Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026174.t1 | XP_013466911.1 | 93.6 | 451 | 25 | 1 | 1 | 447 | 2 | 452 | 1.50E-241 | 845.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026174.t1 | Q99JW2 | 44.8 | 417 | 211 | 6 | 19 | 433 | 1 | 400 | 7.7e-98 | 359.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026174.t1 | A0A072VH72 | 93.6 | 451 | 25 | 1 | 1 | 447 | 2 | 452 | 1.1e-241 | 845.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99939 | MS.gene026174 | PPI |
| MS.gene026174 | MS.gene65894 | PPI |
| MS.gene053778 | MS.gene026174 | PPI |
| MS.gene026174 | MS.gene94073 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026174.t1 | MTR_1g038920 | 96.018 | 452 | 12 | 2 | 1 | 447 | 2 | 452 | 0.0 | 888 |
| MS.gene026174.t1 | MTR_1g038920 | 95.354 | 452 | 12 | 3 | 1 | 447 | 2 | 449 | 0.0 | 876 |
| MS.gene026174.t1 | MTR_1g039010 | 82.183 | 449 | 75 | 2 | 1 | 447 | 1 | 446 | 0.0 | 765 |
| MS.gene026174.t1 | MTR_5g058430 | 56.891 | 341 | 144 | 1 | 85 | 425 | 4 | 341 | 2.58e-142 | 411 |
| MS.gene026174.t1 | MTR_0400s0010 | 98.870 | 177 | 2 | 0 | 234 | 410 | 1 | 177 | 1.17e-126 | 364 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026174.t1 | AT4G38220 | 71.770 | 418 | 110 | 2 | 30 | 447 | 24 | 433 | 0.0 | 629 |
| MS.gene026174.t1 | AT4G38220 | 71.053 | 418 | 110 | 3 | 30 | 447 | 24 | 430 | 0.0 | 619 |
| MS.gene026174.t1 | AT1G44820 | 55.374 | 428 | 183 | 2 | 8 | 435 | 12 | 431 | 0.0 | 521 |
| MS.gene026174.t1 | AT1G44180 | 55.427 | 433 | 186 | 2 | 7 | 435 | 4 | 433 | 0.0 | 518 |
| MS.gene026174.t1 | AT1G44180 | 55.427 | 433 | 186 | 2 | 7 | 435 | 4 | 433 | 0.0 | 518 |
| MS.gene026174.t1 | AT1G44180 | 55.427 | 433 | 186 | 2 | 7 | 435 | 4 | 433 | 0.0 | 518 |
Find 128 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTAAGAGGACTGTTTATT+TGG | 0.186701 | 1.2:+24075749 | MS.gene026174:CDS |
| CGGATACCAATTCGATAGTT+TGG | 0.218338 | 1.2:-24075494 | None:intergenic |
| GGCTGGTGATCAAGGCCGTT+GGG | 0.264666 | 1.2:+24076857 | MS.gene026174:CDS |
| GTTGCCGCAATATGTCTTTC+AGG | 0.272688 | 1.2:+24077549 | MS.gene026174:CDS |
| TCGGAGGAGTGAGTGTAGTT+TGG | 0.278626 | 1.2:-24075432 | None:intergenic |
| CTTCTCCGGATGAGCATTAC+AGG | 0.281836 | 1.2:+24076806 | MS.gene026174:CDS |
| CGGAGGAGTGAGTGTAGTTT+GGG | 0.283516 | 1.2:-24075431 | None:intergenic |
| TTTGGTGATGACTGGTTTCC+CGG | 0.303974 | 1.2:-24078211 | None:intergenic |
| ATCAAGGCCGTTGGGGCTCC+TGG | 0.314301 | 1.2:+24076865 | MS.gene026174:CDS |
| CGTGTTGGATTGCCAGCTAT+TGG | 0.337430 | 1.2:+24078348 | MS.gene026174:CDS |
| TGATTGTGATATTAGAAATT+CGG | 0.353288 | 1.2:-24075451 | None:intergenic |
| GGATACCAATTCGATAGTTT+GGG | 0.365964 | 1.2:-24075493 | None:intergenic |
| ACCAAATAAACAGTCCTCTT+AGG | 0.367447 | 1.2:-24075750 | None:intergenic |
| GTAGTTTGGGGTTGGATGGT+TGG | 0.373313 | 1.2:-24075418 | None:intergenic |
| CTTGATCAAGGCCGGCTTGA+AGG | 0.382373 | 1.2:+24076978 | MS.gene026174:CDS |
| GGGATTGGAACTGTCAGTTT+TGG | 0.383485 | 1.2:-24078229 | None:intergenic |
| CTGTTAGGATTCTTAAAAGT+TGG | 0.386826 | 1.2:+24075718 | MS.gene026174:CDS |
| AGCATGATGGAAGGCAGCTC+CGG | 0.388672 | 1.2:-24075555 | None:intergenic |
| CTGTCAGTGCTTGATGCGTC+CGG | 0.406564 | 1.2:+24078192 | MS.gene026174:CDS |
| CCCGTGGTGGCTGGTGATCA+AGG | 0.408652 | 1.2:+24076849 | MS.gene026174:CDS |
| TTTGCTCCTGATGAGGAGAT+TGG | 0.412203 | 1.2:+24075774 | MS.gene026174:CDS |
| AACCCATCATCATTCTCAAA+TGG | 0.415923 | 1.2:+24075520 | MS.gene026174:CDS |
| TGTTAGGATTCTTAAAAGTT+GGG | 0.416087 | 1.2:+24075719 | MS.gene026174:CDS |
| CGAATCCCAAACTATCGAAT+TGG | 0.420211 | 1.2:+24075488 | MS.gene026174:CDS |
| CAAGTTTCCCACCAGCCTCT+TGG | 0.421248 | 1.2:-24078278 | None:intergenic |
| TGGCTGGTGATCAAGGCCGT+TGG | 0.430324 | 1.2:+24076856 | MS.gene026174:CDS |
| TGGAGTTCCAGCCTTCAAAA+AGG | 0.433167 | 1.2:-24077031 | None:intergenic |
| TGCAGTATCTTGAAGCTGTT+AGG | 0.436357 | 1.2:+24075703 | MS.gene026174:CDS |
| GAGTGAGTGTAGTTTGGGGT+TGG | 0.437234 | 1.2:-24075426 | None:intergenic |
| CAGCCATCTGAAGCAGAAGC+TGG | 0.440378 | 1.2:+24077452 | MS.gene026174:CDS |
| CAAACTATCGAATTGGTATC+CGG | 0.447753 | 1.2:+24075495 | MS.gene026174:CDS |
| CAAGAGGCTGGTGGGAAACT+TGG | 0.447808 | 1.2:+24078279 | MS.gene026174:CDS |
| GCCGTTGGGGCTCCTGGACA+TGG | 0.455669 | 1.2:+24076871 | MS.gene026174:CDS |
| TTGTGATCATGGAGTAGAAT+AGG | 0.455956 | 1.2:-24078393 | None:intergenic |
| AAGTCACCTCATTGTGATCA+TGG | 0.459878 | 1.2:-24078404 | None:intergenic |
| GAGTGTAGTTTGGGGTTGGA+TGG | 0.461362 | 1.2:-24075422 | None:intergenic |
| TAACAATGTCCACCAGGGAT+TGG | 0.464222 | 1.2:-24078244 | None:intergenic |
| GGCCCATTTGAGAATGATGA+TGG | 0.464376 | 1.2:-24075523 | None:intergenic |
| AGGCAGCTCCGGGCTTGTAC+CGG | 0.471073 | 1.2:-24075544 | None:intergenic |
