Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025171.t1 | XP_013463468.2 | 98 | 205 | 2 | 2 | 1 | 203 | 1 | 205 | 1.90E-111 | 411.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025171.t1 | Q94AF0 | 67.6 | 210 | 61 | 3 | 1 | 203 | 13 | 222 | 1.6e-79 | 297.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025171.t1 | I3S2Y5 | 98.0 | 205 | 2 | 2 | 1 | 203 | 1 | 205 | 1.4e-111 | 411.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025171 | MS.gene41420 | PPI |
| MS.gene025171 | MS.gene006308 | PPI |
| MS.gene025171 | MS.gene34479 | PPI |
| MS.gene025171 | MS.gene49076 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025171.t1 | MTR_2g040570 | 97.436 | 117 | 1 | 2 | 1 | 115 | 1 | 117 | 6.08e-78 | 230 |
| MS.gene025171.t1 | MTR_1g100673 | 54.688 | 192 | 81 | 2 | 16 | 201 | 7 | 198 | 1.38e-74 | 223 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025171.t1 | AT4G29820 | 67.619 | 210 | 61 | 3 | 1 | 203 | 13 | 222 | 1.33e-103 | 298 |
| MS.gene025171.t1 | AT4G25550 | 53.646 | 192 | 83 | 2 | 16 | 201 | 7 | 198 | 1.16e-73 | 221 |
Find 54 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTGAATTCTTACTATTT+TGG | 0.085732 | 2.4:+49723820 | MS.gene025171:CDS |
| AACTTCCCGGTGGCCGTTTA+AGG | 0.159383 | 2.4:+49725402 | MS.gene025171:CDS |
| CCTTGTGATTGTCACGAATT+TGG | 0.184356 | 2.4:-49729217 | None:intergenic |
| GCTTTCTGCTGATGAAAATT+TGG | 0.226769 | 2.4:+49725572 | MS.gene025171:CDS |
| ACCGTGAACCTTCGACTTTC+TGG | 0.232290 | 2.4:-49729158 | None:intergenic |
| TACATTAATGTTTCAAAATC+AGG | 0.276613 | 2.4:-49728991 | None:intergenic |
| AATTCCATCTTTAAACTTCC+CGG | 0.314671 | 2.4:+49725389 | MS.gene025171:CDS |
| TCTTTGAAGAGAGTGATCTT+TGG | 0.357018 | 2.4:-49723863 | None:intergenic |
| CGTTTAAGGCCAGGTGAATC+AGG | 0.374324 | 2.4:+49725416 | MS.gene025171:CDS |
| ACCTTTGGATGTTTGACATT+AGG | 0.375143 | 2.4:-49729027 | None:intergenic |
| CTGATTCACCTGGCCTTAAA+CGG | 0.404586 | 2.4:-49725415 | None:intergenic |
| TGTGGGACCGCAGATATAAT+TGG | 0.405646 | 2.4:-49729323 | None:intergenic |
| CCCGGTGGCCGTTTAAGGCC+AGG | 0.447955 | 2.4:+49725407 | MS.gene025171:CDS |
| TTGACATTAGGAGGTAAGAA+AGG | 0.459956 | 2.4:-49729015 | None:intergenic |
| GTACAAAACTCTTCCTTGTA+CGG | 0.471709 | 2.4:+49729132 | MS.gene025171:CDS |
| TGATGAAAATTTGGCAGAAT+GGG | 0.473389 | 2.4:+49725581 | MS.gene025171:CDS |
| ACCTGGCCTTAAACGGCCAC+CGG | 0.480689 | 2.4:-49725408 | None:intergenic |
| GACTTTCTGGAAGCCGTACA+AGG | 0.483948 | 2.4:-49729145 | None:intergenic |
| CAACACAAGTTCGCATTCCA+CGG | 0.495413 | 2.4:-49724020 | None:intergenic |
| TTTGGATGTTTGACATTAGG+AGG | 0.500321 | 2.4:-49729024 | None:intergenic |
| CGATGGATTGAAGCGTAAGC+TGG | 0.513167 | 2.4:+49725542 | MS.gene025171:CDS |
| AAATTCTCTTTCAATATGAT+CGG | 0.516874 | 2.4:+49729356 | MS.gene025171:CDS |
| CTGATGAAAATTTGGCAGAA+TGG | 0.518008 | 2.4:+49725580 | MS.gene025171:CDS |
| TTGTGTTGAAGCTGTTATGA+TGG | 0.520741 | 2.4:+49724035 | MS.gene025171:CDS |
| AACACAAGTTCGCATTCCAC+GGG | 0.523775 | 2.4:-49724019 | None:intergenic |
| GGATGATGATGATGAGAAAG+TGG | 0.527329 | 2.4:+49723783 | MS.gene025171:CDS |
| ATATGTATTTCACAGACATA+CGG | 0.538939 | 2.4:+49729299 | MS.gene025171:intron |
| TGAAGAGAGTGATCTTTGGA+AGG | 0.539319 | 2.4:-49723859 | None:intergenic |
| TGACATTAGGAGGTAAGAAA+GGG | 0.539797 | 2.4:-49729014 | None:intergenic |
| GAGAATTTCGAGAGTAGCTG+TGG | 0.547415 | 2.4:-49729341 | None:intergenic |
| CCTGGCCTTAAACGGCCACC+GGG | 0.547556 | 2.4:-49725407 | None:intergenic |
| TATTGATTTCTAGATACCGA+TGG | 0.559474 | 2.4:+49725525 | MS.gene025171:intron |
| GGAGTAATGATGGGTGAAAA+CGG | 0.560158 | 2.4:+49723754 | None:intergenic |
| GATTGAAGCGTAAGCTGGCA+AGG | 0.561989 | 2.4:+49725547 | MS.gene025171:CDS |
| CAGGTCTCCACCACATTCCA+AGG | 0.563880 | 2.4:-49728972 | None:intergenic |
| CAGCTTACGCTTCAATCCAT+CGG | 0.564207 | 2.4:-49725541 | None:intergenic |
| TGATGGGTGAAAACGGAACA+AGG | 0.565754 | 2.4:+49723761 | None:intergenic |
| TATGTATTTCACAGACATAC+GGG | 0.569117 | 2.4:+49729300 | MS.gene025171:intron |
| GCCACCGGGAAGTTTAAAGA+TGG | 0.570521 | 2.4:-49725393 | None:intergenic |
| TCCAGAAAGTCGAAGGTTCA+CGG | 0.573505 | 2.4:+49729157 | MS.gene025171:CDS |
| GGGAGTGCCTTGGAATGTGG+TGG | 0.578025 | 2.4:+49728965 | MS.gene025171:CDS |
| ATTTGAAACAGCAACAAATG+TGG | 0.580078 | 2.4:-49725362 | None:intergenic |
| TACGGCTTCCAGAAAGTCGA+AGG | 0.582387 | 2.4:+49729150 | MS.gene025171:CDS |
| TCCTAATGTCAAACATCCAA+AGG | 0.584132 | 2.4:+49729026 | MS.gene025171:CDS |
| TGAAAATTTGGCAGAATGGG+AGG | 0.585137 | 2.4:+49725584 | MS.gene025171:CDS |
| CCAAAATAGTAAGAATTCAG+AGG | 0.595446 | 2.4:-49723820 | None:intergenic |
| CCTAGCATACCTGATTCACC+TGG | 0.612431 | 2.4:-49725425 | None:intergenic |
| GTTAATAGCTATGATGCCCG+TGG | 0.626587 | 2.4:+49724003 | MS.gene025171:intron |
| CCAAATTCGTGACAATCACA+AGG | 0.646165 | 2.4:+49729217 | MS.gene025171:CDS |
| TTGTCACGAATTTGGCACAA+CGG | 0.671045 | 2.4:-49729209 | None:intergenic |
| AGAATTTCGAGAGTAGCTGT+GGG | 0.689430 | 2.4:-49729340 | None:intergenic |
| ATACGGGCCAATTATATCTG+CGG | 0.695873 | 2.4:+49729316 | MS.gene025171:CDS |
| TCCATCTTTAAACTTCCCGG+TGG | 0.709737 | 2.4:+49725392 | MS.gene025171:CDS |
| GATGGGTGAAAACGGAACAA+GGG | 0.716935 | 2.4:+49723762 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAATTTATTTTTTTTTA+AGG | + | chr2.4:49726718-49726737 | MS.gene025171:intron | 0.0% |
| !!! | TTAATATTAGTCTATAATTA+AGG | - | chr2.4:49726590-49726609 | None:intergenic | 10.0% |
