Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99939.t1 | RHN55952.1 | 90 | 440 | 42 | 1 | 5 | 444 | 3 | 440 | 1.90E-228 | 801.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99939.t1 | Q99JW2 | 42.3 | 402 | 217 | 5 | 38 | 438 | 13 | 400 | 3.1e-91 | 337.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99939.t1 | A0A396HRI7 | 90.0 | 440 | 42 | 1 | 5 | 444 | 3 | 440 | 1.3e-228 | 801.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99939 | MS.gene026174 | PPI |
| MS.gene99939 | MS.gene91122 | PPI |
| MS.gene99939 | MS.gene88610 | PPI |
| MS.gene99939 | MS.gene29220 | PPI |
| MS.gene99939 | MS.gene91126 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99939.t1 | MTR_5g058430 | 95.170 | 352 | 17 | 0 | 93 | 444 | 4 | 355 | 0.0 | 681 |
| MS.gene99939.t1 | MTR_1g039010 | 54.034 | 409 | 187 | 1 | 33 | 441 | 28 | 435 | 2.21e-166 | 476 |
| MS.gene99939.t1 | MTR_1g038920 | 54.208 | 404 | 184 | 1 | 38 | 441 | 36 | 438 | 2.01e-163 | 468 |
| MS.gene99939.t1 | MTR_1g038920 | 53.808 | 407 | 184 | 2 | 38 | 441 | 36 | 441 | 1.61e-161 | 463 |
| MS.gene99939.t1 | MTR_0400s0010 | 55.932 | 177 | 75 | 1 | 242 | 415 | 1 | 177 | 2.93e-70 | 220 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99939.t1 | AT1G44820 | 67.523 | 428 | 135 | 2 | 12 | 439 | 7 | 430 | 0.0 | 620 |
| MS.gene99939.t1 | AT1G44180 | 66.129 | 434 | 142 | 2 | 13 | 442 | 3 | 435 | 0.0 | 612 |
| MS.gene99939.t1 | AT1G44180 | 66.129 | 434 | 142 | 2 | 13 | 442 | 3 | 435 | 0.0 | 612 |
| MS.gene99939.t1 | AT1G44180 | 66.129 | 434 | 142 | 2 | 13 | 442 | 3 | 435 | 0.0 | 612 |
| MS.gene99939.t1 | AT4G38220 | 53.415 | 410 | 185 | 2 | 34 | 443 | 21 | 424 | 4.14e-164 | 469 |
| MS.gene99939.t1 | AT4G38220 | 53.528 | 411 | 186 | 3 | 34 | 443 | 21 | 427 | 7.50e-164 | 469 |
Find 139 sgRNAs with CRISPR-Local
Find 491 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGGTTGGTGATGAGTTT+AGG | 0.214559 | 5.3:+46462618 | MS.gene99939:CDS |
| AGGACCCATCAGAGACTATT+TGG | 0.216846 | 5.3:+46467486 | MS.gene99939:CDS |
| GTTGTGGATGCAAGAATTTC+AGG | 0.269753 | 5.3:-46467601 | None:intergenic |
| CTTCTTCTCTTTACATGGCC+TGG | 0.278538 | 5.3:+46462263 | MS.gene99939:CDS |
| TCATTAGTTGCAGTCATTAA+AGG | 0.282446 | 5.3:-46467514 | None:intergenic |
| TTCGGTTGGTGATGAGTTTA+GGG | 0.303395 | 5.3:+46462619 | MS.gene99939:CDS |
| GCGGAGGTGTAATCTGGATT+TGG | 0.322659 | 5.3:-46462161 | None:intergenic |
| GGATGGAAGGGAGAGAAGGG+TGG | 0.335116 | 5.3:-46462289 | None:intergenic |
| GATGAGGAAGTTGGTGGATT+TGG | 0.346416 | 5.3:+46462521 | MS.gene99939:CDS |
| TTCTTCTCTTTACATGGCCT+GGG | 0.353200 | 5.3:+46462264 | MS.gene99939:CDS |
| ACTCCAGCCTTAACATAAAC+TGG | 0.359930 | 5.3:-46462839 | None:intergenic |
| CAGAAAGGCATTCCTGTACT+TGG | 0.364782 | 5.3:+46467643 | MS.gene99939:CDS |
| GTTGAATTCCGAGGTTGTTT+CGG | 0.366528 | 5.3:+46462811 | MS.gene99939:CDS |
| GAAATAGCGGAGGTGTAATC+TGG | 0.382097 | 5.3:-46462167 | None:intergenic |
| AGCCTCTTCTTCTCTTTACA+TGG | 0.382195 | 5.3:+46462258 | MS.gene99939:CDS |
| GGAAGGGATGGAGTTGGATT+GGG | 0.382893 | 5.3:-46462201 | None:intergenic |
| CAGTTTGATGTTGTTAAGGC+TGG | 0.384823 | 5.3:+46462782 | MS.gene99939:CDS |
| TCCCTGCTGAACCTTCTAAA+TGG | 0.394541 | 5.3:+46462336 | MS.gene99939:CDS |
| GGACCCATCAGAGACTATTT+GGG | 0.396497 | 5.3:+46467487 | MS.gene99939:CDS |
| ATTCTCCTCTTCATTTCGTC+AGG | 0.396666 | 5.3:-46463253 | None:intergenic |
| CGGAGGTGTAATCTGGATTT+GGG | 0.414688 | 5.3:-46462160 | None:intergenic |
| GAGTCAGTTTGATGTTGTTA+AGG | 0.415690 | 5.3:+46462778 | MS.gene99939:CDS |
| AGGAGGATGGAAGGGAGAGA+AGG | 0.418965 | 5.3:-46462293 | None:intergenic |
| TGGGAATTGAGGAGGATGGA+AGG | 0.419559 | 5.3:-46462302 | None:intergenic |
| GGAGGATGGAAGGGAGAGAA+GGG | 0.423705 | 5.3:-46462292 | None:intergenic |
| AATCCACCAACTTCCTCATC+AGG | 0.423834 | 5.3:-46462518 | None:intergenic |
| GGAGGATGGAGCCATTTAGA+AGG | 0.426494 | 5.3:-46462347 | None:intergenic |
| GATTAAAGCGAAAGGGCAAC+CGG | 0.433872 | 5.3:+46462676 | MS.gene99939:CDS |
| GCTTCCCTGGTGAGAATTCA+AGG | 0.436460 | 5.3:-46462238 | None:intergenic |
| TGCAATACCTCGAAGCAATT+CGG | 0.438262 | 5.3:+46462441 | MS.gene99939:CDS |
| GAGAAATGAACCGTCCGAAC+CGG | 0.440664 | 5.3:-46462488 | None:intergenic |
| GGTTAATCCAGTTTATGTTA+AGG | 0.441495 | 5.3:+46462832 | MS.gene99939:CDS |
| AAGTTGGTGGATTTGGTGGT+TGG | 0.442213 | 5.3:+46462528 | MS.gene99939:CDS |
| GAGGAAGTTGGTGGATTTGG+TGG | 0.443100 | 5.3:+46462524 | MS.gene99939:CDS |
| CGCATCGCGAACGGCGGAGA+AGG | 0.447065 | 5.3:-46462369 | None:intergenic |
| TGGAAGGGATGGAGTTGGAT+TGG | 0.447611 | 5.3:-46462202 | None:intergenic |
| GGGAGAGAAGGGTGGGACCC+AGG | 0.448707 | 5.3:-46462281 | None:intergenic |
| CAACCTTCGGAGGCAGAAGC+TGG | 0.469578 | 5.3:+46463199 | MS.gene99939:CDS |
| GAATTTGAAAAGATGAATGT+TGG | 0.470089 | 5.3:+46462572 | MS.gene99939:CDS |
| GTTGGATTGGGAGGTGAGGT+AGG | 0.470149 | 5.3:-46462189 | None:intergenic |
| GTTGGATTTGCGTTAGATGA+AGG | 0.472044 | 5.3:+46462590 | MS.gene99939:CDS |
| GGGAATTGAGGAGGATGGAA+GGG | 0.475673 | 5.3:-46462301 | None:intergenic |
| AATCCAGTTTATGTTAAGGC+TGG | 0.478162 | 5.3:+46462836 | MS.gene99939:CDS |
| GTGCACCACGGGCGAAGATA+AGG | 0.479507 | 5.3:-46462397 | None:intergenic |
| CGTGTACATGAAGGGAATAA+AGG | 0.481265 | 5.3:+46467835 | MS.gene99939:CDS |
| TACAATCTCGAGCCATGCCC+CGG | 0.483019 | 5.3:-46462695 | None:intergenic |
| GCTTTAATCTTCAAATGCCA+TGG | 0.489025 | 5.3:-46462662 | None:intergenic |
| TATCTTCGCCCGTGGTGCAC+AGG | 0.489257 | 5.3:+46462400 | MS.gene99939:CDS |
| TAGCGTTGGAAACGACTGAT+TGG | 0.490663 | 5.3:-46462116 | None:intergenic |
| TGTGATGAATGTGCAACCTT+CGG | 0.491674 | 5.3:+46463186 | MS.gene99939:CDS |
| CAACTTCCTCATCAGGGACT+AGG | 0.493818 | 5.3:-46462511 | None:intergenic |
| AGCCATTTAGAAGGTTCAGC+AGG | 0.495114 | 5.3:-46462338 | None:intergenic |
| CTAGTCCCTGATGAGGAAGT+TGG | 0.495205 | 5.3:+46462512 | MS.gene99939:CDS |
| TGGTGGTTGGCAGTTGTTTG+CGG | 0.495968 | 5.3:+46462541 | MS.gene99939:CDS |
| AATATATCGAGCATCGGTTG+TGG | 0.496361 | 5.3:-46467617 | None:intergenic |
| TTTATCATCCTGTGCACCAC+GGG | 0.498318 | 5.3:-46462408 | None:intergenic |
| ATGGATGGAAGGGATGGAGT+TGG | 0.501034 | 5.3:-46462207 | None:intergenic |
| GAAAACTAACCACCATGGAT+TGG | 0.501858 | 5.3:-46467539 | None:intergenic |
| GAGGAGAATTGCTGCTGAAT+GGG | 0.503044 | 5.3:+46463267 | MS.gene99939:CDS |
| GTTAGATGAAGGTCAAGCTT+CGG | 0.503578 | 5.3:+46462601 | MS.gene99939:CDS |
| AAGAGAAGAAGAGGCTTCCC+TGG | 0.506172 | 5.3:-46462251 | None:intergenic |
| AAAATCCTTGAATTCTCACC+AGG | 0.511241 | 5.3:+46462233 | MS.gene99939:CDS |
| TGTTAGAAATATGTCATATG+AGG | 0.518886 | 5.3:+46463297 | MS.gene99939:CDS |
| GGAGGTGAGGTAGGAAATAG+CGG | 0.521837 | 5.3:-46462180 | None:intergenic |
| CAGAGTCGAGATGGGAATTG+AGG | 0.521882 | 5.3:-46462313 | None:intergenic |
| AGAGGAGAATTGCTGCTGAA+TGG | 0.522314 | 5.3:+46463266 | MS.gene99939:CDS |
| TAAGATTCCGAATTGCTTCG+AGG | 0.522352 | 5.3:-46462448 | None:intergenic |
| TGTTTATGCGAAGGTAGCGT+TGG | 0.524429 | 5.3:-46462130 | None:intergenic |
| TTTGTGATGGATGGAAGGGA+TGG | 0.525198 | 5.3:-46462213 | None:intergenic |
| CAGCAGGGACAGAGTCGAGA+TGG | 0.527948 | 5.3:-46462322 | None:intergenic |
| AAGCAGGCTATAGCCTCAGC+TGG | 0.528719 | 5.3:+46467562 | MS.gene99939:CDS |
| GAACGGCGGAGAAGGGAGGA+TGG | 0.535117 | 5.3:-46462361 | None:intergenic |