| ACCCATCATCATTCTCAAAT+GGG | 0.471498 | 1.2:+24075521 | MS.gene026174:CDS |
| AGCAGAGTTGTCATAAAGCT+TGG | 0.472153 | 1.2:-24076896 | None:intergenic |
| TAAAGCTTGGAGCCATGTCC+AGG | 0.472960 | 1.2:-24076883 | None:intergenic |
| GCCCACTTATCGTGTTCAGC+GGG | 0.474219 | 1.2:-24075600 | None:intergenic |
| AACGCCCTGTAATGCTCATC+CGG | 0.476649 | 1.2:-24076811 | None:intergenic |
| ACTAACAGGACTGGCTTCTC+CGG | 0.478911 | 1.2:+24076792 | MS.gene026174:intron |
| TGACCACCAATCTCCTCATC+AGG | 0.479072 | 1.2:-24075780 | None:intergenic |
| ACAAAGATGAATACTTGAAA+GGG | 0.479424 | 1.2:+24079359 | MS.gene026174:CDS |
| TTGCCGCAATATGTCTTTCA+GGG | 0.484195 | 1.2:+24077550 | MS.gene026174:CDS |
| CAGTTTGACTTGATCAAGGC+CGG | 0.486990 | 1.2:+24076970 | MS.gene026174:CDS |
| CTCACAGTTTGACTTGATCA+AGG | 0.494700 | 1.2:+24076966 | MS.gene026174:CDS |
| TCCCCGCTGAACACGATAAG+TGG | 0.496566 | 1.2:+24075598 | MS.gene026174:CDS |
| CATGGGCCTTGAAAGGATCA+TGG | 0.497190 | 1.2:-24075623 | None:intergenic |
| AGCTATTGGATTCTCACCTA+TGG | 0.501007 | 1.2:+24078362 | MS.gene026174:CDS |
| CACAAAGATGAATACTTGAA+AGG | 0.501698 | 1.2:+24079358 | MS.gene026174:CDS |
| GATTTATGCAAGAGGGTCAC+AGG | 0.512669 | 1.2:+24075662 | MS.gene026174:CDS |
| GTGGGCCCATGATCCTTTCA+AGG | 0.516268 | 1.2:+24075617 | MS.gene026174:CDS |
| GCTTTATGACAACTCTGCTA+TGG | 0.522983 | 1.2:+24076900 | MS.gene026174:CDS |
| AGAGAGGAGCCCGTGGTGGC+TGG | 0.525075 | 1.2:+24076840 | MS.gene026174:CDS |
| GAAAATGCCGTCCAAGAGGC+TGG | 0.525881 | 1.2:+24078267 | MS.gene026174:CDS |
| CAAATGGGCCGGTACAAGCC+CGG | 0.529793 | 1.2:+24075536 | MS.gene026174:CDS |
| TGTCAGTGCTTGATGCGTCC+GGG | 0.531881 | 1.2:+24078193 | MS.gene026174:CDS |
| CCTTGATCACCAGCCACCAC+GGG | 0.533837 | 1.2:-24076849 | None:intergenic |
| TTCGATGAGCGTGTAAGAGA+TGG | 0.535915 | 1.2:+24079421 | MS.gene026174:CDS |
| ACTGTGAGGCGCGAAACCTT+CGG | 0.536388 | 1.2:-24076951 | None:intergenic |
| ATCTCTTACACGCTCATCGA+AGG | 0.538291 | 1.2:-24079419 | None:intergenic |
| AATGATTCTGCATCAGCGGT+TGG | 0.539171 | 1.2:-24077494 | None:intergenic |
| TGGTGGGAAACTTGGTAAGC+CGG | 0.540180 | 1.2:+24078287 | MS.gene026174:CDS |
| GTTTGACTTACAGTTGGAGA+TGG | 0.540260 | 1.2:-24077051 | None:intergenic |
| AAGGCCCATGTGGATGATGA+AGG | 0.540460 | 1.2:+24075636 | MS.gene026174:CDS |
| GCTCCTGATGAGGAGATTGG+TGG | 0.541895 | 1.2:+24075777 | MS.gene026174:CDS |
| GGCCGGCTTGAAGGCTGAAG+GGG | 0.544594 | 1.2:+24076987 | MS.gene026174:CDS |
| GTGGAAGCAGGAAAGATCTC+CGG | 0.545776 | 1.2:-24078306 | None:intergenic |
| TAGCGTGCATCTGTGGAAGC+AGG | 0.546751 | 1.2:-24078318 | None:intergenic |
| GCATGATGGAAGGCAGCTCC+GGG | 0.548449 | 1.2:-24075554 | None:intergenic |
| GCACGCTATTTCCGCCGTGT+TGG | 0.549497 | 1.2:+24078333 | MS.gene026174:CDS |
| GAGGAGATTGGTGGTCATGA+TGG | 0.557016 | 1.2:+24075786 | MS.gene026174:CDS |
| ATCATCATTCTCAAATGGGC+CGG | 0.560210 | 1.2:+24075525 | MS.gene026174:CDS |
| TCATCCACATGGGCCTTGAA+AGG | 0.560463 | 1.2:-24075630 | None:intergenic |
| CTCTAATGATTCTGCATCAG+CGG | 0.561783 | 1.2:-24077498 | None:intergenic |
| GGATGTTGTTTCTATTAACA+TGG | 0.563003 | 1.2:+24077008 | MS.gene026174:CDS |
| CTATAAGGAAGATGCTTCGA+CGG | 0.563917 | 1.2:-24075305 | None:intergenic |
| ATAGGTGAGAATCCAATAGC+TGG | 0.565736 | 1.2:-24078360 | None:intergenic |
| GCCATGTCCAGGAGCCCCAA+CGG | 0.565920 | 1.2:-24076872 | None:intergenic |
| ATGGGCCTTGAAAGGATCAT+GGG | 0.568107 | 1.2:-24075622 | None:intergenic |
| GCCTTGATCACCAGCCACCA+CGG | 0.571593 | 1.2:-24076850 | None:intergenic |
| AATCCAGCTTCTGCTTCAGA+TGG | 0.575529 | 1.2:-24077455 | None:intergenic |
| AGGCCGGCTTGAAGGCTGAA+GGG | 0.576200 | 1.2:+24076986 | MS.gene026174:CDS |
| AAAGACATATTGCGGCAACT+AGG | 0.577793 | 1.2:-24077545 | None:intergenic |
| AAACTGACAGTTCCAATCCC+TGG | 0.578875 | 1.2:+24078232 | MS.gene026174:CDS |
| GCGGAAATAGCGTGCATCTG+TGG | 0.578906 | 1.2:-24078325 | None:intergenic |
| GCTCTACTCTCACACTGATG+TGG | 0.583803 | 1.2:+24075575 | MS.gene026174:CDS |
| GCCCATTTGAGAATGATGAT+GGG | 0.586294 | 1.2:-24075522 | None:intergenic |
| AGAATAGGAGTGTTTGCCAT+AGG | 0.586699 | 1.2:-24078378 | None:intergenic |
| CCCCGCTGAACACGATAAGT+GGG | 0.588743 | 1.2:+24075599 | MS.gene026174:CDS |
| GAGGCGAATTGCTGAAGAGT+GGG | 0.592628 | 1.2:+24077520 | MS.gene026174:CDS |
| GCTGGTGATCAAGGCCGTTG+GGG | 0.592758 | 1.2:+24076858 | MS.gene026174:CDS |
| AAGGCCGGCTTGAAGGCTGA+AGG | 0.594320 | 1.2:+24076985 | MS.gene026174:CDS |
| ATCCCCTTCAGCCTTCAAGC+CGG | 0.595969 | 1.2:-24076989 | None:intergenic |
| GATTCTGCATCAGCGGTTGG+TGG | 0.596145 | 1.2:-24077491 | None:intergenic |
| GGCCCACTTATCGTGTTCAG+CGG | 0.600944 | 1.2:-24075601 | None:intergenic |
| TTACCCTGAAAGACATATTG+CGG | 0.602668 | 1.2:-24077553 | None:intergenic |
