Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49076.t1 | XP_013469683.1 | 100 | 177 | 0 | 0 | 1 | 177 | 1 | 177 | 5.00E-100 | 373.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49076.t1 | Q8GXS3 | 89.3 | 177 | 19 | 0 | 1 | 177 | 1 | 177 | 1.0e-93 | 344.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49076.t1 | I3SXB4 | 100.0 | 177 | 0 | 0 | 1 | 177 | 1 | 177 | 3.6e-100 | 373.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49076 | MS.gene21679 | PPI |
| MS.gene49076 | MS.gene21951 | PPI |
| MS.gene49076 | MS.gene024701 | PPI |
| MS.gene49076 | MS.gene22519 | PPI |
| MS.gene025171 | MS.gene49076 | PPI |
| MS.gene49076 | MS.gene22289 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49076.t1 | MTR_1g100673 | 100.000 | 177 | 0 | 0 | 1 | 177 | 1 | 177 | 1.86e-132 | 369 |
| MS.gene49076.t1 | MTR_2g040570 | 50.467 | 107 | 46 | 3 | 7 | 112 | 17 | 117 | 8.76e-30 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49076.t1 | AT4G25550 | 89.266 | 177 | 19 | 0 | 1 | 177 | 1 | 177 | 3.61e-121 | 340 |
| MS.gene49076.t1 | AT4G29820 | 58.235 | 170 | 71 | 0 | 6 | 175 | 28 | 197 | 2.67e-70 | 212 |
Find 50 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACATTATAGTTTCAAAATT+TGG | 0.111915 | 1.3:+69556167 | None:intergenic |
| CCGAAGGTGTAGCTCGATAA+TGG | 0.326177 | 1.3:+69559579 | None:intergenic |
| GTTATATGAGGAGGACAGTA+TGG | 0.348606 | 1.3:+69556143 | None:intergenic |
| CATATTCTTCTTCTGCAAAT+CGG | 0.351829 | 1.3:-69556523 | MS.gene49076:CDS |
| CCTGGCTTGAGACGGCCGCC+TGG | 0.352635 | 1.3:+69556481 | None:intergenic |
| TTTCTCCATCTTAGGCTCCT+TGG | 0.355722 | 1.3:+69559554 | None:intergenic |
| ATATTCTTCTTCTGCAAATC+GGG | 0.410634 | 1.3:-69556522 | MS.gene49076:CDS |
| TGAACTCTATGACAATGTTC+AGG | 0.434805 | 1.3:-69555928 | MS.gene49076:intron |
| CTGGCTTGAGACGGCCGCCT+GGG | 0.436161 | 1.3:+69556482 | None:intergenic |
| CCTTGTTCACTTATCTGAAA+GGG | 0.439725 | 1.3:-69556000 | MS.gene49076:CDS |
| CCAGGCGGCCGTCTCAAGCC+AGG | 0.446518 | 1.3:-69556481 | MS.gene49076:CDS |
| TGTAATCATACCTGCCAGTC+AGG | 0.447945 | 1.3:+69556299 | None:intergenic |
| TTGTATGTTTACAGAAATTG+AGG | 0.449117 | 1.3:-69556375 | MS.gene49076:intron |
| CGAAGGTGTAGCTCGATAAT+GGG | 0.452400 | 1.3:+69559580 | None:intergenic |
| GAGGTATCTTTCTCCATCTT+AGG | 0.484631 | 1.3:+69559546 | None:intergenic |
| CAGGCGGCCGTCTCAAGCCA+GGG | 0.484829 | 1.3:-69556480 | MS.gene49076:CDS |
| CGTCTCAAGCCAGGGGAGAA+TGG | 0.493218 | 1.3:-69556472 | MS.gene49076:intron |
| TCCTTGTTCACTTATCTGAA+AGG | 0.498741 | 1.3:-69556001 | MS.gene49076:CDS |
| AGAAAATTGACTAGCAAGCT+TGG | 0.501691 | 1.3:-69556344 | MS.gene49076:CDS |
| CTTAGGCTCCTTGGTTCCGA+AGG | 0.509164 | 1.3:+69559563 | None:intergenic |
| CGGCCTTGTACCTGACTGGC+AGG | 0.509791 | 1.3:-69556309 | MS.gene49076:intron |
| TGCCAGTCAGGTACAAGGCC+GGG | 0.510170 | 1.3:+69556311 | None:intergenic |
| CGGAACCAAGGAGCCTAAGA+TGG | 0.520178 | 1.3:-69559559 | MS.gene49076:CDS |
| AACTTCAGTTATATGAAAGA+AGG | 0.526771 | 1.3:-69558422 | MS.gene49076:intron |
| GGAATGAGGACCAGCGTGGA+AGG | 0.530721 | 1.3:-69558401 | MS.gene49076:CDS |
| ATTTGCAGAAGAAGAATATG+AGG | 0.532812 | 1.3:+69556526 | None:intergenic |
| TAGGTGAATGTGTTGCAATC+TGG | 0.534479 | 1.3:-69556196 | MS.gene49076:CDS |
| AAGATCTTACCATTCTCCCC+TGG | 0.548421 | 1.3:+69556463 | None:intergenic |
| TGTATGTTTACAGAAATTGA+GGG | 0.552205 | 1.3:-69556374 | MS.gene49076:intron |
| CCCTTTCAGATAAGTGAACA+AGG | 0.554396 | 1.3:+69556000 | None:intergenic |
| CCATTATCGAGCTACACCTT+CGG | 0.557502 | 1.3:-69559579 | MS.gene49076:CDS |
| CACCCGGCCTTGTACCTGAC+TGG | 0.560733 | 1.3:-69556313 | MS.gene49076:CDS |
| GAGAAAGATGATACCCTCTC+AGG | 0.560955 | 1.3:-69559616 | None:intergenic |
| CTGCCAGTCAGGTACAAGGC+CGG | 0.563251 | 1.3:+69556310 | None:intergenic |
| GTTATATGAAAGAAGGAATG+AGG | 0.564077 | 1.3:-69558415 | MS.gene49076:CDS |
| ATACCTGCCAGTCAGGTACA+AGG | 0.579704 | 1.3:+69556306 | None:intergenic |
| CATTCTCCCCTGGCTTGAGA+CGG | 0.592769 | 1.3:+69556473 | None:intergenic |
| TCCTCATATAACAAAACCCA+AGG | 0.593485 | 1.3:-69556132 | MS.gene49076:intron |
| AATGTGTTGCAATCTGGTGG+AGG | 0.600436 | 1.3:-69556190 | MS.gene49076:CDS |
| GTGAATGTGTTGCAATCTGG+TGG | 0.633660 | 1.3:-69556193 | MS.gene49076:CDS |
