Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025692.t1 | XP_013450385.1 | 100 | 219 | 0 | 0 | 1 | 219 | 1 | 219 | 9.20E-104 | 386.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025692.t1 | P49693 | 84.3 | 217 | 23 | 2 | 1 | 215 | 1 | 208 | 7.1e-89 | 328.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025692.t1 | I3SA92 | 100.0 | 219 | 0 | 0 | 1 | 219 | 1 | 219 | 6.6e-104 | 386.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22507 | MS.gene025692 | PPI |
| MS.gene025692 | MS.gene07018 | PPI |
| MS.gene025692 | MS.gene22507 | PPI |
| MS.gene07018 | MS.gene025692 | PPI |
| MS.gene28778 | MS.gene025692 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025692.t1 | MTR_7g108955 | 100.000 | 219 | 0 | 0 | 1 | 219 | 1 | 219 | 3.29e-160 | 441 |
| MS.gene025692.t1 | MTR_7g108955 | 100.000 | 208 | 0 | 0 | 1 | 208 | 1 | 208 | 5.99e-153 | 422 |
| MS.gene025692.t1 | MTR_1g087910 | 98.925 | 186 | 2 | 0 | 1 | 186 | 1 | 186 | 6.10e-123 | 347 |
| MS.gene025692.t1 | MTR_1g087910 | 98.925 | 186 | 2 | 0 | 1 | 186 | 1 | 186 | 8.07e-123 | 347 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025692.t1 | AT3G16780 | 82.791 | 215 | 31 | 3 | 1 | 215 | 1 | 209 | 6.91e-124 | 349 |
| MS.gene025692.t1 | AT1G02780 | 91.489 | 188 | 16 | 0 | 1 | 188 | 1 | 188 | 1.63e-116 | 331 |
| MS.gene025692.t1 | AT4G02230 | 91.489 | 188 | 16 | 0 | 1 | 188 | 1 | 188 | 2.47e-115 | 328 |
| MS.gene025692.t1 | AT4G16030 | 42.953 | 149 | 33 | 7 | 57 | 194 | 6 | 113 | 9.99e-18 | 76.3 |
Find 69 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCACGGCTGGCCTTGTTCT+TGG | 0.184984 | 7.1:+5088360 | None:intergenic |
| TAACCAGCTTCCTTATGTTT+TGG | 0.262188 | 7.1:+5089464 | None:intergenic |
| CTCTCTAGCCTTCTCAGCTT+TGG | 0.269286 | 7.1:+5088417 | None:intergenic |
| CATGTGCTTGTCAATCTTCT+TGG | 0.273354 | 7.1:+5088516 | None:intergenic |
| GAGATTTCGTTAACTTCATT+TGG | 0.301140 | 7.1:+5089593 | None:intergenic |
| GGCCTTGTTCTTGGCACGTT+TGG | 0.315875 | 7.1:+5088369 | None:intergenic |
| ATTATAATACTCACTGGGTC+TGG | 0.332335 | 7.1:+5088104 | None:intergenic |
| TGTGGGAAGCCTTGCCTCTC+TGG | 0.339458 | 7.1:+5088600 | None:intergenic |
| TTGTAAAATGTTTAGGGTCC+TGG | 0.366808 | 7.1:-5088184 | MS.gene025692:intron |
| TTAAGGATGGGTTTATAATC+AGG | 0.382568 | 7.1:-5089444 | MS.gene025692:CDS |
| AAAGGAAGACACTCTGGATA+TGG | 0.389292 | 7.1:-5089364 | MS.gene025692:intron |
| AGTGCGGTCGTGGCAAAGTT+TGG | 0.396257 | 7.1:-5089622 | MS.gene025692:CDS |
| GTTGGCTTTGTTGCAGCAAC+AGG | 0.405850 | 7.1:+5088127 | None:intergenic |