| TTTCCCACCAGCCTCTTGGA+CGG | 0.602992 | 1.2:-24078274 | None:intergenic |
| TCTTTCCTTCATCATCCACA+TGG | 0.604937 | 1.2:-24075641 | None:intergenic |
| TGAGAGTAGAGCATGATGGA+AGG | 0.606271 | 1.2:-24075564 | None:intergenic |
| TTGTGATATTAGAAATTCGG+AGG | 0.612007 | 1.2:-24075448 | None:intergenic |
| GTTGGTATAGTGCTTGATGA+AGG | 0.613803 | 1.2:+24075852 | MS.gene026174:CDS |
| GGAGGAGTGAGTGTAGTTTG+GGG | 0.625409 | 1.2:-24075430 | None:intergenic |
| ATGCCGTCCAAGAGGCTGGT+GGG | 0.625534 | 1.2:+24078271 | MS.gene026174:CDS |
| AGAGGCGAATTGCTGAAGAG+TGG | 0.635118 | 1.2:+24077519 | MS.gene026174:CDS |
| AGAGTATTGAAAGCATCCGA+AGG | 0.637964 | 1.2:+24076935 | MS.gene026174:CDS |
| GTTAGAAAATGCCGTCCAAG+AGG | 0.638365 | 1.2:+24078263 | MS.gene026174:CDS |
| AAGGAAAGATTTATGCAAGA+GGG | 0.638944 | 1.2:+24075655 | MS.gene026174:CDS |
| AATGCCGTCCAAGAGGCTGG+TGG | 0.639864 | 1.2:+24078270 | MS.gene026174:CDS |
| CTTTCCTTCATCATCCACAT+GGG | 0.643468 | 1.2:-24075640 | None:intergenic |
| AGTGTGAGAGTAGAGCATGA+TGG | 0.643646 | 1.2:-24075568 | None:intergenic |
| CAATAGCTGGCAATCCAACA+CGG | 0.647252 | 1.2:-24078347 | None:intergenic |
| GAAGGAAAGATTTATGCAAG+AGG | 0.648462 | 1.2:+24075654 | MS.gene026174:CDS |
| ATGCAGAGAGGAGCCCGTGG+TGG | 0.659419 | 1.2:+24076836 | MS.gene026174:CDS |
| TTCTCCGGATGAGCATTACA+GGG | 0.659788 | 1.2:+24076807 | MS.gene026174:CDS |
| TCTATGCAGAGAGGAGCCCG+TGG | 0.664265 | 1.2:+24076833 | MS.gene026174:CDS |
| CTGATGCAGAATCATTAGAG+AGG | 0.675563 | 1.2:+24077501 | MS.gene026174:CDS |
| TCTACTCCATGATCACAATG+AGG | 0.678632 | 1.2:+24078398 | MS.gene026174:CDS |
| CCCACTTATCGTGTTCAGCG+GGG | 0.684897 | 1.2:-24075599 | None:intergenic |
| TGATCCTTTCAAGGCCCATG+TGG | 0.688332 | 1.2:+24075626 | MS.gene026174:CDS |
| CTTGATCAAGTCAAACTGTG+AGG | 0.692029 | 1.2:-24076965 | None:intergenic |
| ACAGGGCGTTCTATGCAGAG+AGG | 0.731851 | 1.2:+24076824 | MS.gene026174:CDS |
| CTGACAGTTCCAATCCCTGG+TGG | 0.744973 | 1.2:+24078235 | MS.gene026174:CDS |
| TAGCTGGCAATCCAACACGG+CGG | 0.800830 | 1.2:-24078344 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGACATTTTTTAAATTATTA+TGG | + | chr1.2:24077977-24077996 | MS.gene026174:intron | 10.0% |
| !! | ATGATAAATATAAAGCATAA+TGG | - | chr1.2:24077591-24077610 | None:intergenic | 15.0% |
| !! | TTTGTAAGTGAATAAAAAAT+TGG | - | chr1.2:24076773-24076792 | None:intergenic | 15.0% |
| !! | AATGATAGAAATATTTCCTA+TGG | - | chr1.2:24077689-24077708 | None:intergenic | 20.0% |
| !! | AATTGGAATGAGTTTAATAA+AGG | - | chr1.2:24076756-24076775 | None:intergenic | 20.0% |
| !! | ATATAAACAACTGAAAAACA+GGG | + | chr1.2:24077866-24077885 | MS.gene026174:intron | 20.0% |
| !! | ATGTTAAATAAATTTACCGT+TGG | + | chr1.2:24076552-24076571 | MS.gene026174:intron | 20.0% |
| !! | ATTTAAGCTTTACATTATAC+AGG | - | chr1.2:24077111-24077130 | None:intergenic | 20.0% |
| !! | TAGATAGTAGAAAAACTATA+AGG | - | chr1.2:24075323-24075342 | None:intergenic | 20.0% |
| !! | TATTACAACATTTCATATCA+TGG | + | chr1.2:24077757-24077776 | MS.gene026174:intron | 20.0% |
| !! | TATTACTATATGACATGAAA+AGG | - | chr1.2:24078960-24078979 | None:intergenic | 20.0% |
| !! | TATTTGAAAGGAAAATTTAG+TGG | + | chr1.2:24076226-24076245 | MS.gene026174:intron | 20.0% |
| !! | TCTTAATACTTCATAGAATT+TGG | + | chr1.2:24078672-24078691 | MS.gene026174:intron | 20.0% |
| !! | TGATTGTGATATTAGAAATT+CGG | - | chr1.2:24075454-24075473 | None:intergenic | 20.0% |
| !!! | AATACTCTTTAATTTCTGTT+AGG | + | chr1.2:24076469-24076488 | MS.gene026174:intron | 20.0% |
| !!! | ATGAAAAGGTATTTATAAGA+GGG | - | chr1.2:24078946-24078965 | None:intergenic | 20.0% |
| !!! | TTAGCTTTTAAGTATTTGAA+AGG | + | chr1.2:24076214-24076233 | MS.gene026174:intron | 20.0% |
| !!! | TTTAGAAAACTGATTTTGAT+AGG | + | chr1.2:24076189-24076208 | MS.gene026174:intron | 20.0% |
| ! | AAAAAAACTTATCTCTGATG+TGG | - | chr1.2:24079064-24079083 | None:intergenic | 25.0% |
| ! | AAAGAACAGCAATTCATATT+TGG | - | chr1.2:24076612-24076631 | None:intergenic | 25.0% |
| ! | AACTCAAATATCTAAATCTG+CGG | - | chr1.2:24076161-24076180 | None:intergenic | 25.0% |
| ! | AAGAAAGATAGAATCATTAG+TGG | - | chr1.2:24077400-24077419 | None:intergenic | 25.0% |
| ! | ACAAAGATGAATACTTGAAA+GGG | + | chr1.2:24079359-24079378 | MS.gene026174:CDS | 25.0% |
| ! | ACAAAGTAGAAGATTTCATT+AGG | + | chr1.2:24076025-24076044 | MS.gene026174:intron | 25.0% |
| ! | ACTATGTCCTAGTTAATATA+AGG | + | chr1.2:24078538-24078557 | MS.gene026174:intron | 25.0% |
| ! | AGAAAGATAGAATCATTAGT+GGG | - | chr1.2:24077399-24077418 | None:intergenic | 25.0% |
| ! | ATACAACCAAAAAGAACATA+AGG | - | chr1.2:24079253-24079272 | None:intergenic | 25.0% |
| ! | ATGAAAATGTGTTCATAAGT+GGG | - | chr1.2:24078738-24078757 | None:intergenic | 25.0% |