| !!! | TTTATATAAAATCAATTTTG+TGG | - | chr2.4:49726341-49726360 | None:intergenic | 10.0% |
| !! | AAATGTAATTTACTGAATTT+AGG | + | chr2.4:49728939-49728958 | MS.gene025171:intron | 15.0% |
| !! | ACTCCATTATATAATTATAT+TGG | - | chr2.4:49728099-49728118 | None:intergenic | 15.0% |
| !! | ATTATATAATTATATTGGAC+CGG | - | chr2.4:49728094-49728113 | None:intergenic | 15.0% |
| !! | CTAAAAGATATATCTAATAT+AGG | - | chr2.4:49728746-49728765 | None:intergenic | 15.0% |
| !! | CTAAAGCAAAAAATTTAATA+TGG | - | chr2.4:49726394-49726413 | None:intergenic | 15.0% |
| !! | TCAAGGAAATAAAATAAATA+AGG | - | chr2.4:49726841-49726860 | None:intergenic | 15.0% |
| !! | TTAAATTAATACACGAAAAT+AGG | - | chr2.4:49723925-49723944 | None:intergenic | 15.0% |
| !!! | AATATAATTATATAATGGAG+TGG | + | chr2.4:49728098-49728117 | MS.gene025171:intron | 15.0% |
| !!! | CATATTAAATTTTTTGCTTT+AGG | + | chr2.4:49726392-49726411 | MS.gene025171:intron | 15.0% |
| !!! | TAACCAAATTAATTTTTTAG+AGG | - | chr2.4:49726217-49726236 | None:intergenic | 15.0% |
| !! | AAATTCTCTTTCAATATGAT+CGG | + | chr2.4:49729356-49729375 | MS.gene025171:CDS | 20.0% |
| !! | AACATAACTGATTACTAAAA+AGG | + | chr2.4:49726277-49726296 | MS.gene025171:intron | 20.0% |
| !! | AACATTACCAAATTATTCAA+AGG | - | chr2.4:49727040-49727059 | None:intergenic | 20.0% |
| !! | AATTCAGGATTATTGTATTA+TGG | - | chr2.4:49724142-49724161 | None:intergenic | 20.0% |
| !! | AATTCTCTAACCTTATTATT+AGG | + | chr2.4:49726125-49726144 | MS.gene025171:intron | 20.0% |
| !! | AATTGTTAAGAGAGAAAATT+AGG | + | chr2.4:49724720-49724739 | MS.gene025171:intron | 20.0% |
| !! | ACATTACCAAATTATTCAAA+GGG | - | chr2.4:49727039-49727058 | None:intergenic | 20.0% |
| !! | ACTAATAGTAAGATTGTATT+TGG | + | chr2.4:49726994-49727013 | MS.gene025171:intron | 20.0% |
| !! | ATTAAAATTCTTAAATGTCG+CGG | - | chr2.4:49724406-49724425 | None:intergenic | 20.0% |
| !! | ATTCTCTAACCTTATTATTA+GGG | + | chr2.4:49726126-49726145 | MS.gene025171:intron | 20.0% |
| !! | ATTGTTAAGAGAGAAAATTA+GGG | + | chr2.4:49724721-49724740 | MS.gene025171:intron | 20.0% |
| !! | CAAAATTATGGATGAAAAAA+AGG | + | chr2.4:49726191-49726210 | MS.gene025171:intron | 20.0% |
| !! | CTTTAAACTTAATTAACGTA+TGG | + | chr2.4:49724917-49724936 | MS.gene025171:intron | 20.0% |
| !! | GATTCTAAGTTTAAAAAGAA+AGG | - | chr2.4:49725622-49725641 | None:intergenic | 20.0% |
| !! | GGTCCAATATAATTATATAA+TGG | + | chr2.4:49728093-49728112 | MS.gene025171:intron | 20.0% |
| !! | TACAACTTGTCTTAAAAAAA+AGG | - | chr2.4:49724066-49724085 | None:intergenic | 20.0% |
| !! | TACATTAATGTTTCAAAATC+AGG | - | chr2.4:49728994-49729013 | None:intergenic | 20.0% |
| !! | TGAATATACAGTATAGTATA+AGG | - | chr2.4:49727248-49727267 | None:intergenic | 20.0% |
| !! | TTATATAATTATATTGGACC+GGG | - | chr2.4:49728093-49728112 | None:intergenic | 20.0% |
| !! | TTATCTTGTCTATTAGAATT+CGG | + | chr2.4:49725274-49725293 | MS.gene025171:intron | 20.0% |
| !! | TTGAAAGTAAATAATAAGCA+GGG | - | chr2.4:49726439-49726458 | None:intergenic | 20.0% |
| !!! | AATGAGTGTAAGAAAATTTT+GGG | - | chr2.4:49725839-49725858 | None:intergenic | 20.0% |
| !!! | ATTTTTACGAGTTTTTACTA+GGG | + | chr2.4:49725494-49725513 | MS.gene025171:intron | 20.0% |
| !!! | TACTTGTGTTTTTTATGATT+TGG | + | chr2.4:49724309-49724328 | MS.gene025171:intron | 20.0% |
| !!! | TATTTTTACGAGTTTTTACT+AGG | + | chr2.4:49725493-49725512 | MS.gene025171:intron | 20.0% |
| !!! | TGTTTTTTTTTTTGGTAGAA+AGG | + | chr2.4:49724091-49724110 | MS.gene025171:intron | 20.0% |
| !!! | TTCTTTTTAAACTTAGAATC+TGG | + | chr2.4:49725622-49725641 | MS.gene025171:intron | 20.0% |
| !!! | TTTTGAGGAAAAAATAACTA+GGG | + | chr2.4:49726784-49726803 | MS.gene025171:intron | 20.0% |
| !!! | TTTTTGAGGAAAAAATAACT+AGG | + | chr2.4:49726783-49726802 | MS.gene025171:intron | 20.0% |
| !!! | TTTTTTCATCCATAATTTTG+AGG | - | chr2.4:49726191-49726210 | None:intergenic | 20.0% |
| ! | AAGTAGAAATAACAATCACA+AGG | - | chr2.4:49726635-49726654 | None:intergenic | 25.0% |
| ! | AATCATCATGACTAAATATG+AGG | + | chr2.4:49727331-49727350 | MS.gene025171:intron | 25.0% |
| ! | AATGTAACTGTTCTTGATTT+AGG | + | chr2.4:49725322-49725341 | MS.gene025171:intron | 25.0% |
| ! | ACAAATTTCTTCTTGAAGAT+TGG | + | chr2.4:49725190-49725209 | MS.gene025171:intron | 25.0% |
| ! | ATAAAAAACGCAATGACTTA+AGG | - | chr2.4:49724634-49724653 | None:intergenic | 25.0% |
| ! | ATACAGTATAGTATAAGGAA+TGG | - | chr2.4:49727243-49727262 | None:intergenic | 25.0% |
| ! | ATATGTATTTCACAGACATA+CGG | + | chr2.4:49729299-49729318 | MS.gene025171:intron | 25.0% |
| ! | ATTTGATGAATGCAATTACT+AGG | + | chr2.4:49726752-49726771 | MS.gene025171:intron | 25.0% |
| ! | CATATTCCTCAAAAAGAAAA+AGG | - | chr2.4:49727169-49727188 | None:intergenic | 25.0% |
| ! | GTAATTTACTGAATTTAGGT+GGG | + | chr2.4:49728943-49728962 | MS.gene025171:intron | 25.0% |
| ! | GTTGAAAGTAAATAATAAGC+AGG | - | chr2.4:49726440-49726459 | None:intergenic | 25.0% |
| ! | TAATTTACTGAATTTAGGTG+GGG | + | chr2.4:49728944-49728963 | MS.gene025171:intron | 25.0% |
| ! | TATAACAGAAAAAACGAACT+TGG | - | chr2.4:49723896-49723915 | None:intergenic | 25.0% |
| ! | TCATGATGATTGAAATGAAA+TGG | - | chr2.4:49727322-49727341 | None:intergenic | 25.0% |
| ! | TCTGTGAAATACATATGTTA+AGG | - | chr2.4:49729295-49729314 | None:intergenic | 25.0% |
| ! | TGTAATTTACTGAATTTAGG+TGG | + | chr2.4:49728942-49728961 | MS.gene025171:intron | 25.0% |
| ! | TTATATTCTGATCAGATACT+TGG | + | chr2.4:49725739-49725758 | MS.gene025171:intron | 25.0% |