| TGACATGTACATGAAGGTTA+AGG | 0.407532 | 7.1:-5088488 | MS.gene025692:CDS |
| TTTGAATGTGCATAGGTAAG+AGG | 0.427942 | 7.1:-5088630 | MS.gene025692:intron |
| AAACATAAGGAAGCTGGTTA+AGG | 0.436979 | 7.1:-5089461 | MS.gene025692:CDS |
| TGTCAATCTTCTTGGCCTCC+CGG | 0.437210 | 7.1:+5088524 | None:intergenic |
| GACGTTTGCTCCGCAAGTAC+CGG | 0.438844 | 7.1:-5088543 | MS.gene025692:CDS |
| GACCTTGTCTGACCAGTTTG+AGG | 0.454488 | 7.1:-5088392 | MS.gene025692:CDS |
| TCTGCTGGCTTCTCTCCTCC+AGG | 0.456457 | 7.1:+5088166 | None:intergenic |
| AGCGTTCTCAAGTGCGGTCG+TGG | 0.462752 | 7.1:-5089632 | MS.gene025692:CDS |
| ACGAGACCTGGAGTGAATCT+TGG | 0.472398 | 7.1:+5089414 | None:intergenic |
| TAAGAATAAGAGAGTTCTGA+TGG | 0.474240 | 7.1:-5088455 | MS.gene025692:CDS |
| TGGCACGTTTGGCCTCAAAC+TGG | 0.475046 | 7.1:+5088380 | None:intergenic |
| AGCATGCTTCCTCTCACGGC+TGG | 0.480022 | 7.1:+5088348 | None:intergenic |
| TTATAATACTCACTGGGTCT+GGG | 0.483209 | 7.1:+5088105 | None:intergenic |
| GACATGTACATGAAGGTTAA+GGG | 0.489265 | 7.1:-5088487 | MS.gene025692:CDS |
| TCCTAGCATGCTTCCTCTCA+CGG | 0.495294 | 7.1:+5088344 | None:intergenic |
| AATACTCACTGGGTCTGGGT+TGG | 0.502471 | 7.1:+5088109 | None:intergenic |
| AAGAGGAAAGGAAGACACTC+TGG | 0.516416 | 7.1:-5089370 | MS.gene025692:CDS |
| TCTTGGCCTCCCGGTACTTG+CGG | 0.524961 | 7.1:+5088533 | None:intergenic |
| GCAGCACTAGGAGCTTCTGC+TGG | 0.526670 | 7.1:+5088151 | None:intergenic |
| ACGTTTGCTCCGCAAGTACC+GGG | 0.538079 | 7.1:-5088542 | MS.gene025692:CDS |
| CATTCTACGAGCACGAGACC+TGG | 0.539613 | 7.1:+5089402 | None:intergenic |
| ATAAGGAAGCTGGTTAAGGA+TGG | 0.542795 | 7.1:-5089457 | MS.gene025692:CDS |
| CACGCATTCTTCTCATCCAA+AGG | 0.547413 | 7.1:+5088572 | None:intergenic |
| GCCGTGAGAGGAAGCATGCT+AGG | 0.550143 | 7.1:-5088345 | MS.gene025692:CDS |
| TCACAAGTCCAAAGCTGAGA+AGG | 0.552682 | 7.1:-5088425 | MS.gene025692:CDS |
| GTCTCGTGCTCGTAGAATGA+AGG | 0.553438 | 7.1:-5089398 | MS.gene025692:CDS |
| ATGAAGGAAGCTAAGAGGAA+AGG | 0.554411 | 7.1:-5089382 | MS.gene025692:CDS |
| AATGTGCATAGGTAAGAGGA+AGG | 0.560538 | 7.1:-5088626 | MS.gene025692:intron |
| TAAGGAAGCTGGTTAAGGAT+GGG | 0.561785 | 7.1:-5089456 | MS.gene025692:CDS |
| GTAGAATGAAGGAAGCTAAG+AGG | 0.564014 | 7.1:-5089387 | MS.gene025692:CDS |
| GCAGCAACAGGTGCAGCACT+AGG | 0.565218 | 7.1:+5088139 | None:intergenic |
| ACCGCAAAAGAAATCAAAGA+AGG | 0.568261 | 7.1:-5088008 | MS.gene025692:CDS |
| TGAGAGGAAGCATGCTAGGA+GGG | 0.573502 | 7.1:-5088341 | MS.gene025692:CDS |
| AGAACAAGGCCAGCCGTGAG+AGG | 0.576244 | 7.1:-5088357 | MS.gene025692:CDS |