| ! | ATTTATAGTCTGTTAAAGTG+AGG | + | chr1.2:24075893-24075912 | MS.gene026174:intron | 25.0% |
| ! | CATATAAACAACTGAAAAAC+AGG | + | chr1.2:24077865-24077884 | MS.gene026174:intron | 25.0% |
| ! | GTAGTAGATAATGAAAATGA+TGG | + | chr1.2:24078012-24078031 | MS.gene026174:intron | 25.0% |
| ! | TAATCCAATTGTTGCATATT+CGG | + | chr1.2:24079005-24079024 | MS.gene026174:intron | 25.0% |
| ! | TATTAAGAAACATGTCAACA+TGG | - | chr1.2:24078660-24078679 | None:intergenic | 25.0% |
| ! | TATTGTGTATTTACAAGACA+TGG | - | chr1.2:24077614-24077633 | None:intergenic | 25.0% |
| ! | TCAACATGGAAACAAAATAA+AGG | - | chr1.2:24078646-24078665 | None:intergenic | 25.0% |
| ! | TGTGAAATGTATCATTTCAA+AGG | - | chr1.2:24077326-24077345 | None:intergenic | 25.0% |
| ! | TGTTAGGATTCTTAAAAGTT+GGG | + | chr1.2:24075719-24075738 | MS.gene026174:CDS | 25.0% |
| ! | TTATTCACTTACAAACTAAC+AGG | + | chr1.2:24076778-24076797 | MS.gene026174:intron | 25.0% |
| ! | TTTCGATTATATTCTACTCA+TGG | - | chr1.2:24077213-24077232 | None:intergenic | 25.0% |
| !! | ATGAAAGCCTTATATTAACT+AGG | - | chr1.2:24078548-24078567 | None:intergenic | 25.0% |
| !! | TTCATCTTTTCTATGTGAAA+AGG | + | chr1.2:24077801-24077820 | MS.gene026174:intron | 25.0% |
| !!! | CATGAAAAGGTATTTATAAG+AGG | - | chr1.2:24078947-24078966 | None:intergenic | 25.0% |
| !!! | GGTAATTTGTTCTCAAAAAA+TGG | - | chr1.2:24078119-24078138 | None:intergenic | 25.0% |
| !!! | TCCTCTAATATATTTTAGCT+CGG | + | chr1.2:24078153-24078172 | MS.gene026174:intron | 25.0% |
| AAAAATTGTAGAGAACACGA+AGG | - | chr1.2:24077783-24077802 | None:intergenic | 30.0% | |
| AAGGAAAGATTTATGCAAGA+GGG | + | chr1.2:24075655-24075674 | MS.gene026174:CDS | 30.0% | |
| AATCACATTTGTCTCAAGAA+AGG | - | chr1.2:24076442-24076461 | None:intergenic | 30.0% | |
| ACACAATAATCTCAGCTAAT+AGG | + | chr1.2:24077626-24077645 | MS.gene026174:intron | 30.0% | |
| ATGTGAAAAGGCTAATGTTA+TGG | + | chr1.2:24077813-24077832 | MS.gene026174:intron | 30.0% | |
| ATTATTATGGAGAAAGCAAG+AGG | + | chr1.2:24077990-24078009 | MS.gene026174:intron | 30.0% | |
| CACAAAGATGAATACTTGAA+AGG | + | chr1.2:24079358-24079377 | MS.gene026174:CDS | 30.0% | |
| CAGAACATTGATATGATAAG+AGG | - | chr1.2:24077263-24077282 | None:intergenic | 30.0% | |
| CATGAAAATGTGTTCATAAG+TGG | - | chr1.2:24078739-24078758 | None:intergenic | 30.0% | |
| CTATAGAAATTTGTAGCCAT+AGG | + | chr1.2:24077670-24077689 | MS.gene026174:intron | 30.0% | |
| CTGTTAGGATTCTTAAAAGT+TGG | + | chr1.2:24075718-24075737 | MS.gene026174:CDS | 30.0% | |
| GAAAGATAGAATCATTAGTG+GGG | - | chr1.2:24077398-24077417 | None:intergenic | 30.0% | |
| GACATGTTTGATGAATTTGA+TGG | - | chr1.2:24077089-24077108 | None:intergenic | 30.0% | |
| TAAGCATACTAGCATCAATT+AGG | - | chr1.2:24078447-24078466 | None:intergenic | 30.0% | |
| TAGAGGAAGAATCTAATAAG+AGG | - | chr1.2:24078140-24078159 | None:intergenic | 30.0% | |
| TATCATTTCAAAGGTAAGCA+TGG | - | chr1.2:24077317-24077336 | None:intergenic | 30.0% | |
| TCCTTGTACAGAAAATATTC+AGG | + | chr1.2:24078610-24078629 | MS.gene026174:intron | 30.0% | |
| TGATGAATTTGATGGAGTAT+TGG | - | chr1.2:24077081-24077100 | None:intergenic | 30.0% | |
| TGTTCTGTTATACATTTGAG+TGG | + | chr1.2:24077276-24077295 | MS.gene026174:intron | 30.0% | |
| TTGTGATATTAGAAATTCGG+AGG | - | chr1.2:24075451-24075470 | None:intergenic | 30.0% | |
| TTTCAGTTATAGTCAAACCA+AGG | - | chr1.2:24076517-24076536 | None:intergenic | 30.0% | |
| ! | AATGTTATGGTTGATGCATT+TGG | + | chr1.2:24077826-24077845 | MS.gene026174:intron | 30.0% |
| ! | ACCTGAATATTTTCTGTACA+AGG | - | chr1.2:24078614-24078633 | None:intergenic | 30.0% |
| ! | ATCACCAAATTAGTGTGTTT+TGG | - | chr1.2:24076694-24076713 | None:intergenic | 30.0% |
| ! | ATGTTATGGTTGATGCATTT+GGG | + | chr1.2:24077827-24077846 | MS.gene026174:intron | 30.0% |
| ! | CACTTATGAACACATTTTCA+TGG | + | chr1.2:24078737-24078756 | MS.gene026174:intron | 30.0% |
| ! | TATGCACCTTATGTTCTTTT+TGG | + | chr1.2:24079244-24079263 | MS.gene026174:intron | 30.0% |
| ! | TATTAACATGGCCTTTTTGA+AGG | + | chr1.2:24077020-24077039 | MS.gene026174:CDS | 30.0% |
| ! | TTTTACAGAACACAAAGTTG+AGG | - | chr1.2:24079144-24079163 | None:intergenic | 30.0% |
| !! | AAAAGGTATTTATAAGAGGG+AGG | - | chr1.2:24078943-24078962 | None:intergenic | 30.0% |
| !! | GGATGTTGTTTCTATTAACA+TGG | + | chr1.2:24077008-24077027 | MS.gene026174:CDS | 30.0% |
| !! | TTAGTTAGTCTCTTTTGCTA+TGG | + | chr1.2:24079030-24079049 | MS.gene026174:intron | 30.0% |
| !!! | ACAAGTGTTTGGTTTTACAT+TGG | + | chr1.2:24076399-24076418 | MS.gene026174:intron | 30.0% |
| !!! | CCTCTAATATATTTTAGCTC+GGG | + | chr1.2:24078154-24078173 | MS.gene026174:intron | 30.0% |
| !!! | TTTTGATTTGTAGGTATTGC+TGG | - | chr1.2:24075398-24075417 | None:intergenic | 30.0% |
