Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41420.t1 | XP_013469683.1 | 100 | 177 | 0 | 0 | 1 | 177 | 1 | 177 | 5.00E-100 | 373.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41420.t1 | Q8GXS3 | 89.3 | 177 | 19 | 0 | 1 | 177 | 1 | 177 | 1.0e-93 | 344.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41420.t1 | I3SXB4 | 100.0 | 177 | 0 | 0 | 1 | 177 | 1 | 177 | 3.6e-100 | 373.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene41420 | MS.gene024701 | PPI |
| MS.gene025171 | MS.gene41420 | PPI |
| MS.gene41420 | MS.gene22289 | PPI |
| MS.gene41420 | MS.gene21679 | PPI |
| MS.gene41420 | MS.gene21951 | PPI |
| MS.gene41420 | MS.gene22519 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41420.t1 | MTR_1g100673 | 100.000 | 177 | 0 | 0 | 1 | 177 | 1 | 177 | 1.86e-132 | 369 |
| MS.gene41420.t1 | MTR_2g040570 | 50.467 | 107 | 46 | 3 | 7 | 112 | 17 | 117 | 8.76e-30 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41420.t1 | AT4G25550 | 89.266 | 177 | 19 | 0 | 1 | 177 | 1 | 177 | 3.61e-121 | 340 |
| MS.gene41420.t1 | AT4G29820 | 58.235 | 170 | 71 | 0 | 6 | 175 | 28 | 197 | 2.67e-70 | 212 |
Find 49 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACATTATAGTTTCAAAATT+TGG | 0.111915 | 1.4:+78467070 | None:intergenic |
| CCGAAGGTGTAGCTCGATAA+TGG | 0.323738 | 1.4:+78470507 | None:intergenic |
| GTTATATGAGGAGGACAGTA+TGG | 0.348606 | 1.4:+78467046 | None:intergenic |
| CATATTCTTCTTCTGCAAAT+CGG | 0.351829 | 1.4:-78467426 | MS.gene41420:CDS |
| CCTGGCTTGAGACGGCCGCC+TGG | 0.352635 | 1.4:+78467384 | None:intergenic |
| ATATTCTTCTTCTGCAAATC+GGG | 0.410634 | 1.4:-78467425 | MS.gene41420:CDS |
| TGAACTCTATGACAATGTTC+AGG | 0.434805 | 1.4:-78466831 | MS.gene41420:intron |
| CTGGCTTGAGACGGCCGCCT+GGG | 0.436161 | 1.4:+78467385 | None:intergenic |
| CCTTGTTCACTTATCTGAAA+GGG | 0.439725 | 1.4:-78466903 | MS.gene41420:CDS |
| CCAGGCGGCCGTCTCAAGCC+AGG | 0.446518 | 1.4:-78467384 | MS.gene41420:CDS |
| TGTAATCATACCTGCCAGTC+AGG | 0.447945 | 1.4:+78467202 | None:intergenic |
| TTGTATGTTTACAGAAATTG+AGG | 0.449117 | 1.4:-78467278 | MS.gene41420:intron |
| CGAAGGTGTAGCTCGATAAT+GGG | 0.467758 | 1.4:+78470508 | None:intergenic |
| GAGGTATCTTTCTCCATCTT+AGG | 0.484631 | 1.4:+78470474 | None:intergenic |
| CAGGCGGCCGTCTCAAGCCA+GGG | 0.484829 | 1.4:-78467383 | MS.gene41420:CDS |
| CGTCTCAAGCCAGGGGAGAA+TGG | 0.493218 | 1.4:-78467375 | MS.gene41420:intron |
| TCCTTGTTCACTTATCTGAA+AGG | 0.498741 | 1.4:-78466904 | MS.gene41420:CDS |
| AGAAAATTGACTAGCAAGCT+TGG | 0.501691 | 1.4:-78467247 | MS.gene41420:CDS |
| CGGCCTTGTACCTGACTGGC+AGG | 0.509791 | 1.4:-78467212 | MS.gene41420:intron |
| TGCCAGTCAGGTACAAGGCC+GGG | 0.510170 | 1.4:+78467214 | None:intergenic |
| CGGCACTAAGGAGCCTAAGA+TGG | 0.511864 | 1.4:-78470487 | MS.gene41420:CDS |
| AACTTCAGTTATATGAAAGA+AGG | 0.526771 | 1.4:-78469343 | MS.gene41420:intron |
| GGAATGAGGACCAGCGTGGA+AGG | 0.530721 | 1.4:-78469322 | MS.gene41420:CDS |
| ATTTGCAGAAGAAGAATATG+AGG | 0.532812 | 1.4:+78467429 | None:intergenic |
| TAGGTGAATGTGTTGCAATC+TGG | 0.534479 | 1.4:-78467099 | MS.gene41420:CDS |
| AAGATCTTACCATTCTCCCC+TGG | 0.548421 | 1.4:+78467366 | None:intergenic |
| CCATTATCGAGCTACACCTT+CGG | 0.548731 | 1.4:-78470507 | MS.gene41420:CDS |
| TGTATGTTTACAGAAATTGA+GGG | 0.552205 | 1.4:-78467277 | MS.gene41420:intron |
| CCCTTTCAGATAAGTGAACA+AGG | 0.554396 | 1.4:+78466903 | None:intergenic |
| CACCCGGCCTTGTACCTGAC+TGG | 0.560733 | 1.4:-78467216 | MS.gene41420:CDS |
| GAGAAAGATGATACCCTCTC+AGG | 0.560955 | 1.4:-78470544 | None:intergenic |
| CTGCCAGTCAGGTACAAGGC+CGG | 0.563251 | 1.4:+78467213 | None:intergenic |
| GTTATATGAAAGAAGGAATG+AGG | 0.564077 | 1.4:-78469336 | MS.gene41420:CDS |
| CTTAGGCTCCTTAGTGCCGA+AGG | 0.573156 | 1.4:+78470491 | None:intergenic |
| ATACCTGCCAGTCAGGTACA+AGG | 0.579704 | 1.4:+78467209 | None:intergenic |
| GAGCTACACCTTCGGCACTA+AGG | 0.583476 | 1.4:-78470499 | MS.gene41420:CDS |
| CATTCTCCCCTGGCTTGAGA+CGG | 0.592769 | 1.4:+78467376 | None:intergenic |
| TCCTCATATAACAAAACCCA+AGG | 0.593485 | 1.4:-78467035 | MS.gene41420:intron |
| AATGTGTTGCAATCTGGTGG+AGG | 0.600436 | 1.4:-78467093 | MS.gene41420:CDS |