| AACTTCCTCATCAGGGACTA+GGG | 0.535919 | 5.3:-46462510 | None:intergenic |
| GCGAAAGGGCAACCGGGGCA+TGG | 0.540661 | 5.3:+46462683 | MS.gene99939:CDS |
| TTTATGCGGATCGGTTTCCA+TGG | 0.541080 | 5.3:+46462645 | MS.gene99939:CDS |
| TGATGTTGTTAAGGCTGGGA+AGG | 0.542641 | 5.3:+46462787 | MS.gene99939:CDS |
| TTGTGGTCATGAAGCAAGAT+GGG | 0.543860 | 5.3:-46467688 | None:intergenic |
| ATTTGAAGATTAAAGCGAAA+GGG | 0.543919 | 5.3:+46462669 | MS.gene99939:CDS |
| ACGCCCCAAATAGTCTCTGA+TGG | 0.548595 | 5.3:-46467491 | None:intergenic |
| ATTGTGGTCATGAAGCAAGA+TGG | 0.549393 | 5.3:-46467689 | None:intergenic |
| GCTCGATATATTCGACAGAA+AGG | 0.549981 | 5.3:+46467628 | MS.gene99939:CDS |
| GGCCATGTAAAGAGAAGAAG+AGG | 0.550353 | 5.3:-46462260 | None:intergenic |
| GTCCCTGATGAGGAAGTTGG+TGG | 0.550813 | 5.3:+46462515 | MS.gene99939:CDS |
| CTTTATTCCCTTCATGTACA+CGG | 0.550826 | 5.3:-46467834 | None:intergenic |
| GCAGTTGTTTGCGGAGTCTG+AGG | 0.553907 | 5.3:+46462550 | MS.gene99939:CDS |
| ATTAAAGCGAAAGGGCAACC+GGG | 0.555182 | 5.3:+46462677 | MS.gene99939:CDS |
| ACGAGATACCGTGTACATGA+AGG | 0.555528 | 5.3:+46467826 | MS.gene99939:CDS |
| GATGGAAGGGAGAGAAGGGT+GGG | 0.559746 | 5.3:-46462288 | None:intergenic |
| GAGATGGGAATTGAGGAGGA+TGG | 0.562397 | 5.3:-46462306 | None:intergenic |
| ATTGGGGAGAAACCAAGTAC+AGG | 0.562420 | 5.3:-46467655 | None:intergenic |
| TCCGCCGTTCGCGATGCGGA+CGG | 0.563059 | 5.3:+46462374 | MS.gene99939:CDS |
| TCGCGAACGGCGGAGAAGGG+AGG | 0.571420 | 5.3:-46462365 | None:intergenic |
| AAACCAGCTTCTGCCTCCGA+AGG | 0.573740 | 5.3:-46463202 | None:intergenic |
| GCATCGCGAACGGCGGAGAA+GGG | 0.576727 | 5.3:-46462368 | None:intergenic |
| AAGGCCGTCCGCATCGCGAA+CGG | 0.578752 | 5.3:-46462378 | None:intergenic |
| TGGAGTTGGATTGGGAGGTG+AGG | 0.579366 | 5.3:-46462193 | None:intergenic |
| CGCCCCAAATAGTCTCTGAT+GGG | 0.582098 | 5.3:-46467490 | None:intergenic |
| CAACTAATGATTCCAATCCA+TGG | 0.582221 | 5.3:+46467527 | MS.gene99939:CDS |
| GATGAAGGTCAAGCTTCGGT+TGG | 0.584251 | 5.3:+46462605 | MS.gene99939:CDS |
| AGTTTGATGTTGTTAAGGCT+GGG | 0.586632 | 5.3:+46462783 | MS.gene99939:CDS |
| CTTCTCCGCCGTTCGCGATG+CGG | 0.589040 | 5.3:+46462370 | MS.gene99939:CDS |
| AGCAGGGACAGAGTCGAGAT+GGG | 0.589360 | 5.3:-46462321 | None:intergenic |
| CTGTCGAATATATCGAGCAT+CGG | 0.589926 | 5.3:-46467623 | None:intergenic |
| ATTTCGTCAGGATCTGTCGT+AGG | 0.590363 | 5.3:-46463241 | None:intergenic |
| CAGATCCTGACGAAATGAAG+AGG | 0.592088 | 5.3:+46463248 | MS.gene99939:CDS |
| CGAGATACCGTGTACATGAA+GGG | 0.594401 | 5.3:+46467827 | MS.gene99939:CDS |
| ATTGTATGATGATAGTGCTA+TGG | 0.595056 | 5.3:+46462712 | MS.gene99939:CDS |
| ATATTGCAGATCATAGAGAA+AGG | 0.596427 | 5.3:+46467466 | MS.gene99939:intron |
| ATTCGGAATCTTAACAACAA+GGG | 0.596614 | 5.3:+46462458 | MS.gene99939:CDS |
| TGCCAAACTCACATCATGAG+TGG | 0.600194 | 5.3:-46462864 | None:intergenic |
| GAATTTGATGAAGAGTGTTG+AGG | 0.601037 | 5.3:+46462736 | MS.gene99939:CDS |
| AGCTTCAGTAAACGAACTCA+AGG | 0.603836 | 5.3:-46467879 | None:intergenic |
| AGAGTGTTGAGGTTGTGAGT+AGG | 0.605145 | 5.3:+46462747 | MS.gene99939:CDS |
| TGGATTAACCGAAACAACCT+CGG | 0.607325 | 5.3:-46462819 | None:intergenic |
| AATTCGGAATCTTAACAACA+AGG | 0.615006 | 5.3:+46462457 | MS.gene99939:CDS |
| GCCGTCCGCATCGCGAACGG+CGG | 0.615094 | 5.3:-46462375 | None:intergenic |
| TATGACATATTTCTAACAGA+GGG | 0.617026 | 5.3:-46463292 | None:intergenic |
| GACGGCCTTATCTTCGCCCG+TGG | 0.618435 | 5.3:+46462392 | MS.gene99939:CDS |
| GCCAAACTCACATCATGAGT+GGG | 0.619380 | 5.3:-46462863 | None:intergenic |
| CATTTGAAGATTAAAGCGAA+AGG | 0.620511 | 5.3:+46462668 | MS.gene99939:CDS |
| CTTGCTTCATGACCACAATG+AGG | 0.623020 | 5.3:+46467693 | MS.gene99939:CDS |
| GCCATTTAGAAGGTTCAGCA+GGG | 0.636542 | 5.3:-46462337 | None:intergenic |
| ATCCACCAACTTCCTCATCA+GGG | 0.637173 | 5.3:-46462517 | None:intergenic |
| AGTCGAGATGGGAATTGAGG+AGG | 0.638489 | 5.3:-46462310 | None:intergenic |
| TGGGAAGGCGTTGAATTCCG+AGG | 0.643000 | 5.3:+46462802 | MS.gene99939:CDS |
| TTTCTCCCTAGTCCCTGATG+AGG | 0.648621 | 5.3:+46462505 | MS.gene99939:CDS |
| TTAAAGCGAAAGGGCAACCG+GGG | 0.660611 | 5.3:+46462678 | MS.gene99939:CDS |
| ATTTATCATCCTGTGCACCA+CGG | 0.661983 | 5.3:-46462409 | None:intergenic |
| AAAGTTGTTTAACCTCATTG+TGG | 0.662961 | 5.3:-46467705 | None:intergenic |
| TGCTTGAAAACTAACCACCA+TGG | 0.670201 | 5.3:-46467544 | None:intergenic |
| AGGGATGGAGTTGGATTGGG+AGG | 0.670881 | 5.3:-46462198 | None:intergenic |
| ATATGACATATTTCTAACAG+AGG | 0.671509 | 5.3:-46463293 | None:intergenic |
| GATGAATGTGCAACCTTCGG+AGG | 0.672443 | 5.3:+46463189 | MS.gene99939:CDS |
| GGTGAGGTAGGAAATAGCGG+AGG | 0.683458 | 5.3:-46462177 | None:intergenic |
| GACCCATCAGAGACTATTTG+GGG | 0.690098 | 5.3:+46467488 | MS.gene99939:CDS |
| GGTGTGCGGTGTTTATGCGA+AGG | 0.690804 | 5.3:-46462139 | None:intergenic |
| AAATCCTTGAATTCTCACCA+GGG | 0.697803 | 5.3:+46462234 | MS.gene99939:CDS |
| GTAATCTGGATTTGGGTGTG+CGG | 0.704552 | 5.3:-46462153 | None:intergenic |
| CTAATGATTCCAATCCATGG+TGG | 0.746783 | 5.3:+46467530 | MS.gene99939:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAAATTATTACTACT+TGG | - | chr5.3:46466344-46466363 | None:intergenic | 10.0% |
| !! | AAATAGTCATAATATAATGA+TGG | + | chr5.3:46466362-46466381 | MS.gene99939:intron | 15.0% |
| !! | AAATGATTTGAATACATAAA+AGG | - | chr5.3:46464137-46464156 | None:intergenic | 15.0% |
| !! | AATAGTCATAATATAATGAT+GGG | + | chr5.3:46466363-46466382 | MS.gene99939:intron | 15.0% |
| !! | AATGATTTGAATACATAAAA+GGG | - | chr5.3:46464136-46464155 | None:intergenic | 15.0% |
| !! | ACATAAAATAACTAAGAATT+GGG | - | chr5.3:46467731-46467750 | None:intergenic | 15.0% |
| !! | ATGTTAATTGAAAAAGAAAA+AGG | - | chr5.3:46467308-46467327 | None:intergenic | 15.0% |
| !! | GCTGAAATTATAAAAAAAAA+TGG | - | chr5.3:46466283-46466302 | None:intergenic | 15.0% |
| !! | TACATAAAATAACTAAGAAT+TGG | - | chr5.3:46467732-46467751 | None:intergenic | 15.0% |
| !!! | AAAACTTTGTTATTCTATTA+TGG | + | chr5.3:46466561-46466580 | MS.gene99939:intron | 15.0% |
| !!! | AAGAAACAATTAACATTTTT+TGG | + | chr5.3:46465499-46465518 | MS.gene99939:intron | 15.0% |
| !!! | ATTTTTTATTAGAAAGTGAA+AGG | + | chr5.3:46464501-46464520 | MS.gene99939:intron | 15.0% |
| !!! | TTTTTTATTAGAAAGTGAAA+GGG | + | chr5.3:46464502-46464521 | MS.gene99939:intron | 15.0% |
| !! | CAGATATTAACATAATAAAG+TGG | - | chr5.3:46462960-46462979 | None:intergenic | 20.0% |
| !! | CGTACTATAAAAATAACAAA+TGG | - | chr5.3:46463048-46463067 | None:intergenic | 20.0% |
| !! | TAAATCAAACATGGTATAAA+TGG | + | chr5.3:46464649-46464668 | MS.gene99939:intron | 20.0% |
| !! | TATCTATAAACTAAATTCAG+TGG | - | chr5.3:46465103-46465122 | None:intergenic | 20.0% |
| !! | TATCTGCATATATATCTATA+CGG | + | chr5.3:46462974-46462993 | MS.gene99939:intron | 20.0% |
| !! | TCTTACGAATAATTATAGAA+AGG | + | chr5.3:46464223-46464242 | MS.gene99939:intron | 20.0% |
| !! | TTAATTAATGAAGTTCCTAT+AGG | + | chr5.3:46463381-46463400 | MS.gene99939:intron | 20.0% |
| !! | TTAGTAAATAATAGAAGAGA+CGG | + | chr5.3:46463513-46463532 | MS.gene99939:intron | 20.0% |
| !!! | AAGTTAGTTAAGATTTTAGT+TGG | + | chr5.3:46467024-46467043 | MS.gene99939:intron | 20.0% |
| !!! | AATTGAATCCATTTGTTAAT+TGG | + | chr5.3:46463109-46463128 | MS.gene99939:intron | 20.0% |
| !!! | AATTTTTACATTTCGTTTTG+TGG | + | chr5.3:46465357-46465376 | MS.gene99939:intron | 20.0% |
