Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026526.t1 | XP_013466579.1 | 95.2 | 310 | 15 | 0 | 1 | 310 | 1 | 310 | 5.00E-172 | 613.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026526.t1 | F4IAT8 | 67.1 | 298 | 98 | 0 | 9 | 306 | 26 | 323 | 1.1e-114 | 414.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026526.t1 | A0A072VG88 | 95.2 | 310 | 15 | 0 | 1 | 310 | 1 | 310 | 3.6e-172 | 613.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene002653 | MS.gene026526 | PPI |
| MS.gene98976 | MS.gene026526 | PPI |
| MS.gene063405 | MS.gene026526 | PPI |
| MS.gene026526 | MS.gene002655 | PPI |
| MS.gene026526 | MS.gene25182 | PPI |
| MS.gene83064 | MS.gene026526 | PPI |
| MS.gene039144 | MS.gene026526 | PPI |
| MS.gene026526 | MS.gene004332 | PPI |
| MS.gene026526 | MS.gene83064 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026526.t1 | MTR_1g032430 | 95.161 | 310 | 15 | 0 | 1 | 310 | 1 | 310 | 0.0 | 614 |
| MS.gene026526.t1 | MTR_1g032430 | 93.722 | 223 | 14 | 0 | 1 | 223 | 1 | 223 | 1.18e-156 | 437 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026526.t1 | AT1G24793 | 67.114 | 298 | 98 | 0 | 9 | 306 | 26 | 323 | 1.07e-145 | 413 |
| MS.gene026526.t1 | AT1G25054 | 67.114 | 298 | 98 | 0 | 9 | 306 | 26 | 323 | 1.07e-145 | 413 |
| MS.gene026526.t1 | AT1G25145 | 67.114 | 298 | 98 | 0 | 9 | 306 | 26 | 323 | 1.07e-145 | 413 |
| MS.gene026526.t1 | AT1G25210 | 67.114 | 298 | 98 | 0 | 9 | 306 | 26 | 323 | 1.07e-145 | 413 |
| MS.gene026526.t1 | AT1G24793 | 62.719 | 228 | 85 | 0 | 9 | 236 | 26 | 253 | 7.66e-100 | 294 |
| MS.gene026526.t1 | AT1G25210 | 62.719 | 228 | 85 | 0 | 9 | 236 | 26 | 253 | 7.66e-100 | 294 |
Find 93 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTGCATTGGAAGGTTC+TGG | 0.118604 | 1.1:+17410279 | MS.gene026526:CDS |
| TAGGATTCAGATTGAAAATT+TGG | 0.152736 | 1.1:+17410314 | MS.gene026526:CDS |
| CTCATAAATGCAGAAGGTTC+TGG | 0.297545 | 1.1:-17413074 | None:intergenic |
| AAGGAAGGTGGTTTGAGTTT+AGG | 0.298029 | 1.1:+17410157 | MS.gene026526:CDS |
| AAGGGAATCTCATTGCATTC+AGG | 0.317954 | 1.1:+17410093 | MS.gene026526:CDS |
| CCATGCATTACATCTTGATT+TGG | 0.320373 | 1.1:+17414639 | MS.gene026526:CDS |
| CTCTCGTTGTTTGCTCAGTT+TGG | 0.324134 | 1.1:+17414426 | MS.gene026526:CDS |
| GTTTGAGTTTAGGAACAATT+TGG | 0.329929 | 1.1:+17410167 | MS.gene026526:CDS |
| TTTCTGCATTGGAAGGTTCT+GGG | 0.332481 | 1.1:+17410280 | MS.gene026526:CDS |
| GCACAGATTCCTATATTTGA+TGG | 0.344926 | 1.1:+17412107 | MS.gene026526:intron |
| GTAAAGATGGGGTGAGGATT+AGG | 0.358641 | 1.1:+17410241 | MS.gene026526:CDS |
| TGCTTCTGTTGAATTTGCTC+AGG | 0.378400 | 1.1:+17410194 | MS.gene026526:CDS |
| AACCACTGGCAGCCAATTGC+AGG | 0.384480 | 1.1:-17413001 | None:intergenic |