| ! | TTTCAAATGGTTAGAGAATT+GGG | + | chr2.4:49728505-49728524 | MS.gene025171:intron | 25.0% |
| !! | AAAAAAGAGCTAAGGTTTTT+GGG | - | chr2.4:49725084-49725103 | None:intergenic | 25.0% |
| !! | AGGCCTCTAAAAAATTAATT+TGG | + | chr2.4:49726211-49726230 | MS.gene025171:intron | 25.0% |
| !! | AGTAGAATTTTGAATCTTGT+AGG | + | chr2.4:49728791-49728810 | MS.gene025171:intron | 25.0% |
| !! | ATGTAGAAAGAGTACAATAT+AGG | - | chr2.4:49728883-49728902 | None:intergenic | 25.0% |
| !! | CAATGAGTGTAAGAAAATTT+TGG | - | chr2.4:49725840-49725859 | None:intergenic | 25.0% |
| !! | CTAACATTAAAACTTGCTTA+AGG | - | chr2.4:49729073-49729092 | None:intergenic | 25.0% |
| !! | TTTTTATGTTTCGGTAGTTT+GGG | + | chr2.4:49728151-49728170 | MS.gene025171:intron | 25.0% |
| !!! | CTTTTTCTTTTTGAGGAATA+TGG | + | chr2.4:49727167-49727186 | MS.gene025171:intron | 25.0% |
| !!! | CTTTTTTTTCAGCAACTTAA+TGG | - | chr2.4:49724285-49724304 | None:intergenic | 25.0% |
| !!! | GAGAATAGTTTGATTTTTAG+AGG | + | chr2.4:49724845-49724864 | MS.gene025171:intron | 25.0% |
| !!! | GTACTCTCTGTTTTTTTTTT+TGG | + | chr2.4:49724083-49724102 | MS.gene025171:intron | 25.0% |
| !!! | TTGTTTTAGTGATTGTAAAG+TGG | + | chr2.4:49725708-49725727 | MS.gene025171:intron | 25.0% |
| AAAAAGCTTGAGTCATCAAA+TGG | + | chr2.4:49724889-49724908 | MS.gene025171:intron | 30.0% | |
| AAAAAGGTCTCAATTACTCT+TGG | + | chr2.4:49726293-49726312 | MS.gene025171:intron | 30.0% | |
| AAGTGTAACAATCGTCATTT+AGG | + | chr2.4:49726933-49726952 | MS.gene025171:intron | 30.0% | |
| AATTCCATCTTTAAACTTCC+CGG | + | chr2.4:49725389-49725408 | MS.gene025171:CDS | 30.0% | |
| AATTTACTGAATTTAGGTGG+GGG | + | chr2.4:49728945-49728964 | MS.gene025171:intron | 30.0% | |
| AATTTCTTCTTGAAGATTGG+AGG | + | chr2.4:49725193-49725212 | MS.gene025171:intron | 30.0% | |
| AGACAGAAGAATATCTTCTT+AGG | + | chr2.4:49724762-49724781 | MS.gene025171:intron | 30.0% | |
| AGCTCTACTATATAAGAGTT+GGG | + | chr2.4:49724187-49724206 | MS.gene025171:intron | 30.0% | |
| AGGAATGGAGATAATCATTA+TGG | - | chr2.4:49727228-49727247 | None:intergenic | 30.0% | |
| ATGTGTTTGCCAATATAGAA+AGG | + | chr2.4:49724511-49724530 | MS.gene025171:intron | 30.0% | |
| ATTTGCAAACATTTCGAACT+CGG | - | chr2.4:49725474-49725493 | None:intergenic | 30.0% | |
| CAGTTTCCCTTTGAATAATT+TGG | + | chr2.4:49727030-49727049 | MS.gene025171:intron | 30.0% | |
| CCAAAATAGTAAGAATTCAG+AGG | - | chr2.4:49723823-49723842 | None:intergenic | 30.0% | |
| CTACATTTACGTTACAATTC+AGG | - | chr2.4:49724157-49724176 | None:intergenic | 30.0% | |
| GGAACTTAATGTGAAGAAAT+TGG | - | chr2.4:49724231-49724250 | None:intergenic | 30.0% | |
| GTTTATGTTATTGCACTCTT+TGG | + | chr2.4:49728813-49728832 | MS.gene025171:intron | 30.0% | |
| GTTTCAAATGGTTAGAGAAT+TGG | + | chr2.4:49728504-49728523 | MS.gene025171:intron | 30.0% | |
| TACCATTACTCGATGATATT+TGG | + | chr2.4:49725810-49725829 | MS.gene025171:intron | 30.0% | |
| TATGAAGGATCGATATTGAT+CGG | - | chr2.4:49727567-49727586 | None:intergenic | 30.0% | |
| TATGTATTTCACAGACATAC+GGG | + | chr2.4:49729300-49729319 | MS.gene025171:intron | 30.0% | |
| TCAACACACAAGAATAATAC+TGG | - | chr2.4:49726106-49726125 | None:intergenic | 30.0% | |
| TGATGAAAATTTGGCAGAAT+GGG | + | chr2.4:49725581-49725600 | MS.gene025171:CDS | 30.0% | |
| TTCCAAATATCATCGAGTAA+TGG | - | chr2.4:49725815-49725834 | None:intergenic | 30.0% | |
| TTCCATTTCAAAACCATGTT+AGG | - | chr2.4:49727875-49727894 | None:intergenic | 30.0% | |
| TTTAGGCCTCTTAATCTTTA+GGG | + | chr2.4:49726409-49726428 | MS.gene025171:intron | 30.0% | |
| ! | AAAACAAGTTTTGCCTAACA+TGG | + | chr2.4:49727859-49727878 | MS.gene025171:intron | 30.0% |
| ! | AAACTTCAAGCTAAGTTTTC+CGG | - | chr2.4:49725238-49725257 | None:intergenic | 30.0% |
| ! | AAAGGTCATAGAGAACTTTT+AGG | - | chr2.4:49727151-49727170 | None:intergenic | 30.0% |
| ! | AAGGTCATAGAGAACTTTTA+GGG | - | chr2.4:49727150-49727169 | None:intergenic | 30.0% |
| ! | AGTCTTCGCAATTAGATTTT+GGG | + | chr2.4:49725054-49725073 | MS.gene025171:intron | 30.0% |
| ! | ATAAAGTGATTGAAGAGCAT+AGG | - | chr2.4:49727993-49728012 | None:intergenic | 30.0% |
| ! | ATTTCCTTGACTTGAGATAT+TGG | + | chr2.4:49726851-49726870 | MS.gene025171:intron | 30.0% |
| ! | ATTTGAAACAGCAACAAATG+TGG | - | chr2.4:49725365-49725384 | None:intergenic | 30.0% |
| ! | CAAAAAAGAGCTAAGGTTTT+TGG | - | chr2.4:49725085-49725104 | None:intergenic | 30.0% |
| ! | CCTCTGAATTCTTACTATTT+TGG | + | chr2.4:49723820-49723839 | MS.gene025171:CDS | 30.0% |
| ! | CTATGACCTTTTTCTTTTTG+AGG | + | chr2.4:49727160-49727179 | MS.gene025171:intron | 30.0% |
| ! | GGAGATAATCATTATGGTTT+TGG | - | chr2.4:49727222-49727241 | None:intergenic | 30.0% |
| ! | GTTTTTATGTTTCGGTAGTT+TGG | + | chr2.4:49728150-49728169 | MS.gene025171:intron | 30.0% |
| ! | TAAAGTGATTGAAGAGCATA+GGG | - | chr2.4:49727992-49728011 | None:intergenic | 30.0% |
| ! | TAGCTCTACTATATAAGAGT+TGG | + | chr2.4:49724186-49724205 | MS.gene025171:intron | 30.0% |
| ! | TAGTCTTCGCAATTAGATTT+TGG | + | chr2.4:49725053-49725072 | MS.gene025171:intron | 30.0% |
| ! | TTGGTAACAAAAAAGAGCTA+AGG | - | chr2.4:49725092-49725111 | None:intergenic | 30.0% |
| ! | TTTGCAGTATGATTCTGAAA+TGG | + | chr2.4:49725298-49725317 | MS.gene025171:intron | 30.0% |
| ! | TTTGTGTTTCTGTATAAGGA+GGG | - | chr2.4:49727600-49727619 | None:intergenic | 30.0% |
| !! | AGTTTGATTTTTAGAGGTAG+AGG | + | chr2.4:49724851-49724870 | MS.gene025171:intron | 30.0% |
| !! | ATGTTAGGCAAAACTTGTTT+TGG | - | chr2.4:49727860-49727879 | None:intergenic | 30.0% |
