTTAGAGACGGGTGCCTCAT+TGG | + | chr6.4:20491101-20491120 | MS.gene81472:CDS | 50.0% | |
| ! | GGCTCCTCTGAAAGATCTTC+TGG | - | chr6.4:20491442-20491461 | None:intergenic | 50.0% |
| !! | CGTGGAGGGTGCTAATGTTT+AGG | + | chr6.4:20491524-20491543 | MS.gene81472:intron | 50.0% |
| !! | GAAGAGTGTCCGTGCTTCAT+AGG | + | chr6.4:20489533-20489552 | MS.gene81472:intron | 50.0% |
| !! | TTTCGGTGTCGTGTTGGTGT+TGG | + | chr6.4:20489498-20489517 | MS.gene81472:intron | 50.0% |
| !!! | GGTTTTGAGGACGGGTAAGT+GGG | - | chr6.4:20492964-20492983 | None:intergenic | 50.0% |
| !!! | TGGTTTTGAGGACGGGTAAG+TGG | - | chr6.4:20492965-20492984 | None:intergenic | 50.0% |
| AGCCCCACAGAACCACATTC+TGG | - | chr6.4:20490645-20490664 | None:intergenic | 55.0% | |
| AGGAAGTCCTCCAGATGGCA+TGG | + | chr6.4:20493691-20493710 | MS.gene81472:CDS | 55.0% | |
| CCCAGACACTCCTTGGGTTA+GGG | + | chr6.4:20488948-20488967 | MS.gene81472:intron | 55.0% | |
| CGGGTAAGTGGGTCTTTGAG+TGG | - | chr6.4:20492953-20492972 | None:intergenic | 55.0% | |
| GCACCTAAGGCTATTGCTGC+AGG | + | chr6.4:20492557-20492576 | MS.gene81472:CDS | 55.0% | |
| GTCACTGTCAGTGTCGTGTC+CGG | + | chr6.4:20489048-20489067 | MS.gene81472:intron | 55.0% | |
| GTGGAAGGAAGTCCTCCAGA+TGG | + | chr6.4:20493686-20493705 | MS.gene81472:CDS | 55.0% | |
| TGTCCGCATCCGTGCTTCAT+AGG | - | chr6.4:20489406-20489425 | None:intergenic | 55.0% | |
| ! | AGAATGTGGTTCTGTGGGGC+TGG | + | chr6.4:20490644-20490663 | MS.gene81472:intron | 55.0% |
| ! | TTCAGAGGAGCCGATAGTGG+TGG | + | chr6.4:20491450-20491469 | MS.gene81472:CDS | 55.0% |
| !! | ACCCTAACCCAAGGAGTGTC+TGG | - | chr6.4:20488952-20488971 | None:intergenic | 55.0% |
| !! | CCCTAACCCAAGGAGTGTCT+GGG | - | chr6.4:20488951-20488970 | None:intergenic | 55.0% |
| GCCCAGACACTCCTTGGGTT+AGG | + | chr6.4:20488947-20488966 | MS.gene81472:intron | 60.0% | |
| TCAGGGCAGCATCGCCATCA+AGG | - | chr6.4:20493126-20493145 | None:intergenic | 60.0% | |
| TGAAGCACGGATGCGGACAC+CGG | + | chr6.4:20489407-20489426 | MS.gene81472:intron | 60.0% | |
| !! | GTCGGCGTGTCGGTTGTGTC+CGG | - | chr6.4:20489429-20489448 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 20488474 | 20493736 | 20488474 | ID=MS.gene81472 |
| chr6.4 | mRNA | 20488474 | 20493736 | 20488474 | ID=MS.gene81472.t1;Parent=MS.gene81472 |
| chr6.4 | exon | 20488474 | 20488633 | 20488474 | ID=MS.gene81472.t1.exon1;Parent=MS.gene81472.t1 |
| chr6.4 | CDS | 20488474 | 20488633 | 20488474 | ID=cds.MS.gene81472.t1;Parent=MS.gene81472.t1 |
| chr6.4 | exon | 20490436 | 20490505 | 20490436 | ID=MS.gene81472.t1.exon2;Parent=MS.gene81472.t1 |
| chr6.4 | CDS | 20490436 | 20490505 | 20490436 | ID=cds.MS.gene81472.t1;Parent=MS.gene81472.t1 |
| chr6.4 | exon | 20491056 | 20491180 | 20491056 | ID=MS.gene81472.t1.exon3;Parent=MS.gene81472.t1 |
| chr6.4 | CDS | 20491056 | 20491180 | 20491056 | ID=cds.MS.gene81472.t1;Parent=MS.gene81472.t1 |
| chr6.4 | exon | 20491371 | 20491491 | 20491371 | ID=MS.gene81472.t1.exon4;Parent=MS.gene81472.t1 |
| chr6.4 | CDS | 20491371 | 20491491 | 20491371 | ID=cds.MS.gene81472.t1;Parent=MS.gene81472.t1 |
| chr6.4 | exon | 20491866 | 20491962 | 20491866 | ID=MS.gene81472.t1.exon5;Parent=MS.gene81472.t1 |
| chr6.4 | CDS | 20491866 | 20491962 | 20491866 | ID=cds.MS.gene81472.t1;Parent=MS.gene81472.t1 |
| chr6.4 | exon | 20492092 | 20492157 | 20492092 | ID=MS.gene81472.t1.exon6;Parent=MS.gene81472.t1 |
| chr6.4 | CDS | 20492092 | 20492157 | 20492092 | ID=cds.MS.gene81472.t1;Parent=MS.gene81472.t1 |
| chr6.4 | exon | 20492443 | 20492578 | 20492443 | ID=MS.gene81472.t1.exon7;Parent=MS.gene81472.t1 |
| chr6.4 | CDS | 20492443 | 20492578 | 20492443 | ID=cds.MS.gene81472.t1;Parent=MS.gene81472.t1 |
| chr6.4 | exon | 20492944 | 20493029 | 20492944 | ID=MS.gene81472.t1.exon8;Parent=MS.gene81472.t1 |
| chr6.4 | CDS | 20492944 | 20493029 | 20492944 | ID=cds.MS.gene81472.t1;Parent=MS.gene81472.t1 |
| chr6.4 | exon | 20493109 | 20493213 | 20493109 | ID=MS.gene81472.t1.exon9;Parent=MS.gene81472.t1 |
| chr6.4 | CDS | 20493109 | 20493213 | 20493109 | ID=cds.MS.gene81472.t1;Parent=MS.gene81472.t1 |
| chr6.4 | exon | 20493629 | 20493736 | 20493629 | ID=MS.gene81472.t1.exon10;Parent=MS.gene81472.t1 |
| chr6.4 | CDS | 20493629 | 20493736 | 20493629 | ID=cds.MS.gene81472.t1;Parent=MS.gene81472.t1 |
| Gene Sequence |
| Protein sequence |