| !!! | ACAATTAACATTTTTTGGAA+AGG | + | chr5.3:46465504-46465523 | MS.gene99939:intron | 20.0% |
| !!! | ATTGAATCCATTTGTTAATT+GGG | + | chr5.3:46463110-46463129 | MS.gene99939:intron | 20.0% |
| !!! | ATTTTTACATTTCGTTTTGT+GGG | + | chr5.3:46465358-46465377 | MS.gene99939:intron | 20.0% |
| !!! | CAACAATTTTACTATATCTT+CGG | + | chr5.3:46464726-46464745 | MS.gene99939:intron | 20.0% |
| !!! | GCAAAGATAAGATTATTTTT+GGG | - | chr5.3:46465166-46465185 | None:intergenic | 20.0% |
| !!! | GTAGTTTTTTAAATCAAACA+TGG | + | chr5.3:46464640-46464659 | MS.gene99939:intron | 20.0% |
| !!! | TAAGTTTTTGTATTCTGTAA+GGG | + | chr5.3:46465307-46465326 | MS.gene99939:intron | 20.0% |
| !!! | TATTGAATGGTTGTTTTTAT+GGG | + | chr5.3:46464261-46464280 | MS.gene99939:intron | 20.0% |
| !!! | TCATACTGATTAAAGATATA+TGG | - | chr5.3:46467099-46467118 | None:intergenic | 20.0% |
| !!! | TGCAAAGATAAGATTATTTT+TGG | - | chr5.3:46465167-46465186 | None:intergenic | 20.0% |
| !!! | TTATTGAATGGTTGTTTTTA+TGG | + | chr5.3:46464260-46464279 | MS.gene99939:intron | 20.0% |
| !!! | TTTTTATAGTACGATTTGAT+TGG | + | chr5.3:46463055-46463074 | MS.gene99939:intron | 20.0% |
| ! | AAATCTCATTTGTCTTTATG+TGG | - | chr5.3:46464794-46464813 | None:intergenic | 25.0% |
| ! | AACTTACATAAAGTGAGATA+AGG | - | chr5.3:46464895-46464914 | None:intergenic | 25.0% |
| ! | AAGACAAATGAGATTTGTAT+AGG | + | chr5.3:46464798-46464817 | MS.gene99939:intron | 25.0% |
| ! | AATCTCATTTGTCTTTATGT+GGG | - | chr5.3:46464793-46464812 | None:intergenic | 25.0% |
| ! | AATTACAAGAACAAAAGAGT+TGG | - | chr5.3:46463637-46463656 | None:intergenic | 25.0% |
| ! | AATTGGAGATAAGAAAATGA+AGG | - | chr5.3:46464372-46464391 | None:intergenic | 25.0% |
| ! | ACTTACATAAAGTGAGATAA+GGG | - | chr5.3:46464894-46464913 | None:intergenic | 25.0% |
| ! | ATAAGAAAATGAAGGTTTAC+AGG | - | chr5.3:46464364-46464383 | None:intergenic | 25.0% |
| ! | ATAGTACGAAGTAAAAGAAT+AGG | - | chr5.3:46467381-46467400 | None:intergenic | 25.0% |
| ! | ATATTTGTTTGATTGAACGA+AGG | - | chr5.3:46463706-46463725 | None:intergenic | 25.0% |
| ! | ATCACACTGTAAAATATAAG+CGG | - | chr5.3:46462904-46462923 | None:intergenic | 25.0% |
| ! | ATTTGAAGATTAAAGCGAAA+GGG | + | chr5.3:46462669-46462688 | MS.gene99939:CDS | 25.0% |
| ! | CACAGGTGTATAATAATAAA+TGG | - | chr5.3:46463608-46463627 | None:intergenic | 25.0% |
| ! | CGAATAATTATAGAAAGGAA+AGG | + | chr5.3:46464228-46464247 | MS.gene99939:intron | 25.0% |
| ! | GAATTTGAAAAGATGAATGT+TGG | + | chr5.3:46462572-46462591 | MS.gene99939:CDS | 25.0% |
| ! | GCACTGAAATTTATAATCAT+TGG | + | chr5.3:46465056-46465075 | MS.gene99939:intron | 25.0% |
| ! | GTATGTGTTAAATCACTATA+AGG | + | chr5.3:46463080-46463099 | MS.gene99939:intron | 25.0% |
| ! | TAGTAAATAATAGAAGAGAC+GGG | + | chr5.3:46463514-46463533 | MS.gene99939:intron | 25.0% |
| ! | TGTTAGAAATATGTCATATG+AGG | + | chr5.3:46463297-46463316 | MS.gene99939:CDS | 25.0% |
| ! | TTAGTTTATAGATATTCCAC+TGG | + | chr5.3:46465109-46465128 | MS.gene99939:intron | 25.0% |
| ! | TTATAAATTTCAGTGCACTA+TGG | - | chr5.3:46465052-46465071 | None:intergenic | 25.0% |
| ! | TTATCTCACTTTATGTAAGT+TGG | + | chr5.3:46464894-46464913 | MS.gene99939:intron | 25.0% |
| ! | TTATGTGGGAAAATTTGATT+TGG | - | chr5.3:46464779-46464798 | None:intergenic | 25.0% |
| ! | TTGATTTAAAAAACTACTCC+AGG | - | chr5.3:46464637-46464656 | None:intergenic | 25.0% |
| ! | TTTATGTTTGATGTTGTTGA+TGG | + | chr5.3:46463147-46463166 | MS.gene99939:intron | 25.0% |
| ! | TTTGTCAAGAAATTAATGAC+AGG | - | chr5.3:46467442-46467461 | None:intergenic | 25.0% |
| !! | AAGTTTTTGTATTCTGTAAG+GGG | + | chr5.3:46465308-46465327 | MS.gene99939:intron | 25.0% |
| !! | AGTAAAATTGTTGTTCACTA+AGG | - | chr5.3:46464719-46464738 | None:intergenic | 25.0% |
| !! | ATATGACATATTTCTAACAG+AGG | - | chr5.3:46463296-46463315 | None:intergenic | 25.0% |
| !! | CTATAAATTTTGCTCAAAAC+AGG | + | chr5.3:46464045-46464064 | MS.gene99939:intron | 25.0% |
| !! | GAAAAGTCTGATTTTTCTTT+TGG | + | chr5.3:46463332-46463351 | MS.gene99939:intron | 25.0% |
| !! | GTAAGTTTTTGTATTCTGTA+AGG | + | chr5.3:46465306-46465325 | MS.gene99939:intron | 25.0% |
| !! | TATGACATATTTCTAACAGA+GGG | - | chr5.3:46463295-46463314 | None:intergenic | 25.0% |
| !!! | CTTTATGTAAGTTGGTTATA+AGG | + | chr5.3:46464949-46464968 | MS.gene99939:intron | 25.0% |
| !!! | TCATAATATAATGATGGGTA+CGG | + | chr5.3:46466368-46466387 | MS.gene99939:intron | 25.0% |
| !!! | TTTTTACTAGTTCTACCTAT+AGG | - | chr5.3:46463399-46463418 | None:intergenic | 25.0% |
| AAACACACCAGAAATGAAAT+TGG | - | chr5.3:46464389-46464408 | None:intergenic | 30.0% | |
| AAACTACTCCAGGAAAAATA+CGG | - | chr5.3:46464627-46464646 | None:intergenic | 30.0% | |
| AAAGTTGTTTAACCTCATTG+TGG | - | chr5.3:46467708-46467727 | None:intergenic | 30.0% | |
| AACAAATGTGAATCCTAAAG+TGG | + | chr5.3:46464979-46464998 | MS.gene99939:intron | 30.0% | |
| AATCTAACGGTGAAAAACAA+TGG | + | chr5.3:46465869-46465888 | MS.gene99939:intron | 30.0% | |
| AATTCGGAATCTTAACAACA+AGG | + | chr5.3:46462457-46462476 | MS.gene99939:CDS | 30.0% | |
| ACCAAGATATGAAATTGAGA+GGG | + | chr5.3:46463821-46463840 | MS.gene99939:intron | 30.0% | |
| ACTAGTTAGTATCTAGTCAT+AGG | + | chr5.3:46464013-46464032 | MS.gene99939:intron | 30.0% | |
| AGCTTATTCATTGTAACTTG+AGG | - | chr5.3:46465934-46465953 | None:intergenic | 30.0% | |
| AGGAGAAACTGATTATTGAA+TGG | + | chr5.3:46464248-46464267 | MS.gene99939:intron | 30.0% | |
| ATACTACATACTCTTGAAGT+AGG | - | chr5.3:46466010-46466029 | None:intergenic | 30.0% | |
| ATATTGCAGATCATAGAGAA+AGG | + | chr5.3:46467466-46467485 | MS.gene99939:intron | 30.0% | |
| ATGACTAGATACTAACTAGT+TGG | - | chr5.3:46464013-46464032 | None:intergenic | 30.0% | |
| ATGGAATTACTTTACTGATC+TGG | + | chr5.3:46464836-46464855 | MS.gene99939:intron | 30.0% | |
| ATTCGGAATCTTAACAACAA+GGG | + | chr5.3:46462458-46462477 | MS.gene99939:CDS | 30.0% | |
| CATTTGAAGATTAAAGCGAA+AGG | + | chr5.3:46462668-46462687 | MS.gene99939:CDS | 30.0% | |
| CTTATCTCCAATTTCATTTC+TGG | + | chr5.3:46464379-46464398 | MS.gene99939:intron | 30.0% | |
| CTTGCGTAAAGTTATAACTA+TGG | + | chr5.3:46467271-46467290 | MS.gene99939:intron | 30.0% | |
| GAAAAAGAAAAAGGCTTCTA+AGG | - | chr5.3:46467299-46467318 | None:intergenic | 30.0% | |
| GACCTGATTATCATAAAAAC+AGG | + | chr5.3:46466943-46466962 | MS.gene99939:intron | 30.0% | |
| GATCAGTAAAGTAATTCCAT+AGG | - | chr5.3:46464836-46464855 | None:intergenic | 30.0% | |
| GCTAATGTTTGCAAACTAAA+TGG | + | chr5.3:46466895-46466914 | MS.gene99939:intron | 30.0% | |
| GGTAGAACTAGTAAAAAATG+TGG | + | chr5.3:46463402-46463421 | MS.gene99939:intron | 30.0% | |
| GGTTAATCCAGTTTATGTTA+AGG | + | chr5.3:46462832-46462851 | MS.gene99939:CDS | 30.0% | |
| GTTGACAAACCAAATGATTT+GGG | + | chr5.3:46465748-46465767 | MS.gene99939:intron | 30.0% | |
| TAACATGATAGCATAGACTA+AGG | + | chr5.3:46466103-46466122 | MS.gene99939:intron | 30.0% | |
| TAGGAAGATACAAATTCCTA+TGG | + | chr5.3:46464817-46464836 | MS.gene99939:intron | 30.0% | |
| TCAAGTTACAATGAATAAGC+TGG | + | chr5.3:46465933-46465952 | MS.gene99939:intron | 30.0% | |
| TCATTAGTTGCAGTCATTAA+AGG | - | chr5.3:46467517-46467536 | None:intergenic | 30.0% | |
| TGAAAAACAATGGTACCAAA+TGG | + | chr5.3:46465879-46465898 | MS.gene99939:intron | 30.0% | |