| AAAGCCGAATATGCAACAAT+TGG | - | chr1.2:24079012-24079031 | None:intergenic | 35.0% | |
| AAAGGTAAGCATGGCATTAT+TGG | - | chr1.2:24077308-24077327 | None:intergenic | 35.0% | |
| AACCCATCATCATTCTCAAA+TGG | + | chr1.2:24075520-24075539 | MS.gene026174:CDS | 35.0% | |
| ACCAAATAAACAGTCCTCTT+AGG | - | chr1.2:24075753-24075772 | None:intergenic | 35.0% | |
| ACCCATCATCATTCTCAAAT+GGG | + | chr1.2:24075521-24075540 | MS.gene026174:CDS | 35.0% | |
| ACCTTACAAATCAGTTTCGT+AGG | - | chr1.2:24078704-24078723 | None:intergenic | 35.0% | |
| ACTCTTGTGATGCATGTTTA+TGG | - | chr1.2:24079104-24079123 | None:intergenic | 35.0% | |
| AGTTGCACAATTACAGTCAT+CGG | - | chr1.2:24077947-24077966 | None:intergenic | 35.0% | |
| ATTGTGTAACCACAATGTTC+TGG | - | chr1.2:24079216-24079235 | None:intergenic | 35.0% | |
| CAAACTATCGAATTGGTATC+CGG | + | chr1.2:24075495-24075514 | MS.gene026174:CDS | 35.0% | |
| CAAGTCAATGTTCCAAAGTT+AGG | - | chr1.2:24076723-24076742 | None:intergenic | 35.0% | |
| CAAGTTAGATGCTAAACCAA+CGG | - | chr1.2:24076571-24076590 | None:intergenic | 35.0% | |
| CCCGAGCTAAAATATATTAG+AGG | - | chr1.2:24078157-24078176 | None:intergenic | 35.0% | |
| CCTTACAAATCAGTTTCGTA+GGG | - | chr1.2:24078703-24078722 | None:intergenic | 35.0% | |
| CTCACCAAAACACACTAATT+TGG | + | chr1.2:24076687-24076706 | MS.gene026174:intron | 35.0% | |
| CTGTTAGGCAAACTTGATTT+CGG | + | chr1.2:24076484-24076503 | MS.gene026174:intron | 35.0% | |
| GAAGGAAAGATTTATGCAAG+AGG | + | chr1.2:24075654-24075673 | MS.gene026174:CDS | 35.0% | |
| GCTAATCAAAAGCTACACTT+TGG | - | chr1.2:24076337-24076356 | None:intergenic | 35.0% | |
| GGATACCAATTCGATAGTTT+GGG | - | chr1.2:24075496-24075515 | None:intergenic | 35.0% | |
| GTTATAGTCAAACCAAGGTT+TGG | - | chr1.2:24076512-24076531 | None:intergenic | 35.0% | |
| TAAGTCATGTCATTGTCTGT+AGG | + | chr1.2:24078470-24078489 | MS.gene026174:intron | 35.0% | |
| TTACCCTGAAAGACATATTG+CGG | - | chr1.2:24077556-24077575 | None:intergenic | 35.0% | |
| TTGTGATCATGGAGTAGAAT+AGG | - | chr1.2:24078396-24078415 | None:intergenic | 35.0% | |
| ! | ATTTTCTAACAATGTCCACC+AGG | - | chr1.2:24078253-24078272 | None:intergenic | 35.0% |
| ! | GCAGTAGATTTGTTTGAGTT+GGG | + | chr1.2:24079165-24079184 | MS.gene026174:intron | 35.0% |
| ! | GCTTAAATTATAGTTCTGCG+CGG | + | chr1.2:24077123-24077142 | MS.gene026174:intron | 35.0% |
| ! | GTACAAGGATACACTGTTTT+AGG | - | chr1.2:24078599-24078618 | None:intergenic | 35.0% |
| ! | TGAAAAGTTTTCGCTTTCGA+AGG | + | chr1.2:24075812-24075831 | MS.gene026174:CDS | 35.0% |
| ! | TGCAGTAGATTTGTTTGAGT+TGG | + | chr1.2:24079164-24079183 | MS.gene026174:intron | 35.0% |
| ! | TTTTCTAACAATGTCCACCA+GGG | - | chr1.2:24078252-24078271 | None:intergenic | 35.0% |
| !! | GATTTTCAGGACTTGAATGT+TGG | + | chr1.2:24075834-24075853 | MS.gene026174:CDS | 35.0% |
| !! | TTTTGAGAGAAAGCGATTGT+AGG | - | chr1.2:24078061-24078080 | None:intergenic | 35.0% |
| !!! | GATGGTTGGTTTTGATTTGT+AGG | - | chr1.2:24075407-24075426 | None:intergenic | 35.0% |
| AAACACTTGTAGCACGCATT+TGG | - | chr1.2:24076389-24076408 | None:intergenic | 40.0% | |
| AAAGACATATTGCGGCAACT+AGG | - | chr1.2:24077548-24077567 | None:intergenic | 40.0% | |
| AAATGCGTGCTACAAGTGTT+TGG | + | chr1.2:24076388-24076407 | MS.gene026174:intron | 40.0% | |
| AAGTCACCTCATTGTGATCA+TGG | - | chr1.2:24078407-24078426 | None:intergenic | 40.0% | |
| ACAAATCAGTTTCGTAGGGT+TGG | - | chr1.2:24078699-24078718 | None:intergenic | 40.0% | |
| AGCAGAGTTGTCATAAAGCT+TGG | - | chr1.2:24076899-24076918 | None:intergenic | 40.0% | |
| AGCTATTGGATTCTCACCTA+TGG | + | chr1.2:24078362-24078381 | MS.gene026174:CDS | 40.0% | |
| AGTACAACTCAGACTCGAAA+AGG | - | chr1.2:24075949-24075968 | None:intergenic | 40.0% | |
| ATAGGTGAGAATCCAATAGC+TGG | - | chr1.2:24078363-24078382 | None:intergenic | 40.0% | |
| ATAGTGCAAGACTCACTTTC+TGG | - | chr1.2:24078523-24078542 | None:intergenic | 40.0% | |
| ATCATCATTCTCAAATGGGC+CGG | + | chr1.2:24075525-24075544 | MS.gene026174:CDS | 40.0% | |
| ATGTTCAATCCTAGTCGTGA+AGG | - | chr1.2:24078802-24078821 | None:intergenic | 40.0% | |
| CAAATCAGTTTCGTAGGGTT+GGG | - | chr1.2:24078698-24078717 | None:intergenic | 40.0% | |
| CACTTACAAACTAACAGGAC+TGG | + | chr1.2:24076783-24076802 | MS.gene026174:intron | 40.0% | |
| CGAATCCCAAACTATCGAAT+TGG | + | chr1.2:24075488-24075507 | MS.gene026174:CDS | 40.0% | |
| CGGATACCAATTCGATAGTT+TGG | - | chr1.2:24075497-24075516 | None:intergenic | 40.0% | |
| CTAACTCTACTCCACAAAAC+CGG | + | chr1.2:24078899-24078918 | MS.gene026174:intron | 40.0% | |
| CTATAAGGAAGATGCTTCGA+CGG | - | chr1.2:24075308-24075327 | None:intergenic | 40.0% | |
| CTCTAATGATTCTGCATCAG+CGG | - | chr1.2:24077501-24077520 | None:intergenic | 40.0% | |