| GTGAATGTGTTGCAATCTGG+TGG | 0.633660 | 1.4:-78467096 | MS.gene41420:CDS |
| TATGTGTTTACTACCTGAGA+GGG | 0.633947 | 1.4:+78470531 | None:intergenic |
| AAGCTTGGTGCTAATTCACC+CGG | 0.635284 | 1.4:-78467232 | MS.gene41420:CDS |
| AGCAAGACGATCAGCGACGG+AGG | 0.638191 | 1.4:+78470455 | None:intergenic |
| AGGCGGCCGTCTCAAGCCAG+GGG | 0.645996 | 1.4:-78467382 | MS.gene41420:CDS |
| CAGTAAAATTCCTTCCACGC+TGG | 0.660338 | 1.4:+78469312 | None:intergenic |
| ACGAGCAAGACGATCAGCGA+CGG | 0.664522 | 1.4:+78470452 | None:intergenic |
| GTATGTGTTTACTACCTGAG+AGG | 0.672150 | 1.4:+78470530 | None:intergenic |
| TTGTCATAGAGTTCAAACAA+TGG | 0.696073 | 1.4:+78466839 | None:intergenic |
| AGAAGGAATGAGGACCAGCG+TGG | 0.707171 | 1.4:-78469326 | MS.gene41420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATAAACAATATATTATT+GGG | + | chr1.4:78467079-78467098 | None:intergenic | 10.0% |
| !! | TTACATAAACAATATATTAT+TGG | + | chr1.4:78467080-78467099 | None:intergenic | 10.0% |
| !!! | AATATGATAAAATTTTGTAT+TGG | + | chr1.4:78468343-78468362 | None:intergenic | 10.0% |
| !!! | ATATGATAAAATTTTGTATT+GGG | + | chr1.4:78468342-78468361 | None:intergenic | 10.0% |
| !! | AAATTCATTATATACTCAAA+TGG | - | chr1.4:78467918-78467937 | MS.gene41420:intron | 15.0% |
| !! | ATCGAATAAAATTAATCAAA+AGG | + | chr1.4:78466951-78466970 | None:intergenic | 15.0% |
| !! | GTCATATAAAATGTTTATAT+TGG | + | chr1.4:78467753-78467772 | None:intergenic | 15.0% |
| !! | TAAGATTACATCATTAAAAA+AGG | + | chr1.4:78468395-78468414 | None:intergenic | 15.0% |
| !! | TACATTATAGTTTCAAAATT+TGG | + | chr1.4:78470248-78470267 | None:intergenic | 15.0% |
| !! | TCGAATAAAATTAATCAAAA+GGG | + | chr1.4:78466950-78466969 | None:intergenic | 15.0% |
| !!! | ATAAAATTACATTTGAAGTT+TGG | + | chr1.4:78468066-78468085 | None:intergenic | 15.0% |
| !!! | TAAAAAGTGTAAAAACTAAA+TGG | + | chr1.4:78469742-78469761 | None:intergenic | 15.0% |
| !!! | TAAAATTACATTTGAAGTTT+GGG | + | chr1.4:78468065-78468084 | None:intergenic | 15.0% |
| !!! | TCTATAATTCTATTTTAGAT+TGG | - | chr1.4:78469423-78469442 | MS.gene41420:intron | 15.0% |
| !!! | TTATATTTTAGTTTGTTGAA+GGG | - | chr1.4:78469290-78469309 | MS.gene41420:intron | 15.0% |
| !!! | TTTATATTTTAGTTTGTTGA+AGG | - | chr1.4:78469289-78469308 | MS.gene41420:intron | 15.0% |
| !! | AAGTAAAAAGATTATATGAG+AGG | + | chr1.4:78467875-78467894 | None:intergenic | 20.0% |
| !! | TATTAGTAAAATTGGGAATT+GGG | + | chr1.4:78467012-78467031 | None:intergenic | 20.0% |
| !!! | AAAATTACATTTGAAGTTTG+GGG | + | chr1.4:78468064-78468083 | None:intergenic | 20.0% |
| !!! | AAATAAAGCCATATAACTTT+TGG | + | chr1.4:78467684-78467703 | None:intergenic | 20.0% |
| !!! | AATAAAGCCATATAACTTTT+GGG | + | chr1.4:78467683-78467702 | None:intergenic | 20.0% |
| !!! | ACATACAAAAAAAGTACATT+TGG | + | chr1.4:78470025-78470044 | None:intergenic | 20.0% |
| !!! | AGTAGAGTATTAGTAAAATT+GGG | + | chr1.4:78467019-78467038 | None:intergenic | 20.0% |
| ! | AAACCTATAGATAAACTTTG+GGG | + | chr1.4:78468581-78468600 | None:intergenic | 25.0% |
| ! | AACTTCAGTTATATGAAAGA+AGG | - | chr1.4:78467972-78467991 | MS.gene41420:intron | 25.0% |
| ! | ACAAACCTATAGATAAACTT+TGG | + | chr1.4:78468583-78468602 | None:intergenic | 25.0% |
| ! | AGTTTATCTATAGGTTTGTA+CGG | - | chr1.4:78468584-78468603 | MS.gene41420:intron | 25.0% |
| ! | ATATATTAAAGTTGCATGCT+AGG | + | chr1.4:78468907-78468926 | None:intergenic | 25.0% |
| ! | ATCAATTTACCTTATTGTGA+AGG | + | chr1.4:78469255-78469274 | None:intergenic | 25.0% |
| ! | ATGTTCTCTACAGAAATAAT+AGG | + | chr1.4:78469790-78469809 | None:intergenic | 25.0% |
| ! | ATTAGTAAAATTGGGAATTG+GGG | + | chr1.4:78467011-78467030 | None:intergenic | 25.0% |
| ! | ATTATATACTCAAATGGTTC+TGG | - | chr1.4:78467924-78467943 | MS.gene41420:intron | 25.0% |
| ! | CAAACCTATAGATAAACTTT+GGG | + | chr1.4:78468582-78468601 | None:intergenic | 25.0% |
| ! | CTTCATTTATCTGAATTGAA+GGG | - | chr1.4:78468824-78468843 | MS.gene41420:intron | 25.0% |
| ! | GTATTAGTAAAATTGGGAAT+TGG | + | chr1.4:78467013-78467032 | None:intergenic | 25.0% |
| ! | TACATCATTAAAAAAGGTAG+AGG | + | chr1.4:78468389-78468408 | None:intergenic | 25.0% |
| ! | TATACTATACCACAGTATTA+TGG | + | chr1.4:78468728-78468747 | None:intergenic | 25.0% |