| TGAAGGTTTACAGGTATAAA+TGG | - | chr5.3:46464355-46464374 | None:intergenic | 30.0% | |
| TGTGATAAAAATTTGTCCCA+GGG | + | chr5.3:46464553-46464572 | MS.gene99939:intron | 30.0% | |
| TGTTGACAAACCAAATGATT+TGG | + | chr5.3:46465747-46465766 | MS.gene99939:intron | 30.0% | |
| TTAGGGTTAGATCAATCTAA+CGG | + | chr5.3:46465856-46465875 | MS.gene99939:intron | 30.0% | |
| TTCAACCCATTATCCATTAT+TGG | + | chr5.3:46465443-46465462 | MS.gene99939:intron | 30.0% | |
| TTTGCTTAAAAGTAAGAGAC+TGG | - | chr5.3:46464686-46464705 | None:intergenic | 30.0% | |
| ! | AGAATTCAAGGATTTTGTGA+TGG | - | chr5.3:46462229-46462248 | None:intergenic | 30.0% |
| ! | ATGAAATTGAGAGGGATTTT+TGG | + | chr5.3:46463829-46463848 | MS.gene99939:intron | 30.0% |
| ! | ATTGTATGATGATAGTGCTA+TGG | + | chr5.3:46462712-46462731 | MS.gene99939:CDS | 30.0% |
| ! | CTTTTGTTCTTGTAATTCAC+TGG | + | chr5.3:46463640-46463659 | MS.gene99939:intron | 30.0% |
| ! | GCACACTGAATAAAATTTTC+TGG | + | chr5.3:46466713-46466732 | MS.gene99939:intron | 30.0% |
| ! | TCAGTAATTGATGAAAGCAT+GGG | - | chr5.3:46466654-46466673 | None:intergenic | 30.0% |
| ! | TTTTTGCCTCACTAGTATTT+GGG | + | chr5.3:46465284-46465303 | MS.gene99939:intron | 30.0% |
| !! | TTGTTGATGGTGTTTATGAA+GGG | + | chr5.3:46463160-46463179 | MS.gene99939:intron | 30.0% |
| !!! | AAGATGGGAGTATTTTTCAT+TGG | - | chr5.3:46467676-46467695 | None:intergenic | 30.0% |
| !!! | AGATGGGAGTATTTTTCATT+GGG | - | chr5.3:46467675-46467694 | None:intergenic | 30.0% |
| !!! | TAGAAAGTGAAAGGGTATTT+TGG | + | chr5.3:46464510-46464529 | MS.gene99939:intron | 30.0% |
| !!! | TGAGTTTAGGGTTTTTTATG+CGG | + | chr5.3:46462631-46462650 | MS.gene99939:CDS | 30.0% |
| !!! | TGCCTGTTTTTATGATAATC+AGG | - | chr5.3:46466948-46466967 | None:intergenic | 30.0% |
| AAAATCCTTGAATTCTCACC+AGG | + | chr5.3:46462233-46462252 | MS.gene99939:CDS | 35.0% | |
| AAATCCTTGAATTCTCACCA+GGG | + | chr5.3:46462234-46462253 | MS.gene99939:CDS | 35.0% | |
| AACCACCATTATAGTCCATT+TGG | - | chr5.3:46465897-46465916 | None:intergenic | 35.0% | |
| AACTTACCCAAATACTAGTG+AGG | - | chr5.3:46465293-46465312 | None:intergenic | 35.0% | |
| AAGAGATCATTAGAGAAGAG+AGG | + | chr5.3:46463471-46463490 | MS.gene99939:intron | 35.0% | |
| AAGCTCTCTAATTCTTGGAA+GGG | + | chr5.3:46464295-46464314 | MS.gene99939:intron | 35.0% | |
| AAGGATAATAGATCGCCATT+TGG | + | chr5.3:46465025-46465044 | MS.gene99939:intron | 35.0% | |
| AAGTAGGATTTCTCTCTGAA+GGG | - | chr5.3:46465994-46466013 | None:intergenic | 35.0% | |
| AATCCAGTTTATGTTAAGGC+TGG | + | chr5.3:46462836-46462855 | MS.gene99939:CDS | 35.0% | |
| AATCGGCACTTTATGTAAGT+TGG | + | chr5.3:46464941-46464960 | MS.gene99939:intron | 35.0% | |
| AATGTAGTGTCAGAAGAGTA+AGG | + | chr5.3:46466177-46466196 | MS.gene99939:intron | 35.0% | |
| ACATCACACCAAGTATACTT+GGG | - | chr5.3:46463919-46463938 | None:intergenic | 35.0% | |
| AGTTTGATGTTGTTAAGGCT+GGG | + | chr5.3:46462783-46462802 | MS.gene99939:CDS | 35.0% | |
| ATATCTTCGGTACTACAACA+TGG | + | chr5.3:46464739-46464758 | MS.gene99939:intron | 35.0% | |
| ATCAATCAGAGTGAAAGTGA+GGG | + | chr5.3:46466202-46466221 | MS.gene99939:intron | 35.0% | |
| ATCTAACCCTAACACTTGTA+TGG | - | chr5.3:46465848-46465867 | None:intergenic | 35.0% | |
| ATGATAGCATAGACTAAGGA+TGG | + | chr5.3:46466107-46466126 | MS.gene99939:intron | 35.0% | |
| ATGTGACTTGAGCTAAATCA+TGG | + | chr5.3:46463935-46463954 | MS.gene99939:intron | 35.0% | |
| CAACGAGATGAACAAGTATA+TGG | + | chr5.3:46465236-46465255 | MS.gene99939:intron | 35.0% | |
| CAACTAATGATTCCAATCCA+TGG | + | chr5.3:46467527-46467546 | MS.gene99939:CDS | 35.0% | |
| CACCAAGATATGAAATTGAG+AGG | + | chr5.3:46463820-46463839 | MS.gene99939:intron | 35.0% | |
| CATTAGCAAGTTACAAGCAA+AGG | + | chr5.3:46465006-46465025 | MS.gene99939:intron | 35.0% | |
| CCATCTTCCCAATTAACAAA+TGG | - | chr5.3:46463120-46463139 | None:intergenic | 35.0% | |
| CTCAGTAATTGATGAAAGCA+TGG | - | chr5.3:46466655-46466674 | None:intergenic | 35.0% | |
| CTGAAACTACAGCAGTATTA+CGG | - | chr5.3:46463987-46464006 | None:intergenic | 35.0% | |
| CTGTGATAAAAATTTGTCCC+AGG | + | chr5.3:46464552-46464571 | MS.gene99939:intron | 35.0% | |
| CTTTATTCCCTTCATGTACA+CGG | - | chr5.3:46467837-46467856 | None:intergenic | 35.0% | |
| GAATTACTTTACTGATCTGG+AGG | + | chr5.3:46464839-46464858 | MS.gene99939:intron | 35.0% | |
| GAGAAGCTAAATAGTGAGAA+TGG | - | chr5.3:46464181-46464200 | None:intergenic | 35.0% | |
| GAGGCAAAAAGAATATGCAA+TGG | - | chr5.3:46465274-46465293 | None:intergenic | 35.0% | |
| GAGGTCAATCTCTTAATCAT+GGG | - | chr5.3:46465560-46465579 | None:intergenic | 35.0% | |
| GAGTCAGTTTGATGTTGTTA+AGG | + | chr5.3:46462778-46462797 | MS.gene99939:CDS | 35.0% | |
| GCAAAAAGAATATGCAATGG+AGG | - | chr5.3:46465271-46465290 | None:intergenic | 35.0% | |
| GCAGAGTTTACTGTTGAAAA+AGG | + | chr5.3:46466829-46466848 | MS.gene99939:intron | 35.0% | |
| GCTAAGGAATGACAATAATC+AGG | + | chr5.3:46465476-46465495 | MS.gene99939:intron | 35.0% | |
| GCTTTAATCTTCAAATGCCA+TGG | - | chr5.3:46462665-46462684 | None:intergenic | 35.0% | |
| GTAATTCACTGGTCATATCA+AGG | + | chr5.3:46463651-46463670 | MS.gene99939:intron | 35.0% | |
| GTGATTGTCTAACACAATAG+AGG | + | chr5.3:46465965-46465984 | MS.gene99939:intron | 35.0% | |
| GTTGAATGAACAAAAACGGA+TGG | + | chr5.3:46465380-46465399 | MS.gene99939:intron | 35.0% | |
| TAGGGTTTGATGTGTTTACT+GGG | + | chr5.3:46466257-46466276 | MS.gene99939:intron | 35.0% | |
| TATCAATCAGAGTGAAAGTG+AGG | + | chr5.3:46466201-46466220 | MS.gene99939:intron | 35.0% | |
| TATTGGCCATCTTAAAGCTA+AGG | + | chr5.3:46465460-46465479 | MS.gene99939:intron | 35.0% | |
| TCAAACAAACGCTTACGATT+GGG | - | chr5.3:46466436-46466455 | None:intergenic | 35.0% | |
| TCCCTCTCAATTTCATATCT+TGG | - | chr5.3:46463825-46463844 | None:intergenic | 35.0% | |
| TCGATAGTGAGTTTCTTTGT+TGG | - | chr5.3:46465612-46465631 | None:intergenic | 35.0% | |
| TCTATACGGTGAAATGTGAT+TGG | + | chr5.3:46462988-46463007 | MS.gene99939:intron | 35.0% | |
| TGATAGCATAGACTAAGGAT+GGG | + | chr5.3:46466108-46466127 | MS.gene99939:intron | 35.0% | |
| TGGGTCTGTAAACTACATAA+GGG | - | chr5.3:46465147-46465166 | None:intergenic | 35.0% | |
| TGTGACTTGAGCTAAATCAT+GGG | + | chr5.3:46463936-46463955 | MS.gene99939:intron | 35.0% | |
| TTAAAAGTAAGAGACTGGAC+AGG | - | chr5.3:46464681-46464700 | None:intergenic | 35.0% | |
| TTACTACTTGGCTTATAGAC+AGG | - | chr5.3:46466332-46466351 | None:intergenic | 35.0% | |
| TTAGGGTTTGATGTGTTTAC+TGG | + | chr5.3:46466256-46466275 | MS.gene99939:intron | 35.0% | |
| TTGCTAATGTTGACCACTTT+AGG | - | chr5.3:46464995-46465014 | None:intergenic | 35.0% | |
| TTGGGTCTGTAAACTACATA+AGG | - | chr5.3:46465148-46465167 | None:intergenic | 35.0% | |
| ! | AAAATGTGGACTGTGGAAAT+TGG | + | chr5.3:46463416-46463435 | MS.gene99939:intron | 35.0% |
| ! | AGGATTCACATTTGTTGCAA+GGG | - | chr5.3:46464975-46464994 | None:intergenic | 35.0% |
| ! | CAATCTGAAACTACAATACC+AGG | - | chr5.3:46464105-46464124 | None:intergenic | 35.0% |
| ! | CCATTTGTTAATTGGGAAGA+TGG | + | chr5.3:46463117-46463136 | MS.gene99939:intron | 35.0% |
| ! | CTAGTAAAAAATGTGGACTG+TGG | + | chr5.3:46463409-46463428 | MS.gene99939:intron | 35.0% |
| ! | CTGGGACAAATTTTTATCAC+AGG | - | chr5.3:46464554-46464573 | None:intergenic | 35.0% |
| ! | CTTTTTGCCTCACTAGTATT+TGG | + | chr5.3:46465283-46465302 | MS.gene99939:intron | 35.0% |