| TTTGCCGACCCATCAAATAT+AGG | 0.387913 | 1.1:-17412116 | None:intergenic |
| AGATTGTGTCCTGGATTTGC+AGG | 0.390889 | 1.1:+17410132 | MS.gene026526:CDS |
| TGTACTACTTTGTGTAAAGA+TGG | 0.393389 | 1.1:+17410228 | MS.gene026526:CDS |
| GAAGTGGTTGGAGTAACTTA+TGG | 0.399861 | 1.1:+17412281 | MS.gene026526:CDS |
| GGAGCATTTGCTTTCTGCAT+TGG | 0.417815 | 1.1:+17410269 | MS.gene026526:CDS |
| TTTGCTCAGTTTGGTAATCA+AGG | 0.423753 | 1.1:+17414435 | MS.gene026526:CDS |
| GTTCTGGGGTTGATAATTGT+AGG | 0.431213 | 1.1:+17410295 | MS.gene026526:CDS |
| GAGATAGCAACTGATGTTGA+TGG | 0.431683 | 1.1:+17412173 | MS.gene026526:CDS |
| TGATGGGTCGGCAAAGGAAT+GGG | 0.445390 | 1.1:+17412124 | MS.gene026526:CDS |
| CATTTGCTTTCTGCATTGGA+AGG | 0.456709 | 1.1:+17410273 | MS.gene026526:CDS |
| GAATAAAACAAATCATCAAA+GGG | 0.457717 | 1.1:-17413034 | None:intergenic |
| ATTGAAAATTTGGATGATCA+AGG | 0.461008 | 1.1:+17410324 | MS.gene026526:CDS |
| CAGAACCTTCTGCATTTATG+AGG | 0.462949 | 1.1:+17413075 | MS.gene026526:CDS |
| TGAATGAACCGGTACATGTC+TGG | 0.469864 | 1.1:+17412225 | MS.gene026526:CDS |
| AAAGGAATGGGTGGCAGCCT+TGG | 0.472515 | 1.1:+17412136 | MS.gene026526:CDS |
| GCATTTCCTTCAGAAGTGGT+TGG | 0.486987 | 1.1:+17412269 | MS.gene026526:CDS |
| CACAGATTCCTATATTTGAT+GGG | 0.490495 | 1.1:+17412108 | MS.gene026526:intron |
| GTACTACTTTGTGTAAAGAT+GGG | 0.493098 | 1.1:+17410229 | MS.gene026526:CDS |
| TTTGCAGTGCTAGTAAAGGT+TGG | 0.495767 | 1.1:+17414337 | MS.gene026526:intron |
| TGATTTGGCACGCCGACTGA+TGG | 0.500609 | 1.1:+17414654 | MS.gene026526:CDS |
| CTTCCTTGACCTGCAAATCC+AGG | 0.503251 | 1.1:-17410141 | None:intergenic |
| AGCTCCACATGTGAATGAAC+CGG | 0.504944 | 1.1:+17412214 | MS.gene026526:CDS |
| CAAAATGCTGGACTTATCAA+AGG | 0.505054 | 1.1:+17413550 | MS.gene026526:CDS |
| TAGAAAATGCCATTGTGTGC+AGG | 0.508226 | 1.1:+17413581 | MS.gene026526:CDS |
| GGCACACATAGTAGCTTACA+AGG | 0.509534 | 1.1:+17414467 | MS.gene026526:CDS |
| GGAATAAAACAAATCATCAA+AGG | 0.512563 | 1.1:-17413035 | None:intergenic |
| AAAATGCTGGACTTATCAAA+GGG | 0.513412 | 1.1:+17413551 | MS.gene026526:CDS |
| AGGGAATCTCATTGCATTCA+GGG | 0.513825 | 1.1:+17410094 | MS.gene026526:CDS |
| TAAGCTACTATGTGTGCCAC+TGG | 0.514194 | 1.1:-17414462 | None:intergenic |
| TTGATGGGTCGGCAAAGGAA+TGG | 0.521630 | 1.1:+17412123 | MS.gene026526:CDS |
| GTTGAGCAAATGCAAAATGC+TGG | 0.524487 | 1.1:+17413538 | MS.gene026526:CDS |
| TTCTGCATTGGAAGGTTCTG+GGG | 0.524504 | 1.1:+17410281 | MS.gene026526:CDS |
| CACCTGCAATTGGCTGCCAG+TGG | 0.526884 | 1.1:+17412999 | MS.gene026526:CDS |
| GTGGCAGCCTTGGAAGAAGT+TGG | 0.528078 | 1.1:+17412146 | MS.gene026526:CDS |
| TTCACGTCATTCCCATCAGT+CGG | 0.529002 | 1.1:-17414666 | None:intergenic |