| ! | TATTATGGTTTAAGAACCAT+GGG | + | chr1.4:78468713-78468732 | None:intergenic | 25.0% |
| ! | TATTTGCAGACTATCATATT+CGG | + | chr1.4:78469986-78470005 | None:intergenic | 25.0% |
| ! | TCCACTAACTACTATTAATA+CGG | + | chr1.4:78469039-78469058 | None:intergenic | 25.0% |
| ! | TCTTCATTTATCTGAATTGA+AGG | - | chr1.4:78468823-78468842 | MS.gene41420:intron | 25.0% |
| ! | TCTTTCATATAACTGAAGTT+TGG | + | chr1.4:78467972-78467991 | None:intergenic | 25.0% |
| ! | TGTATGTTTACAGAAATTGA+GGG | - | chr1.4:78470038-78470057 | MS.gene41420:intron | 25.0% |
| ! | TTACTAACCAAAACAACTAA+TGG | + | chr1.4:78469380-78469399 | None:intergenic | 25.0% |
| ! | TTCCTCTACTTCTAATTAAA+GGG | - | chr1.4:78468257-78468276 | MS.gene41420:intron | 25.0% |
| ! | TTGTATGTTTACAGAAATTG+AGG | - | chr1.4:78470037-78470056 | MS.gene41420:intron | 25.0% |
| ! | TTTCCTCTACTTCTAATTAA+AGG | - | chr1.4:78468256-78468275 | MS.gene41420:intron | 25.0% |
| !! | AAATTACATTTGAAGTTTGG+GGG | + | chr1.4:78468063-78468082 | None:intergenic | 25.0% |
| !! | ATAAAGCCATATAACTTTTG+GGG | + | chr1.4:78467682-78467701 | None:intergenic | 25.0% |
| !! | ATAGGTATTCAGAAATTTTC+TGG | - | chr1.4:78467449-78467468 | MS.gene41420:CDS | 25.0% |
| !! | ATGCAATAAAGGTATATTAG+TGG | - | chr1.4:78469077-78469096 | MS.gene41420:intron | 25.0% |
| !! | CAGTAGAGTATTAGTAAAAT+TGG | + | chr1.4:78467020-78467039 | None:intergenic | 25.0% |
| !! | CTTTGTACTTGATTTGATAT+GGG | - | chr1.4:78467170-78467189 | MS.gene41420:intron | 25.0% |
| !! | GAAGAAAAATGTTAGTTTAG+AGG | + | chr1.4:78468765-78468784 | None:intergenic | 25.0% |
| !! | TGATAAAATTTTGTATTGGG+AGG | + | chr1.4:78468339-78468358 | None:intergenic | 25.0% |
| !! | TTCAAGTTTAGAAAAAACTG+TGG | - | chr1.4:78467402-78467421 | MS.gene41420:CDS | 25.0% |
| !!! | ACAGTTTTTTCTAAACTTGA+AGG | + | chr1.4:78467403-78467422 | None:intergenic | 25.0% |
| !!! | GCTTTATGCTTTATTTTTGT+AGG | - | chr1.4:78469846-78469865 | MS.gene41420:intron | 25.0% |
| !!! | TTCTATTTTAGATTGGATAG+TGG | - | chr1.4:78469430-78469449 | MS.gene41420:intron | 25.0% |
| AAAATAGGATTATGGATGAG+TGG | + | chr1.4:78468439-78468458 | None:intergenic | 30.0% | |
| AATAATAGGACAGGACATTA+TGG | + | chr1.4:78469776-78469795 | None:intergenic | 30.0% | |
| AGACAAACTCAATGTGTATA+TGG | + | chr1.4:78467715-78467734 | None:intergenic | 30.0% | |
| ATAATAGGACAGGACATTAT+GGG | + | chr1.4:78469775-78469794 | None:intergenic | 30.0% | |
| ATATTCTTCTTCTGCAAATC+GGG | - | chr1.4:78469890-78469909 | MS.gene41420:intron | 30.0% | |
| ATCCCTTTAATTAGAAGTAG+AGG | + | chr1.4:78468262-78468281 | None:intergenic | 30.0% | |
| ATCTAGTAATCCATTTCCTA+AGG | - | chr1.4:78469226-78469245 | MS.gene41420:intron | 30.0% | |
| ATGATTGATGAAAGAGTAAG+AGG | + | chr1.4:78467431-78467450 | None:intergenic | 30.0% | |
| ATTTGCAGAAGAAGAATATG+AGG | + | chr1.4:78469889-78469908 | None:intergenic | 30.0% | |
| CAAGAAACTAAATCTCTTGA+TGG | + | chr1.4:78467556-78467575 | None:intergenic | 30.0% | |
| CACTAGACAAAATAGGATTA+TGG | + | chr1.4:78468413-78468432 | None:intergenic | 30.0% | |
| CAGAGATAATAATGCTACAA+TGG | + | chr1.4:78468481-78468500 | None:intergenic | 30.0% | |
| CATATTCTTCTTCTGCAAAT+CGG | - | chr1.4:78469889-78469908 | MS.gene41420:intron | 30.0% | |
| CCACTAACTACTATTAATAC+GGG | + | chr1.4:78469038-78469057 | None:intergenic | 30.0% | |
| CCATATCAAATCAAGTACAA+AGG | + | chr1.4:78467172-78467191 | None:intergenic | 30.0% | |
| CTTACTCTTTCATCAATCAT+AGG | - | chr1.4:78467431-78467450 | MS.gene41420:CDS | 30.0% | |
| GAAATGTGTTACACAAAACA+AGG | - | chr1.4:78467325-78467344 | MS.gene41420:intron | 30.0% | |
| GGTGAAATAGAGGAATATTT+CGG | + | chr1.4:78468632-78468651 | None:intergenic | 30.0% | |
| GTAGGCATATCCTTAAAAAA+GGG | + | chr1.4:78469606-78469625 | None:intergenic | 30.0% | |
| GTATTATGGTTTAAGAACCA+TGG | + | chr1.4:78468714-78468733 | None:intergenic | 30.0% | |
| GTTAGTAATGAAGAGTTTGA+CGG | - | chr1.4:78469392-78469411 | MS.gene41420:intron | 30.0% | |
| GTTATATGAAAGAAGGAATG+AGG | - | chr1.4:78467979-78467998 | MS.gene41420:intron | 30.0% | |
| GTTCTTAAACCATAATACTG+TGG | - | chr1.4:78468716-78468735 | MS.gene41420:intron | 30.0% | |
| TCCATTAATATCTTCTATGC+AGG | - | chr1.4:78470373-78470392 | MS.gene41420:intron | 30.0% | |