| TATGTGTTTACTACCTGAGA+GGG | 0.633947 | 1.3:+69559603 | None:intergenic |
| AAGCTTGGTGCTAATTCACC+CGG | 0.635284 | 1.3:-69556329 | MS.gene49076:CDS |
| AGCAAGACGATCAGCGACGG+AGG | 0.638191 | 1.3:+69559527 | None:intergenic |
| AGGCGGCCGTCTCAAGCCAG+GGG | 0.645996 | 1.3:-69556479 | MS.gene49076:CDS |
| CAGTAAAATTCCTTCCACGC+TGG | 0.660338 | 1.3:+69558391 | None:intergenic |
| ACGAGCAAGACGATCAGCGA+CGG | 0.664522 | 1.3:+69559524 | None:intergenic |
| GTATGTGTTTACTACCTGAG+AGG | 0.672150 | 1.3:+69559602 | None:intergenic |
| GAGCTACACCTTCGGAACCA+AGG | 0.674539 | 1.3:-69559571 | MS.gene49076:CDS |
| TTGTCATAGAGTTCAAACAA+TGG | 0.696073 | 1.3:+69555936 | None:intergenic |
| AGAAGGAATGAGGACCAGCG+TGG | 0.707171 | 1.3:-69558405 | MS.gene49076:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATAAACAATATATTATA+GGG | + | chr1.3:69556176-69556195 | None:intergenic | 10.0% |
| !! | TTACATAAACAATATATTAT+AGG | + | chr1.3:69556177-69556196 | None:intergenic | 10.0% |
| !!! | AATATGATAAAATTTTGTAT+TGG | + | chr1.3:69557435-69557454 | None:intergenic | 10.0% |
| !!! | ATATGATAAAATTTTGTATT+GGG | + | chr1.3:69557434-69557453 | None:intergenic | 10.0% |
| !! | AAATTCATTATATACTCAAA+TGG | - | chr1.3:69557008-69557027 | MS.gene49076:intron | 15.0% |
| !! | ATCGAATAAAATTAATCAAA+AGG | + | chr1.3:69556048-69556067 | None:intergenic | 15.0% |
| !! | GTCATATAAAATGTTTATAT+TGG | + | chr1.3:69556843-69556862 | None:intergenic | 15.0% |
| !! | TAAGATTACATCATTAAAAA+AGG | + | chr1.3:69557487-69557506 | None:intergenic | 15.0% |
| !! | TACATTATAGTTTCAAAATT+TGG | + | chr1.3:69559320-69559339 | None:intergenic | 15.0% |
| !! | TCGAATAAAATTAATCAAAA+GGG | + | chr1.3:69556047-69556066 | None:intergenic | 15.0% |
| !!! | ATAAAATTACATTTGAAGTT+TGG | + | chr1.3:69557156-69557175 | None:intergenic | 15.0% |
| !!! | TAAAAAGTGTAAAAACTAAA+TGG | + | chr1.3:69558814-69558833 | None:intergenic | 15.0% |
| !!! | TAAAATTACATTTGAAGTTT+GGG | + | chr1.3:69557155-69557174 | None:intergenic | 15.0% |
| !!! | TCTATAATTCTATTTTAGAT+TGG | - | chr1.3:69558495-69558514 | MS.gene49076:intron | 15.0% |
| !!! | TTATATTTTAGTTTGTTGAA+GGG | - | chr1.3:69558362-69558381 | MS.gene49076:intron | 15.0% |
| !!! | TTTATATTTTAGTTTGTTGA+AGG | - | chr1.3:69558361-69558380 | MS.gene49076:intron | 15.0% |
| !! | AAGTAAAAAGATTATATGAG+AGG | + | chr1.3:69556965-69556984 | None:intergenic | 20.0% |
| !! | TATTAGTAAAATTGGGAATT+GGG | + | chr1.3:69556109-69556128 | None:intergenic | 20.0% |
| !!! | AAAATTACATTTGAAGTTTG+GGG | + | chr1.3:69557154-69557173 | None:intergenic | 20.0% |
| !!! | AAATAAAGCCATATAACTTT+TGG | + | chr1.3:69556774-69556793 | None:intergenic | 20.0% |
| !!! | AATAAAGCCATATAACTTTT+GGG | + | chr1.3:69556773-69556792 | None:intergenic | 20.0% |
| !!! | ACATACAAAAAAAGTACATT+TGG | + | chr1.3:69559097-69559116 | None:intergenic | 20.0% |
| !!! | AGTAGAGTATTAGTAAAATT+GGG | + | chr1.3:69556116-69556135 | None:intergenic | 20.0% |
| ! | AAACCTATAGATAAACTTTG+GGG | + | chr1.3:69557639-69557658 | None:intergenic | 25.0% |
| ! | AACTTCAGTTATATGAAAGA+AGG | - | chr1.3:69557062-69557081 | MS.gene49076:intron | 25.0% |
| ! | ACAAACCTATAGATAAACTT+TGG | + | chr1.3:69557641-69557660 | None:intergenic | 25.0% |
| ! | AGTTTATCTATAGGTTTGTA+CGG | - | chr1.3:69557642-69557661 | MS.gene49076:intron | 25.0% |
| ! | ATATATTAAAGTTGCATGCT+AGG | + | chr1.3:69557965-69557984 | None:intergenic | 25.0% |
| ! | ATCAATTTACCTTATTGTGA+AGG | + | chr1.3:69558327-69558346 | None:intergenic | 25.0% |
| ! | ATGTTCTCTACAGAAATAAT+AGG | + | chr1.3:69558862-69558881 | None:intergenic | 25.0% |
| ! | ATTAGTAAAATTGGGAATTG+GGG | + | chr1.3:69556108-69556127 | None:intergenic | 25.0% |
| ! | ATTATATACTCAAATGGTTC+TGG | - | chr1.3:69557014-69557033 | MS.gene49076:intron | 25.0% |
| ! | CAAACCTATAGATAAACTTT+GGG | + | chr1.3:69557640-69557659 | None:intergenic | 25.0% |
| ! | CTTCATTTATCTGAATTGAA+GGG | - | chr1.3:69557882-69557901 | MS.gene49076:intron | 25.0% |
| ! | GTATTAGTAAAATTGGGAAT+TGG | + | chr1.3:69556110-69556129 | None:intergenic | 25.0% |
| ! | TACATCATTAAAAAAGGTAG+AGG | + | chr1.3:69557481-69557500 | None:intergenic | 25.0% |
| ! | TATACTATACCACAGTATTA+TGG | + | chr1.3:69557786-69557805 | None:intergenic | 25.0% |