| ! | GTGGGTTGAATGAACAAAAA+CGG | + | chr5.3:46465376-46465395 | MS.gene99939:intron | 35.0% |
| ! | GTTTGAGTTTCTCATCATTC+AGG | - | chr5.3:46465582-46465601 | None:intergenic | 35.0% |
| ! | TAGGATTCACATTTGTTGCA+AGG | - | chr5.3:46464976-46464995 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGTTGAGAGA+AGG | - | chr5.3:46462070-46462089 | None:intergenic | 35.0% |
| ! | TTTTGCTCAAAACAGGACTT+TGG | + | chr5.3:46464052-46464071 | MS.gene99939:intron | 35.0% |
| !! | AGATGGCCAATAATGGATAA+TGG | - | chr5.3:46465452-46465471 | None:intergenic | 35.0% |
| !! | AGCTTTAAGATGGCCAATAA+TGG | - | chr5.3:46465459-46465478 | None:intergenic | 35.0% |
| !! | GAATTTGATGAAGAGTGTTG+AGG | + | chr5.3:46462736-46462755 | MS.gene99939:CDS | 35.0% |
| !! | GATGGCCAATAATGGATAAT+GGG | - | chr5.3:46465451-46465470 | None:intergenic | 35.0% |
| !! | GTCATTCCTTAGCTTTAAGA+TGG | - | chr5.3:46465469-46465488 | None:intergenic | 35.0% |
| !! | GTTGTTGATGGTGTTTATGA+AGG | + | chr5.3:46463159-46463178 | MS.gene99939:intron | 35.0% |
| !! | GTTTTAATCTGATCAGTCGT+CGG | - | chr5.3:46466546-46466565 | None:intergenic | 35.0% |
| !! | TACCAAATGGACTATAATGG+TGG | + | chr5.3:46465892-46465911 | MS.gene99939:intron | 35.0% |
| !! | TGGTACCAAATGGACTATAA+TGG | + | chr5.3:46465889-46465908 | MS.gene99939:intron | 35.0% |
| !! | TGTTGATGGTGTTTATGAAG+GGG | + | chr5.3:46463161-46463180 | MS.gene99939:intron | 35.0% |
| !! | TTCAAGGATTTTGTGATGGA+TGG | - | chr5.3:46462225-46462244 | None:intergenic | 35.0% |
| !!! | AATGAGTTTTTTTGTCCTCG+TGG | - | chr5.3:46463578-46463597 | None:intergenic | 35.0% |
| !!! | CAGGTTTTAACTACGTTTGA+TGG | - | chr5.3:46467423-46467442 | None:intergenic | 35.0% |
| !!! | GAATGGTTGTTTTTATGGGA+GGG | + | chr5.3:46464265-46464284 | MS.gene99939:intron | 35.0% |
| !!! | GATGGGAGTATTTTTCATTG+GGG | - | chr5.3:46467674-46467693 | None:intergenic | 35.0% |
| !!! | TAACAACAAGGGTTTTGTTC+CGG | + | chr5.3:46462469-46462488 | MS.gene99939:CDS | 35.0% |
| !!! | TGAATGGTTGTTTTTATGGG+AGG | + | chr5.3:46464264-46464283 | MS.gene99939:intron | 35.0% |
| !!! | TTAGGGTTTTTTATGCGGAT+CGG | + | chr5.3:46462636-46462655 | MS.gene99939:CDS | 35.0% |
| AAATGCAAAAATACCCCTGC+AGG | + | chr5.3:46466489-46466508 | MS.gene99939:intron | 40.0% | |
| AAGAGATATCACAGAGAGGA+AGG | + | chr5.3:46464465-46464484 | MS.gene99939:intron | 40.0% | |
| AAGTGCACCATACAAGTGTT+AGG | + | chr5.3:46465838-46465857 | MS.gene99939:intron | 40.0% | |
| ACCAAAATGGGACGTTCAAT+TGG | + | chr5.3:46465414-46465433 | MS.gene99939:intron | 40.0% | |
| ACCAAGACTGTCGAATTTCT+TGG | + | chr5.3:46464322-46464341 | MS.gene99939:intron | 40.0% | |
| ACTCCAGCCTTAACATAAAC+TGG | - | chr5.3:46462842-46462861 | None:intergenic | 40.0% | |
| AGACCAAGCTCTCTAATTCT+TGG | + | chr5.3:46464290-46464309 | MS.gene99939:intron | 40.0% | |
| AGACTGTCGAATTTCTTGGA+AGG | + | chr5.3:46464326-46464345 | MS.gene99939:intron | 40.0% | |
| AGATGTTGGTACATTGAAGG+AGG | + | chr5.3:46463867-46463886 | MS.gene99939:intron | 40.0% | |
| AGCCTCTTCTTCTCTTTACA+TGG | + | chr5.3:46462258-46462277 | MS.gene99939:CDS | 40.0% | |
| AGCTTCAGTAAACGAACTCA+AGG | - | chr5.3:46467882-46467901 | None:intergenic | 40.0% | |
| AGTGCACCATACAAGTGTTA+GGG | + | chr5.3:46465839-46465858 | MS.gene99939:intron | 40.0% | |
| AGTGGAGAAAGAGATATGAG+AGG | + | chr5.3:46464418-46464437 | MS.gene99939:intron | 40.0% | |
| AGTGTGCCAAAACTCAACAA+TGG | - | chr5.3:46466700-46466719 | None:intergenic | 40.0% | |
| ATGCTGCACGTGAAAATAAC+AGG | - | chr5.3:46467804-46467823 | None:intergenic | 40.0% | |
| ATTCTCCTCTTCATTTCGTC+AGG | - | chr5.3:46463256-46463275 | None:intergenic | 40.0% | |
| ATTGTGGTCATGAAGCAAGA+TGG | - | chr5.3:46467692-46467711 | None:intergenic | 40.0% | |
| ATTTATCATCCTGTGCACCA+CGG | - | chr5.3:46462412-46462431 | None:intergenic | 40.0% | |
| CAAGCTCTCTAATTCTTGGA+AGG | + | chr5.3:46464294-46464313 | MS.gene99939:intron | 40.0% | |
| CACATCACACCAAGTATACT+TGG | - | chr5.3:46463920-46463939 | None:intergenic | 40.0% | |
| CAGTTTGATGTTGTTAAGGC+TGG | + | chr5.3:46462782-46462801 | MS.gene99939:CDS | 40.0% | |
| CATCACACCAAGTATACTTG+GGG | - | chr5.3:46463918-46463937 | None:intergenic | 40.0% | |
| CGACATCTCTATTCTCTACT+TGG | - | chr5.3:46463777-46463796 | None:intergenic | 40.0% | |
| CGTAATACTGCTGTAGTTTC+AGG | + | chr5.3:46463985-46464004 | MS.gene99939:intron | 40.0% | |
| CGTGTACATGAAGGGAATAA+AGG | + | chr5.3:46467835-46467854 | MS.gene99939:CDS | 40.0% | |
| CTAATGATTCCAATCCATGG+TGG | + | chr5.3:46467530-46467549 | MS.gene99939:CDS | 40.0% | |
| CTCAGATACTACTACTACAC+TGG | - | chr5.3:46466867-46466886 | None:intergenic | 40.0% | |
| CTGTCGAATATATCGAGCAT+CGG | - | chr5.3:46467626-46467645 | None:intergenic | 40.0% | |
| CTTCCAAGAATTAGAGAGCT+TGG | - | chr5.3:46464296-46464315 | None:intergenic | 40.0% | |
| GAAAACTAACCACCATGGAT+TGG | - | chr5.3:46467542-46467561 | None:intergenic | 40.0% | |
| GAAGTAGGATTTCTCTCTGA+AGG | - | chr5.3:46465995-46466014 | None:intergenic | 40.0% | |
| GACTGTCGAATTTCTTGGAA+GGG | + | chr5.3:46464327-46464346 | MS.gene99939:intron | 40.0% | |
| GAGAAAGAGATATCACAGAG+AGG | + | chr5.3:46464461-46464480 | MS.gene99939:intron | 40.0% | |
| GAGAGATGTTGGTACATTGA+AGG | + | chr5.3:46463864-46463883 | MS.gene99939:intron | 40.0% | |
| GAGGAAATGAGTCTCTTGTT+TGG | + | chr5.3:46463490-46463509 | MS.gene99939:intron | 40.0% | |
| GCTCGATATATTCGACAGAA+AGG | + | chr5.3:46467628-46467647 | MS.gene99939:CDS | 40.0% | |
| GGAGGTCAATCTCTTAATCA+TGG | - | chr5.3:46465561-46465580 | None:intergenic | 40.0% | |
| GTAAAAGAGTTCGTGCAGAA+TGG | - | chr5.3:46467764-46467783 | None:intergenic | 40.0% | |
| GTATGGTGCACTTTCTAAAC+TGG | - | chr5.3:46465831-46465850 | None:intergenic | 40.0% | |
| GTCAAACAAACGCTTACGAT+TGG | - | chr5.3:46466437-46466456 | None:intergenic | 40.0% | |
| GTGACTTGAGCTAAATCATG+GGG | + | chr5.3:46463937-46463956 | MS.gene99939:intron | 40.0% | |
| GTGGAGAAAGAGATATGAGA+GGG | + | chr5.3:46464419-46464438 | MS.gene99939:intron | 40.0% | |
| GTTAGATGAAGGTCAAGCTT+CGG | + | chr5.3:46462601-46462620 | MS.gene99939:CDS | 40.0% | |
| GTTCATTGCAGACATCAAGA+GGG | - | chr5.3:46466781-46466800 | None:intergenic | 40.0% | |
| GTTGAATTCCGAGGTTGTTT+CGG | + | chr5.3:46462811-46462830 | MS.gene99939:CDS | 40.0% | |
| GTTGCAACTCCAACCAAAAT+GGG | + | chr5.3:46465402-46465421 | MS.gene99939:intron | 40.0% | |
| GTTGGATTTGCGTTAGATGA+AGG | + | chr5.3:46462590-46462609 | MS.gene99939:CDS | 40.0% | |
| GTTGTGGATGCAAGAATTTC+AGG | - | chr5.3:46467604-46467623 | None:intergenic | 40.0% | |
| TAAGATTCCGAATTGCTTCG+AGG | - | chr5.3:46462451-46462470 | None:intergenic | 40.0% | |
| TAAGGGGACGAGAATCTTAT+AGG | + | chr5.3:46465324-46465343 | MS.gene99939:intron | 40.0% | |
| TACGGTGAAATGTGATTGGA+TGG | + | chr5.3:46462992-46463011 | MS.gene99939:intron | 40.0% | |
| TCCAAGAAATTCGACAGTCT+TGG | - | chr5.3:46464326-46464345 | None:intergenic | 40.0% | |
| TGAGTTTCTCATCATTCAGG+AGG | - | chr5.3:46465579-46465598 | None:intergenic | 40.0% | |
| TGCAATACCTCGAAGCAATT+CGG | + | chr5.3:46462441-46462460 | MS.gene99939:CDS | 40.0% | |
| TGCTTGAAAACTAACCACCA+TGG | - | chr5.3:46467547-46467566 | None:intergenic | 40.0% | |
| TGGATTAACCGAAACAACCT+CGG | - | chr5.3:46462822-46462841 | None:intergenic | 40.0% | |
| TGTGATGAATGTGCAACCTT+CGG | + | chr5.3:46463186-46463205 | MS.gene99939:CDS | 40.0% | |