| !! | CACTCTTTGGAATCAAAATT+GGG | + | chr2.4:49728826-49728845 | MS.gene025171:intron | 30.0% |
| !! | CCAAAGGTACATTTTTCAAA+AGG | + | chr2.4:49729042-49729061 | MS.gene025171:intron | 30.0% |
| !! | CCTTTTGAAAAATGTACCTT+TGG | - | chr2.4:49729045-49729064 | None:intergenic | 30.0% |
| !! | GTTTGATTTTTAGAGGTAGA+GGG | + | chr2.4:49724852-49724871 | MS.gene025171:intron | 30.0% |
| !! | TATTGATTTCTAGATACCGA+TGG | + | chr2.4:49725525-49725544 | MS.gene025171:intron | 30.0% |
| !! | TCTGTGGTGTTTTTATGTTT+CGG | + | chr2.4:49728142-49728161 | MS.gene025171:intron | 30.0% |
| !! | TGATACGTTGATGATGTAAT+CGG | - | chr2.4:49725898-49725917 | None:intergenic | 30.0% |
| !! | TTTTGTGTTTCTGTATAAGG+AGG | - | chr2.4:49727601-49727620 | None:intergenic | 30.0% |
| !!! | AAGTTTTTCAAGTATCGTAG+TGG | + | chr2.4:49726033-49726052 | MS.gene025171:intron | 30.0% |
| !!! | ACTAGGAAGATCTTTTTTTG+AGG | + | chr2.4:49726769-49726788 | MS.gene025171:intron | 30.0% |
| !!! | GATAGCAACTTCATGTTTTT+TGG | - | chr2.4:49729185-49729204 | None:intergenic | 30.0% |
| !!! | TCATTATGGTTTTGGTCTTT+TGG | - | chr2.4:49727214-49727233 | None:intergenic | 30.0% |
| !!! | TGGTTTTGTGTTTCTGTATA+AGG | - | chr2.4:49727604-49727623 | None:intergenic | 30.0% |
| AAAAACACTCAGAGATGCAT+TGG | + | chr2.4:49724802-49724821 | MS.gene025171:intron | 35.0% | |
| AAGTAAATAATAAGCAGGGC+CGG | - | chr2.4:49726435-49726454 | None:intergenic | 35.0% | |
| ACAAATGAACGCGTTTCAAA+TGG | + | chr2.4:49728492-49728511 | MS.gene025171:intron | 35.0% | |
| ACCTTTGGATGTTTGACATT+AGG | - | chr2.4:49729030-49729049 | None:intergenic | 35.0% | |
| ACGCTATAAGTGTAGAGAAA+TGG | - | chr2.4:49724254-49724273 | None:intergenic | 35.0% | |
| ACTCTTGAATCAGAGACATA+AGG | - | chr2.4:49728708-49728727 | None:intergenic | 35.0% | |
| AGTTTCACGATCTATCTTCA+TGG | + | chr2.4:49729100-49729119 | MS.gene025171:intron | 35.0% | |
| ATATTGGAGAGTTTGTGGTA+TGG | + | chr2.4:49728433-49728452 | MS.gene025171:intron | 35.0% | |
| ATGAAGGATCGATATTGATC+GGG | - | chr2.4:49727566-49727585 | None:intergenic | 35.0% | |
| ATGGTTAGCAAATTCAACAG+TGG | - | chr2.4:49727396-49727415 | None:intergenic | 35.0% | |
| ATTGCGAAGACTAAGAATGA+CGG | - | chr2.4:49725046-49725065 | None:intergenic | 35.0% | |
| CGCTATAAGTGTAGAGAAAT+GGG | - | chr2.4:49724253-49724272 | None:intergenic | 35.0% | |
| CTGATGAAAATTTGGCAGAA+TGG | + | chr2.4:49725580-49725599 | MS.gene025171:CDS | 35.0% | |
| CTTTAGGCCTCTTAATCTTT+AGG | + | chr2.4:49726408-49726427 | MS.gene025171:intron | 35.0% | |
| GAAAAGACAAGTAAACAGCT+AGG | + | chr2.4:49724331-49724350 | MS.gene025171:intron | 35.0% | |
| GCTATAAGTGTAGAGAAATG+GGG | - | chr2.4:49724252-49724271 | None:intergenic | 35.0% | |
| GCTCTACTATATAAGAGTTG+GGG | + | chr2.4:49724188-49724207 | MS.gene025171:intron | 35.0% | |
| GCTTTCTGCTGATGAAAATT+TGG | + | chr2.4:49725572-49725591 | MS.gene025171:CDS | 35.0% | |
| GGTGTTAGTACATTGATGAA+CGG | + | chr2.4:49728598-49728617 | MS.gene025171:intron | 35.0% | |
| GTACAAAACTCTTCCTTGTA+CGG | + | chr2.4:49729132-49729151 | MS.gene025171:CDS | 35.0% | |
| TAATTATATTGGACCGGGTT+TGG | - | chr2.4:49728088-49728107 | None:intergenic | 35.0% | |
| TAGACCAATATCTCAAGTCA+AGG | - | chr2.4:49726858-49726877 | None:intergenic | 35.0% | |
| TCAAAATACAGAAAAGCTGC+AGG | - | chr2.4:49724980-49724999 | None:intergenic | 35.0% | |
| TCCTAATGTCAAACATCCAA+AGG | + | chr2.4:49729026-49729045 | MS.gene025171:CDS | 35.0% | |
| TCTAACCTTATTATTAGGGC+CGG | + | chr2.4:49726130-49726149 | MS.gene025171:intron | 35.0% | |
| TGACATTAGGAGGTAAGAAA+GGG | - | chr2.4:49729017-49729036 | None:intergenic | 35.0% | |
| TGCTAGAAGCCTTTCTATAT+TGG | - | chr2.4:49724523-49724542 | None:intergenic | 35.0% | |
| TGGTTAGCAAATTCAACAGT+GGG | - | chr2.4:49727395-49727414 | None:intergenic | 35.0% | |
| TGTGAAGAAATTGGAGAATC+CGG | - | chr2.4:49724222-49724241 | None:intergenic | 35.0% | |
| TTGAATCAGAGACATAAGGT+TGG | - | chr2.4:49728704-49728723 | None:intergenic | 35.0% | |
| TTGACATTAGGAGGTAAGAA+AGG | - | chr2.4:49729018-49729037 | None:intergenic | 35.0% | |
| TTGCTTAATTGAAGAGAGCT+TGG | - | chr2.4:49725111-49725130 | None:intergenic | 35.0% | |
| TTGTGTTGAAGCTGTTATGA+TGG | + | chr2.4:49724035-49724054 | MS.gene025171:CDS | 35.0% | |
| TTTGGATGTTTGACATTAGG+AGG | - | chr2.4:49729027-49729046 | None:intergenic | 35.0% | |
| TTTGGTAAAGCATGTTTGAC+CGG | + | chr2.4:49725216-49725235 | MS.gene025171:intron | 35.0% | |
| ! | AAAGTGTAGAGTTGCTTTGA+TGG | + | chr2.4:49728660-49728679 | MS.gene025171:intron | 35.0% |
| ! | AGAAGGTACAGAGAAACAAA+GGG | + | chr2.4:49727935-49727954 | MS.gene025171:intron | 35.0% |
| ! | AGATTTTTATGGGCTTTACG+TGG | + | chr2.4:49728232-49728251 | MS.gene025171:intron | 35.0% |
| ! | AGGTTGAGCAAATTGCTATT+GGG | + | chr2.4:49728191-49728210 | MS.gene025171:intron | 35.0% |
| ! | CGTAACTTGTGTAATCTCTT+GGG | - | chr2.4:49728282-49728301 | None:intergenic | 35.0% |
| ! | GATTCAACCAATTCGAGTTT+CGG | - | chr2.4:49727797-49727816 | None:intergenic | 35.0% |
| ! | TCGTAACTTGTGTAATCTCT+TGG | - | chr2.4:49728283-49728302 | None:intergenic | 35.0% |
| ! | TCTTTGAAGAGAGTGATCTT+TGG | - | chr2.4:49723866-49723885 | None:intergenic | 35.0% |
| ! | TGTTAACAAGCGGTAGTTTT+GGG | - | chr2.4:49727469-49727488 | None:intergenic | 35.0% |
| ! | TTAGGGTGGAACTTTTAGAT+GGG | - | chr2.4:49727133-49727152 | None:intergenic | 35.0% |
| !! | ATTAGGTTGGATTATAGGGT+GGG | + | chr2.4:49728541-49728560 | MS.gene025171:intron | 35.0% |