| AGGCCAAAACATAAGGAAGC+TGG | 0.578002 | 7.1:-5089467 | MS.gene025692:CDS |
| ACTTGAGAACGCTGGAAGCG+AGG | 0.578193 | 7.1:+5089642 | None:intergenic |
| TTGCAATTTGAGGGAGACCA+TGG | 0.583099 | 7.1:+5089670 | None:intergenic |
| GGCCAAACGTGCCAAGAACA+AGG | 0.590924 | 7.1:-5088371 | MS.gene025692:CDS |
| GGCCTCAAACTGGTCAGACA+AGG | 0.594906 | 7.1:+5088390 | None:intergenic |
| TAACCTTCATGTACATGTCA+TGG | 0.601477 | 7.1:+5088491 | None:intergenic |
| GACCTGGAGTGAATCTTGGT+GGG | 0.604962 | 7.1:+5089418 | None:intergenic |
| AACCCACCAAGATTCACTCC+AGG | 0.614800 | 7.1:-5089420 | MS.gene025692:CDS |
| TGAAGTTAACGAAATCTCCA+TGG | 0.615795 | 7.1:-5089588 | MS.gene025692:CDS |
| AGACCTGGAGTGAATCTTGG+TGG | 0.619616 | 7.1:+5089417 | None:intergenic |
| ACGACCGCACTTGAGAACGC+TGG | 0.620586 | 7.1:+5089634 | None:intergenic |
| GTGAGAGGAAGCATGCTAGG+AGG | 0.624464 | 7.1:-5088342 | MS.gene025692:CDS |
| GCTTCCAGCGTTCTCAAGTG+CGG | 0.631493 | 7.1:-5089638 | MS.gene025692:CDS |
| TAAAATGTTTAGGGTCCTGG+AGG | 0.638656 | 7.1:-5088181 | MS.gene025692:intron |
| CAAGCAATCTCAGACTGCAG+CGG | 0.641887 | 7.1:+5087985 | None:intergenic |
| TAGCTTACGAGAATTAGCCA+TGG | 0.650085 | 7.1:+5089571 | None:intergenic |
| GTACCATGACATGTACATGA+AGG | 0.655137 | 7.1:-5088494 | MS.gene025692:CDS |
| GAGGAAGCATGCTAGGAGGG+AGG | 0.658603 | 7.1:-5088338 | MS.gene025692:CDS |
| GGAAGGGTACCAGAGAGGCA+AGG | 0.658732 | 7.1:-5088609 | MS.gene025692:CDS |
| TAAGAGGAAGGGTACCAGAG+AGG | 0.678708 | 7.1:-5088614 | MS.gene025692:CDS |
| ATGTGCATAGGTAAGAGGAA+GGG | 0.705490 | 7.1:-5088625 | MS.gene025692:intron |
| TTTGCTCCGCAAGTACCGGG+AGG | 0.725507 | 7.1:-5088539 | MS.gene025692:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTATAAACAAACAAAA+TGG | + | chr7.1:5088465-5088484 | None:intergenic | 10.0% |
| !!! | ATTCTTTTTGAAATTATTAA+TGG | - | chr7.1:5089439-5089458 | MS.gene025692:CDS | 10.0% |
| !! | AATAAATTATAATACTCACT+GGG | + | chr7.1:5089566-5089585 | None:intergenic | 15.0% |
| !! | ATATATTTCAGTTTACAAAA+TGG | - | chr7.1:5088777-5088796 | MS.gene025692:intron | 15.0% |
| !! | ATCTATTCTTATTATGATTT+AGG | - | chr7.1:5088362-5088381 | MS.gene025692:CDS | 15.0% |
| !! | TAATAATTGTTTGAAAACTA+TGG | - | chr7.1:5088812-5088831 | MS.gene025692:intron | 15.0% |
| !!! | TTTTCTTTGTAAAATGTTTA+GGG | - | chr7.1:5089472-5089491 | MS.gene025692:intron | 15.0% |
| !! | AAAGAATTTCAAGAAATCAT+AGG | + | chr7.1:5089373-5089392 | None:intergenic | 20.0% |
| !! | GAATAAATTATAATACTCAC+TGG | + | chr7.1:5089567-5089586 | None:intergenic | 20.0% |
| !!! | AAAGTTGATTTTGATTTTGT+AGG | - | chr7.1:5088175-5088194 | MS.gene025692:intron | 20.0% |