| TCCTGCATAGAAGATATTAA+TGG | + | chr1.4:78470377-78470396 | None:intergenic | 30.0% | |
| TGATTGATGAAAGAGTAAGA+GGG | + | chr1.4:78467430-78467449 | None:intergenic | 30.0% | |
| TGCATTCTGTATACTGTATT+TGG | - | chr1.4:78468798-78468817 | MS.gene41420:intron | 30.0% | |
| TGTACAAATGGATAGATAGA+GGG | + | chr1.4:78468684-78468703 | None:intergenic | 30.0% | |
| TGTAGGCATATCCTTAAAAA+AGG | + | chr1.4:78469607-78469626 | None:intergenic | 30.0% | |
| TGTTGATCTTACTTTCTTGT+TGG | - | chr1.4:78468504-78468523 | MS.gene41420:intron | 30.0% | |
| TTAAACCATCAAGAAAGAAC+TGG | + | chr1.4:78468227-78468246 | None:intergenic | 30.0% | |
| TTGTACAAATGGATAGATAG+AGG | + | chr1.4:78468685-78468704 | None:intergenic | 30.0% | |
| TTGTCATAGAGTTCAAACAA+TGG | + | chr1.4:78470479-78470498 | None:intergenic | 30.0% | |
| ! | AAAGTACCCCAAAAGTTATA+TGG | - | chr1.4:78467673-78467692 | MS.gene41420:intron | 30.0% |
| ! | AAATGTTAGTTTAGAGGTGA+AGG | + | chr1.4:78468759-78468778 | None:intergenic | 30.0% |
| ! | AAGGCACTAAAAAAGAGTAT+CGG | + | chr1.4:78467231-78467250 | None:intergenic | 30.0% |
| ! | AATTACATTTGAAGTTTGGG+GGG | + | chr1.4:78468062-78468081 | None:intergenic | 30.0% |
| ! | AATTTTATTCGATCGCTTCT+GGG | - | chr1.4:78466958-78466977 | MS.gene41420:intron | 30.0% |
| ! | ATATCATCGAAACAGGTTTT+AGG | + | chr1.4:78467374-78467393 | None:intergenic | 30.0% |
| ! | ATCTGTCTTTTCACATTTTG+CGG | - | chr1.4:78468133-78468152 | MS.gene41420:intron | 30.0% |
| ! | CCTTTGTACTTGATTTGATA+TGG | - | chr1.4:78467169-78467188 | MS.gene41420:intron | 30.0% |
| ! | CTAACGATTTTCATGTGTTT+TGG | + | chr1.4:78467783-78467802 | None:intergenic | 30.0% |
| ! | GATAATTTGTCTTGTAGACA+TGG | - | chr1.4:78467816-78467835 | MS.gene41420:intron | 30.0% |
| ! | TAATTTTATTCGATCGCTTC+TGG | - | chr1.4:78466957-78466976 | MS.gene41420:intron | 30.0% |
| ! | TATCATCGAAACAGGTTTTA+GGG | + | chr1.4:78467373-78467392 | None:intergenic | 30.0% |
| !!! | GTTTTTTCTAAACTTGAAGG+AGG | + | chr1.4:78467400-78467419 | None:intergenic | 30.0% |
| AACAGAAGTTGTGTTAGAAG+TGG | + | chr1.4:78467619-78467638 | None:intergenic | 35.0% | |
| AAGTTTAGCATGAAACTGGT+TGG | + | chr1.4:78469712-78469731 | None:intergenic | 35.0% | |
| AATCTCTTGATGGAAGTTTG+AGG | + | chr1.4:78467546-78467565 | None:intergenic | 35.0% | |
| AATGAAGAGTTTGACGGTAT+GGG | - | chr1.4:78469398-78469417 | MS.gene41420:intron | 35.0% | |
| AATGAATTTGAGCATCACAC+AGG | + | chr1.4:78467907-78467926 | None:intergenic | 35.0% | |
| ACAGAAGTTGTGTTAGAAGT+GGG | + | chr1.4:78467618-78467637 | None:intergenic | 35.0% | |
| AGAAAATTGACTAGCAAGCT+TGG | - | chr1.4:78470068-78470087 | MS.gene41420:intron | 35.0% | |
| AGACACATAATATGAGACAG+AGG | - | chr1.4:78469157-78469176 | MS.gene41420:intron | 35.0% | |
| AGTGTAAAAACTAAATGGCC+AGG | + | chr1.4:78469737-78469756 | None:intergenic | 35.0% | |
| AGTTTAGCATGAAACTGGTT+GGG | + | chr1.4:78469711-78469730 | None:intergenic | 35.0% | |
| ATAATGCTACAATGGATGAG+TGG | + | chr1.4:78468473-78468492 | None:intergenic | 35.0% | |
| ATTCCCATCACAAATTACCT+TGG | + | chr1.4:78470300-78470319 | None:intergenic | 35.0% | |
| ATTTATCTGAATTGAAGGGC+TGG | - | chr1.4:78468828-78468847 | MS.gene41420:intron | 35.0% | |
| CATGGGTCAAATTGTACAAA+TGG | + | chr1.4:78468696-78468715 | None:intergenic | 35.0% | |
| CATTTGGATCGGTTAAATGA+AGG | + | chr1.4:78467250-78467269 | None:intergenic | 35.0% | |
| CATTTGTACAATTTGACCCA+TGG | - | chr1.4:78468694-78468713 | MS.gene41420:intron | 35.0% | |
| CCCGTATTAATAGTAGTTAG+TGG | - | chr1.4:78469035-78469054 | MS.gene41420:intron | 35.0% | |
| CCTTGTTCACTTATCTGAAA+GGG | - | chr1.4:78470412-78470431 | MS.gene41420:intron | 35.0% | |
| CGGAATTTATGGAGCAAATA+TGG | - | chr1.4:78469320-78469339 | MS.gene41420:CDS | 35.0% | |
| CTAAGGTAACCTTCACAATA+AGG | - | chr1.4:78469243-78469262 | MS.gene41420:intron | 35.0% | |
| CTCTACAGAAATAATAGGAC+AGG | + | chr1.4:78469785-78469804 | None:intergenic | 35.0% | |
| CTTATTGTGAAGGTTACCTT+AGG | + | chr1.4:78469245-78469264 | None:intergenic | 35.0% | |
| GACACATAATATGAGACAGA+GGG | - | chr1.4:78469158-78469177 | MS.gene41420:intron | 35.0% | |
| GCAAAATGTGAAAAGACAGA+TGG | + | chr1.4:78468134-78468153 | None:intergenic | 35.0% | |