| ! | TATTATGGTTTAAGAACCTT+GGG | + | chr1.3:69557771-69557790 | None:intergenic | 25.0% |
| ! | TATTTGCAGACTATCATATT+CGG | + | chr1.3:69559058-69559077 | None:intergenic | 25.0% |
| ! | TCCACTAACTACTATTAATA+CGG | + | chr1.3:69558097-69558116 | None:intergenic | 25.0% |
| ! | TCTTCATTTATCTGAATTGA+AGG | - | chr1.3:69557881-69557900 | MS.gene49076:intron | 25.0% |
| ! | TCTTTCATATAACTGAAGTT+TGG | + | chr1.3:69557062-69557081 | None:intergenic | 25.0% |
| ! | TGTATGTTTACAGAAATTGA+GGG | - | chr1.3:69559110-69559129 | MS.gene49076:intron | 25.0% |
| ! | TTACTAACCAAAACAACTAA+TGG | + | chr1.3:69558452-69558471 | None:intergenic | 25.0% |
| ! | TTCCTCTACTTCTAATTAAA+GGG | - | chr1.3:69557349-69557368 | MS.gene49076:intron | 25.0% |
| ! | TTGTATGTTTACAGAAATTG+AGG | - | chr1.3:69559109-69559128 | MS.gene49076:intron | 25.0% |
| ! | TTTCCTCTACTTCTAATTAA+AGG | - | chr1.3:69557348-69557367 | MS.gene49076:intron | 25.0% |
| !! | AAATTACATTTGAAGTTTGG+GGG | + | chr1.3:69557153-69557172 | None:intergenic | 25.0% |
| !! | ATAAAGCCATATAACTTTTG+GGG | + | chr1.3:69556772-69556791 | None:intergenic | 25.0% |
| !! | ATAGGTATTCAGAAATTTTC+TGG | - | chr1.3:69556539-69556558 | MS.gene49076:CDS | 25.0% |
| !! | ATGCAATAAAGGTATATTAG+TGG | - | chr1.3:69558135-69558154 | MS.gene49076:intron | 25.0% |
| !! | CAGTAGAGTATTAGTAAAAT+TGG | + | chr1.3:69556117-69556136 | None:intergenic | 25.0% |
| !! | CTTTGTACTTGATTTGATAT+GGG | - | chr1.3:69556267-69556286 | MS.gene49076:intron | 25.0% |
| !! | GAAGAAAAATGTTAGTTTAG+AGG | + | chr1.3:69557823-69557842 | None:intergenic | 25.0% |
| !! | TGATAAAATTTTGTATTGGG+AGG | + | chr1.3:69557431-69557450 | None:intergenic | 25.0% |
| !! | TTCAAGTTTAGAAAAAACTG+TGG | - | chr1.3:69556492-69556511 | MS.gene49076:CDS | 25.0% |
| !!! | ACAGTTTTTTCTAAACTTGA+AGG | + | chr1.3:69556493-69556512 | None:intergenic | 25.0% |
| !!! | GCTTTATGCTTTATTTTTGT+AGG | - | chr1.3:69558918-69558937 | MS.gene49076:intron | 25.0% |
| !!! | TTCTATTTTAGATTGGATAG+TGG | - | chr1.3:69558502-69558521 | MS.gene49076:intron | 25.0% |
| AAAAGGTGAAAAGACATAGA+TGG | + | chr1.3:69557224-69557243 | None:intergenic | 30.0% | |
| AATAATAGGACAGGACATTA+TGG | + | chr1.3:69558848-69558867 | None:intergenic | 30.0% | |
| AGACAAACTCAATGTGTATA+TGG | + | chr1.3:69556805-69556824 | None:intergenic | 30.0% | |
| ATAATAGGACAGGACATTAT+GGG | + | chr1.3:69558847-69558866 | None:intergenic | 30.0% | |
| ATATTCTTCTTCTGCAAATC+GGG | - | chr1.3:69558962-69558981 | MS.gene49076:intron | 30.0% | |
| ATCCCTTTAATTAGAAGTAG+AGG | + | chr1.3:69557354-69557373 | None:intergenic | 30.0% | |
| ATCTAGTAATCCATTTCCTA+AGG | - | chr1.3:69558298-69558317 | MS.gene49076:intron | 30.0% | |
| ATGATTGATGAAAGAGTAAG+AGG | + | chr1.3:69556521-69556540 | None:intergenic | 30.0% | |
| ATTTGCAGAAGAAGAATATG+AGG | + | chr1.3:69558961-69558980 | None:intergenic | 30.0% | |
| CAAGAAACTAAATCTCTTGA+TGG | + | chr1.3:69556646-69556665 | None:intergenic | 30.0% | |
| CAGAGATAATAATGCTACAA+TGG | + | chr1.3:69557539-69557558 | None:intergenic | 30.0% | |
| CATATTCTTCTTCTGCAAAT+CGG | - | chr1.3:69558961-69558980 | MS.gene49076:intron | 30.0% | |
| CCACTAACTACTATTAATAC+GGG | + | chr1.3:69558096-69558115 | None:intergenic | 30.0% | |
| CCATATCAAATCAAGTACAA+AGG | + | chr1.3:69556269-69556288 | None:intergenic | 30.0% | |
| CTTACTCTTTCATCAATCAT+AGG | - | chr1.3:69556521-69556540 | MS.gene49076:CDS | 30.0% | |
| GAAACGTATTACACAAAACA+AGG | - | chr1.3:69556415-69556434 | MS.gene49076:intron | 30.0% | |
| GGTGAAATAGAGGAATATTT+CGG | + | chr1.3:69557690-69557709 | None:intergenic | 30.0% | |
| GTAGGCATATCCTTAAAAAA+GGG | + | chr1.3:69558678-69558697 | None:intergenic | 30.0% | |
| GTATTATGGTTTAAGAACCT+TGG | + | chr1.3:69557772-69557791 | None:intergenic | 30.0% | |
| GTTAGTAATGAAGAGTTTGA+CGG | - | chr1.3:69558464-69558483 | MS.gene49076:intron | 30.0% | |
| GTTATATGAAAGAAGGAATG+AGG | - | chr1.3:69557069-69557088 | MS.gene49076:intron | 30.0% | |
| GTTCTTAAACCATAATACTG+TGG | - | chr1.3:69557774-69557793 | MS.gene49076:intron | 30.0% | |
| TCCATTAATATCTTCTATGC+AGG | - | chr1.3:69559445-69559464 | MS.gene49076:intron | 30.0% | |
| TCCTGCATAGAAGATATTAA+TGG | + | chr1.3:69559449-69559468 | None:intergenic | 30.0% | |