| !! | CTTTGGAATCAAAATTGGGT+TGG | + | chr2.4:49728830-49728849 | MS.gene025171:intron | 35.0% |
| !! | GCACTCTTTGGAATCAAAAT+TGG | + | chr2.4:49728825-49728844 | MS.gene025171:intron | 35.0% |
| !! | GGAGATTAGGTTGGATTATA+GGG | + | chr2.4:49728537-49728556 | MS.gene025171:intron | 35.0% |
| !! | TACCAGATGGGTTTTTGAAA+CGG | + | chr2.4:49728311-49728330 | MS.gene025171:intron | 35.0% |
| !! | TGGAGATTAGGTTGGATTAT+AGG | + | chr2.4:49728536-49728555 | MS.gene025171:intron | 35.0% |
| !! | TGGATTTGATTTGTGTCCAT+CGG | + | chr2.4:49724937-49724956 | MS.gene025171:intron | 35.0% |
| !! | TTCGTTTTTAGATGTGCTTG+CGG | + | chr2.4:49724655-49724674 | MS.gene025171:intron | 35.0% |
| !! | TTTAGGGTGGAACTTTTAGA+TGG | - | chr2.4:49727134-49727153 | None:intergenic | 35.0% |
| !!! | GCAAAACTTGTTTTGGAATC+GGG | - | chr2.4:49727853-49727872 | None:intergenic | 35.0% |
| !!! | GGCAAAACTTGTTTTGGAAT+CGG | - | chr2.4:49727854-49727873 | None:intergenic | 35.0% |
| !!! | TGCCTAACATGGTTTTGAAA+TGG | + | chr2.4:49727870-49727889 | MS.gene025171:intron | 35.0% |
| !!! | TGTCATTGTTTTTGACCAAG+AGG | - | chr2.4:49726975-49726994 | None:intergenic | 35.0% |
| AAAAACACCACAGAAGCAAG+AGG | - | chr2.4:49728136-49728155 | None:intergenic | 40.0% | |
| AAACAGCTAGGCTAACTGAA+AGG | + | chr2.4:49724343-49724362 | MS.gene025171:intron | 40.0% | |
| ACACAGGACAAGCTTAGATT+AGG | + | chr2.4:49724692-49724711 | MS.gene025171:intron | 40.0% | |
| ACGAGAATGTTCTACCAGAT+GGG | + | chr2.4:49728299-49728318 | MS.gene025171:intron | 40.0% | |
| ACGATCTATCTTCATGGTGT+AGG | + | chr2.4:49729106-49729125 | MS.gene025171:intron | 40.0% | |
| ACTCGATATTGGAGAGTTTG+TGG | + | chr2.4:49728428-49728447 | MS.gene025171:intron | 40.0% | |
| AGAATTTCGAGAGTAGCTGT+GGG | - | chr2.4:49729343-49729362 | None:intergenic | 40.0% | |
| AGTCATCAACTCAAAACTGC+AGG | - | chr2.4:49729263-49729282 | None:intergenic | 40.0% | |
| ATACGGGCCAATTATATCTG+CGG | + | chr2.4:49729316-49729335 | MS.gene025171:CDS | 40.0% | |
| ATCGTCATTTAGGAGAAGAG+AGG | + | chr2.4:49726943-49726962 | MS.gene025171:intron | 40.0% | |
| ATCTCACCAAGAGTGAAAAC+AGG | + | chr2.4:49726060-49726079 | MS.gene025171:intron | 40.0% | |
| ATGTAATCGGAGAAGAACGA+CGG | - | chr2.4:49725885-49725904 | None:intergenic | 40.0% | |
| ATTAGCAGTGGAGATTAGGT+TGG | + | chr2.4:49728528-49728547 | MS.gene025171:intron | 40.0% | |
| CAAGTTGTACTCTCTCAAAG+TGG | + | chr2.4:49724115-49724134 | MS.gene025171:intron | 40.0% | |
| CATCATCGATGTAGCTAATG+AGG | + | chr2.4:49727706-49727725 | MS.gene025171:intron | 40.0% | |
| CCAAATTCGTGACAATCACA+AGG | + | chr2.4:49729217-49729236 | MS.gene025171:CDS | 40.0% | |
| CCTTGTGATTGTCACGAATT+TGG | - | chr2.4:49729220-49729239 | None:intergenic | 40.0% | |
| CTCATTAGCTACATCGATGA+TGG | - | chr2.4:49727708-49727727 | None:intergenic | 40.0% | |
| CTTCTTGAAGATTGGAGGTT+TGG | + | chr2.4:49725198-49725217 | MS.gene025171:intron | 40.0% | |
| GAATCAGGTATGCTAGGATT+AGG | + | chr2.4:49725431-49725450 | MS.gene025171:intron | 40.0% | |
| GAGGGAGATGTAAGTTATGA+AGG | - | chr2.4:49727582-49727601 | None:intergenic | 40.0% | |
| GCTAACAAACTTGTGAGAGA+AGG | - | chr2.4:49725945-49725964 | None:intergenic | 40.0% | |
| TACACCAACCATTGGAAACA+TGG | + | chr2.4:49727367-49727386 | MS.gene025171:intron | 40.0% | |
| TACGAGAATGTTCTACCAGA+TGG | + | chr2.4:49728298-49728317 | MS.gene025171:intron | 40.0% | |
| TGAAAATTTGGCAGAATGGG+AGG | + | chr2.4:49725584-49725603 | MS.gene025171:CDS | 40.0% | |
| TGAAGAGAGTGATCTTTGGA+AGG | - | chr2.4:49723862-49723881 | None:intergenic | 40.0% | |
| TGGAGGTAAGTGTTAACAAG+CGG | - | chr2.4:49727479-49727498 | None:intergenic | 40.0% | |
| TTCATCTCTACACCAACCAT+TGG | + | chr2.4:49727359-49727378 | MS.gene025171:intron | 40.0% | |
| TTGTCACGAATTTGGCACAA+CGG | - | chr2.4:49729212-49729231 | None:intergenic | 40.0% | |
| TTGTGGTTGGAACTCGATAT+TGG | + | chr2.4:49728417-49728436 | MS.gene025171:intron | 40.0% | |
| ! | AGAGTTGCTTTGATGGAGAA+TGG | + | chr2.4:49728667-49728686 | MS.gene025171:intron | 40.0% |
| ! | ATTTGTTGCTCTGCATACAC+CGG | - | chr2.4:49728478-49728497 | None:intergenic | 40.0% |
| ! | CAGGTTGAGCAAATTGCTAT+TGG | + | chr2.4:49728190-49728209 | MS.gene025171:intron | 40.0% |
| ! | CGCTGGGGTTAGATTTTTAT+GGG | + | chr2.4:49728222-49728241 | MS.gene025171:intron | 40.0% |
| ! | GAGAAGGTACAGAGAAACAA+AGG | + | chr2.4:49727934-49727953 | MS.gene025171:intron | 40.0% |
| ! | GGATGATGATGATGAGAAAG+TGG | + | chr2.4:49723783-49723802 | MS.gene025171:CDS | 40.0% |
| ! | GTGTTAACAAGCGGTAGTTT+TGG | - | chr2.4:49727470-49727489 | None:intergenic | 40.0% |
| ! | TAGAGAATTGGGATTAGCAG+TGG | + | chr2.4:49728516-49728535 | MS.gene025171:intron | 40.0% |
| ! | TGGGATTGTGATAACGAGAA+TGG | - | chr2.4:49727450-49727469 | None:intergenic | 40.0% |
| !! | AAAGGCGCTGCTTTGAAAAA+TGG | + | chr2.4:49724361-49724380 | MS.gene025171:intron | 40.0% |
| !! | CAGAGAAACAAAGGGTATTG+TGG | + | chr2.4:49727943-49727962 | MS.gene025171:intron | 40.0% |
| !! | GAGGAGTGTGTTTTTGATGT+TGG | - | chr2.4:49727624-49727643 | None:intergenic | 40.0% |
| !! | GATTAGGTTGGATTATAGGG+TGG | + | chr2.4:49728540-49728559 | MS.gene025171:intron | 40.0% |
| !! | GGATTTGATTTGTGTCCATC+GGG | + | chr2.4:49724938-49724957 | MS.gene025171:intron | 40.0% |
| !! | GGCTTTAGGCCTCAAAATTA+TGG | + | chr2.4:49726179-49726198 | MS.gene025171:intron | 40.0% |
| !! | GTCATAGAGAACTTTTAGGG+TGG | - | chr2.4:49727147-49727166 | None:intergenic | 40.0% |