| GCTTGCAGTAAAATTCTATG+AGG | - | chr1.4:78469342-78469361 | MS.gene41420:intron | 35.0% | |
| TAAAGCATAAAGCTGAGACA+TGG | + | chr1.4:78469839-78469858 | None:intergenic | 35.0% | |
| TAACTCCAGTTCTTTCTTGA+TGG | - | chr1.4:78468219-78468238 | MS.gene41420:intron | 35.0% | |
| TAAGCATACACCAATAGAAC+TGG | + | chr1.4:78470348-78470367 | None:intergenic | 35.0% | |
| TAATGAAGAGTTTGACGGTA+TGG | - | chr1.4:78469397-78469416 | MS.gene41420:intron | 35.0% | |
| TATGTGTTTACTACCTGAGA+GGG | + | chr1.4:78466787-78466806 | None:intergenic | 35.0% | |
| TCCTCATATAACAAAACCCA+AGG | - | chr1.4:78470280-78470299 | MS.gene41420:intron | 35.0% | |
| TCCTTGTTCACTTATCTGAA+AGG | - | chr1.4:78470411-78470430 | MS.gene41420:intron | 35.0% | |
| TCTATGACAATGTTCAGGTA+CGG | - | chr1.4:78470489-78470508 | MS.gene41420:CDS | 35.0% | |
| TCTTGTATTGCCAGTTCTAT+TGG | - | chr1.4:78470335-78470354 | MS.gene41420:intron | 35.0% | |
| TGAACTCTATGACAATGTTC+AGG | - | chr1.4:78470484-78470503 | MS.gene41420:CDS | 35.0% | |
| TGCAAGCATCTCATTTAAGT+TGG | - | chr1.4:78468943-78468962 | MS.gene41420:intron | 35.0% | |
| TTCCCATCACAAATTACCTT+GGG | + | chr1.4:78470299-78470318 | None:intergenic | 35.0% | |
| TTGCCCCAAAGTTTATCTAT+AGG | - | chr1.4:78468575-78468594 | MS.gene41420:intron | 35.0% | |
| ! | AAACCCAAGGTAATTTGTGA+TGG | - | chr1.4:78470293-78470312 | MS.gene41420:intron | 35.0% |
| ! | AACCCAAGGTAATTTGTGAT+GGG | - | chr1.4:78470294-78470313 | MS.gene41420:intron | 35.0% |
| ! | AACTGGTTGGGTTTGTTTAA+AGG | + | chr1.4:78469699-78469718 | None:intergenic | 35.0% |
| ! | ACTGGTTGGGTTTGTTTAAA+GGG | + | chr1.4:78469698-78469717 | None:intergenic | 35.0% |
| ! | ATATCCTTAAAAAAGGGCGT+GGG | + | chr1.4:78469600-78469619 | None:intergenic | 35.0% |
| ! | GCAAGCATCTCATTTAAGTT+GGG | - | chr1.4:78468944-78468963 | MS.gene41420:intron | 35.0% |
| ! | TAAAGGGGAGTTTTCCATTA+TGG | + | chr1.4:78469682-78469701 | None:intergenic | 35.0% |
| ! | TCATATGTGTTGTTGCTGTT+AGG | - | chr1.4:78467274-78467293 | MS.gene41420:intron | 35.0% |
| ! | TTTTCACATTTTGCGGAATC+AGG | - | chr1.4:78468140-78468159 | MS.gene41420:intron | 35.0% |
| !! | AAATGGATTACTAGATGTGC+TGG | + | chr1.4:78469222-78469241 | None:intergenic | 35.0% |
| !!! | ACCTTGGGTTTTGTTATATG+AGG | + | chr1.4:78470284-78470303 | None:intergenic | 35.0% |
| !!! | AGCAAGCAGTTTCAAGTTTT+TGG | + | chr1.4:78470453-78470472 | None:intergenic | 35.0% |
| !!! | GCAAGCAGTTTCAAGTTTTT+GGG | + | chr1.4:78470452-78470471 | None:intergenic | 35.0% |
| !!! | TTGGGTTTTGTTATATGAGG+AGG | + | chr1.4:78470281-78470300 | None:intergenic | 35.0% |
| AACAACTAATGGCCAATCGT+CGG | + | chr1.4:78469369-78469388 | None:intergenic | 40.0% | |
| AAGACAGATGGTTGTGTATC+AGG | + | chr1.4:78468122-78468141 | None:intergenic | 40.0% | |
| AAGACTCTCCCTCTCAAAAT+GGG | + | chr1.4:78469515-78469534 | None:intergenic | 40.0% | |
| AAGTTGTGTTAGAAGTGGGA+TGG | + | chr1.4:78467614-78467633 | None:intergenic | 40.0% | |
| ACAATGTTCAGGTACGGTTA+CGG | - | chr1.4:78470495-78470514 | MS.gene41420:CDS | 40.0% | |
| ACCCACAAGTTTGAATCCTA+TGG | - | chr1.4:78468649-78468668 | MS.gene41420:intron | 40.0% | |
| AGCCATAGGATTCAAACTTG+TGG | + | chr1.4:78468654-78468673 | None:intergenic | 40.0% | |
| AGTTAGTGGAGTAGTTAGCT+GGG | - | chr1.4:78469049-78469068 | MS.gene41420:intron | 40.0% | |
| CAAACTTGTGGGTGAAATAG+AGG | + | chr1.4:78468642-78468661 | None:intergenic | 40.0% | |
| CAACACATATGAGCAGCATT+TGG | + | chr1.4:78467266-78467285 | None:intergenic | 40.0% | |
| CATATCCTTAAAAAAGGGCG+TGG | + | chr1.4:78469601-78469620 | None:intergenic | 40.0% | |
| CATATGAGCAGCATTTGGAT+CGG | + | chr1.4:78467261-78467280 | None:intergenic | 40.0% | |
| CCCTTTCAGATAAGTGAACA+AGG | + | chr1.4:78470415-78470434 | None:intergenic | 40.0% | |
| CTTGATGGAAGTTTGAGGAA+CGG | + | chr1.4:78467541-78467560 | None:intergenic | 40.0% | |
| GCCATAGGATTCAAACTTGT+GGG | + | chr1.4:78468653-78468672 | None:intergenic | 40.0% | |
| GGACAAGTTTAGCATGAAAC+TGG | + | chr1.4:78469716-78469735 | None:intergenic | 40.0% | |
| GTATGTGTTTACTACCTGAG+AGG | + | chr1.4:78466788-78466807 | None:intergenic | 40.0% | |
| GTGAAGGTTACCTTAGGAAA+TGG | + | chr1.4:78469239-78469258 | None:intergenic | 40.0% | |