| TGATTGATGAAAGAGTAAGA+GGG | + | chr1.3:69556520-69556539 | None:intergenic | 30.0% | |
| TGCATTCTGTATACTGTATT+TGG | - | chr1.3:69557856-69557875 | MS.gene49076:intron | 30.0% | |
| TGTACAAATGGATAGATAGA+GGG | + | chr1.3:69557742-69557761 | None:intergenic | 30.0% | |
| TGTAGGCATATCCTTAAAAA+AGG | + | chr1.3:69558679-69558698 | None:intergenic | 30.0% | |
| TGTTGATCTTACTTTCTTGT+TGG | - | chr1.3:69557562-69557581 | MS.gene49076:intron | 30.0% | |
| TTAAACCATCAAGAAAGAAC+TGG | + | chr1.3:69557319-69557338 | None:intergenic | 30.0% | |
| TTGTACAAATGGATAGATAG+AGG | + | chr1.3:69557743-69557762 | None:intergenic | 30.0% | |
| TTGTCATAGAGTTCAAACAA+TGG | + | chr1.3:69559551-69559570 | None:intergenic | 30.0% | |
| ! | AAAGTACCCCAAAAGTTATA+TGG | - | chr1.3:69556763-69556782 | MS.gene49076:intron | 30.0% |
| ! | AAATGTTAGTTTAGAGGTGA+AGG | + | chr1.3:69557817-69557836 | None:intergenic | 30.0% |
| ! | AAGGCACTAAAAAAGAGTAT+CGG | + | chr1.3:69556328-69556347 | None:intergenic | 30.0% |
| ! | AATTACATTTGAAGTTTGGG+GGG | + | chr1.3:69557152-69557171 | None:intergenic | 30.0% |
| ! | AATTTTATTCGATCGCTTCT+GGG | - | chr1.3:69556055-69556074 | MS.gene49076:intron | 30.0% |
| ! | ATATCATCGAAACAGGTTTT+CGG | + | chr1.3:69556464-69556483 | None:intergenic | 30.0% |
| ! | CCTTTGTACTTGATTTGATA+TGG | - | chr1.3:69556266-69556285 | MS.gene49076:intron | 30.0% |
| ! | CTAACGATTTTCATGTGTTT+TGG | + | chr1.3:69556873-69556892 | None:intergenic | 30.0% |
| ! | GATAATTTGTCTTGTAGACA+TGG | - | chr1.3:69556906-69556925 | MS.gene49076:intron | 30.0% |
| ! | TAATTTTATTCGATCGCTTC+TGG | - | chr1.3:69556054-69556073 | MS.gene49076:intron | 30.0% |
| !!! | GTTTTTTCTAAACTTGAAGG+AGG | + | chr1.3:69556490-69556509 | None:intergenic | 30.0% |
| AACAGAAGTTGTGTTAGAAG+TGG | + | chr1.3:69556709-69556728 | None:intergenic | 35.0% | |
| AAGTTTAGCATGAAACTGGT+TGG | + | chr1.3:69558784-69558803 | None:intergenic | 35.0% | |
| AATCTCTTGATGGAAGTTTG+AGG | + | chr1.3:69556636-69556655 | None:intergenic | 35.0% | |
| AATGAAGAGTTTGACGGTAT+GGG | - | chr1.3:69558470-69558489 | MS.gene49076:intron | 35.0% | |
| AATGAATTTGAGCATCACAC+AGG | + | chr1.3:69556997-69557016 | None:intergenic | 35.0% | |
| ACAGAAGTTGTGTTAGAAGT+GGG | + | chr1.3:69556708-69556727 | None:intergenic | 35.0% | |
| AGAAAATTGACTAGCAAGCT+TGG | - | chr1.3:69559140-69559159 | MS.gene49076:intron | 35.0% | |
| AGACACATAATATGAGACAG+AGG | - | chr1.3:69558229-69558248 | MS.gene49076:intron | 35.0% | |
| AGTGTAAAAACTAAATGGCC+AGG | + | chr1.3:69558809-69558828 | None:intergenic | 35.0% | |
| AGTTTAGCATGAAACTGGTT+GGG | + | chr1.3:69558783-69558802 | None:intergenic | 35.0% | |
| ATAATGCTACAATGGATGAG+TGG | + | chr1.3:69557531-69557550 | None:intergenic | 35.0% | |
| ATTCCCATCACAAATTACCT+TGG | + | chr1.3:69559372-69559391 | None:intergenic | 35.0% | |
| ATTTATCTGAATTGAAGGGC+TGG | - | chr1.3:69557886-69557905 | MS.gene49076:intron | 35.0% | |
| CATTTGGATCGGTTAAATGA+AGG | + | chr1.3:69556347-69556366 | None:intergenic | 35.0% | |
| CATTTGTACAATTTGACCCA+AGG | - | chr1.3:69557752-69557771 | MS.gene49076:intron | 35.0% | |
| CCCGTATTAATAGTAGTTAG+TGG | - | chr1.3:69558093-69558112 | MS.gene49076:intron | 35.0% | |
| CCTTGTTCACTTATCTGAAA+GGG | - | chr1.3:69559484-69559503 | MS.gene49076:intron | 35.0% | |
| CGGAATTTATGGAGCAAATA+TGG | - | chr1.3:69558392-69558411 | MS.gene49076:CDS | 35.0% | |
| CTAAGGTAACCTTCACAATA+AGG | - | chr1.3:69558315-69558334 | MS.gene49076:intron | 35.0% | |
| CTCTACAGAAATAATAGGAC+AGG | + | chr1.3:69558857-69558876 | None:intergenic | 35.0% | |
| CTTATTGTGAAGGTTACCTT+AGG | + | chr1.3:69558317-69558336 | None:intergenic | 35.0% | |
| CTTGGGTCAAATTGTACAAA+TGG | + | chr1.3:69557754-69557773 | None:intergenic | 35.0% | |
| GACACATAATATGAGACAGA+GGG | - | chr1.3:69558230-69558249 | MS.gene49076:intron | 35.0% | |
| GCTTGCAGTAAAATTCTATG+AGG | - | chr1.3:69558414-69558433 | MS.gene49076:CDS | 35.0% | |
| TAAAGCATAAAGCTGAGACA+TGG | + | chr1.3:69558911-69558930 | None:intergenic | 35.0% | |
| TAACTCCAGTTCTTTCTTGA+TGG | - | chr1.3:69557311-69557330 | MS.gene49076:intron | 35.0% | |
| TAAGCATACACCAATAGAAC+TGG | + | chr1.3:69559420-69559439 | None:intergenic | 35.0% | |