| !! | TAATACTGGTTCACCCAATG+CGG | - | chr2.4:49726092-49726111 | None:intergenic | 40.0% |
| !! | TTCCACCGGTTTACACAATT+GGG | + | chr2.4:49728026-49728045 | MS.gene025171:intron | 40.0% |
| AAATCCACCCACTGCCTTAT+GGG | - | chr2.4:49728389-49728408 | None:intergenic | 45.0% | |
| AAATGTCGCGGCTGTAATCA+TGG | - | chr2.4:49724394-49724413 | None:intergenic | 45.0% | |
| AACACAAGTTCGCATTCCAC+GGG | - | chr2.4:49724022-49724041 | None:intergenic | 45.0% | |
| ACAGGCCCAATTGTGTAAAC+CGG | - | chr2.4:49728034-49728053 | None:intergenic | 45.0% | |
| ACCTAACACCTCTGCGAATA+GGG | - | chr2.4:49726000-49726019 | None:intergenic | 45.0% | |
| ACGCAAAGAAGAGGTAGCAA+GGG | - | chr2.4:49727739-49727758 | None:intergenic | 45.0% | |
| AGAATGGTTGCAGAGAGTTG+AGG | - | chr2.4:49727434-49727453 | None:intergenic | 45.0% | |
| AGACTAAGAATGACGGCAAG+TGG | - | chr2.4:49725039-49725058 | None:intergenic | 45.0% | |
| AGTGGGAACCATGTTTCCAA+TGG | - | chr2.4:49727378-49727397 | None:intergenic | 45.0% | |
| CAACACAAGTTCGCATTCCA+CGG | - | chr2.4:49724023-49724042 | None:intergenic | 45.0% | |
| CAGCTTACGCTTCAATCCAT+CGG | - | chr2.4:49725544-49725563 | None:intergenic | 45.0% | |
| CAGGCGGAAGAAGTTGAAAA+TGG | + | chr2.4:49728577-49728596 | MS.gene025171:intron | 45.0% | |
| CAGTGATGAGATTAGGAGGA+AGG | + | chr2.4:49728621-49728640 | MS.gene025171:intron | 45.0% | |
| CCACGAATAAGCGTCTTCTT+CGG | - | chr2.4:49727900-49727919 | None:intergenic | 45.0% | |
| CTACAGTAGTAGCTGTGATG+TGG | - | chr2.4:49724434-49724453 | None:intergenic | 45.0% | |
| GAAGAGAGGAAACTTCCTCT+TGG | + | chr2.4:49726957-49726976 | MS.gene025171:intron | 45.0% | |
| GAATGGTTGCAGAGAGTTGA+GGG | - | chr2.4:49727433-49727452 | None:intergenic | 45.0% | |
| GAGAATTTCGAGAGTAGCTG+TGG | - | chr2.4:49729344-49729363 | None:intergenic | 45.0% | |
| GATATTGATCGGGTGTAGGA+GGG | - | chr2.4:49727556-49727575 | None:intergenic | 45.0% | |
| GATCGATATTGATCGGGTGT+AGG | - | chr2.4:49727560-49727579 | None:intergenic | 45.0% | |
| GATGAAACGGAGATTAGTGG+CGG | - | chr2.4:49727516-49727535 | None:intergenic | 45.0% | |
| GATTTGTGTCGCATTGTGGT+TGG | + | chr2.4:49728404-49728423 | MS.gene025171:intron | 45.0% | |
| GGAACCATGTTTCCAATGGT+TGG | - | chr2.4:49727374-49727393 | None:intergenic | 45.0% | |
| GGATTTCGTATCATGCGAGA+AGG | + | chr2.4:49727918-49727937 | MS.gene025171:intron | 45.0% | |
| GGTAAGGATGGCTTACTAGA+TGG | + | chr2.4:49724823-49724842 | MS.gene025171:intron | 45.0% | |
| GTCCGTTTCAAAAACCCATC+TGG | - | chr2.4:49728316-49728335 | None:intergenic | 45.0% | |
| GTGGATGAAACGGAGATTAG+TGG | - | chr2.4:49727519-49727538 | None:intergenic | 45.0% | |
| GTTAATAGCTATGATGCCCG+TGG | + | chr2.4:49724003-49724022 | MS.gene025171:intron | 45.0% | |
| TAGATGTGCTTGCGGATGAA+TGG | + | chr2.4:49724663-49724682 | MS.gene025171:intron | 45.0% | |
| TATTATTAGGGCCGGCCTAA+GGG | + | chr2.4:49726138-49726157 | MS.gene025171:intron | 45.0% | |
| TCCAGAAAGTCGAAGGTTCA+CGG | + | chr2.4:49729157-49729176 | MS.gene025171:CDS | 45.0% | |
| TCCATCTTTAAACTTCCCGG+TGG | + | chr2.4:49725392-49725411 | MS.gene025171:CDS | 45.0% | |
| TGAACGGCAGTGATGAGATT+AGG | + | chr2.4:49728614-49728633 | MS.gene025171:intron | 45.0% | |
| TGAGAGAAGGAAACAGAGAG+TGG | - | chr2.4:49725932-49725951 | None:intergenic | 45.0% | |
| TGATGATTCGCAACTTCCAC+CGG | + | chr2.4:49728012-49728031 | MS.gene025171:intron | 45.0% | |
| TGTATAGTCCCTATTCGCAG+AGG | + | chr2.4:49725989-49726008 | MS.gene025171:intron | 45.0% | |
| TGTGGGACCGCAGATATAAT+TGG | - | chr2.4:49729326-49729345 | None:intergenic | 45.0% | |
| TTAGGCCGGCCCTAATAATA+AGG | - | chr2.4:49726138-49726157 | None:intergenic | 45.0% | |
| TTATAGGGTGGGTGGAGATT+TGG | + | chr2.4:49728552-49728571 | MS.gene025171:intron | 45.0% | |
| TTATTATTAGGGCCGGCCTA+AGG | + | chr2.4:49726137-49726156 | MS.gene025171:intron | 45.0% | |
| ! | AGCTACATCGATGATGGTTG+TGG | - | chr2.4:49727702-49727721 | None:intergenic | 45.0% |
| ! | CAACCAATTCGAGTTTCGGA+AGG | - | chr2.4:49727793-49727812 | None:intergenic | 45.0% |
| ! | CACTCAGAGATGCATTGGTA+AGG | + | chr2.4:49724807-49724826 | MS.gene025171:intron | 45.0% |
| ! | CAGAGATGCATTGGTAAGGA+TGG | + | chr2.4:49724811-49724830 | MS.gene025171:intron | 45.0% |
| ! | CAGGGATGGGTATAGTTTGT+GGG | + | chr2.4:49728338-49728357 | MS.gene025171:intron | 45.0% |
| ! | GATGGGTATAGTTTGTGGGT+GGG | + | chr2.4:49728342-49728361 | MS.gene025171:intron | 45.0% |
| ! | GCGCTGGGGTTAGATTTTTA+TGG | + | chr2.4:49728221-49728240 | MS.gene025171:intron | 45.0% |
| ! | GGGTAGTCTTGAAGTCAAAC+AGG | + | chr2.4:49728171-49728190 | MS.gene025171:intron | 45.0% |
| ! | GTGACTCCTGTTTTCACTCT+TGG | - | chr2.4:49726069-49726088 | None:intergenic | 45.0% |
| ! | TGGGATTAGCAGTGGAGATT+AGG | + | chr2.4:49728524-49728543 | MS.gene025171:intron | 45.0% |
| !! | AATACTGGTTCACCCAATGC+GGG | - | chr2.4:49726091-49726110 | None:intergenic | 45.0% |
| !! | CTGATTCACCTGGCCTTAAA+CGG | - | chr2.4:49725418-49725437 | None:intergenic | 45.0% |
| !! | CTTCCACCGGTTTACACAAT+TGG | + | chr2.4:49728025-49728044 | MS.gene025171:intron | 45.0% |
| !!! | GGTTTTTGAAACGGACTGCA+GGG | + | chr2.4:49728320-49728339 | MS.gene025171:intron | 45.0% |
| !!! | TACCTGTGCCTGTTTTTGTG+AGG | - | chr2.4:49727649-49727668 | None:intergenic | 45.0% |
| !!! | TTAGAAAAATATATTTTTAA+AGG | + | chr2.4:49726368-49726387 | MS.gene025171:intron | 5.0% |
| AAAACAGGAGTCACCCGCAT+TGG | + | chr2.4:49726075-49726094 | MS.gene025171:intron | 50.0% | |