| CTGATGCAGAATCATTAGAG+AGG | + | chr1.2:24077501-24077520 | MS.gene026174:CDS | 40.0% | |
| CTTGATCAAGTCAAACTGTG+AGG | - | chr1.2:24076968-24076987 | None:intergenic | 40.0% | |
| CTTTCCTTCATCATCCACAT+GGG | - | chr1.2:24075643-24075662 | None:intergenic | 40.0% | |
| GCAAATTCATGACAAAACCC+TGG | - | chr1.2:24077433-24077452 | None:intergenic | 40.0% | |
| GCCCATTTGAGAATGATGAT+GGG | - | chr1.2:24075525-24075544 | None:intergenic | 40.0% | |
| GCCTAAGAGGACTGTTTATT+TGG | + | chr1.2:24075749-24075768 | MS.gene026174:CDS | 40.0% | |
| GCTTTATGACAACTCTGCTA+TGG | + | chr1.2:24076900-24076919 | MS.gene026174:CDS | 40.0% | |
| GTTGGTATAGTGCTTGATGA+AGG | + | chr1.2:24075852-24075871 | MS.gene026174:CDS | 40.0% | |
| TCTACTCCATGATCACAATG+AGG | + | chr1.2:24078398-24078417 | MS.gene026174:CDS | 40.0% | |
| TCTTTCCTTCATCATCCACA+TGG | - | chr1.2:24075644-24075663 | None:intergenic | 40.0% | |
| TGCAGTATCTTGAAGCTGTT+AGG | + | chr1.2:24075703-24075722 | MS.gene026174:CDS | 40.0% | |
| TGTTCAATCCTAGTCGTGAA+GGG | - | chr1.2:24078801-24078820 | None:intergenic | 40.0% | |
| TTGATTTCGGTTCCAAACCT+TGG | + | chr1.2:24076497-24076516 | MS.gene026174:intron | 40.0% | |
| TTGCCGCAATATGTCTTTCA+GGG | + | chr1.2:24077550-24077569 | MS.gene026174:CDS | 40.0% | |
| ! | ATGTTCTGGCACAACCTTTT+CGG | - | chr1.2:24079202-24079221 | None:intergenic | 40.0% |
| ! | GGTGATGATGTACCTAACTT+TGG | + | chr1.2:24076708-24076727 | MS.gene026174:intron | 40.0% |
| ! | GTTTGACTTACAGTTGGAGA+TGG | - | chr1.2:24077054-24077073 | None:intergenic | 40.0% |
| ! | TTCGCTTTCGAAGGATTTTC+AGG | + | chr1.2:24075821-24075840 | MS.gene026174:CDS | 40.0% |
| !! | AAAACCGGCTTGTATGGTAA+TGG | + | chr1.2:24078914-24078933 | MS.gene026174:intron | 40.0% |
| !! | AGAATAGGAGTGTTTGCCAT+AGG | - | chr1.2:24078381-24078400 | None:intergenic | 40.0% |
| !! | AGAGTATTGAAAGCATCCGA+AGG | + | chr1.2:24076935-24076954 | MS.gene026174:CDS | 40.0% |
| !! | CACTTTGGAGTTTCTACCAA+TGG | - | chr1.2:24076322-24076341 | None:intergenic | 40.0% |
| !! | CCCTACGAAACTGATTTGTA+AGG | + | chr1.2:24078700-24078719 | MS.gene026174:intron | 40.0% |
| !! | CTCACAGTTTGACTTGATCA+AGG | + | chr1.2:24076966-24076985 | MS.gene026174:CDS | 40.0% |
| !! | TGAACATCTTGAGTTGAGTG+TGG | + | chr1.2:24078815-24078834 | MS.gene026174:intron | 40.0% |
| !!! | GAGAATGATGATGGGTTTTC+CGG | - | chr1.2:24075517-24075536 | None:intergenic | 40.0% |
| !!! | TTTGGTTTTTGCTCCTGATG+AGG | + | chr1.2:24075767-24075786 | MS.gene026174:CDS | 40.0% |
| AAACTGACAGTTCCAATCCC+TGG | + | chr1.2:24078232-24078251 | MS.gene026174:CDS | 45.0% | |
| AAGGTTGTGCCAGAACATTG+TGG | + | chr1.2:24079204-24079223 | MS.gene026174:intron | 45.0% | |
| AATCCAGCTTCTGCTTCAGA+TGG | - | chr1.2:24077458-24077477 | None:intergenic | 45.0% | |
| AATGATTCTGCATCAGCGGT+TGG | - | chr1.2:24077497-24077516 | None:intergenic | 45.0% | |
| ACAACACAGTCTATCCCTGT+TGG | - | chr1.2:24078857-24078876 | None:intergenic | 45.0% | |
| AGTGTGAGAGTAGAGCATGA+TGG | - | chr1.2:24075571-24075590 | None:intergenic | 45.0% | |
| ATCTCTTACACGCTCATCGA+AGG | - | chr1.2:24079422-24079441 | None:intergenic | 45.0% | |
| ATGGGCCTTGAAAGGATCAT+GGG | - | chr1.2:24075625-24075644 | None:intergenic | 45.0% | |
| CAACACAGTCTATCCCTGTT+GGG | - | chr1.2:24078856-24078875 | None:intergenic | 45.0% | |
| CAATAGCTGGCAATCCAACA+CGG | - | chr1.2:24078350-24078369 | None:intergenic | 45.0% | |
| CCAATGGTGTGCTAAACACA+TGG | - | chr1.2:24076306-24076325 | None:intergenic | 45.0% | |
| CCATGTGTTTAGCACACCAT+TGG | + | chr1.2:24076303-24076322 | MS.gene026174:intron | 45.0% | |
| GATTTATGCAAGAGGGTCAC+AGG | + | chr1.2:24075662-24075681 | MS.gene026174:CDS | 45.0% | |
| GCAAGTTCAAATCCACGTCT+TGG | + | chr1.2:24075920-24075939 | MS.gene026174:intron | 45.0% | |
| GCATCCATTACCATACAAGC+CGG | - | chr1.2:24078921-24078940 | None:intergenic | 45.0% | |
| GCTAAACACATGGTAGCACA+CGG | - | chr1.2:24076296-24076315 | None:intergenic | 45.0% | |
| GGCCCATTTGAGAATGATGA+TGG | - | chr1.2:24075526-24075545 | None:intergenic | 45.0% | |
| GGGTTGTATCCTAACCGAAA+AGG | + | chr1.2:24079185-24079204 | MS.gene026174:intron | 45.0% | |
| GTTAGAAAATGCCGTCCAAG+AGG | + | chr1.2:24078263-24078282 | MS.gene026174:CDS | 45.0% | |
| GTTGCCGCAATATGTCTTTC+AGG | + | chr1.2:24077549-24077568 | MS.gene026174:CDS | 45.0% | |
| TAACAATGTCCACCAGGGAT+TGG | - | chr1.2:24078247-24078266 | None:intergenic | 45.0% | |
| TGGAGTTCCAGCCTTCAAAA+AGG | - | chr1.2:24077034-24077053 | None:intergenic | 45.0% | |
| TTCGATGAGCGTGTAAGAGA+TGG | + | chr1.2:24079421-24079440 | MS.gene026174:CDS | 45.0% | |
| TTCTCCGGATGAGCATTACA+GGG | + | chr1.2:24076807-24076826 | MS.gene026174:CDS | 45.0% | |