| GTGGTCACACTAGACAAAAT+AGG | + | chr1.4:78468420-78468439 | None:intergenic | 40.0% | |
| GTTATATGAGGAGGACAGTA+TGG | + | chr1.4:78470272-78470291 | None:intergenic | 40.0% | |
| GTTTCATGCTAAACTTGTCC+TGG | - | chr1.4:78469716-78469735 | MS.gene41420:intron | 40.0% | |
| TAGGTGAATGTGTTGCAATC+TGG | - | chr1.4:78470216-78470235 | MS.gene41420:intron | 40.0% | |
| TAGTTAGTGGAGTAGTTAGC+TGG | - | chr1.4:78469048-78469067 | MS.gene41420:intron | 40.0% | |
| TGTTTGCATGCACTTATCCT+TGG | - | chr1.4:78470182-78470201 | MS.gene41420:intron | 40.0% | |
| TTAAAGTTGCATGCTAGGAG+AGG | + | chr1.4:78468902-78468921 | None:intergenic | 40.0% | |
| ! | AACACATTTTGCAAACTCCC+AGG | - | chr1.4:78469913-78469932 | MS.gene41420:intron | 40.0% |
| ! | ACTAAGGCTCCCATTGTTTT+GGG | + | chr1.4:78469564-78469583 | None:intergenic | 40.0% |
| ! | AGAAGCATGTGTAGCTCATA+TGG | + | chr1.4:78468290-78468309 | None:intergenic | 40.0% |
| ! | ATTGGGAATTGGGGTTTTCT+AGG | + | chr1.4:78467002-78467021 | None:intergenic | 40.0% |
| ! | CAGAATGCAAGTTTTGCAAG+AGG | + | chr1.4:78468787-78468806 | None:intergenic | 40.0% |
| ! | CTGGTTGGGTTTGTTTAAAG+GGG | + | chr1.4:78469697-78469716 | None:intergenic | 40.0% |
| ! | GAGGTATCTTTCTCCATCTT+AGG | + | chr1.4:78466844-78466863 | None:intergenic | 40.0% |
| ! | GTTAGTTTAGAGGTGAAGGT+TGG | + | chr1.4:78468755-78468774 | None:intergenic | 40.0% |
| ! | TACTAAGGCTCCCATTGTTT+TGG | + | chr1.4:78469565-78469584 | None:intergenic | 40.0% |
| ! | TTCAATGAAGCAGCTGGTTT+AGG | - | chr1.4:78467473-78467492 | MS.gene41420:intron | 40.0% |
| ! | TTGGGAATTGGGGTTTTCTA+GGG | + | chr1.4:78467001-78467020 | None:intergenic | 40.0% |
| !! | CGATTGGCCATTAGTTGTTT+TGG | - | chr1.4:78469370-78469389 | MS.gene41420:intron | 40.0% |
| !!! | TGGGGTTTTCTAGGGTTTTA+GGG | + | chr1.4:78466993-78467012 | None:intergenic | 40.0% |
| !!! | TTGGGGTTTTCTAGGGTTTT+AGG | + | chr1.4:78466994-78467013 | None:intergenic | 40.0% |
| AAGATCTTACCATTCTCCCC+TGG | + | chr1.4:78469952-78469971 | None:intergenic | 45.0% | |
| AAGTTTGAGGAACGGCAACT+GGG | + | chr1.4:78467533-78467552 | None:intergenic | 45.0% | |
| AATGGGCGGCACAATACATA+AGG | + | chr1.4:78469498-78469517 | None:intergenic | 45.0% | |
| AATGTGTTGCAATCTGGTGG+AGG | - | chr1.4:78470222-78470241 | MS.gene41420:intron | 45.0% | |
| ACAACTAATGGCCAATCGTC+GGG | + | chr1.4:78469368-78469387 | None:intergenic | 45.0% | |
| AGTGATAGCAAAACCAGCCA+TGG | + | chr1.4:78467506-78467525 | None:intergenic | 45.0% | |
| ATACACAGAATCTCGAGGGA+AGG | + | chr1.4:78469814-78469833 | None:intergenic | 45.0% | |
| ATCCTTGGCATCTTGCAGAT+AGG | - | chr1.4:78470197-78470216 | MS.gene41420:intron | 45.0% | |
| CAAGACTCTCCCTCTCAAAA+TGG | + | chr1.4:78469516-78469535 | None:intergenic | 45.0% | |
| CAGTAAAATTCCTTCCACGC+TGG | + | chr1.4:78468006-78468025 | None:intergenic | 45.0% | |
| CCATTATCGAGCTACACCTT+CGG | - | chr1.4:78466808-78466827 | MS.gene41420:intron | 45.0% | |
| GAGGACGATATCATCGAAAC+AGG | + | chr1.4:78467381-78467400 | None:intergenic | 45.0% | |
| GCTGGGTTGCAATGCAATAA+AGG | - | chr1.4:78469066-78469085 | MS.gene41420:intron | 45.0% | |
| GGCAATACACAGAATCTCGA+GGG | + | chr1.4:78469818-78469837 | None:intergenic | 45.0% | |
| GTGAATGTGTTGCAATCTGG+TGG | - | chr1.4:78470219-78470238 | MS.gene41420:intron | 45.0% | |
| TGGCAATACACAGAATCTCG+AGG | + | chr1.4:78469819-78469838 | None:intergenic | 45.0% | |
| TGTAATCATACCTGCCAGTC+AGG | + | chr1.4:78470116-78470135 | None:intergenic | 45.0% | |
| TGTGTTAGAAGTGGGATGGT+TGG | + | chr1.4:78467610-78467629 | None:intergenic | 45.0% | |
| TTTGAGCATCACACAGGACA+AGG | + | chr1.4:78467901-78467920 | None:intergenic | 45.0% | |
| ! | ACATTTGAAGTTTGGGGGGA+GGG | + | chr1.4:78468058-78468077 | None:intergenic | 45.0% |
| ! | ACATTTTGCAAACTCCCAGG+CGG | - | chr1.4:78469916-78469935 | MS.gene41420:intron | 45.0% |
| ! | AGGGGAGTTTTCCATTATGG+CGG | + | chr1.4:78469679-78469698 | None:intergenic | 45.0% |
| ! | CAGCGTGGAAGGAATTTTAC+TGG | - | chr1.4:78468004-78468023 | MS.gene41420:intron | 45.0% |
| ! | CGAAGGTGTAGCTCGATAAT+GGG | + | chr1.4:78466810-78466829 | None:intergenic | 45.0% |
| ! | TACATTTGAAGTTTGGGGGG+AGG | + | chr1.4:78468059-78468078 | None:intergenic | 45.0% |