| !!! | CTAAACATTTTACAAAGAAA+AGG | + | chr7.1:5089473-5089492 | None:intergenic | 20.0% |
| !!! | CTTTTCTTTGTAAAATGTTT+AGG | - | chr7.1:5089471-5089490 | MS.gene025692:intron | 20.0% |
| !!! | TCATATTTTACAAAACAACA+TGG | + | chr7.1:5088923-5088942 | None:intergenic | 20.0% |
| !!! | TGAAATATATTTTGTTGTGA+CGG | + | chr7.1:5088767-5088786 | None:intergenic | 20.0% |
| ! | ACATAGATGTATATGATTTG+AGG | - | chr7.1:5089397-5089416 | MS.gene025692:CDS | 25.0% |
| ! | GAAATACGAGTTTACATTTA+TGG | - | chr7.1:5088943-5088962 | MS.gene025692:intron | 25.0% |
| !! | ATTTAAAATGAAGCTAATCG+AGG | + | chr7.1:5088344-5088363 | None:intergenic | 25.0% |
| AAAAACTGTCAACAATTCCA+AGG | + | chr7.1:5088838-5088857 | None:intergenic | 30.0% | |
| GAGATTTCGTTAACTTCATT+TGG | + | chr7.1:5088072-5088091 | None:intergenic | 30.0% | |
| TTAAACAATCATGCATAGCA+GGG | + | chr7.1:5089615-5089634 | None:intergenic | 30.0% | |
| TTTAAACAATCATGCATAGC+AGG | + | chr7.1:5089616-5089635 | None:intergenic | 30.0% | |
| ! | AACTAATCAATCTAAGACAG+TGG | + | chr7.1:5088689-5088708 | None:intergenic | 30.0% |
| ! | ATTTTGTAGGCCAAAACATA+AGG | - | chr7.1:5088188-5088207 | MS.gene025692:intron | 30.0% |
| ! | GGAGTGAAAAGTTAACATTT+TGG | + | chr7.1:5088746-5088765 | None:intergenic | 30.0% |
| ! | TAAGAATAAGAGAGTTCTGA+TGG | - | chr7.1:5089207-5089226 | MS.gene025692:intron | 30.0% |
| ! | TTAAGGATGGGTTTATAATC+AGG | - | chr7.1:5088218-5088237 | MS.gene025692:intron | 30.0% |
| !! | GTTAACATTTTGGTGTGAAA+AGG | + | chr7.1:5088736-5088755 | None:intergenic | 30.0% |
| AAACATAAGGAAGCTGGTTA+AGG | - | chr7.1:5088201-5088220 | MS.gene025692:intron | 35.0% | |
| AAATGAAGCTAATCGAGGTT+AGG | + | chr7.1:5088339-5088358 | None:intergenic | 35.0% | |
| AATGAAGCTAATCGAGGTTA+GGG | + | chr7.1:5088338-5088357 | None:intergenic | 35.0% | |
| ACCGCAAAAGAAATCAAAGA+AGG | - | chr7.1:5089654-5089673 | MS.gene025692:CDS | 35.0% | |
| ACGAGTTTACATTTATGGAC+TGG | - | chr7.1:5088948-5088967 | MS.gene025692:intron | 35.0% | |
| ATTATAATACTCACTGGGTC+TGG | + | chr7.1:5089561-5089580 | None:intergenic | 35.0% | |
| GACATGTACATGAAGGTTAA+GGG | - | chr7.1:5089175-5089194 | MS.gene025692:intron | 35.0% | |
| GTGTTTGTTTGAATGTGCAT+AGG | - | chr7.1:5089025-5089044 | MS.gene025692:intron | 35.0% | |
| TAACCTTCATGTACATGTCA+TGG | + | chr7.1:5089174-5089193 | None:intergenic | 35.0% | |
| TGAAGTTAACGAAATCTCCA+TGG | - | chr7.1:5088074-5088093 | MS.gene025692:intron | 35.0% | |
| TGACATGTACATGAAGGTTA+AGG | - | chr7.1:5089174-5089193 | MS.gene025692:intron | 35.0% | |