| AAGCTTCAACAAACTCTAAG+AGG | 0.529912 | 1.1:+17410057 | MS.gene026526:CDS |
| TCATTCTTCCAGACATGTAC+CGG | 0.531523 | 1.1:-17412233 | None:intergenic |
| ACAAACTCTAAGAGGAATTG+TGG | 0.537569 | 1.1:+17410065 | MS.gene026526:CDS |
| AACCTTCTGCATTTATGAGG+AGG | 0.537629 | 1.1:+17413078 | MS.gene026526:CDS |
| GATTTGGCACGCCGACTGAT+GGG | 0.537673 | 1.1:+17414655 | MS.gene026526:CDS |
| AAGAGGAATTGTGGAGCGGA+AGG | 0.538994 | 1.1:+17410074 | MS.gene026526:CDS |
| GATTCCTATATTTGATGGGT+CGG | 0.540403 | 1.1:+17412112 | MS.gene026526:intron |
| TGCTGCATTTCCTTCAGAAG+TGG | 0.547547 | 1.1:+17412265 | MS.gene026526:CDS |
| TATATTTGATGGGTCGGCAA+AGG | 0.549892 | 1.1:+17412118 | MS.gene026526:CDS |
| TCTAAAATCTTGTGACGGCA+TGG | 0.551674 | 1.1:-17414390 | None:intergenic |
| CTCTAAACCAACTTCTTCCA+AGG | 0.554837 | 1.1:-17412153 | None:intergenic |
| TGAGCAAATTCAACAGAAGC+AGG | 0.556051 | 1.1:-17410192 | None:intergenic |
| AACCTCCTCATAAATGCAGA+AGG | 0.557709 | 1.1:-17413080 | None:intergenic |
| TGTCCTGGATTTGCAGGTCA+AGG | 0.566608 | 1.1:+17410138 | MS.gene026526:CDS |
| GATCATCAAAACTCGTCACA+TGG | 0.570839 | 1.1:+17409933 | MS.gene026526:CDS |
| CTTTGTGTAAAGATGGGGTG+AGG | 0.573979 | 1.1:+17410235 | MS.gene026526:CDS |
| AGATAGCAACTGATGTTGAT+GGG | 0.574913 | 1.1:+17412174 | MS.gene026526:CDS |
| CTGGATTTGCAGGTCAAGGA+AGG | 0.576111 | 1.1:+17410142 | MS.gene026526:CDS |
| AATAAAACAAATCATCAAAG+GGG | 0.576399 | 1.1:-17413033 | None:intergenic |
| GTTACTCCAACCACTTCTGA+AGG | 0.580389 | 1.1:-17412275 | None:intergenic |
| TTATGGCATAAACTTTCCAC+AGG | 0.581378 | 1.1:+17412298 | MS.gene026526:CDS |
| GATTTGCAGGTCAAGGAAGG+TGG | 0.585501 | 1.1:+17410145 | MS.gene026526:CDS |
| TCTGGACAAAGCTATTTGCA+TGG | 0.591663 | 1.1:-17413056 | None:intergenic |
| CCAAATCAAGATGTAATGCA+TGG | 0.608554 | 1.1:-17414639 | None:intergenic |
| TCGACGGTGAGATTGTGTCC+TGG | 0.609644 | 1.1:+17410123 | MS.gene026526:CDS |
| TACTACTTTGTGTAAAGATG+GGG | 0.616242 | 1.1:+17410230 | MS.gene026526:CDS |
| AATCTCATTGCATTCAGGGA+AGG | 0.631923 | 1.1:+17410098 | MS.gene026526:CDS |
| AGAGGAATTGTGGAGCGGAA+GGG | 0.632291 | 1.1:+17410075 | MS.gene026526:CDS |
| TAAGATCTAAAATCTTGTGA+CGG | 0.636444 | 1.1:-17414395 | None:intergenic |
| TGGGGTGAGGATTAGGACTG+TGG | 0.642809 | 1.1:+17410248 | MS.gene026526:CDS |
| TCATCACTGAAACGAAGAGG+TGG | 0.642947 | 1.1:-17414366 | None:intergenic |
| CTCTAAGAGGAATTGTGGAG+CGG | 0.643430 | 1.1:+17410070 | MS.gene026526:CDS |
| AAGCTACTATGTGTGCCACT+GGG | 0.645381 | 1.1:-17414461 | None:intergenic |
| GCATTCAGGGAAGGTATCGA+CGG | 0.657142 | 1.1:+17410107 | MS.gene026526:CDS |
| ATAAAACAAATCATCAAAGG+GGG | 0.664116 | 1.1:-17413032 | None:intergenic |
| AAGCAAATACCTGCACACAA+TGG | 0.670930 | 1.1:-17413590 | None:intergenic |