| TTTGCTCCTGATGAGGAGAT+TGG | + | chr1.2:24075774-24075793 | MS.gene026174:CDS | 45.0% | |
| ! | GGAGTCGTTTGACTTACAGT+TGG | - | chr1.2:24077060-24077079 | None:intergenic | 45.0% |
| ! | GGGATTGGAACTGTCAGTTT+TGG | - | chr1.2:24078232-24078251 | None:intergenic | 45.0% |
| ! | GTTGGGATTTTCAGCCTAAG+AGG | + | chr1.2:24075736-24075755 | MS.gene026174:CDS | 45.0% |
| ! | TGAGAGTAGAGCATGATGGA+AGG | - | chr1.2:24075567-24075586 | None:intergenic | 45.0% |
| ! | TGATTAGCTGCATAGTGCTG+CGG | + | chr1.2:24076349-24076368 | MS.gene026174:intron | 45.0% |
| !! | AACATGGCCTTTTTGAAGGC+TGG | + | chr1.2:24077024-24077043 | MS.gene026174:CDS | 45.0% |
| !! | CAGTTTGACTTGATCAAGGC+CGG | + | chr1.2:24076970-24076989 | MS.gene026174:CDS | 45.0% |
| !! | CTTTCTTTTGCTGTGCACCA+GGG | + | chr1.2:24077413-24077432 | MS.gene026174:intron | 45.0% |
| !! | TACCATACAAGCCGGTTTTG+TGG | - | chr1.2:24078913-24078932 | None:intergenic | 45.0% |
| !! | TCTTTCTTTTGCTGTGCACC+AGG | + | chr1.2:24077412-24077431 | MS.gene026174:intron | 45.0% |
| !! | TTTGGTGATGACTGGTTTCC+CGG | - | chr1.2:24078214-24078233 | None:intergenic | 45.0% |
| !!! | CTGTCAGTTTTGGTGATGAC+TGG | - | chr1.2:24078222-24078241 | None:intergenic | 45.0% |
| !! | AATCTTAAAAAAAAAAAAAT+AGG | - | chr1.2:24077726-24077745 | None:intergenic | 5.0% |
| AACGCCCTGTAATGCTCATC+CGG | - | chr1.2:24076814-24076833 | None:intergenic | 50.0% | |
| AAGGCCCATGTGGATGATGA+AGG | + | chr1.2:24075636-24075655 | MS.gene026174:CDS | 50.0% | |
| AGAGGCGAATTGCTGAAGAG+TGG | + | chr1.2:24077519-24077538 | MS.gene026174:CDS | 50.0% | |
| CATGGGCCTTGAAAGGATCA+TGG | - | chr1.2:24075626-24075645 | None:intergenic | 50.0% | |
| CGGAGGAGTGAGTGTAGTTT+GGG | - | chr1.2:24075434-24075453 | None:intergenic | 50.0% | |
| CGGCGACACACAGAACTAAT+TGG | - | chr1.2:24076141-24076160 | None:intergenic | 50.0% | |
| CGTGTTGGATTGCCAGCTAT+TGG | + | chr1.2:24078348-24078367 | MS.gene026174:CDS | 50.0% | |
| CTTCTCCGGATGAGCATTAC+AGG | + | chr1.2:24076806-24076825 | MS.gene026174:CDS | 50.0% | |
| GAGGCGAATTGCTGAAGAGT+GGG | + | chr1.2:24077520-24077539 | MS.gene026174:CDS | 50.0% | |
| GCTCTACTCTCACACTGATG+TGG | + | chr1.2:24075575-24075594 | MS.gene026174:CDS | 50.0% | |
| GGAGGAGTGAGTGTAGTTTG+GGG | - | chr1.2:24075433-24075452 | None:intergenic | 50.0% | |
| GTGGAAGCAGGAAAGATCTC+CGG | - | chr1.2:24078309-24078328 | None:intergenic | 50.0% | |
| TAAAGCTTGGAGCCATGTCC+AGG | - | chr1.2:24076886-24076905 | None:intergenic | 50.0% | |
| TAGCAACAGATGGCCCAACA+GGG | + | chr1.2:24078840-24078859 | MS.gene026174:intron | 50.0% | |
| TCATCCACATGGGCCTTGAA+AGG | - | chr1.2:24075633-24075652 | None:intergenic | 50.0% | |
| TCGAAAAGGCTACCAAGACG+TGG | - | chr1.2:24075935-24075954 | None:intergenic | 50.0% | |
| TCGGAGGAGTGAGTGTAGTT+TGG | - | chr1.2:24075435-24075454 | None:intergenic | 50.0% | |
| TGACCACCAATCTCCTCATC+AGG | - | chr1.2:24075783-24075802 | None:intergenic | 50.0% | |
| TGATCCTTTCAAGGCCCATG+TGG | + | chr1.2:24075626-24075645 | MS.gene026174:CDS | 50.0% | |
| TGGTGGGAAACTTGGTAAGC+CGG | + | chr1.2:24078287-24078306 | MS.gene026174:CDS | 50.0% | |
| ! | CTGGCACAACCTTTTCGGTT+AGG | - | chr1.2:24079197-24079216 | None:intergenic | 50.0% |
| ! | GAGGAGATTGGTGGTCATGA+TGG | + | chr1.2:24075786-24075805 | MS.gene026174:CDS | 50.0% |
| ! | GAGTGAGTGTAGTTTGGGGT+TGG | - | chr1.2:24075429-24075448 | None:intergenic | 50.0% |
| ! | GAGTGTAGTTTGGGGTTGGA+TGG | - | chr1.2:24075425-24075444 | None:intergenic | 50.0% |
| ! | GTAGTTTGGGGTTGGATGGT+TGG | - | chr1.2:24075421-24075440 | None:intergenic | 50.0% |
| !! | ACTAACAGGACTGGCTTCTC+CGG | + | chr1.2:24076792-24076811 | MS.gene026174:intron | 50.0% |
| !! | CTCCACAAAACCGGCTTGTA+TGG | + | chr1.2:24078908-24078927 | MS.gene026174:intron | 50.0% |
| ACTGTGAGGCGCGAAACCTT+CGG | - | chr1.2:24076954-24076973 | None:intergenic | 55.0% | |
| ATCCCCTTCAGCCTTCAAGC+CGG | - | chr1.2:24076992-24077011 | None:intergenic | 55.0% | |
| CAAGAGGCTGGTGGGAAACT+TGG | + | chr1.2:24078279-24078298 | MS.gene026174:CDS | 55.0% | |
| CAAGTTTCCCACCAGCCTCT+TGG | - | chr1.2:24078281-24078300 | None:intergenic | 55.0% | |
| CACACACACCCTTCACGACT+AGG | + | chr1.2:24078790-24078809 | MS.gene026174:intron | 55.0% | |
| CCCACTTATCGTGTTCAGCG+GGG | - | chr1.2:24075602-24075621 | None:intergenic | 55.0% | |
| CCCCGCTGAACACGATAAGT+GGG | + | chr1.2:24075599-24075618 | MS.gene026174:CDS | 55.0% | |
| CTAGCAACAGATGGCCCAAC+AGG | + | chr1.2:24078839-24078858 | MS.gene026174:intron | 55.0% | |
| CTGACAGTTCCAATCCCTGG+TGG | + | chr1.2:24078235-24078254 | MS.gene026174:CDS | 55.0% | |
| CTGTCAGTGCTTGATGCGTC+CGG | + | chr1.2:24078192-24078211 | MS.gene026174:CDS | 55.0% | |
| CTGTTGGGCCATCTGTTGCT+AGG | - | chr1.2:24078841-24078860 | None:intergenic | 55.0% | |