| TAATGAAGAGTTTGACGGTA+TGG | - | chr1.3:69558469-69558488 | MS.gene49076:intron | 35.0% | |
| TATGTGTTTACTACCTGAGA+GGG | + | chr1.3:69555884-69555903 | None:intergenic | 35.0% | |
| TCCTCATATAACAAAACCCA+AGG | - | chr1.3:69559352-69559371 | MS.gene49076:intron | 35.0% | |
| TCCTTGTTCACTTATCTGAA+AGG | - | chr1.3:69559483-69559502 | MS.gene49076:intron | 35.0% | |
| TCTATGACAATGTTCAGGTA+CGG | - | chr1.3:69559561-69559580 | MS.gene49076:CDS | 35.0% | |
| TCTTGTATTGCCAGTTCTAT+TGG | - | chr1.3:69559407-69559426 | MS.gene49076:intron | 35.0% | |
| TGAACTCTATGACAATGTTC+AGG | - | chr1.3:69559556-69559575 | MS.gene49076:CDS | 35.0% | |
| TGCAAGCATCTCATTTAAGT+TGG | - | chr1.3:69558001-69558020 | MS.gene49076:intron | 35.0% | |
| TTCCCATCACAAATTACCTT+GGG | + | chr1.3:69559371-69559390 | None:intergenic | 35.0% | |
| TTGCCCCAAAGTTTATCTAT+AGG | - | chr1.3:69557633-69557652 | MS.gene49076:intron | 35.0% | |
| ! | AAACCCAAGGTAATTTGTGA+TGG | - | chr1.3:69559365-69559384 | MS.gene49076:intron | 35.0% |
| ! | AACCCAAGGTAATTTGTGAT+GGG | - | chr1.3:69559366-69559385 | MS.gene49076:intron | 35.0% |
| ! | AACTGGTTGGGTTTGTTTAA+AGG | + | chr1.3:69558771-69558790 | None:intergenic | 35.0% |
| ! | ACTGGTTGGGTTTGTTTAAA+GGG | + | chr1.3:69558770-69558789 | None:intergenic | 35.0% |
| ! | ATATCCTTAAAAAAGGGCGT+GGG | + | chr1.3:69558672-69558691 | None:intergenic | 35.0% |
| ! | CTATGTCTTTTCACCTTTTG+CGG | - | chr1.3:69557225-69557244 | MS.gene49076:intron | 35.0% |
| ! | GCAAGCATCTCATTTAAGTT+GGG | - | chr1.3:69558002-69558021 | MS.gene49076:intron | 35.0% |
| ! | TAAAGGGGAGTTTTCCATTA+TGG | + | chr1.3:69558754-69558773 | None:intergenic | 35.0% |
| ! | TATCATCGAAACAGGTTTTC+GGG | + | chr1.3:69556463-69556482 | None:intergenic | 35.0% |
| ! | TCATATGTGTTGTTGCTGTT+AGG | - | chr1.3:69556371-69556390 | MS.gene49076:intron | 35.0% |
| !! | AAATGGATTACTAGATGTGC+TGG | + | chr1.3:69558294-69558313 | None:intergenic | 35.0% |
| !!! | ACCTTGGGTTTTGTTATATG+AGG | + | chr1.3:69559356-69559375 | None:intergenic | 35.0% |
| !!! | AGCAAGCAGTTTCAAGTTTT+TGG | + | chr1.3:69559525-69559544 | None:intergenic | 35.0% |
| !!! | GCAAGCAGTTTCAAGTTTTT+GGG | + | chr1.3:69559524-69559543 | None:intergenic | 35.0% |
| !!! | TTGGGTTTTGTTATATGAGG+AGG | + | chr1.3:69559353-69559372 | None:intergenic | 35.0% |
| AACAACTAATGGCCAATCGT+CGG | + | chr1.3:69558441-69558460 | None:intergenic | 40.0% | |
| AAGACTCTCCCTCTCAAAAT+GGG | + | chr1.3:69558587-69558606 | None:intergenic | 40.0% | |
| AAGTTGTGTTAGAAGTGGGA+TGG | + | chr1.3:69556704-69556723 | None:intergenic | 40.0% | |
| ACAATGTTCAGGTACGGTTA+CGG | - | chr1.3:69559567-69559586 | MS.gene49076:CDS | 40.0% | |
| ACCCACAAGTTTGAATCCTA+TGG | - | chr1.3:69557707-69557726 | MS.gene49076:intron | 40.0% | |
| AGCCATAGGATTCAAACTTG+TGG | + | chr1.3:69557712-69557731 | None:intergenic | 40.0% | |
| AGTTAGTGGAGTAGTTAGCT+GGG | - | chr1.3:69558107-69558126 | MS.gene49076:intron | 40.0% | |
| CAAACTTGTGGGTGAAATAG+AGG | + | chr1.3:69557700-69557719 | None:intergenic | 40.0% | |
| CAACACATATGAGCAGCATT+TGG | + | chr1.3:69556363-69556382 | None:intergenic | 40.0% | |
| CATATCCTTAAAAAAGGGCG+TGG | + | chr1.3:69558673-69558692 | None:intergenic | 40.0% | |
| CATATGAGCAGCATTTGGAT+CGG | + | chr1.3:69556358-69556377 | None:intergenic | 40.0% | |
| CCCTTTCAGATAAGTGAACA+AGG | + | chr1.3:69559487-69559506 | None:intergenic | 40.0% | |
| CTTGATGGAAGTTTGAGGAA+CGG | + | chr1.3:69556631-69556650 | None:intergenic | 40.0% | |
| GACATAGATGGTTGTGTATC+AGG | + | chr1.3:69557212-69557231 | None:intergenic | 40.0% | |
| GCCATAGGATTCAAACTTGT+GGG | + | chr1.3:69557711-69557730 | None:intergenic | 40.0% | |
| GGACAAGTTTAGCATGAAAC+TGG | + | chr1.3:69558788-69558807 | None:intergenic | 40.0% | |
| GTATGTGTTTACTACCTGAG+AGG | + | chr1.3:69555885-69555904 | None:intergenic | 40.0% | |
| GTGAAGGTTACCTTAGGAAA+TGG | + | chr1.3:69558311-69558330 | None:intergenic | 40.0% | |
| GTTATATGAGGAGGACAGTA+TGG | + | chr1.3:69559344-69559363 | None:intergenic | 40.0% | |
| GTTTCATGCTAAACTTGTCC+TGG | - | chr1.3:69558788-69558807 | MS.gene49076:intron | 40.0% | |
| TAGGTGAATGTGTTGCAATC+TGG | - | chr1.3:69559288-69559307 | MS.gene49076:intron | 40.0% | |