| AAACAGGAGTCACCCGCATT+GGG | + | chr2.4:49726076-49726095 | MS.gene025171:intron | 50.0% | |
| AAGAGTTGGGGTTCGAACTC+CGG | + | chr2.4:49724200-49724219 | MS.gene025171:intron | 50.0% | |
| ACCGTGAACCTTCGACTTTC+TGG | - | chr2.4:49729161-49729180 | None:intergenic | 50.0% | |
| ACGGCAGTGATGAGATTAGG+AGG | + | chr2.4:49728617-49728636 | MS.gene025171:intron | 50.0% | |
| AGAGAGTTGAGGGTGGTGTT+TGG | - | chr2.4:49727423-49727442 | None:intergenic | 50.0% | |
| AGGTTGGATTATAGGGTGGG+TGG | + | chr2.4:49728544-49728563 | MS.gene025171:intron | 50.0% | |
| CAAATCCACCCACTGCCTTA+TGG | - | chr2.4:49728390-49728409 | None:intergenic | 50.0% | |
| CACCTAACACCTCTGCGAAT+AGG | - | chr2.4:49726001-49726020 | None:intergenic | 50.0% | |
| CCACCTTCCGAAACTCGAAT+TGG | + | chr2.4:49727787-49727806 | MS.gene025171:intron | 50.0% | |
| CCAGGTGAATCAGGTATGCT+AGG | + | chr2.4:49725425-49725444 | MS.gene025171:intron | 50.0% | |
| CCGAAGAAGACGCTTATTCG+TGG | + | chr2.4:49727897-49727916 | MS.gene025171:intron | 50.0% | |
| CCTAGCATACCTGATTCACC+TGG | - | chr2.4:49725428-49725447 | None:intergenic | 50.0% | |
| CGATATTGATCGGGTGTAGG+AGG | - | chr2.4:49727557-49727576 | None:intergenic | 50.0% | |
| CGTGAATCCAAGGAAACTCG+CGG | - | chr2.4:49727765-49727784 | None:intergenic | 50.0% | |
| CTCCTCGACCTCACAAAAAC+AGG | + | chr2.4:49727638-49727657 | MS.gene025171:intron | 50.0% | |
| GACCTCACAAAAACAGGCAC+AGG | + | chr2.4:49727644-49727663 | MS.gene025171:intron | 50.0% | |
| GACGCAAAGAAGAGGTAGCA+AGG | - | chr2.4:49727740-49727759 | None:intergenic | 50.0% | |
| GAGGGTGGTGTTTGGTTAGA+TGG | - | chr2.4:49727415-49727434 | None:intergenic | 50.0% | |
| GATTGAAGCGTAAGCTGGCA+AGG | + | chr2.4:49725547-49725566 | MS.gene025171:CDS | 50.0% | |
| GCAGGGATGGGTATAGTTTG+TGG | + | chr2.4:49728337-49728356 | MS.gene025171:intron | 50.0% | |
| GCCACCGGGAAGTTTAAAGA+TGG | - | chr2.4:49725396-49725415 | None:intergenic | 50.0% | |
| GTGAATCCAAGGAAACTCGC+GGG | - | chr2.4:49727764-49727783 | None:intergenic | 50.0% | |
| TACGGCTTCCAGAAAGTCGA+AGG | + | chr2.4:49729150-49729169 | MS.gene025171:CDS | 50.0% | |
| TGTGCTTGCGGATGAATGGT+TGG | + | chr2.4:49724667-49724686 | MS.gene025171:intron | 50.0% | |
| TTTGCAGCCTCTTGCTTCTG+TGG | + | chr2.4:49728126-49728145 | MS.gene025171:intron | 50.0% | |
| ! | CCAATTCGAGTTTCGGAAGG+TGG | - | chr2.4:49727790-49727809 | None:intergenic | 50.0% |
| ! | CGTTTAAGGCCAGGTGAATC+AGG | + | chr2.4:49725416-49725435 | MS.gene025171:CDS | 50.0% |
| ! | GACTTTCTGGAAGCCGTACA+AGG | - | chr2.4:49729148-49729167 | None:intergenic | 50.0% |
| ! | GGATGAATGGTTGGTCACAC+AGG | + | chr2.4:49724676-49724695 | MS.gene025171:intron | 50.0% |
| ! | GGATGGGTATAGTTTGTGGG+TGG | + | chr2.4:49728341-49728360 | MS.gene025171:intron | 50.0% |
| ! | GGGTGGAACTTTTAGATGGG+TGG | - | chr2.4:49727130-49727149 | None:intergenic | 50.0% |
| ! | GGTGGATTTGTGTCGCATTG+TGG | + | chr2.4:49728400-49728419 | MS.gene025171:intron | 50.0% |
| !! | ATTCGCAGAGGTGTTAGGTG+CGG | + | chr2.4:49726001-49726020 | MS.gene025171:intron | 50.0% |
| !! | CGATGGATTGAAGCGTAAGC+TGG | + | chr2.4:49725542-49725561 | MS.gene025171:CDS | 50.0% |
| !! | GGCCTCTTAATCTTTAGGGC+CGG | + | chr2.4:49726413-49726432 | MS.gene025171:intron | 50.0% |
| !! | TCCCTATTCGCAGAGGTGTT+AGG | + | chr2.4:49725996-49726015 | MS.gene025171:intron | 50.0% |
| !! | TTGAAACGGACTGCAGGGAT+GGG | + | chr2.4:49728325-49728344 | MS.gene025171:intron | 50.0% |
| !! | TTTGAAACGGACTGCAGGGA+TGG | + | chr2.4:49728324-49728343 | MS.gene025171:intron | 50.0% |
| !!! | GGGTTTTTGAAACGGACTGC+AGG | + | chr2.4:49728319-49728338 | MS.gene025171:intron | 50.0% |
| !!! | TGCCTGTTTTTGTGAGGTCG+AGG | - | chr2.4:49727643-49727662 | None:intergenic | 50.0% |
| AACTTCCCGGTGGCCGTTTA+AGG | + | chr2.4:49725402-49725421 | MS.gene025171:CDS | 55.0% | |
| AATCTCTTGGGTCCGCTGAC+TGG | - | chr2.4:49728270-49728289 | None:intergenic | 55.0% | |
| AGCCGAATGGGATCCAAACC+CGG | + | chr2.4:49728072-49728091 | MS.gene025171:intron | 55.0% | |
| ATCGGGTGTAGGAGGGTCTA+CGG | - | chr2.4:49727549-49727568 | None:intergenic | 55.0% | |
| CAGGTCTCCACCACATTCCA+AGG | - | chr2.4:49728975-49728994 | None:intergenic | 55.0% | |
| CGGAGGAAGAACGAGATTGG+AGG | - | chr2.4:49727496-49727515 | None:intergenic | 55.0% | |
| CTATTGGGCTTGAACGCGCT+GGG | + | chr2.4:49728206-49728225 | MS.gene025171:intron | 55.0% | |
| GAAACGGAGATTAGTGGCGG+AGG | - | chr2.4:49727513-49727532 | None:intergenic | 55.0% | |
| GAAGGTGGAGCGTGAATCCA+AGG | - | chr2.4:49727775-49727794 | None:intergenic | 55.0% | |
| GACCGGGTTTGGATCCCATT+CGG | - | chr2.4:49728077-49728096 | None:intergenic | 55.0% | |
| GAGGCCTAAAGCCCTTGCTT+GGG | - | chr2.4:49726172-49726191 | None:intergenic | 55.0% | |
| GCAACCCAAGCAAGGGCTTT+AGG | + | chr2.4:49726165-49726184 | MS.gene025171:intron | 55.0% | |
| GGCCCAATTGTGTAAACCGG+TGG | - | chr2.4:49728031-49728050 | None:intergenic | 55.0% | |
| GGCCGGCCCTAAAGATTAAG+AGG | - | chr2.4:49726418-49726437 | None:intergenic | 55.0% | |
| TATTGGGCTTGAACGCGCTG+GGG | + | chr2.4:49728207-49728226 | MS.gene025171:intron | 55.0% | |
| TGAGGCCTAAAGCCCTTGCT+TGG | - | chr2.4:49726173-49726192 | None:intergenic | 55.0% | |
| TGCCTTATGGGCCAACACCT+TGG | - | chr2.4:49728377-49728396 | None:intergenic | 55.0% | |
| TGGCGGAGGAAGAACGAGAT+TGG | - | chr2.4:49727499-49727518 | None:intergenic | 55.0% | |
| TGGTTGCAGAGAGTTGAGGG+TGG | - | chr2.4:49727430-49727449 | None:intergenic | 55.0% | |
| TGTGTCCATCGGGACTCACA+GGG | + | chr2.4:49724948-49724967 | MS.gene025171:intron | 55.0% | |