| TGTTCATTGCAGACATCAAG+AGG | - | chr5.3:46466782-46466801 | None:intergenic | 40.0% | |
| TTACTTTACTGATCTGGAGG+AGG | + | chr5.3:46464842-46464861 | MS.gene99939:intron | 40.0% | |
| TTCTTCTCTTTACATGGCCT+GGG | + | chr5.3:46462264-46462283 | MS.gene99939:CDS | 40.0% | |
| TTGTGGTCATGAAGCAAGAT+GGG | - | chr5.3:46467691-46467710 | None:intergenic | 40.0% | |
| TTTGGTCAGTCAACTTGAGT+TGG | - | chr5.3:46466472-46466491 | None:intergenic | 40.0% | |
| ! | ATCGCTTCTTTTCTCAAGTG+AGG | + | chr5.3:46463552-46463571 | MS.gene99939:intron | 40.0% |
| ! | TAAGCGTTTGTTTGACTCGT+TGG | + | chr5.3:46466441-46466460 | MS.gene99939:intron | 40.0% |
| ! | TACCTTTTGAGCAGAACAGA+AGG | + | chr5.3:46463797-46463816 | MS.gene99939:intron | 40.0% |
| ! | TCCAATTGAACGTCCCATTT+TGG | - | chr5.3:46465418-46465437 | None:intergenic | 40.0% |
| ! | TTCATCTCGTTGATTACGCT+TGG | - | chr5.3:46465228-46465247 | None:intergenic | 40.0% |
| !! | AATATATCGAGCATCGGTTG+TGG | - | chr5.3:46467620-46467639 | None:intergenic | 40.0% |
| !! | ACTCGGGTCTGAAAGTATTT+AGG | + | chr5.3:46466238-46466257 | MS.gene99939:intron | 40.0% |
| !! | ATTGAACGTCCCATTTTGGT+TGG | - | chr5.3:46465414-46465433 | None:intergenic | 40.0% |
| !! | CTCGGGTCTGAAAGTATTTA+GGG | + | chr5.3:46466239-46466258 | MS.gene99939:intron | 40.0% |
| !! | GGATTTTTGGAAGCTGTTGA+GGG | + | chr5.3:46463842-46463861 | MS.gene99939:intron | 40.0% |
| !! | GTCGTTTTCGTCTTCTGAAT+AGG | - | chr5.3:46462093-46462112 | None:intergenic | 40.0% |
| !! | TGAATGAGTTGATGGCTGTT+CGG | + | chr5.3:46467241-46467260 | MS.gene99939:intron | 40.0% |
| !! | TTCGGTTGGTGATGAGTTTA+GGG | + | chr5.3:46462619-46462638 | MS.gene99939:CDS | 40.0% |
| !!! | AGGATTTTGTGATGGATGGA+AGG | - | chr5.3:46462221-46462240 | None:intergenic | 40.0% |
| !!! | ATGGTGGTTAGTTTTCAAGC+AGG | + | chr5.3:46467546-46467565 | MS.gene99939:CDS | 40.0% |
| !!! | CAGAAGCTGGTTTTGATCTT+AGG | + | chr5.3:46463212-46463231 | MS.gene99939:CDS | 40.0% |
| !!! | GGATTTTGTGATGGATGGAA+GGG | - | chr5.3:46462220-46462239 | None:intergenic | 40.0% |
| !!! | TGAGCTCTGTTGCTGTTTTT+GGG | + | chr5.3:46466671-46466690 | MS.gene99939:intron | 40.0% |
| !!! | TGCAGGGGTATTTTTGCATT+TGG | - | chr5.3:46466490-46466509 | None:intergenic | 40.0% |
| AAAGCATGGGAGAAGACAAG+TGG | - | chr5.3:46466641-46466660 | None:intergenic | 45.0% | |
| AACTTCCTCATCAGGGACTA+GGG | - | chr5.3:46462513-46462532 | None:intergenic | 45.0% | |
| AATCAGAGTGAAAGTGAGGG+AGG | + | chr5.3:46466205-46466224 | MS.gene99939:intron | 45.0% | |
| AATCCACCAACTTCCTCATC+AGG | - | chr5.3:46462521-46462540 | None:intergenic | 45.0% | |
| ACAGTGTCAAACCAGAGCAA+GGG | - | chr5.3:46464082-46464101 | None:intergenic | 45.0% | |
| ACGAGATACCGTGTACATGA+AGG | + | chr5.3:46467826-46467845 | MS.gene99939:CDS | 45.0% | |
| ACGATTGGGCTAAAACGGTT+CGG | - | chr5.3:46466422-46466441 | None:intergenic | 45.0% | |
| ACTACATTTCACCCACGAGT+TGG | - | chr5.3:46466165-46466184 | None:intergenic | 45.0% | |
| ACTTGAGCTAAATCATGGGG+TGG | + | chr5.3:46463940-46463959 | MS.gene99939:intron | 45.0% | |
| ACTTTGGATTTCCCTTGCTC+TGG | + | chr5.3:46464068-46464087 | MS.gene99939:intron | 45.0% | |
| AGAGGAGAATTGCTGCTGAA+TGG | + | chr5.3:46463266-46463285 | MS.gene99939:CDS | 45.0% | |
| AGATATCACAGAGAGGAAGG+AGG | + | chr5.3:46464468-46464487 | MS.gene99939:intron | 45.0% | |
| AGCCATCAACTCATTCAACG+AGG | - | chr5.3:46467238-46467257 | None:intergenic | 45.0% | |
| AGCCATTTAGAAGGTTCAGC+AGG | - | chr5.3:46462341-46462360 | None:intergenic | 45.0% | |
| AGGAAAAATACGGAGCAAGG+GGG | - | chr5.3:46464617-46464636 | None:intergenic | 45.0% | |
| AGGACCCATCAGAGACTATT+TGG | + | chr5.3:46467486-46467505 | MS.gene99939:CDS | 45.0% | |
| AGGGACGAGAATAAATCCAG+TGG | - | chr5.3:46465128-46465147 | None:intergenic | 45.0% | |
| AGTGGTCAGAAAAGCAGAGT+CGG | - | chr5.3:46466754-46466773 | None:intergenic | 45.0% | |
| ATCCACCAACTTCCTCATCA+GGG | - | chr5.3:46462520-46462539 | None:intergenic | 45.0% | |
| ATTAAAGCGAAAGGGCAACC+GGG | + | chr5.3:46462677-46462696 | MS.gene99939:CDS | 45.0% | |
| ATTGGGGAGAAACCAAGTAC+AGG | - | chr5.3:46467658-46467677 | None:intergenic | 45.0% | |
| ATTTCGTCAGGATCTGTCGT+AGG | - | chr5.3:46463244-46463263 | None:intergenic | 45.0% | |
| ATTTGTCCCAGGGTTTAGTG+AGG | + | chr5.3:46464563-46464582 | MS.gene99939:intron | 45.0% | |
| CAAAAATACCCCTGCAGGTA+AGG | + | chr5.3:46466494-46466513 | MS.gene99939:intron | 45.0% | |
| CAGATCCTGACGAAATGAAG+AGG | + | chr5.3:46463248-46463267 | MS.gene99939:CDS | 45.0% | |
| CAGCTGGAGAAAAACTTTCG+AGG | + | chr5.3:46467578-46467597 | MS.gene99939:CDS | 45.0% | |
| CAGGAAAAATACGGAGCAAG+GGG | - | chr5.3:46464618-46464637 | None:intergenic | 45.0% | |
| CATAGACTAAGGATGGGCAT+CGG | + | chr5.3:46466114-46466133 | MS.gene99939:intron | 45.0% | |
| CATATGCTCTCTGACACTGA+TGG | + | chr5.3:46466807-46466826 | MS.gene99939:intron | 45.0% | |
| CCAGGAAAAATACGGAGCAA+GGG | - | chr5.3:46464619-46464638 | None:intergenic | 45.0% | |
| CGAGATACCGTGTACATGAA+GGG | + | chr5.3:46467827-46467846 | MS.gene99939:CDS | 45.0% | |
| CGCTTACGATTGGGCTAAAA+CGG | - | chr5.3:46466427-46466446 | None:intergenic | 45.0% | |
| CTACATTTCACCCACGAGTT+GGG | - | chr5.3:46466164-46466183 | None:intergenic | 45.0% | |
| CTTCTTCTCTTTACATGGCC+TGG | + | chr5.3:46462263-46462282 | MS.gene99939:CDS | 45.0% | |
| CTTGCTTCATGACCACAATG+AGG | + | chr5.3:46467693-46467712 | MS.gene99939:CDS | 45.0% | |
| GAAAGAGATATGAGAGGGAG+TGG | + | chr5.3:46464424-46464443 | MS.gene99939:intron | 45.0% | |
| GACCCATCAGAGACTATTTG+GGG | + | chr5.3:46467488-46467507 | MS.gene99939:CDS | 45.0% | |
| GAGGAGAATTGCTGCTGAAT+GGG | + | chr5.3:46463267-46463286 | MS.gene99939:CDS | 45.0% | |
| GAGTAGTCCCCAAGTATACT+TGG | + | chr5.3:46463908-46463927 | MS.gene99939:intron | 45.0% | |
| GATATCACAGAGAGGAAGGA+GGG | + | chr5.3:46464469-46464488 | MS.gene99939:intron | 45.0% | |
| GATTAAAGCGAAAGGGCAAC+CGG | + | chr5.3:46462676-46462695 | MS.gene99939:CDS | 45.0% | |
| GCCAAACTCACATCATGAGT+GGG | - | chr5.3:46462866-46462885 | None:intergenic | 45.0% | |
| GCCATTTAGAAGGTTCAGCA+GGG | - | chr5.3:46462340-46462359 | None:intergenic | 45.0% | |
| GCTTCACTGCCCAAATCATT+TGG | - | chr5.3:46465760-46465779 | None:intergenic | 45.0% | |
| GGACCCATCAGAGACTATTT+GGG | + | chr5.3:46467487-46467506 | MS.gene99939:CDS | 45.0% | |
| GGCCATGTAAAGAGAAGAAG+AGG | - | chr5.3:46462263-46462282 | None:intergenic | 45.0% | |
| GGTGTGTTTCAGAAAGAGAG+TGG | + | chr5.3:46464400-46464419 | MS.gene99939:intron | 45.0% | |
| GGTTGCAACTCCAACCAAAA+TGG | + | chr5.3:46465401-46465420 | MS.gene99939:intron | 45.0% | |
| GTAATCTGGATTTGGGTGTG+CGG | - | chr5.3:46462156-46462175 | None:intergenic | 45.0% | |
| GTTGGTACATTGAAGGAGGT+GGG | + | chr5.3:46463871-46463890 | MS.gene99939:intron | 45.0% | |
| TCAGTGCACTATGGACCAAA+TGG | - | chr5.3:46465043-46465062 | None:intergenic | 45.0% | |
| TCCAGGAAAAATACGGAGCA+AGG | - | chr5.3:46464620-46464639 | None:intergenic | 45.0% | |
| TCCCACTCATGATGTGAGTT+TGG | + | chr5.3:46462862-46462881 | MS.gene99939:intron | 45.0% | |
| TCCCTGCTGAACCTTCTAAA+TGG | + | chr5.3:46462336-46462355 | MS.gene99939:CDS | 45.0% | |
| TGATGTTGTTAAGGCTGGGA+AGG | + | chr5.3:46462787-46462806 | MS.gene99939:CDS | 45.0% | |
| TGATTACGCTTGGAAGCAAC+AGG | - | chr5.3:46465218-46465237 | None:intergenic | 45.0% | |