| TTACTGAGTTGCTCATCAAT+TGG | - | chr7.1:5088889-5088908 | MS.gene025692:intron | 35.0% | |
| TTATAATACTCACTGGGTCT+GGG | + | chr7.1:5089560-5089579 | None:intergenic | 35.0% | |
| TTGTTTGAAAACTATGGCCT+TGG | - | chr7.1:5088818-5088837 | MS.gene025692:intron | 35.0% | |
| TTTGAATGTGCATAGGTAAG+AGG | - | chr7.1:5089032-5089051 | MS.gene025692:intron | 35.0% | |
| ! | CTCATCCAAAGGATTTTTGT+GGG | + | chr7.1:5089082-5089101 | None:intergenic | 35.0% |
| ! | TAACCAGCTTCCTTATGTTT+TGG | + | chr7.1:5088201-5088220 | None:intergenic | 35.0% |
| ! | TCTCATCCAAAGGATTTTTG+TGG | + | chr7.1:5089083-5089102 | None:intergenic | 35.0% |
| ! | TTGTAAAATGTTTAGGGTCC+TGG | - | chr7.1:5089478-5089497 | MS.gene025692:intron | 35.0% |
| !! | GCCTTCTTTGATTTCTTTTG+CGG | + | chr7.1:5089658-5089677 | None:intergenic | 35.0% |
| AAAGGAAGACACTCTGGATA+TGG | - | chr7.1:5088298-5088317 | MS.gene025692:intron | 40.0% | |
| AATGTGCATAGGTAAGAGGA+AGG | - | chr7.1:5089036-5089055 | MS.gene025692:intron | 40.0% | |
| ATAAGGAAGCTGGTTAAGGA+TGG | - | chr7.1:5088205-5088224 | MS.gene025692:intron | 40.0% | |
| ATATCTCTAGATGACCAGAC+AGG | + | chr7.1:5088987-5089006 | None:intergenic | 40.0% | |
| ATGAAGCTAATCGAGGTTAG+GGG | + | chr7.1:5088337-5088356 | None:intergenic | 40.0% | |
| ATGAAGGAAGCTAAGAGGAA+AGG | - | chr7.1:5088280-5088299 | MS.gene025692:intron | 40.0% | |
| ATGTGCATAGGTAAGAGGAA+GGG | - | chr7.1:5089037-5089056 | MS.gene025692:intron | 40.0% | |
| CATGTGCTTGTCAATCTTCT+TGG | + | chr7.1:5089149-5089168 | None:intergenic | 40.0% | |
| GTACCATGACATGTACATGA+AGG | - | chr7.1:5089168-5089187 | MS.gene025692:intron | 40.0% | |
| GTAGAATGAAGGAAGCTAAG+AGG | - | chr7.1:5088275-5088294 | MS.gene025692:intron | 40.0% | |
| TAAGGAAGCTGGTTAAGGAT+GGG | - | chr7.1:5088206-5088225 | MS.gene025692:intron | 40.0% | |
| TAGCTTACGAGAATTAGCCA+TGG | + | chr7.1:5088094-5088113 | None:intergenic | 40.0% | |
| ! | TAAAATGTTTAGGGTCCTGG+AGG | - | chr7.1:5089481-5089500 | MS.gene025692:intron | 40.0% |
| AACAATCATGCATAGCAGGG+CGG | + | chr7.1:5089612-5089631 | None:intergenic | 45.0% | |
| AAGAGGAAAGGAAGACACTC+TGG | - | chr7.1:5088292-5088311 | MS.gene025692:intron | 45.0% | |
| AGGCCAAAACATAAGGAAGC+TGG | - | chr7.1:5088195-5088214 | MS.gene025692:intron | 45.0% | |
| CACGCATTCTTCTCATCCAA+AGG | + | chr7.1:5089093-5089112 | None:intergenic | 45.0% | |
| GAAGACACTCTGGATATGGT+TGG | - | chr7.1:5088302-5088321 | MS.gene025692:intron | 45.0% | |
| GGCTTCCCACAAAAATCCTT+TGG | - | chr7.1:5089074-5089093 | MS.gene025692:intron | 45.0% | |
| TCACAAGTCCAAAGCTGAGA+AGG | - | chr7.1:5089237-5089256 | MS.gene025692:intron | 45.0% | |