| GGTTCATCACTGAAACGAAG+AGG | 0.683820 | 1.1:-17414369 | None:intergenic |
| TGGGTCGGCAAAGGAATGGG+TGG | 0.687827 | 1.1:+17412127 | MS.gene026526:CDS |
| TTGATGATCTGAGAGCTCTG+AGG | 0.702075 | 1.1:-17409919 | None:intergenic |
| AATGCTGGACTTATCAAAGG+GGG | 0.702132 | 1.1:+17413553 | MS.gene026526:CDS |
| TGATCAAGGTGATGATGCCG+AGG | 0.707861 | 1.1:+17410338 | MS.gene026526:CDS |
| TGTACCGGTTCATTCACATG+TGG | 0.732995 | 1.1:-17412218 | None:intergenic |
| AAATGCTGGACTTATCAAAG+GGG | 0.734053 | 1.1:+17413552 | MS.gene026526:CDS |
| TGGTAATCAAGGACTCCCAG+TGG | 0.735252 | 1.1:+17414446 | MS.gene026526:CDS |
| TTACACAAAGTAGTACAAAG+CGG | 0.761682 | 1.1:-17410222 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAATAAATACAAACT+TGG | + | chr1.1:17411222-17411241 | MS.gene026526:intron | 10.0% |
| !!! | AATAAATCGAATTTTAATTA+AGG | + | chr1.1:17411113-17411132 | MS.gene026526:intron | 10.0% |
| !!! | AATAAATCGAATTTTAATTA+AGG | - | chr1.1:17411132-17411113 | None:intergenic | 10.0% |
| !!! | AATTAAAATTCGATTTATTT+TGG | + | chr1.1:17410857-17410876 | MS.gene026526:intron | 10.0% |
| !!! | AATTAAAATTCGATTTATTT+TGG | - | chr1.1:17410876-17410857 | None:intergenic | 10.0% |
| !!! | ATAAATCGAATTTTAATTAA+GGG | + | chr1.1:17411114-17411133 | MS.gene026526:intron | 10.0% |
| !!! | ATAAATCGAATTTTAATTAA+GGG | - | chr1.1:17411133-17411114 | None:intergenic | 10.0% |
| !! | AAATCAAAATACATAGTAAA+AGG | - | chr1.1:17414513-17414532 | None:intergenic | 15.0% |
| !! | AAGGAAAATAAAAAAGAAAT+CGG | + | chr1.1:17412740-17412759 | MS.gene026526:intron | 15.0% |
| !! | AGAATGTAATGTATTAATAT+GGG | + | chr1.1:17410445-17410464 | MS.gene026526:intron | 15.0% |
| !! | ATGGCAAAAAAAATTAATTA+AGG | - | chr1.1:17412039-17412058 | None:intergenic | 15.0% |
| !! | TAGAATGTAATGTATTAATA+TGG | + | chr1.1:17410444-17410463 | MS.gene026526:intron | 15.0% |
| !!! | AAATGTTAGTATTAGTTTTT+AGG | - | chr1.1:17411189-17411208 | None:intergenic | 15.0% |
| !!! | AGTTTATTTAGAACTTATTT+GGG | - | chr1.1:17411915-17411934 | None:intergenic | 15.0% |
| !!! | ATTTCTTTTTTATTTTCCTT+TGG | - | chr1.1:17412740-17412759 | None:intergenic | 15.0% |
| !! | AATAAAACAAATCATCAAAG+GGG | - | chr1.1:17413036-17413055 | None:intergenic | 20.0% |
| !! | ACTTAATACTAATTCTTCAT+GGG | + | chr1.1:17412557-17412576 | MS.gene026526:intron | 20.0% |
| !! | AGTACATGGAAATATTTAAA+TGG | - | chr1.1:17412390-17412409 | None:intergenic | 20.0% |
| !! | ATTATAATAAATGTCCAGTA+AGG | - | chr1.1:17412436-17412455 | None:intergenic | 20.0% |
| !! | ATTTCAAGAACTAAATGTAA+GGG | - | chr1.1:17412062-17412081 | None:intergenic | 20.0% |
| !! | CTTTATACATAGAGAATATA+AGG | + | chr1.1:17410692-17410711 | MS.gene026526:intron | 20.0% |