| TGCCAAACTCACATCATGAG+TGG | - | chr5.3:46462867-46462886 | None:intergenic | 45.0% | |
| TGCCTTCTGTTCTGCTCAAA+AGG | - | chr5.3:46463802-46463821 | None:intergenic | 45.0% | |
| TGTTGGTACATTGAAGGAGG+TGG | + | chr5.3:46463870-46463889 | MS.gene99939:intron | 45.0% | |
| TGTTTATGCGAAGGTAGCGT+TGG | - | chr5.3:46462133-46462152 | None:intergenic | 45.0% | |
| TTGGGCAGGTTATGCAGTTT+GGG | - | chr5.3:46466146-46466165 | None:intergenic | 45.0% | |
| TTTATCATCCTGTGCACCAC+GGG | - | chr5.3:46462411-46462430 | None:intergenic | 45.0% | |
| TTTGTCCCAGGGTTTAGTGA+GGG | + | chr5.3:46464564-46464583 | MS.gene99939:intron | 45.0% | |
| ! | CATCAGTGTCAGAGAGCATA+TGG | - | chr5.3:46466809-46466828 | None:intergenic | 45.0% |
| ! | CGAAAGTTTTTCTCCAGCTG+AGG | - | chr5.3:46467578-46467597 | None:intergenic | 45.0% |
| ! | CGGAGGTGTAATCTGGATTT+GGG | - | chr5.3:46462163-46462182 | None:intergenic | 45.0% |
| ! | GAAATAGCGGAGGTGTAATC+TGG | - | chr5.3:46462170-46462189 | None:intergenic | 45.0% |
| ! | GGGACACCATTGTTGAGTTT+TGG | + | chr5.3:46466691-46466710 | MS.gene99939:intron | 45.0% |
| ! | TAGCGTTGGAAACGACTGAT+TGG | - | chr5.3:46462119-46462138 | None:intergenic | 45.0% |
| ! | TGCCTCGTTGAATGAGTTGA+TGG | + | chr5.3:46467233-46467252 | MS.gene99939:intron | 45.0% |
| ! | TTTATGCGGATCGGTTTCCA+TGG | + | chr5.3:46462645-46462664 | MS.gene99939:CDS | 45.0% |
| !! | AAGTTGGTGGATTTGGTGGT+TGG | + | chr5.3:46462528-46462547 | MS.gene99939:CDS | 45.0% |
| !! | AGAGTGTTGAGGTTGTGAGT+AGG | + | chr5.3:46462747-46462766 | MS.gene99939:CDS | 45.0% |
| !! | AGGGAGGCATTTAGCTAACT+CGG | + | chr5.3:46466221-46466240 | MS.gene99939:intron | 45.0% |
| !! | CAGAAAGGCATTCCTGTACT+TGG | + | chr5.3:46467643-46467662 | MS.gene99939:CDS | 45.0% |
| !! | CTTCGGTTGGTGATGAGTTT+AGG | + | chr5.3:46462618-46462637 | MS.gene99939:CDS | 45.0% |
| !! | GATGAGGAAGTTGGTGGATT+TGG | + | chr5.3:46462521-46462540 | MS.gene99939:CDS | 45.0% |
| !! | GGGATTTTTGGAAGCTGTTG+AGG | + | chr5.3:46463841-46463860 | MS.gene99939:intron | 45.0% |
| !! | TTTGTGATGGATGGAAGGGA+TGG | - | chr5.3:46462216-46462235 | None:intergenic | 45.0% |
| !!! | ACAAGGGTTTTGTTCCGGTT+CGG | + | chr5.3:46462474-46462493 | MS.gene99939:CDS | 45.0% |
| !!! | CTGAGCTCTGTTGCTGTTTT+TGG | + | chr5.3:46466670-46466689 | MS.gene99939:intron | 45.0% |
| !!! | TTTTTTTTTTTTTTTTGAAT+CGG | + | chr5.3:46464924-46464943 | MS.gene99939:intron | 5.0% |
| AAAAGAGTTGGACGCAGCAC+AGG | - | chr5.3:46463625-46463644 | None:intergenic | 50.0% | |
| AAATACCCCTGCAGGTAAGG+TGG | + | chr5.3:46466497-46466516 | MS.gene99939:intron | 50.0% | |
| AAGAGAAGAAGAGGCTTCCC+TGG | - | chr5.3:46462254-46462273 | None:intergenic | 50.0% | |
| AATACCCCTGCAGGTAAGGT+GGG | + | chr5.3:46466498-46466517 | MS.gene99939:intron | 50.0% | |
| ACGCCCCAAATAGTCTCTGA+TGG | - | chr5.3:46467494-46467513 | None:intergenic | 50.0% | |
| AGCTGTTGAGGGAGAGATGT+TGG | + | chr5.3:46463853-46463872 | MS.gene99939:intron | 50.0% | |
| AGGGGAGAAAAGGTTGTGGA+TGG | + | chr5.3:46465797-46465816 | MS.gene99939:intron | 50.0% | |
| AGTCGAGATGGGAATTGAGG+AGG | - | chr5.3:46462313-46462332 | None:intergenic | 50.0% | |
| ATGGATGGAAGGGATGGAGT+TGG | - | chr5.3:46462210-46462229 | None:intergenic | 50.0% | |
| CAACTTCCTCATCAGGGACT+AGG | - | chr5.3:46462514-46462533 | None:intergenic | 50.0% | |
| CAGAGTCGAGATGGGAATTG+AGG | - | chr5.3:46462316-46462335 | None:intergenic | 50.0% | |
| CATTGCAGACATCAAGAGGG+TGG | - | chr5.3:46466778-46466797 | None:intergenic | 50.0% | |
| CGCCCCAAATAGTCTCTGAT+GGG | - | chr5.3:46467493-46467512 | None:intergenic | 50.0% | |
| CTACTCCCTCACTAAACCCT+GGG | - | chr5.3:46464572-46464591 | None:intergenic | 50.0% | |
| CTAGTCCCTGATGAGGAAGT+TGG | + | chr5.3:46462512-46462531 | MS.gene99939:CDS | 50.0% | |
| CTGGAGGAGGTTGACAACTA+TGG | + | chr5.3:46464855-46464874 | MS.gene99939:intron | 50.0% | |
| GACAGTGTCAAACCAGAGCA+AGG | - | chr5.3:46464083-46464102 | None:intergenic | 50.0% | |
| GAGAAATGAACCGTCCGAAC+CGG | - | chr5.3:46462491-46462510 | None:intergenic | 50.0% | |
| GAGATGGGAATTGAGGAGGA+TGG | - | chr5.3:46462309-46462328 | None:intergenic | 50.0% | |
| GATGAAGGTCAAGCTTCGGT+TGG | + | chr5.3:46462605-46462624 | MS.gene99939:CDS | 50.0% | |
| GATGAATGTGCAACCTTCGG+AGG | + | chr5.3:46463189-46463208 | MS.gene99939:CDS | 50.0% | |
| GCTTCCCTGGTGAGAATTCA+AGG | - | chr5.3:46462241-46462260 | None:intergenic | 50.0% | |
| GGAAGGGATGGAGTTGGATT+GGG | - | chr5.3:46462204-46462223 | None:intergenic | 50.0% | |
| GGAGGATGGAGCCATTTAGA+AGG | - | chr5.3:46462350-46462369 | None:intergenic | 50.0% | |
| GGAGGTGAGGTAGGAAATAG+CGG | - | chr5.3:46462183-46462202 | None:intergenic | 50.0% | |
| GGGAATTGAGGAGGATGGAA+GGG | - | chr5.3:46462304-46462323 | None:intergenic | 50.0% | |
| GGGAGAAGACAAGTGGACAT+TGG | - | chr5.3:46466634-46466653 | None:intergenic | 50.0% | |
| GGGGAGAAAAGGTTGTGGAT+GGG | + | chr5.3:46465798-46465817 | MS.gene99939:intron | 50.0% | |
| GTTGGGCAGGTTATGCAGTT+TGG | - | chr5.3:46466147-46466166 | None:intergenic | 50.0% | |
| TAATCTGATCAGTCGTCGGC+TGG | - | chr5.3:46466542-46466561 | None:intergenic | 50.0% | |
| TCTACTCCCTCACTAAACCC+TGG | - | chr5.3:46464573-46464592 | None:intergenic | 50.0% | |
| TGCTGGAAATTCAGAGGGGA+AGG | - | chr5.3:46463680-46463699 | None:intergenic | 50.0% | |
| TGGAAGGGATGGAGTTGGAT+TGG | - | chr5.3:46462205-46462224 | None:intergenic | 50.0% | |
| TGGGAATTGAGGAGGATGGA+AGG | - | chr5.3:46462305-46462324 | None:intergenic | 50.0% | |
| TGGTGGTTGGCAGTTGTTTG+CGG | + | chr5.3:46462541-46462560 | MS.gene99939:CDS | 50.0% | |
| TTAAAGCGAAAGGGCAACCG+GGG | + | chr5.3:46462678-46462697 | MS.gene99939:CDS | 50.0% | |
| TTACGCTTGGAAGCAACAGG+AGG | - | chr5.3:46465215-46465234 | None:intergenic | 50.0% | |
| TTTCTCCCTAGTCCCTGATG+AGG | + | chr5.3:46462505-46462524 | MS.gene99939:CDS | 50.0% | |
| ! | AAGGAGGTGGGTCTGAAACA+AGG | + | chr5.3:46463883-46463902 | MS.gene99939:intron | 50.0% |
| ! | AATCTGATCAGTCGTCGGCT+GGG | - | chr5.3:46466541-46466560 | None:intergenic | 50.0% |
| ! | ATGATTTGGGCAGTGAAGCG+TGG | + | chr5.3:46465761-46465780 | MS.gene99939:intron | 50.0% |
| ! | CCCTTGCTCCGTATTTTTCC+TGG | + | chr5.3:46464616-46464635 | MS.gene99939:intron | 50.0% |
| ! | GCGGAGGTGTAATCTGGATT+TGG | - | chr5.3:46462164-46462183 | None:intergenic | 50.0% |
| ! | GTGCTGCTGGAAATTCAGAG+GGG | - | chr5.3:46463684-46463703 | None:intergenic | 50.0% |
| ! | TTTTCTCAAGTGAGGCCACG+AGG | + | chr5.3:46463560-46463579 | MS.gene99939:intron | 50.0% |
| !! | AATGATGGGTACGGTCCCAA+CGG | + | chr5.3:46466377-46466396 | MS.gene99939:intron | 50.0% |
| !! | AGGTGCTGCTGGAAATTCAG+AGG | - | chr5.3:46463686-46463705 | None:intergenic | 50.0% |
| !! | GAGGAAGTTGGTGGATTTGG+TGG | + | chr5.3:46462524-46462543 | MS.gene99939:CDS | 50.0% |
| !! | GGGAGGCATTTAGCTAACTC+GGG | + | chr5.3:46466222-46466241 | MS.gene99939:intron | 50.0% |
| !! | GGTCAGTCAACTTGAGTTGG+CGG | - | chr5.3:46466469-46466488 | None:intergenic | 50.0% |
| !! | GGTGCTGCTGGAAATTCAGA+GGG | - | chr5.3:46463685-46463704 | None:intergenic | 50.0% |
| !! | GTCAGTCAACTTGAGTTGGC+GGG | - | chr5.3:46466468-46466487 | None:intergenic | 50.0% |
| !! | TGATTGAACGAAGGTGCTGC+TGG | - | chr5.3:46463697-46463716 | None:intergenic | 50.0% |
| !! | TGGGCTAAAACGGTTCGGTT+GGG | - | chr5.3:46466417-46466436 | None:intergenic | 50.0% |