| TTAAGCCCTGTGAGTCCCGA+TGG | - | chr2.4:49724956-49724975 | None:intergenic | 55.0% | |
| TTGTGTCCATCGGGACTCAC+AGG | + | chr2.4:49724947-49724966 | MS.gene025171:intron | 55.0% | |
| ! | AAGCCCTTGCTTGGGTTGCT+TGG | - | chr2.4:49726164-49726183 | None:intergenic | 55.0% |
| ! | ATCTCTTGGGTCCGCTGACT+GGG | - | chr2.4:49728269-49728288 | None:intergenic | 55.0% |
| ! | GTGTTGGCCCATAAGGCAGT+GGG | + | chr2.4:49728379-49728398 | MS.gene025171:intron | 55.0% |
| !! | AGCCAAGGTGTTGGCCCATA+AGG | + | chr2.4:49728372-49728391 | MS.gene025171:intron | 55.0% |
| !! | ATTTAGGTGGGGGAGTGCCT+TGG | + | chr2.4:49728955-49728974 | MS.gene025171:intron | 55.0% |
| AGGGCCAAGCAACCCAAGCA+AGG | + | chr2.4:49726157-49726176 | MS.gene025171:intron | 60.0% | |
| CGGCTGGGAGGTGGATGAAA+CGG | - | chr2.4:49727529-49727548 | None:intergenic | 60.0% | |
| GCTATTGGGCTTGAACGCGC+TGG | + | chr2.4:49728205-49728224 | MS.gene025171:intron | 60.0% | |
| GGCTTTACGTGGACCTCCGA+AGG | + | chr2.4:49728243-49728262 | MS.gene025171:intron | 60.0% | |
| GGGCCAAGCAACCCAAGCAA+GGG | + | chr2.4:49726158-49726177 | MS.gene025171:intron | 60.0% | |
| GGGTTTGGATCCCATTCGGC+TGG | - | chr2.4:49728073-49728092 | None:intergenic | 60.0% | |
| GGTCCCACAAGCCAAGGTGT+TGG | + | chr2.4:49728363-49728382 | MS.gene025171:intron | 60.0% | |
| GTGTAGGAGGGTCTACGGCT+GGG | - | chr2.4:49727544-49727563 | None:intergenic | 60.0% | |
| TACACCGGCCACGTGGCAAT+CGG | - | chr2.4:49728463-49728482 | None:intergenic | 60.0% | |
| TCGCGGGTGACGCAAAGAAG+AGG | - | chr2.4:49727748-49727767 | None:intergenic | 60.0% | |
| TTGGCCCATAAGGCAGTGGG+TGG | + | chr2.4:49728382-49728401 | MS.gene025171:intron | 60.0% | |
| ! | GCTTGGGTTGCTTGGCCCTT+AGG | - | chr2.4:49726156-49726175 | None:intergenic | 60.0% |
| ! | TGGGCCAACACCTTGGCTTG+TGG | - | chr2.4:49728370-49728389 | None:intergenic | 60.0% |
| !! | ACCTGGCCTTAAACGGCCAC+CGG | - | chr2.4:49725411-49725430 | None:intergenic | 60.0% |
| !! | ATGGTGTGCCGATTGCCACG+TGG | + | chr2.4:49728452-49728471 | MS.gene025171:intron | 60.0% |
| !! | GGGAGTGCCTTGGAATGTGG+TGG | + | chr2.4:49728965-49728984 | MS.gene025171:CDS | 60.0% |
| !! | GGGCCAACACCTTGGCTTGT+GGG | - | chr2.4:49728369-49728388 | None:intergenic | 60.0% |
| !! | GGGTGGAGATTTGGTGCAGG+CGG | + | chr2.4:49728561-49728580 | MS.gene025171:intron | 60.0% |
| !! | GGTGGGTGGAGATTTGGTGC+AGG | + | chr2.4:49728558-49728577 | MS.gene025171:intron | 60.0% |
| !! | GGTGTTGGCCCATAAGGCAG+TGG | + | chr2.4:49728378-49728397 | MS.gene025171:intron | 60.0% |
| !! | TGGGGGAGTGCCTTGGAATG+TGG | + | chr2.4:49728962-49728981 | MS.gene025171:CDS | 60.0% |
| ACCTCCGAAGGCCCAGTCAG+CGG | + | chr2.4:49728255-49728274 | MS.gene025171:intron | 65.0% | |
| CTCTGCATACACCGGCCACG+TGG | - | chr2.4:49728470-49728489 | None:intergenic | 65.0% | |
| GCGTCACCCGCGAGTTTCCT+TGG | + | chr2.4:49727755-49727774 | MS.gene025171:intron | 65.0% | |
| GGGTTGCTTGGCCCTTAGGC+CGG | - | chr2.4:49726152-49726171 | None:intergenic | 65.0% | |
| GGTGTAGGAGGGTCTACGGC+TGG | - | chr2.4:49727545-49727564 | None:intergenic | 65.0% | |
| TAGGAGGGTCTACGGCTGGG+AGG | - | chr2.4:49727541-49727560 | None:intergenic | 65.0% | |
| TGGGTGGGTCCCACAAGCCA+AGG | + | chr2.4:49728357-49728376 | MS.gene025171:intron | 65.0% | |
| !! | CCTGGCCTTAAACGGCCACC+GGG | - | chr2.4:49725410-49725429 | None:intergenic | 65.0% |
| !! | TGTGCCGATTGCCACGTGGC+CGG | + | chr2.4:49728456-49728475 | MS.gene025171:intron | 65.0% |
| GAGGGTCTACGGCTGGGAGG+TGG | - | chr2.4:49727538-49727557 | None:intergenic | 70.0% | |
| ! | CCCGGTGGCCGTTTAAGGCC+AGG | + | chr2.4:49725407-49725426 | MS.gene025171:CDS | 70.0% |
| ! | GGGTCCGCTGACTGGGCCTT+CGG | - | chr2.4:49728262-49728281 | None:intergenic | 70.0% |
| ! | TCCGCTGACTGGGCCTTCGG+AGG | - | chr2.4:49728259-49728278 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 49723763 | 49729385 | 49723763 | ID=MS.gene025171 |
| chr2.4 | mRNA | 49723763 | 49729385 | 49723763 | ID=MS.gene025171.t1;Parent=MS.gene025171 |
| chr2.4 | exon | 49723763 | 49723896 | 49723763 | ID=MS.gene025171.t1.exon1;Parent=MS.gene025171.t1 |
| chr2.4 | CDS | 49723763 | 49723896 | 49723763 | ID=cds.MS.gene025171.t1;Parent=MS.gene025171.t1 |
| chr2.4 | exon | 49724011 | 49724056 | 49724011 | ID=MS.gene025171.t1.exon2;Parent=MS.gene025171.t1 |
| chr2.4 | CDS | 49724011 | 49724056 | 49724011 | ID=cds.MS.gene025171.t1;Parent=MS.gene025171.t1 |
| chr2.4 | exon | 49725344 | 49725437 | 49725344 | ID=MS.gene025171.t1.exon3;Parent=MS.gene025171.t1 |
| chr2.4 | CDS | 49725344 | 49725437 | 49725344 | ID=cds.MS.gene025171.t1;Parent=MS.gene025171.t1 |
| chr2.4 | exon | 49725538 | 49725605 | 49725538 | ID=MS.gene025171.t1.exon4;Parent=MS.gene025171.t1 |
| chr2.4 | CDS | 49725538 | 49725605 | 49725538 | ID=cds.MS.gene025171.t1;Parent=MS.gene025171.t1 |
| chr2.4 | exon | 49728961 | 49729047 | 49728961 | ID=MS.gene025171.t1.exon5;Parent=MS.gene025171.t1 |
| chr2.4 | CDS | 49728961 | 49729047 | 49728961 | ID=cds.MS.gene025171.t1;Parent=MS.gene025171.t1 |
| chr2.4 | exon | 49729128 | 49729238 | 49729128 | ID=MS.gene025171.t1.exon6;Parent=MS.gene025171.t1 |
| chr2.4 | CDS | 49729128 | 49729238 | 49729128 | ID=cds.MS.gene025171.t1;Parent=MS.gene025171.t1 |
| chr2.4 | exon | 49729314 | 49729385 | 49729314 | ID=MS.gene025171.t1.exon7;Parent=MS.gene025171.t1 |
| chr2.4 | CDS | 49729314 | 49729385 | 49729314 | ID=cds.MS.gene025171.t1;Parent=MS.gene025171.t1 |
| Gene Sequence |
| Protein sequence |