| !! | GAATAAAACAAATCATCAAA+GGG | - | chr1.1:17413037-17413056 | None:intergenic | 20.0% |
| !! | TACTTAATACTAATTCTTCA+TGG | + | chr1.1:17412556-17412575 | MS.gene026526:intron | 20.0% |
| !! | TATTTCAAGAACTAAATGTA+AGG | - | chr1.1:17412063-17412082 | None:intergenic | 20.0% |
| !! | TGGGTTTATTAATTATATCA+TGG | - | chr1.1:17411896-17411915 | None:intergenic | 20.0% |
| !! | TTGAATTAAAACTAACAGAA+AGG | + | chr1.1:17411054-17411073 | MS.gene026526:intron | 20.0% |
| !!! | AATCAAGATTTTTCTATTAC+TGG | + | chr1.1:17414013-17414032 | MS.gene026526:intron | 20.0% |
| !!! | AGTTTTAATTCAAAAACGTT+AGG | + | chr1.1:17410922-17410941 | MS.gene026526:intron | 20.0% |
| !!! | AGTTTTAATTCAAAAACGTT+AGG | - | chr1.1:17410941-17410922 | None:intergenic | 20.0% |
| !!! | ATATTTTACAAGTCTTTCAA+AGG | + | chr1.1:17412527-17412546 | MS.gene026526:intron | 20.0% |
| !!! | GAGTTTATTTAGAACTTATT+TGG | - | chr1.1:17411916-17411935 | None:intergenic | 20.0% |
| !!! | TGATCTTTTATTTGAGATTA+AGG | - | chr1.1:17413987-17414006 | None:intergenic | 20.0% |
| !!! | TGTTTTTACCTAATTTTCTA+AGG | + | chr1.1:17412494-17412513 | MS.gene026526:intron | 20.0% |
| ! | AAATCAAGATGTGCATATTT+CGG | - | chr1.1:17411727-17411746 | None:intergenic | 25.0% |
| ! | AATAAGTGGAAAACAACATA+TGG | - | chr1.1:17410633-17410652 | None:intergenic | 25.0% |
| ! | AGAATAAGTGTTTATAAGTG+GGG | + | chr1.1:17411286-17411305 | MS.gene026526:intron | 25.0% |
| ! | AGATGACAATCAATCATATA+AGG | - | chr1.1:17413414-17413433 | None:intergenic | 25.0% |
| ! | ATAAAACAAATCATCAAAGG+GGG | - | chr1.1:17413035-17413054 | None:intergenic | 25.0% |
| ! | ATACTATAACAAACCATGTT+TGG | - | chr1.1:17412769-17412788 | None:intergenic | 25.0% |
| ! | ATGATATGAAGATGAAAAAG+AGG | + | chr1.1:17411003-17411022 | MS.gene026526:intron | 25.0% |
| ! | ATTACTGTCAGTTATCTATT+TGG | - | chr1.1:17413268-17413287 | None:intergenic | 25.0% |
| ! | ATTGAAAATTTGGATGATCA+AGG | + | chr1.1:17410324-17410343 | MS.gene026526:CDS | 25.0% |
| ! | CAGAATAAGTGTTTATAAGT+GGG | + | chr1.1:17411285-17411304 | MS.gene026526:intron | 25.0% |
| ! | CTCAACTTAACTGAAAATTT+GGG | - | chr1.1:17413306-17413325 | None:intergenic | 25.0% |
| ! | GAAATTAGGTACATAAATCT+AGG | + | chr1.1:17413797-17413816 | MS.gene026526:intron | 25.0% |
| ! | GATACTACCTAAATAGTTAA+GGG | + | chr1.1:17411145-17411164 | MS.gene026526:intron | 25.0% |
| ! | GATACTACCTAAATAGTTAA+GGG | - | chr1.1:17411164-17411145 | None:intergenic | 25.0% |
| ! | GATGACAATCAATCATATAA+GGG | - | chr1.1:17413413-17413432 | None:intergenic | 25.0% |
| ! | GATTTATGTACCTAATTTCA+TGG | - | chr1.1:17413796-17413815 | None:intergenic | 25.0% |
| ! | GGAATAAAACAAATCATCAA+AGG | - | chr1.1:17413038-17413057 | None:intergenic | 25.0% |