| TAGTTAGTGGAGTAGTTAGC+TGG | - | chr1.3:69558106-69558125 | MS.gene49076:intron | 40.0% | |
| TATGTACCTGATTCCGCAAA+AGG | + | chr1.3:69557241-69557260 | None:intergenic | 40.0% | |
| TGTTTGCATGCACTTATCCT+TGG | - | chr1.3:69559254-69559273 | MS.gene49076:intron | 40.0% | |
| TTAAAGTTGCATGCTAGGAG+AGG | + | chr1.3:69557960-69557979 | None:intergenic | 40.0% | |
| ! | AACACATTTTGCAAACTCCC+AGG | - | chr1.3:69558985-69559004 | MS.gene49076:intron | 40.0% |
| ! | ACTAAGGCTCCCATTGTTTT+GGG | + | chr1.3:69558636-69558655 | None:intergenic | 40.0% |
| ! | AGAAGCATGTGTAGCTCATA+TGG | + | chr1.3:69557382-69557401 | None:intergenic | 40.0% |
| ! | ATTGGGAATTGGGGTTTTCT+AGG | + | chr1.3:69556099-69556118 | None:intergenic | 40.0% |
| ! | CAGAATGCAAGTTTTGCAAG+AGG | + | chr1.3:69557845-69557864 | None:intergenic | 40.0% |
| ! | CTGGTTGGGTTTGTTTAAAG+GGG | + | chr1.3:69558769-69558788 | None:intergenic | 40.0% |
| ! | GAGGTATCTTTCTCCATCTT+AGG | + | chr1.3:69555941-69555960 | None:intergenic | 40.0% |
| ! | GTTAGTTTAGAGGTGAAGGT+TGG | + | chr1.3:69557813-69557832 | None:intergenic | 40.0% |
| ! | TACTAAGGCTCCCATTGTTT+TGG | + | chr1.3:69558637-69558656 | None:intergenic | 40.0% |
| ! | TTCAATGAAGCAGCTGGTTT+AGG | - | chr1.3:69556563-69556582 | MS.gene49076:intron | 40.0% |
| ! | TTGGGAATTGGGGTTTTCTA+GGG | + | chr1.3:69556098-69556117 | None:intergenic | 40.0% |
| ! | TTTTCACCTTTTGCGGAATC+AGG | - | chr1.3:69557232-69557251 | MS.gene49076:intron | 40.0% |
| !! | CGATTGGCCATTAGTTGTTT+TGG | - | chr1.3:69558442-69558461 | MS.gene49076:intron | 40.0% |
| !!! | TGGGGTTTTCTAGGGTTTTA+GGG | + | chr1.3:69556090-69556109 | None:intergenic | 40.0% |
| !!! | TTGGGGTTTTCTAGGGTTTT+AGG | + | chr1.3:69556091-69556110 | None:intergenic | 40.0% |
| AAGATCTTACCATTCTCCCC+TGG | + | chr1.3:69559024-69559043 | None:intergenic | 45.0% | |
| AAGTTTGAGGAACGGCAACT+GGG | + | chr1.3:69556623-69556642 | None:intergenic | 45.0% | |
| AATGGATGAGTGGTCACACT+AGG | + | chr1.3:69557521-69557540 | None:intergenic | 45.0% | |
| AATGGGCGGCACAATACATA+AGG | + | chr1.3:69558570-69558589 | None:intergenic | 45.0% | |
| AATGTGTTGCAATCTGGTGG+AGG | - | chr1.3:69559294-69559313 | MS.gene49076:intron | 45.0% | |
| ACAACTAATGGCCAATCGTC+GGG | + | chr1.3:69558440-69558459 | None:intergenic | 45.0% | |
| AGTGATAGCAAAACCAGCCA+TGG | + | chr1.3:69556596-69556615 | None:intergenic | 45.0% | |
| ATACACAGAATCTCGAGGGA+AGG | + | chr1.3:69558886-69558905 | None:intergenic | 45.0% | |
| ATCCTTGGCATCTTGCAGAT+AGG | - | chr1.3:69559269-69559288 | MS.gene49076:intron | 45.0% | |
| CAAGACTCTCCCTCTCAAAA+TGG | + | chr1.3:69558588-69558607 | None:intergenic | 45.0% | |
| CAGTAAAATTCCTTCCACGC+TGG | + | chr1.3:69557096-69557115 | None:intergenic | 45.0% | |
| CCATTATCGAGCTACACCTT+CGG | - | chr1.3:69555905-69555924 | MS.gene49076:intron | 45.0% | |
| GAGGACGATATCATCGAAAC+AGG | + | chr1.3:69556471-69556490 | None:intergenic | 45.0% | |
| GCTGGGTTGCAATGCAATAA+AGG | - | chr1.3:69558124-69558143 | MS.gene49076:intron | 45.0% | |
| GGCAATACACAGAATCTCGA+GGG | + | chr1.3:69558890-69558909 | None:intergenic | 45.0% | |
| GTGAATGTGTTGCAATCTGG+TGG | - | chr1.3:69559291-69559310 | MS.gene49076:intron | 45.0% | |
| GTGGTCACACTAGGCAAAAT+AGG | + | chr1.3:69557512-69557531 | None:intergenic | 45.0% | |
| TGGCAATACACAGAATCTCG+AGG | + | chr1.3:69558891-69558910 | None:intergenic | 45.0% | |
| TGTAATCATACCTGCCAGTC+AGG | + | chr1.3:69559188-69559207 | None:intergenic | 45.0% | |
| TGTGTTAGAAGTGGGATGGT+TGG | + | chr1.3:69556700-69556719 | None:intergenic | 45.0% | |
| TTTCTCCATCTTAGGCTCCT+TGG | + | chr1.3:69555933-69555952 | None:intergenic | 45.0% | |
| TTTGAGCATCACACAGGACA+AGG | + | chr1.3:69556991-69557010 | None:intergenic | 45.0% | |
| ! | ACATTTGAAGTTTGGGGGGA+GGG | + | chr1.3:69557148-69557167 | None:intergenic | 45.0% |
| ! | ACATTTTGCAAACTCCCAGG+CGG | - | chr1.3:69558988-69559007 | MS.gene49076:intron | 45.0% |
| ! | AGGGGAGTTTTCCATTATGG+CGG | + | chr1.3:69558751-69558770 | None:intergenic | 45.0% |
| ! | CAGCGTGGAAGGAATTTTAC+TGG | - | chr1.3:69557094-69557113 | MS.gene49076:intron | 45.0% |
| ! | CGAAGGTGTAGCTCGATAAT+GGG | + | chr1.3:69555907-69555926 | None:intergenic | 45.0% |