| !! | GAGGCGCTTTTGCAATTTGA+GGG | + | chr7.1:5088004-5088023 | None:intergenic | 45.0% |
| !!! | AATAAATTTTATTTTAAGAT+CGG | + | chr7.1:5088517-5088536 | None:intergenic | 5.0% |
| AACCCACCAAGATTCACTCC+AGG | - | chr7.1:5088242-5088261 | MS.gene025692:intron | 50.0% | |
| AATACTCACTGGGTCTGGGT+TGG | + | chr7.1:5089556-5089575 | None:intergenic | 50.0% | |
| ACGAGACCTGGAGTGAATCT+TGG | + | chr7.1:5088251-5088270 | None:intergenic | 50.0% | |
| AGACCTGGAGTGAATCTTGG+TGG | + | chr7.1:5088248-5088267 | None:intergenic | 50.0% | |
| GACCTGGAGTGAATCTTGGT+GGG | + | chr7.1:5088247-5088266 | None:intergenic | 50.0% | |
| GACCTTGTCTGACCAGTTTG+AGG | - | chr7.1:5089270-5089289 | MS.gene025692:intron | 50.0% | |
| GCTCAAAGCATGTTCCTGTC+TGG | - | chr7.1:5088970-5088989 | MS.gene025692:intron | 50.0% | |
| GTCTCGTGCTCGTAGAATGA+AGG | - | chr7.1:5088264-5088283 | MS.gene025692:intron | 50.0% | |
| TCCTAGCATGCTTCCTCTCA+CGG | + | chr7.1:5089321-5089340 | None:intergenic | 50.0% | |
| TGTCAATCTTCTTGGCCTCC+CGG | + | chr7.1:5089141-5089160 | None:intergenic | 50.0% | |
| ! | CTCTCTAGCCTTCTCAGCTT+TGG | + | chr7.1:5089248-5089267 | None:intergenic | 50.0% |
| ! | TGAGAGGAAGCATGCTAGGA+GGG | - | chr7.1:5089321-5089340 | MS.gene025692:intron | 50.0% |
| !! | CGAGGCGCTTTTGCAATTTG+AGG | + | chr7.1:5088005-5088024 | None:intergenic | 50.0% |
| !! | GTTGGCTTTGTTGCAGCAAC+AGG | + | chr7.1:5089538-5089557 | None:intergenic | 50.0% |
| !! | TAAGAGGAAGGGTACCAGAG+AGG | - | chr7.1:5089048-5089067 | MS.gene025692:intron | 50.0% |
| ACGTTTGCTCCGCAAGTACC+GGG | - | chr7.1:5089120-5089139 | MS.gene025692:intron | 55.0% | |
| ACTTGAGAACGCTGGAAGCG+AGG | + | chr7.1:5088023-5088042 | None:intergenic | 55.0% | |
| AGTGCGGTCGTGGCAAAGTT+TGG | - | chr7.1:5088040-5088059 | MS.gene025692:intron | 55.0% | |
| ATCATGCATAGCAGGGCGGA+AGG | + | chr7.1:5089608-5089627 | None:intergenic | 55.0% | |
| CATTCTACGAGCACGAGACC+TGG | + | chr7.1:5088263-5088282 | None:intergenic | 55.0% | |
| GACGTTTGCTCCGCAAGTAC+CGG | - | chr7.1:5089119-5089138 | MS.gene025692:intron | 55.0% | |
| GCTTCCAGCGTTCTCAAGTG+CGG | - | chr7.1:5088024-5088043 | MS.gene025692:intron | 55.0% | |
| GGCCAAACGTGCCAAGAACA+AGG | - | chr7.1:5089291-5089310 | MS.gene025692:intron | 55.0% | |
| GGCCTCAAACTGGTCAGACA+AGG | + | chr7.1:5089275-5089294 | None:intergenic | 55.0% | |
| TGGCACGTTTGGCCTCAAAC+TGG | + | chr7.1:5089285-5089304 | None:intergenic | 55.0% | |
| ! | GTGAGAGGAAGCATGCTAGG+AGG | - | chr7.1:5089320-5089339 | MS.gene025692:intron | 55.0% |