| ! | TAGGATTCAGATTGAAAATT+TGG | + | chr1.1:17410314-17410333 | MS.gene026526:CDS | 25.0% |
| ! | TCAAAATACATAGTAAAAGG+AGG | - | chr1.1:17414510-17414529 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCGATATAAAC+AGG | - | chr1.1:17410471-17410490 | None:intergenic | 25.0% |
| ! | TCTCAACTTAACTGAAAATT+TGG | - | chr1.1:17413307-17413326 | None:intergenic | 25.0% |
| ! | TTCTAAATAAACTCTTCCAA+AGG | + | chr1.1:17411922-17411941 | MS.gene026526:intron | 25.0% |
| !! | AAATTTGAAATGAAGCAAAC+AGG | - | chr1.1:17409986-17410005 | None:intergenic | 25.0% |
| !! | AACTTCATGCATGAAATTTT+GGG | - | chr1.1:17413737-17413756 | None:intergenic | 25.0% |
| !! | AATTTGAAATGAAGCAAACA+GGG | - | chr1.1:17409985-17410004 | None:intergenic | 25.0% |
| !! | ACTTTTCTAAGTTTCTAAGT+AGG | - | chr1.1:17411569-17411588 | None:intergenic | 25.0% |
| !! | CACAAGATTTTAGATCTTAT+CGG | + | chr1.1:17414399-17414418 | MS.gene026526:CDS | 25.0% |
| !! | TAACTTCATGCATGAAATTT+TGG | - | chr1.1:17413738-17413757 | None:intergenic | 25.0% |
| !! | TAAGATCTAAAATCTTGTGA+CGG | - | chr1.1:17414398-17414417 | None:intergenic | 25.0% |
| !! | TCAAAATCTTTTGTATAGCA+AGG | + | chr1.1:17412902-17412921 | MS.gene026526:intron | 25.0% |
| !! | TTGTTTTCATATAGAGCTTA+TGG | - | chr1.1:17410657-17410676 | None:intergenic | 25.0% |
| !! | TTTAGGCTAAATTGCATTTT+TGG | - | chr1.1:17411172-17411191 | None:intergenic | 25.0% |
| !!! | ATTTTCTTCTGGAATTTTTC+TGG | + | chr1.1:17410953-17410972 | MS.gene026526:intron | 25.0% |
| !!! | CTGTTTTCAAGCTTATTTAA+TGG | + | chr1.1:17410565-17410584 | MS.gene026526:intron | 25.0% |
| !!! | GATACTCTTCTTTAATTTGT+AGG | + | chr1.1:17413516-17413535 | MS.gene026526:intron | 25.0% |
| !!! | TTTTCTTCTGGAATTTTTCT+GGG | + | chr1.1:17410954-17410973 | MS.gene026526:intron | 25.0% |
| AAAATGCTGGACTTATCAAA+GGG | + | chr1.1:17413551-17413570 | MS.gene026526:CDS | 30.0% | |
| AATGAAGGTCTGTATTTGAA+TGG | - | chr1.1:17414219-17414238 | None:intergenic | 30.0% | |
| ACTAAACTAGTAGATTCAAC+AGG | - | chr1.1:17413460-17413479 | None:intergenic | 30.0% | |
| AGACTGTTATAGATTGCTTA+CGG | + | chr1.1:17410518-17410537 | MS.gene026526:intron | 30.0% | |
| ATAGAGCTTATGGAAATAAG+TGG | - | chr1.1:17410647-17410666 | None:intergenic | 30.0% | |
| CACAGATTCCTATATTTGAT+GGG | + | chr1.1:17412108-17412127 | MS.gene026526:intron | 30.0% | |
| CATTTAACAACTTCTTACCT+CGG | - | chr1.1:17410358-17410377 | None:intergenic | 30.0% | |
| CCACTTATAAACACTTATTC+TGG | - | chr1.1:17411287-17411306 | None:intergenic | 30.0% | |
| CCAGAATAAGTGTTTATAAG+TGG | + | chr1.1:17411284-17411303 | MS.gene026526:intron | 30.0% | |
| CCTGAATAAGTGTTTATAGT+GGG | + | chr1.1:17411462-17411481 | MS.gene026526:intron | 30.0% | |