| ! | TACATTTGAAGTTTGGGGGG+AGG | + | chr1.3:69557149-69557168 | None:intergenic | 45.0% |
| ! | TCTGGTTTCAATGAAGCAGC+TGG | - | chr1.3:69556557-69556576 | MS.gene49076:intron | 45.0% |
| !! | AAGCTTGGTGCTAATTCACC+CGG | - | chr1.3:69559155-69559174 | MS.gene49076:intron | 45.0% |
| !! | CATTTTGAGAGGGAGAGTCT+TGG | - | chr1.3:69558586-69558605 | MS.gene49076:intron | 45.0% |
| ACATAAGGCTCTCGCTACTG+AGG | + | chr1.3:69558555-69558574 | None:intergenic | 50.0% | |
| ACTCTCCCTCTCAAAATGGG+CGG | + | chr1.3:69558584-69558603 | None:intergenic | 50.0% | |
| AGGGAGCTGTGCGGAATTTA+TGG | - | chr1.3:69558381-69558400 | MS.gene49076:intron | 50.0% | |
| ATACCTGCCAGTCAGGTACA+AGG | + | chr1.3:69559181-69559200 | None:intergenic | 50.0% | |
| ATTCTATGAGGCCCGACGAT+TGG | - | chr1.3:69558426-69558445 | MS.gene49076:intron | 50.0% | |
| CACCTATCTGCAAGATGCCA+AGG | + | chr1.3:69559274-69559293 | None:intergenic | 50.0% | |
| CTGGTTTAGGCGTTTAGCCA+TGG | - | chr1.3:69556576-69556595 | MS.gene49076:intron | 50.0% | |
| GAAGTTTGAGGAACGGCAAC+TGG | + | chr1.3:69556624-69556643 | None:intergenic | 50.0% | |
| GCCTACAGAATCCAGTTGCA+CGG | - | chr1.3:69558692-69558711 | MS.gene49076:intron | 50.0% | |
| GGGAGGGTAGTCAAGTACTA+AGG | + | chr1.3:69558652-69558671 | None:intergenic | 50.0% | |
| TAGAGGGAGATGTCAGCCAT+AGG | + | chr1.3:69557726-69557745 | None:intergenic | 50.0% | |
| TCCGTGCAACTGGATTCTGT+AGG | + | chr1.3:69558696-69558715 | None:intergenic | 50.0% | |
| TGAGGTTTGGGGAGGGTTAA+AGG | + | chr1.3:69558537-69558556 | None:intergenic | 50.0% | |
| TGGGAGGCTTGAGCATATGT+GGG | + | chr1.3:69557415-69557434 | None:intergenic | 50.0% | |
| TTAGAAGTGGGATGGTTGGC+TGG | + | chr1.3:69556696-69556715 | None:intergenic | 50.0% | |
| TTCCCCCAGCCCAAAACAAT+GGG | - | chr1.3:69558624-69558643 | MS.gene49076:intron | 50.0% | |
| TTGGGAGGCTTGAGCATATG+TGG | + | chr1.3:69557416-69557435 | None:intergenic | 50.0% | |
| TTTAGGCGTTTAGCCATGGC+TGG | - | chr1.3:69556580-69556599 | MS.gene49076:intron | 50.0% | |
| ! | ATTGTGCCGCCCATTTTGAG+AGG | - | chr1.3:69558575-69558594 | MS.gene49076:intron | 50.0% |
| ! | CATTTGAAGTTTGGGGGGAG+GGG | + | chr1.3:69557147-69557166 | None:intergenic | 50.0% |
| ! | CCGAAGGTGTAGCTCGATAA+TGG | + | chr1.3:69555908-69555927 | None:intergenic | 50.0% |
| ! | CCTTAAAAAAGGGCGTGGGA+GGG | + | chr1.3:69558668-69558687 | None:intergenic | 50.0% |
| ! | GTTTGTTGAAGGGAGCTGTG+CGG | - | chr1.3:69558372-69558391 | MS.gene49076:intron | 50.0% |
| ! | TCCTTAAAAAAGGGCGTGGG+AGG | + | chr1.3:69558669-69558688 | None:intergenic | 50.0% |
| !! | TTGTGCCGCCCATTTTGAGA+GGG | - | chr1.3:69558576-69558595 | MS.gene49076:intron | 50.0% |
| ACGAGCAAGACGATCAGCGA+CGG | + | chr1.3:69555963-69555982 | None:intergenic | 55.0% | |
| AGAAGGAATGAGGACCAGCG+TGG | - | chr1.3:69557079-69557098 | MS.gene49076:intron | 55.0% | |
| AGGCTCTCGCTACTGAGGTT+TGG | + | chr1.3:69558550-69558569 | None:intergenic | 55.0% | |
| CGGAACCAAGGAGCCTAAGA+TGG | - | chr1.3:69555925-69555944 | MS.gene49076:intron | 55.0% | |
| CTTAGGCTCCTTGGTTCCGA+AGG | + | chr1.3:69555924-69555943 | None:intergenic | 55.0% | |
| CTTCCCCCAGCCCAAAACAA+TGG | - | chr1.3:69558623-69558642 | MS.gene49076:intron | 55.0% | |
| GAGCTACACCTTCGGAACCA+AGG | - | chr1.3:69555913-69555932 | MS.gene49076:intron | 55.0% | |
| GCTCTCGCTACTGAGGTTTG+GGG | + | chr1.3:69558548-69558567 | None:intergenic | 55.0% | |
| GGCTCTCGCTACTGAGGTTT+GGG | + | chr1.3:69558549-69558568 | None:intergenic | 55.0% | |
| GGGAGGCTTGAGCATATGTG+GGG | + | chr1.3:69557414-69557433 | None:intergenic | 55.0% | |
| GTTGCATGCTAGGAGAGGAC+TGG | + | chr1.3:69557955-69557974 | None:intergenic | 55.0% | |
| TCGCTACTGAGGTTTGGGGA+GGG | + | chr1.3:69558544-69558563 | None:intergenic | 55.0% | |
| TGTTCTGGTCTCCGTGCAAC+TGG | + | chr1.3:69558706-69558725 | None:intergenic | 55.0% | |
| ! | ATGGTTGGCTGGCTATCTGG+GGG | + | chr1.3:69556685-69556704 | None:intergenic | 55.0% |
| ! | CATTCTCCCCTGGCTTGAGA+CGG | + | chr1.3:69559014-69559033 | None:intergenic | 55.0% |
| ! | GATGGTTGGCTGGCTATCTG+GGG | + | chr1.3:69556686-69556705 | None:intergenic | 55.0% |
| ! | GGATGGTTGGCTGGCTATCT+GGG | + | chr1.3:69556687-69556706 | None:intergenic | 55.0% |
| !!! | AGGCTCCCATTGTTTTGGGC+TGG | + | chr1.3:69558632-69558651 | None:intergenic | 55.0% |