| !! | TTGGGCTAAAACGGTTCGGT+TGG | - | chr5.3:46466418-46466437 | None:intergenic | 50.0% |
| AAACCAGCTTCTGCCTCCGA+AGG | - | chr5.3:46463205-46463224 | None:intergenic | 55.0% | |
| AAGCAGGCTATAGCCTCAGC+TGG | + | chr5.3:46467562-46467581 | MS.gene99939:CDS | 55.0% | |
| AGACATCAAGAGGGTGGCAG+TGG | - | chr5.3:46466772-46466791 | None:intergenic | 55.0% | |
| AGCAGGGACAGAGTCGAGAT+GGG | - | chr5.3:46462324-46462343 | None:intergenic | 55.0% | |
| AGGAGGATGGAAGGGAGAGA+AGG | - | chr5.3:46462296-46462315 | None:intergenic | 55.0% | |
| AGGAGGCTGGACAGTGACAT+GGG | - | chr5.3:46465198-46465217 | None:intergenic | 55.0% | |
| CTGGACAGTGACATGGGTCA+TGG | - | chr5.3:46465192-46465211 | None:intergenic | 55.0% | |
| GATGGAAGGGAGAGAAGGGT+GGG | - | chr5.3:46462291-46462310 | None:intergenic | 55.0% | |
| GCAGTTGTTTGCGGAGTCTG+AGG | + | chr5.3:46462550-46462569 | MS.gene99939:CDS | 55.0% | |
| GCATAACCTGCCCAACTCGT+GGG | + | chr5.3:46466151-46466170 | MS.gene99939:intron | 55.0% | |
| GCTGAAGGGAAGGGGAGAAA+AGG | + | chr5.3:46465787-46465806 | MS.gene99939:intron | 55.0% | |
| GGAGGATGGAAGGGAGAGAA+GGG | - | chr5.3:46462295-46462314 | None:intergenic | 55.0% | |
| GGCTGGGCAACATTACCTAC+CGG | - | chr5.3:46466525-46466544 | None:intergenic | 55.0% | |
| GGGAAGGGGAGAAAAGGTTG+TGG | + | chr5.3:46465793-46465812 | MS.gene99939:intron | 55.0% | |
| GGTCAGAAAAGCAGAGTCGG+TGG | - | chr5.3:46466751-46466770 | None:intergenic | 55.0% | |
| GGTGAGGTAGGAAATAGCGG+AGG | - | chr5.3:46462180-46462199 | None:intergenic | 55.0% | |
| GGTGTGCGGTGTTTATGCGA+AGG | - | chr5.3:46462142-46462161 | None:intergenic | 55.0% | |
| GTCCCTGATGAGGAAGTTGG+TGG | + | chr5.3:46462515-46462534 | MS.gene99939:CDS | 55.0% | |
| TACAATCTCGAGCCATGCCC+CGG | - | chr5.3:46462698-46462717 | None:intergenic | 55.0% | |
| TGCATAACCTGCCCAACTCG+TGG | + | chr5.3:46466150-46466169 | MS.gene99939:intron | 55.0% | |
| ! | AGGGATGGAGTTGGATTGGG+AGG | - | chr5.3:46462201-46462220 | None:intergenic | 55.0% |
| ! | ATTTCACCCACGAGTTGGGC+AGG | - | chr5.3:46466160-46466179 | None:intergenic | 55.0% |
| ! | GCTCTGGTTTGACACTGTCC+TGG | + | chr5.3:46464084-46464103 | MS.gene99939:intron | 55.0% |
| ! | GTTCGGTTGGGTGGTTTTCC+GGG | - | chr5.3:46466405-46466424 | None:intergenic | 55.0% |
| ! | GTTGGATTGGGAGGTGAGGT+AGG | - | chr5.3:46462192-46462211 | None:intergenic | 55.0% |
| ! | TGGAGTTGGATTGGGAGGTG+AGG | - | chr5.3:46462196-46462215 | None:intergenic | 55.0% |
| ! | TTCGGTTGGGTGGTTTTCCG+GGG | - | chr5.3:46466404-46466423 | None:intergenic | 55.0% |
| !! | ATGATGGGTACGGTCCCAAC+GGG | + | chr5.3:46466378-46466397 | MS.gene99939:intron | 55.0% |
| !! | CTAAGGATGGGCATCGGTTC+AGG | + | chr5.3:46466120-46466139 | MS.gene99939:intron | 55.0% |
| !! | GCTAAAACGGTTCGGTTGGG+TGG | - | chr5.3:46466414-46466433 | None:intergenic | 55.0% |
| !! | GGTTCGGTTGGGTGGTTTTC+CGG | - | chr5.3:46466406-46466425 | None:intergenic | 55.0% |
| !! | TGGGAAGGCGTTGAATTCCG+AGG | + | chr5.3:46462802-46462821 | MS.gene99939:CDS | 55.0% |
| !!! | GGGTTTTGTTCCGGTTCGGA+CGG | + | chr5.3:46462478-46462497 | MS.gene99939:CDS | 55.0% |
| ATAGACAGGCCCACACACCC+TGG | - | chr5.3:46466318-46466337 | None:intergenic | 60.0% | |
| CAACCTTCGGAGGCAGAAGC+TGG | + | chr5.3:46463199-46463218 | MS.gene99939:CDS | 60.0% | |
| CAGAGAGGAAGGAGGGAGAG+AGG | + | chr5.3:46464476-46464495 | MS.gene99939:intron | 60.0% | |
| CAGCAGGGACAGAGTCGAGA+TGG | - | chr5.3:46462325-46462344 | None:intergenic | 60.0% | |
| CAGGAGGCTGGACAGTGACA+TGG | - | chr5.3:46465199-46465218 | None:intergenic | 60.0% | |
| GCTTGGAAGCAACAGGAGGC+TGG | - | chr5.3:46465211-46465230 | None:intergenic | 60.0% | |
| GGATGGAAGGGAGAGAAGGG+TGG | - | chr5.3:46462292-46462311 | None:intergenic | 60.0% | |
| GTGCACCACGGGCGAAGATA+AGG | - | chr5.3:46462400-46462419 | None:intergenic | 60.0% | |
| TAGACAGGCCCACACACCCT+GGG | - | chr5.3:46466317-46466336 | None:intergenic | 60.0% | |
| TATCTTCGCCCGTGGTGCAC+AGG | + | chr5.3:46462400-46462419 | MS.gene99939:CDS | 60.0% | |
| TTTGGGCAGTGAAGCGTGGC+TGG | + | chr5.3:46465765-46465784 | MS.gene99939:intron | 60.0% | |
| ! | AGTGAAGCGTGGCTGGCTGA+AGG | + | chr5.3:46465772-46465791 | MS.gene99939:intron | 60.0% |
| ! | GTGAAGCGTGGCTGGCTGAA+GGG | + | chr5.3:46465773-46465792 | MS.gene99939:intron | 60.0% |
| AAGGCCGTCCGCATCGCGAA+CGG | - | chr5.3:46462381-46462400 | None:intergenic | 65.0% | |
| ACCGGACCCACCTTACCTGC+AGG | - | chr5.3:46466507-46466526 | None:intergenic | 65.0% | |
| CCCTGCAGGTAAGGTGGGTC+CGG | + | chr5.3:46466503-46466522 | MS.gene99939:intron | 65.0% | |
| CCGGACCCACCTTACCTGCA+GGG | - | chr5.3:46466506-46466525 | None:intergenic | 65.0% | |
| CGGACCCACCTTACCTGCAG+GGG | - | chr5.3:46466505-46466524 | None:intergenic | 65.0% | |
| CTTCTCCGCCGTTCGCGATG+CGG | + | chr5.3:46462370-46462389 | MS.gene99939:CDS | 65.0% | |
| GAACGGCGGAGAAGGGAGGA+TGG | - | chr5.3:46462364-46462383 | None:intergenic | 65.0% | |
| GCAGGTAAGGTGGGTCCGGT+AGG | + | chr5.3:46466507-46466526 | MS.gene99939:intron | 65.0% | |
| GCATCGCGAACGGCGGAGAA+GGG | - | chr5.3:46462371-46462390 | None:intergenic | 65.0% | |
| ! | AGCGTGGCTGGCTGAAGGGA+AGG | + | chr5.3:46465777-46465796 | MS.gene99939:intron | 65.0% |
| ! | CGTGGCTGGCTGAAGGGAAG+GGG | + | chr5.3:46465779-46465798 | MS.gene99939:intron | 65.0% |
| ! | GACGGCCTTATCTTCGCCCG+TGG | + | chr5.3:46462392-46462411 | MS.gene99939:CDS | 65.0% |
| ! | GCGTGGCTGGCTGAAGGGAA+GGG | + | chr5.3:46465778-46465797 | MS.gene99939:intron | 65.0% |
| ! | GTGGTTTTCCGGGGCCCGTT+GGG | - | chr5.3:46466395-46466414 | None:intergenic | 65.0% |
| CGCATCGCGAACGGCGGAGA+AGG | - | chr5.3:46462372-46462391 | None:intergenic | 70.0% | |
| GCGAAAGGGCAACCGGGGCA+TGG | + | chr5.3:46462683-46462702 | MS.gene99939:CDS | 70.0% | |
| GGGAGAGAAGGGTGGGACCC+AGG | - | chr5.3:46462284-46462303 | None:intergenic | 70.0% | |
| TCCGCCGTTCGCGATGCGGA+CGG | + | chr5.3:46462374-46462393 | MS.gene99939:CDS | 70.0% | |
| TCGCGAACGGCGGAGAAGGG+AGG | - | chr5.3:46462368-46462387 | None:intergenic | 70.0% | |
| ! | GGTGGTTTTCCGGGGCCCGT+TGG | - | chr5.3:46466396-46466415 | None:intergenic | 70.0% |
| GCCGTCCGCATCGCGAACGG+CGG | - | chr5.3:46462378-46462397 | None:intergenic | 75.0% | |
| GGTACGGTCCCAACGGGCCC+CGG | + | chr5.3:46466384-46466403 | MS.gene99939:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 46462008 | 46467910 | 46462008 | ID=MS.gene99939 |
| chr5.3 | mRNA | 46462008 | 46467910 | 46462008 | ID=MS.gene99939.t1;Parent=MS.gene99939 |
| chr5.3 | exon | 46462008 | 46462874 | 46462008 | ID=MS.gene99939.t1.exon1;Parent=MS.gene99939.t1 |
| chr5.3 | CDS | 46462008 | 46462874 | 46462008 | ID=cds.MS.gene99939.t1;Parent=MS.gene99939.t1 |
| chr5.3 | exon | 46463181 | 46463318 | 46463181 | ID=MS.gene99939.t1.exon2;Parent=MS.gene99939.t1 |
| chr5.3 | CDS | 46463181 | 46463318 | 46463181 | ID=cds.MS.gene99939.t1;Parent=MS.gene99939.t1 |
| chr5.3 | exon | 46467475 | 46467714 | 46467475 | ID=MS.gene99939.t1.exon3;Parent=MS.gene99939.t1 |
| chr5.3 | CDS | 46467475 | 46467714 | 46467475 | ID=cds.MS.gene99939.t1;Parent=MS.gene99939.t1 |
| chr5.3 | exon | 46467821 | 46467910 | 46467821 | ID=MS.gene99939.t1.exon4;Parent=MS.gene99939.t1 |
| chr5.3 | CDS | 46467821 | 46467910 | 46467821 | ID=cds.MS.gene99939.t1;Parent=MS.gene99939.t1 |
| Gene Sequence |
| Protein sequence |