| ! | TCTGGTTTCAATGAAGCAGC+TGG | - | chr1.4:78467467-78467486 | MS.gene41420:intron | 45.0% |
| !! | AAGCTTGGTGCTAATTCACC+CGG | - | chr1.4:78470083-78470102 | MS.gene41420:intron | 45.0% |
| !! | CATTTTGAGAGGGAGAGTCT+TGG | - | chr1.4:78469514-78469533 | MS.gene41420:intron | 45.0% |
| ACATAAGGCTCTCGCTACTG+AGG | + | chr1.4:78469483-78469502 | None:intergenic | 50.0% | |
| ACTCTCCCTCTCAAAATGGG+CGG | + | chr1.4:78469512-78469531 | None:intergenic | 50.0% | |
| AGGGAGCTGTGCGGAATTTA+TGG | - | chr1.4:78469309-78469328 | MS.gene41420:intron | 50.0% | |
| ATACCTGCCAGTCAGGTACA+AGG | + | chr1.4:78470109-78470128 | None:intergenic | 50.0% | |
| ATTCTATGAGGCCCGACGAT+TGG | - | chr1.4:78469354-78469373 | MS.gene41420:intron | 50.0% | |
| CACCTATCTGCAAGATGCCA+AGG | + | chr1.4:78470202-78470221 | None:intergenic | 50.0% | |
| CTGGTTTAGGCGTTTAGCCA+TGG | - | chr1.4:78467486-78467505 | MS.gene41420:intron | 50.0% | |
| GAAGTTTGAGGAACGGCAAC+TGG | + | chr1.4:78467534-78467553 | None:intergenic | 50.0% | |
| GCCTACAGAATCCAGTTGCA+CGG | - | chr1.4:78469620-78469639 | MS.gene41420:intron | 50.0% | |
| GGGAGGGTAGTCAAGTACTA+AGG | + | chr1.4:78469580-78469599 | None:intergenic | 50.0% | |
| TAGAGGGAGATGTCAGCCAT+AGG | + | chr1.4:78468668-78468687 | None:intergenic | 50.0% | |
| TCCGTGCAACTGGATTCTGT+AGG | + | chr1.4:78469624-78469643 | None:intergenic | 50.0% | |
| TGAGGTTTGGGGAGGGTTAA+AGG | + | chr1.4:78469465-78469484 | None:intergenic | 50.0% | |
| TGGGAGGCTTGAGCATATGT+GGG | + | chr1.4:78468323-78468342 | None:intergenic | 50.0% | |
| TTAGAAGTGGGATGGTTGGC+TGG | + | chr1.4:78467606-78467625 | None:intergenic | 50.0% | |
| TTCCCCCAGCCCAAAACAAT+GGG | - | chr1.4:78469552-78469571 | MS.gene41420:intron | 50.0% | |
| TTGGGAGGCTTGAGCATATG+TGG | + | chr1.4:78468324-78468343 | None:intergenic | 50.0% | |
| TTTAGGCGTTTAGCCATGGC+TGG | - | chr1.4:78467490-78467509 | MS.gene41420:intron | 50.0% | |
| ! | ATTGTGCCGCCCATTTTGAG+AGG | - | chr1.4:78469503-78469522 | MS.gene41420:intron | 50.0% |
| ! | CATTTGAAGTTTGGGGGGAG+GGG | + | chr1.4:78468057-78468076 | None:intergenic | 50.0% |
| ! | CCGAAGGTGTAGCTCGATAA+TGG | + | chr1.4:78466811-78466830 | None:intergenic | 50.0% |
| ! | CCTTAAAAAAGGGCGTGGGA+GGG | + | chr1.4:78469596-78469615 | None:intergenic | 50.0% |
| ! | GTTTGTTGAAGGGAGCTGTG+CGG | - | chr1.4:78469300-78469319 | MS.gene41420:intron | 50.0% |
| ! | TCCTTAAAAAAGGGCGTGGG+AGG | + | chr1.4:78469597-78469616 | None:intergenic | 50.0% |
| !! | TTGTGCCGCCCATTTTGAGA+GGG | - | chr1.4:78469504-78469523 | MS.gene41420:intron | 50.0% |
| ACGAGCAAGACGATCAGCGA+CGG | + | chr1.4:78466866-78466885 | None:intergenic | 55.0% | |
| AGAAGGAATGAGGACCAGCG+TGG | - | chr1.4:78467989-78468008 | MS.gene41420:intron | 55.0% | |
| AGGCTCTCGCTACTGAGGTT+TGG | + | chr1.4:78469478-78469497 | None:intergenic | 55.0% | |
| CGGCACTAAGGAGCCTAAGA+TGG | - | chr1.4:78466828-78466847 | MS.gene41420:intron | 55.0% | |
| CTTCCCCCAGCCCAAAACAA+TGG | - | chr1.4:78469551-78469570 | MS.gene41420:intron | 55.0% | |
| GAGCTACACCTTCGGCACTA+AGG | - | chr1.4:78466816-78466835 | MS.gene41420:intron | 55.0% | |
| GCTCTCGCTACTGAGGTTTG+GGG | + | chr1.4:78469476-78469495 | None:intergenic | 55.0% | |
| GGCTCTCGCTACTGAGGTTT+GGG | + | chr1.4:78469477-78469496 | None:intergenic | 55.0% | |
| GGGAGGCTTGAGCATATGTG+GGG | + | chr1.4:78468322-78468341 | None:intergenic | 55.0% | |
| GTTGCATGCTAGGAGAGGAC+TGG | + | chr1.4:78468897-78468916 | None:intergenic | 55.0% | |
| TCGCTACTGAGGTTTGGGGA+GGG | + | chr1.4:78469472-78469491 | None:intergenic | 55.0% | |
| TGTTCTGGTCTCCGTGCAAC+TGG | + | chr1.4:78469634-78469653 | None:intergenic | 55.0% | |
| ! | ATGGTTGGCTGGCTATCTGG+GGG | + | chr1.4:78467595-78467614 | None:intergenic | 55.0% |
| ! | CATTCTCCCCTGGCTTGAGA+CGG | + | chr1.4:78469942-78469961 | None:intergenic | 55.0% |
| ! | CTTAGGCTCCTTAGTGCCGA+AGG | + | chr1.4:78466827-78466846 | None:intergenic | 55.0% |
| ! | GATGGTTGGCTGGCTATCTG+GGG | + | chr1.4:78467596-78467615 | None:intergenic | 55.0% |
| ! | GGATGGTTGGCTGGCTATCT+GGG | + | chr1.4:78467597-78467616 | None:intergenic | 55.0% |
| !!! | AGGCTCCCATTGTTTTGGGC+TGG | + | chr1.4:78469560-78469579 | None:intergenic | 55.0% |