| !! | GGCCTTGTTCTTGGCACGTT+TGG | + | chr7.1:5089296-5089315 | None:intergenic | 55.0% |
| ACGACCGCACTTGAGAACGC+TGG | + | chr7.1:5088031-5088050 | None:intergenic | 60.0% | |
| AGAACAAGGCCAGCCGTGAG+AGG | - | chr7.1:5089305-5089324 | MS.gene025692:intron | 60.0% | |
| AGCATGCTTCCTCTCACGGC+TGG | + | chr7.1:5089317-5089336 | None:intergenic | 60.0% | |
| AGCGTTCTCAAGTGCGGTCG+TGG | - | chr7.1:5088030-5088049 | MS.gene025692:intron | 60.0% | |
| GCAGCAACAGGTGCAGCACT+AGG | + | chr7.1:5089526-5089545 | None:intergenic | 60.0% | |
| GCAGCACTAGGAGCTTCTGC+TGG | + | chr7.1:5089514-5089533 | None:intergenic | 60.0% | |
| TCTTGGCCTCCCGGTACTTG+CGG | + | chr7.1:5089132-5089151 | None:intergenic | 60.0% | |
| TGTGGGAAGCCTTGCCTCTC+TGG | + | chr7.1:5089065-5089084 | None:intergenic | 60.0% | |
| ! | GAGGAAGCATGCTAGGAGGG+AGG | - | chr7.1:5089324-5089343 | MS.gene025692:intron | 60.0% |
| ! | GCCGTGAGAGGAAGCATGCT+AGG | - | chr7.1:5089317-5089336 | MS.gene025692:intron | 60.0% |
| !! | CTCACGGCTGGCCTTGTTCT+TGG | + | chr7.1:5089305-5089324 | None:intergenic | 60.0% |
| !! | GGAAGGGTACCAGAGAGGCA+AGG | - | chr7.1:5089053-5089072 | MS.gene025692:intron | 60.0% |
| !! | TCTGCTGGCTTCTCTCCTCC+AGG | + | chr7.1:5089499-5089518 | None:intergenic | 60.0% |
| !! | TTTGCTCCGCAAGTACCGGG+AGG | - | chr7.1:5089123-5089142 | MS.gene025692:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 5087994 | 5089690 | 5087994 | ID=MS.gene025692 |
| chr7.1 | mRNA | 5087994 | 5089690 | 5087994 | ID=MS.gene025692.t1;Parent=MS.gene025692 |
| chr7.1 | exon | 5089579 | 5089690 | 5089579 | ID=MS.gene025692.t1.exon1;Parent=MS.gene025692.t1 |
| chr7.1 | CDS | 5089579 | 5089690 | 5089579 | ID=cds.MS.gene025692.t1;Parent=MS.gene025692.t1 |
| chr7.1 | exon | 5089365 | 5089487 | 5089365 | ID=MS.gene025692.t1.exon2;Parent=MS.gene025692.t1 |
| chr7.1 | CDS | 5089365 | 5089487 | 5089365 | ID=cds.MS.gene025692.t1;Parent=MS.gene025692.t1 |
| chr7.1 | exon | 5088324 | 5088637 | 5088324 | ID=MS.gene025692.t1.exon3;Parent=MS.gene025692.t1 |
| chr7.1 | CDS | 5088324 | 5088637 | 5088324 | ID=cds.MS.gene025692.t1;Parent=MS.gene025692.t1 |
| chr7.1 | exon | 5088118 | 5088191 | 5088118 | ID=MS.gene025692.t1.exon4;Parent=MS.gene025692.t1 |
| chr7.1 | CDS | 5088118 | 5088191 | 5088118 | ID=cds.MS.gene025692.t1;Parent=MS.gene025692.t1 |
| chr7.1 | exon | 5087994 | 5088030 | 5087994 | ID=MS.gene025692.t1.exon5;Parent=MS.gene025692.t1 |
| chr7.1 | CDS | 5087994 | 5088030 | 5087994 | ID=cds.MS.gene025692.t1;Parent=MS.gene025692.t1 |
| Gene Sequence |
| Protein sequence |