| GAAAATGCCGTCCAAGAGGC+TGG | + | chr1.2:24078267-24078286 | MS.gene026174:CDS | 55.0% | |
| GAGTGTGGCCTAGCAACAGA+TGG | + | chr1.2:24078830-24078849 | MS.gene026174:intron | 55.0% | |
| GATTCTGCATCAGCGGTTGG+TGG | - | chr1.2:24077494-24077513 | None:intergenic | 55.0% | |
| GCCCACTTATCGTGTTCAGC+GGG | - | chr1.2:24075603-24075622 | None:intergenic | 55.0% | |
| GCGGAAATAGCGTGCATCTG+TGG | - | chr1.2:24078328-24078347 | None:intergenic | 55.0% | |
| GCTCCTGATGAGGAGATTGG+TGG | + | chr1.2:24075777-24075796 | MS.gene026174:CDS | 55.0% | |
| GGCCCACTTATCGTGTTCAG+CGG | - | chr1.2:24075604-24075623 | None:intergenic | 55.0% | |
| GTGGGCCCATGATCCTTTCA+AGG | + | chr1.2:24075617-24075636 | MS.gene026174:CDS | 55.0% | |
| TAGCGTGCATCTGTGGAAGC+AGG | - | chr1.2:24078321-24078340 | None:intergenic | 55.0% | |
| TAGCTGGCAATCCAACACGG+CGG | - | chr1.2:24078347-24078366 | None:intergenic | 55.0% | |
| TCCCCGCTGAACACGATAAG+TGG | + | chr1.2:24075598-24075617 | MS.gene026174:CDS | 55.0% | |
| TGTCAGTGCTTGATGCGTCC+GGG | + | chr1.2:24078193-24078212 | MS.gene026174:CDS | 55.0% | |
| TTTCCCACCAGCCTCTTGGA+CGG | - | chr1.2:24078277-24078296 | None:intergenic | 55.0% | |
| ! | ACAGGGCGTTCTATGCAGAG+AGG | + | chr1.2:24076824-24076843 | MS.gene026174:CDS | 55.0% |
| ! | AGCATGATGGAAGGCAGCTC+CGG | - | chr1.2:24075558-24075577 | None:intergenic | 55.0% |
| ! | CAGCCATCTGAAGCAGAAGC+TGG | + | chr1.2:24077452-24077471 | MS.gene026174:CDS | 55.0% |
| !! | CTTGATCAAGGCCGGCTTGA+AGG | + | chr1.2:24076978-24076997 | MS.gene026174:CDS | 55.0% |
| AATGCCGTCCAAGAGGCTGG+TGG | + | chr1.2:24078270-24078289 | MS.gene026174:CDS | 60.0% | |
| ATGCCGTCCAAGAGGCTGGT+GGG | + | chr1.2:24078271-24078290 | MS.gene026174:CDS | 60.0% | |
| CAAATGGGCCGGTACAAGCC+CGG | + | chr1.2:24075536-24075555 | MS.gene026174:CDS | 60.0% | |
| CCTTGATCACCAGCCACCAC+GGG | - | chr1.2:24076852-24076871 | None:intergenic | 60.0% | |
| GCCTTGATCACCAGCCACCA+CGG | - | chr1.2:24076853-24076872 | None:intergenic | 60.0% | |
| GCTGGTGATCAAGGCCGTTG+GGG | + | chr1.2:24076858-24076877 | MS.gene026174:CDS | 60.0% | |
| GGCTGGTGATCAAGGCCGTT+GGG | + | chr1.2:24076857-24076876 | MS.gene026174:CDS | 60.0% | |
| TCTATGCAGAGAGGAGCCCG+TGG | + | chr1.2:24076833-24076852 | MS.gene026174:CDS | 60.0% | |
| TGGCTGGTGATCAAGGCCGT+TGG | + | chr1.2:24076856-24076875 | MS.gene026174:CDS | 60.0% | |
| ! | GCACGCTATTTCCGCCGTGT+TGG | + | chr1.2:24078333-24078352 | MS.gene026174:CDS | 60.0% |
| ! | GCATGATGGAAGGCAGCTCC+GGG | - | chr1.2:24075557-24075576 | None:intergenic | 60.0% |
| !! | AAGGCCGGCTTGAAGGCTGA+AGG | + | chr1.2:24076985-24077004 | MS.gene026174:CDS | 60.0% |
| !! | AGGCCGGCTTGAAGGCTGAA+GGG | + | chr1.2:24076986-24077005 | MS.gene026174:CDS | 60.0% |
| AGGCAGCTCCGGGCTTGTAC+CGG | - | chr1.2:24075547-24075566 | None:intergenic | 65.0% | |
| ATCAAGGCCGTTGGGGCTCC+TGG | + | chr1.2:24076865-24076884 | MS.gene026174:CDS | 65.0% | |
| ATGCAGAGAGGAGCCCGTGG+TGG | + | chr1.2:24076836-24076855 | MS.gene026174:CDS | 65.0% | |
| CCCGTGGTGGCTGGTGATCA+AGG | + | chr1.2:24076849-24076868 | MS.gene026174:CDS | 65.0% | |
| GCCATGTCCAGGAGCCCCAA+CGG | - | chr1.2:24076875-24076894 | None:intergenic | 65.0% | |
| !! | GGCCGGCTTGAAGGCTGAAG+GGG | + | chr1.2:24076987-24077006 | MS.gene026174:CDS | 65.0% |
| AGAGAGGAGCCCGTGGTGGC+TGG | + | chr1.2:24076840-24076859 | MS.gene026174:CDS | 70.0% | |
| GCCGTTGGGGCTCCTGGACA+TGG | + | chr1.2:24076871-24076890 | MS.gene026174:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 24075294 | 24079465 | 24075294 | ID=MS.gene026174 |
| chr1.2 | mRNA | 24075294 | 24079465 | 24075294 | ID=MS.gene026174.t1;Parent=MS.gene026174 |
| chr1.2 | exon | 24075294 | 24075873 | 24075294 | ID=MS.gene026174.t1.exon1;Parent=MS.gene026174.t1 |
| chr1.2 | CDS | 24075294 | 24075873 | 24075294 | ID=cds.MS.gene026174.t1;Parent=MS.gene026174.t1 |
| chr1.2 | exon | 24076800 | 24077062 | 24076800 | ID=MS.gene026174.t1.exon2;Parent=MS.gene026174.t1 |
| chr1.2 | CDS | 24076800 | 24077062 | 24076800 | ID=cds.MS.gene026174.t1;Parent=MS.gene026174.t1 |
| chr1.2 | exon | 24077434 | 24077571 | 24077434 | ID=MS.gene026174.t1.exon3;Parent=MS.gene026174.t1 |
| chr1.2 | CDS | 24077434 | 24077571 | 24077434 | ID=cds.MS.gene026174.t1;Parent=MS.gene026174.t1 |
| chr1.2 | exon | 24078171 | 24078419 | 24078171 | ID=MS.gene026174.t1.exon4;Parent=MS.gene026174.t1 |
| chr1.2 | CDS | 24078171 | 24078419 | 24078171 | ID=cds.MS.gene026174.t1;Parent=MS.gene026174.t1 |
| chr1.2 | exon | 24079352 | 24079465 | 24079352 | ID=MS.gene026174.t1.exon5;Parent=MS.gene026174.t1 |
| chr1.2 | CDS | 24079352 | 24079465 | 24079352 | ID=cds.MS.gene026174.t1;Parent=MS.gene026174.t1 |
| Gene Sequence |
| Protein sequence |