| !!! | CCCTCCCACGCCCTTTTTTA+AGG | - | chr1.4:78469593-78469612 | MS.gene41420:intron | 55.0% |
| !!! | CTCCCATTGTTTTGGGCTGG+GGG | + | chr1.4:78469557-78469576 | None:intergenic | 55.0% |
| !!! | GCTCCCATTGTTTTGGGCTG+GGG | + | chr1.4:78469558-78469577 | None:intergenic | 55.0% |
| !!! | GGCTCCCATTGTTTTGGGCT+GGG | + | chr1.4:78469559-78469578 | None:intergenic | 55.0% |
| ACCAGAACAGCCCCACCTGT+TGG | - | chr1.4:78469645-78469664 | MS.gene41420:intron | 60.0% | |
| AGCAAGACGATCAGCGACGG+AGG | + | chr1.4:78466863-78466882 | None:intergenic | 60.0% | |
| CCAGAACAGCCCCACCTGTT+GGG | - | chr1.4:78469646-78469665 | MS.gene41420:intron | 60.0% | |
| CGTCTCAAGCCAGGGGAGAA+TGG | - | chr1.4:78469940-78469959 | MS.gene41420:intron | 60.0% | |
| CTCGCTACTGAGGTTTGGGG+AGG | + | chr1.4:78469473-78469492 | None:intergenic | 60.0% | |
| CTGCCAGTCAGGTACAAGGC+CGG | + | chr1.4:78470105-78470124 | None:intergenic | 60.0% | |
| GGAATGAGGACCAGCGTGGA+AGG | - | chr1.4:78467993-78468012 | MS.gene41420:intron | 60.0% | |
| TGCCAGTCAGGTACAAGGCC+GGG | + | chr1.4:78470104-78470123 | None:intergenic | 60.0% | |
| TGGGAGTGGGTCCGCCATAA+TGG | - | chr1.4:78469665-78469684 | MS.gene41420:intron | 60.0% | |
| ! | GGGATGGTTGGCTGGCTATC+TGG | + | chr1.4:78467598-78467617 | None:intergenic | 60.0% |
| ACAGCCCCACCTGTTGGGAG+TGG | - | chr1.4:78469651-78469670 | MS.gene41420:intron | 65.0% | |
| CAGCCCCACCTGTTGGGAGT+GGG | - | chr1.4:78469652-78469671 | MS.gene41420:intron | 65.0% | |
| CCCAACAGGTGGGGCTGTTC+TGG | + | chr1.4:78469649-78469668 | None:intergenic | 65.0% | |
| CGGACCCACTCCCAACAGGT+GGG | + | chr1.4:78469659-78469678 | None:intergenic | 65.0% | |
| GGACCCACTCCCAACAGGTG+GGG | + | chr1.4:78469658-78469677 | None:intergenic | 65.0% | |
| ! | CACCCGGCCTTGTACCTGAC+TGG | - | chr1.4:78470099-78470118 | MS.gene41420:intron | 65.0% |
| ! | CGGCCTTGTACCTGACTGGC+AGG | - | chr1.4:78470103-78470122 | MS.gene41420:intron | 65.0% |
| !! | ATGGCGGACCCACTCCCAAC+AGG | + | chr1.4:78469663-78469682 | None:intergenic | 65.0% |
| AGGCGGCCGTCTCAAGCCAG+GGG | - | chr1.4:78469933-78469952 | MS.gene41420:intron | 70.0% | |
| CAGGCGGCCGTCTCAAGCCA+GGG | - | chr1.4:78469932-78469951 | MS.gene41420:intron | 70.0% | |
| GCGGACCCACTCCCAACAGG+TGG | + | chr1.4:78469660-78469679 | None:intergenic | 70.0% | |
| ! | CTGGCTTGAGACGGCCGCCT+GGG | + | chr1.4:78469933-78469952 | None:intergenic | 70.0% |
| CCAGGCGGCCGTCTCAAGCC+AGG | - | chr1.4:78469931-78469950 | MS.gene41420:intron | 75.0% | |
| ! | CCTGGCTTGAGACGGCCGCC+TGG | + | chr1.4:78469934-78469953 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 78466778 | 78470559 | 78466778 | ID=MS.gene41420 |
| chr1.4 | mRNA | 78466778 | 78470559 | 78466778 | ID=MS.gene41420.t1;Parent=MS.gene41420 |
| chr1.4 | exon | 78470441 | 78470559 | 78470441 | ID=MS.gene41420.t1.exon1;Parent=MS.gene41420.t1 |
| chr1.4 | CDS | 78470441 | 78470559 | 78470441 | ID=cds.MS.gene41420.t1;Parent=MS.gene41420.t1 |
| chr1.4 | exon | 78469312 | 78469357 | 78469312 | ID=MS.gene41420.t1.exon2;Parent=MS.gene41420.t1 |
| chr1.4 | CDS | 78469312 | 78469357 | 78469312 | ID=cds.MS.gene41420.t1;Parent=MS.gene41420.t1 |
| chr1.4 | exon | 78467376 | 78467469 | 78467376 | ID=MS.gene41420.t1.exon3;Parent=MS.gene41420.t1 |
| chr1.4 | CDS | 78467376 | 78467469 | 78467376 | ID=cds.MS.gene41420.t1;Parent=MS.gene41420.t1 |
| chr1.4 | exon | 78467213 | 78467286 | 78467213 | ID=MS.gene41420.t1.exon4;Parent=MS.gene41420.t1 |
| chr1.4 | CDS | 78467213 | 78467286 | 78467213 | ID=cds.MS.gene41420.t1;Parent=MS.gene41420.t1 |
| chr1.4 | exon | 78467036 | 78467122 | 78467036 | ID=MS.gene41420.t1.exon5;Parent=MS.gene41420.t1 |
| chr1.4 | CDS | 78467036 | 78467122 | 78467036 | ID=cds.MS.gene41420.t1;Parent=MS.gene41420.t1 |
| chr1.4 | exon | 78466832 | 78466942 | 78466832 | ID=MS.gene41420.t1.exon6;Parent=MS.gene41420.t1 |
| chr1.4 | CDS | 78466832 | 78466942 | 78466832 | ID=cds.MS.gene41420.t1;Parent=MS.gene41420.t1 |
| chr1.4 | exon | 78466778 | 78466783 | 78466778 | ID=MS.gene41420.t1.exon7;Parent=MS.gene41420.t1 |
| chr1.4 | CDS | 78466778 | 78466783 | 78466778 | ID=cds.MS.gene41420.t1;Parent=MS.gene41420.t1 |
| Gene Sequence |
| Protein sequence |