| !!! | CCCTCCCACGCCCTTTTTTA+AGG | - | chr1.3:69558665-69558684 | MS.gene49076:intron | 55.0% |
| !!! | CTCCCATTGTTTTGGGCTGG+GGG | + | chr1.3:69558629-69558648 | None:intergenic | 55.0% |
| !!! | GCTCCCATTGTTTTGGGCTG+GGG | + | chr1.3:69558630-69558649 | None:intergenic | 55.0% |
| !!! | GGCTCCCATTGTTTTGGGCT+GGG | + | chr1.3:69558631-69558650 | None:intergenic | 55.0% |
| ACCAGAACAGCCCCACCTGT+TGG | - | chr1.3:69558717-69558736 | MS.gene49076:intron | 60.0% | |
| AGCAAGACGATCAGCGACGG+AGG | + | chr1.3:69555960-69555979 | None:intergenic | 60.0% | |
| CCAGAACAGCCCCACCTGTT+GGG | - | chr1.3:69558718-69558737 | MS.gene49076:intron | 60.0% | |
| CGTCTCAAGCCAGGGGAGAA+TGG | - | chr1.3:69559012-69559031 | MS.gene49076:intron | 60.0% | |
| CTCGCTACTGAGGTTTGGGG+AGG | + | chr1.3:69558545-69558564 | None:intergenic | 60.0% | |
| CTGCCAGTCAGGTACAAGGC+CGG | + | chr1.3:69559177-69559196 | None:intergenic | 60.0% | |
| GGAATGAGGACCAGCGTGGA+AGG | - | chr1.3:69557083-69557102 | MS.gene49076:intron | 60.0% | |
| TGCCAGTCAGGTACAAGGCC+GGG | + | chr1.3:69559176-69559195 | None:intergenic | 60.0% | |
| TGGGAGTGGGTCCGCCATAA+TGG | - | chr1.3:69558737-69558756 | MS.gene49076:intron | 60.0% | |
| ! | GGGATGGTTGGCTGGCTATC+TGG | + | chr1.3:69556688-69556707 | None:intergenic | 60.0% |
| ACAGCCCCACCTGTTGGGAG+TGG | - | chr1.3:69558723-69558742 | MS.gene49076:intron | 65.0% | |
| CAGCCCCACCTGTTGGGAGT+GGG | - | chr1.3:69558724-69558743 | MS.gene49076:intron | 65.0% | |
| CCCAACAGGTGGGGCTGTTC+TGG | + | chr1.3:69558721-69558740 | None:intergenic | 65.0% | |
| CGGACCCACTCCCAACAGGT+GGG | + | chr1.3:69558731-69558750 | None:intergenic | 65.0% | |
| GGACCCACTCCCAACAGGTG+GGG | + | chr1.3:69558730-69558749 | None:intergenic | 65.0% | |
| ! | CACCCGGCCTTGTACCTGAC+TGG | - | chr1.3:69559171-69559190 | MS.gene49076:intron | 65.0% |
| ! | CGGCCTTGTACCTGACTGGC+AGG | - | chr1.3:69559175-69559194 | MS.gene49076:intron | 65.0% |
| !! | ATGGCGGACCCACTCCCAAC+AGG | + | chr1.3:69558735-69558754 | None:intergenic | 65.0% |
| AGGCGGCCGTCTCAAGCCAG+GGG | - | chr1.3:69559005-69559024 | MS.gene49076:intron | 70.0% | |
| CAGGCGGCCGTCTCAAGCCA+GGG | - | chr1.3:69559004-69559023 | MS.gene49076:intron | 70.0% | |
| GCGGACCCACTCCCAACAGG+TGG | + | chr1.3:69558732-69558751 | None:intergenic | 70.0% | |
| ! | CTGGCTTGAGACGGCCGCCT+GGG | + | chr1.3:69559005-69559024 | None:intergenic | 70.0% |
| CCAGGCGGCCGTCTCAAGCC+AGG | - | chr1.3:69559003-69559022 | MS.gene49076:intron | 75.0% | |
| ! | CCTGGCTTGAGACGGCCGCC+TGG | + | chr1.3:69559006-69559025 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 69555875 | 69559631 | 69555875 | ID=MS.gene49076 |
| chr1.3 | mRNA | 69555875 | 69559631 | 69555875 | ID=MS.gene49076.t1;Parent=MS.gene49076 |
| chr1.3 | exon | 69559513 | 69559631 | 69559513 | ID=MS.gene49076.t1.exon1;Parent=MS.gene49076.t1 |
| chr1.3 | CDS | 69559513 | 69559631 | 69559513 | ID=cds.MS.gene49076.t1;Parent=MS.gene49076.t1 |
| chr1.3 | exon | 69558391 | 69558436 | 69558391 | ID=MS.gene49076.t1.exon2;Parent=MS.gene49076.t1 |
| chr1.3 | CDS | 69558391 | 69558436 | 69558391 | ID=cds.MS.gene49076.t1;Parent=MS.gene49076.t1 |
| chr1.3 | exon | 69556473 | 69556566 | 69556473 | ID=MS.gene49076.t1.exon3;Parent=MS.gene49076.t1 |
| chr1.3 | CDS | 69556473 | 69556566 | 69556473 | ID=cds.MS.gene49076.t1;Parent=MS.gene49076.t1 |
| chr1.3 | exon | 69556310 | 69556383 | 69556310 | ID=MS.gene49076.t1.exon4;Parent=MS.gene49076.t1 |
| chr1.3 | CDS | 69556310 | 69556383 | 69556310 | ID=cds.MS.gene49076.t1;Parent=MS.gene49076.t1 |
| chr1.3 | exon | 69556133 | 69556219 | 69556133 | ID=MS.gene49076.t1.exon5;Parent=MS.gene49076.t1 |
| chr1.3 | CDS | 69556133 | 69556219 | 69556133 | ID=cds.MS.gene49076.t1;Parent=MS.gene49076.t1 |
| chr1.3 | exon | 69555929 | 69556039 | 69555929 | ID=MS.gene49076.t1.exon6;Parent=MS.gene49076.t1 |
| chr1.3 | CDS | 69555929 | 69556039 | 69555929 | ID=cds.MS.gene49076.t1;Parent=MS.gene49076.t1 |
| chr1.3 | exon | 69555875 | 69555880 | 69555875 | ID=MS.gene49076.t1.exon7;Parent=MS.gene49076.t1 |
| chr1.3 | CDS | 69555875 | 69555880 | 69555875 | ID=cds.MS.gene49076.t1;Parent=MS.gene49076.t1 |
| Gene Sequence |
| Protein sequence |