| CGATACTACCTAAATAGTTA+AGG | + | chr1.1:17411144-17411163 | MS.gene026526:intron | 30.0% | |
| CGATACTACCTAAATAGTTA+AGG | - | chr1.1:17411163-17411144 | None:intergenic | 30.0% | |
| CTGAATAAGTGTTTATAGTG+GGG | + | chr1.1:17411463-17411482 | MS.gene026526:intron | 30.0% | |
| GAATAAGTGTTTATAAGTGG+GGG | + | chr1.1:17411287-17411306 | MS.gene026526:intron | 30.0% | |
| GGCAATAAATAGACTACAAA+TGG | - | chr1.1:17413115-17413134 | None:intergenic | 30.0% | |
| GTACTACTTTGTGTAAAGAT+GGG | + | chr1.1:17410229-17410248 | MS.gene026526:CDS | 30.0% | |
| GTATCATAAGCTATCAAAAC+CGG | - | chr1.1:17413672-17413691 | None:intergenic | 30.0% | |
| TACTACTTTGTGTAAAGATG+GGG | + | chr1.1:17410230-17410249 | MS.gene026526:CDS | 30.0% | |
| TCTTTCAGCCTTAGAAAATT+AGG | - | chr1.1:17412505-17412524 | None:intergenic | 30.0% | |
| TGAATAAGTGTTTATAGTGG+GGG | + | chr1.1:17411464-17411483 | MS.gene026526:intron | 30.0% | |
| TGATTGATACAATTGCAGTT+AGG | - | chr1.1:17413387-17413406 | None:intergenic | 30.0% | |
| TGTACTACTTTGTGTAAAGA+TGG | + | chr1.1:17410228-17410247 | MS.gene026526:CDS | 30.0% | |
| TTAAAAATCATACTCGTCTC+AGG | - | chr1.1:17414587-17414606 | None:intergenic | 30.0% | |
| TTACACAAAGTAGTACAAAG+CGG | - | chr1.1:17410225-17410244 | None:intergenic | 30.0% | |
| ! | ACTAGGCTAAATTGCATTTT+TGG | + | chr1.1:17410797-17410816 | MS.gene026526:intron | 30.0% |
| ! | AGATAGCATTTGCAATTTTG+TGG | + | chr1.1:17412001-17412020 | MS.gene026526:intron | 30.0% |
| ! | AGGTTTTCTTCATTTTCTTC+TGG | + | chr1.1:17410942-17410961 | MS.gene026526:intron | 30.0% |
| ! | ATAAGATGTGAAGCATTTGA+TGG | + | chr1.1:17412934-17412953 | MS.gene026526:intron | 30.0% |
| ! | CAAATACACCTTTCTTTTAC+AGG | + | chr1.1:17412976-17412995 | MS.gene026526:intron | 30.0% |
| ! | GCATATTTCGGATATTTTGT+TGG | - | chr1.1:17411715-17411734 | None:intergenic | 30.0% |
| ! | GTGACTTTAATTTATGCATC+TGG | - | chr1.1:17413825-17413844 | None:intergenic | 30.0% |
| ! | GTTTGAGTTTAGGAACAATT+TGG | + | chr1.1:17410167-17410186 | MS.gene026526:CDS | 30.0% |
| ! | GTTTTGCACTAAATAACACA+TGG | - | chr1.1:17413150-17413169 | None:intergenic | 30.0% |
| ! | TAGTTTTTGCAACAGTACAA+TGG | - | chr1.1:17412700-17412719 | None:intergenic | 30.0% |
| ! | TGAAGAAAACAGAAAGTACA+TGG | - | chr1.1:17412404-17412423 | None:intergenic | 30.0% |
| ! | TTTTGGTCCCTTAACTATTT+AGG | + | chr1.1:17410814-17410833 | MS.gene026526:intron | 30.0% |
| ! | TTTTGGTCCCTTAACTATTT+AGG | - | chr1.1:17410833-17410814 | None:intergenic | 30.0% |
| !! | GAAAGTACCAAAATGTGTAA+TGG | - | chr1.1:17410898-17410917 | None:intergenic | 30.0% |
| !! | TGCAATTTAGCCTAGTTTTT+AGG | - | chr1.1:17410793-17410812 | None:intergenic | 30.0% |
| AAATGCTGGACTTATCAAAG+GGG | + | chr1.1:17413552-17413571 | MS.gene026526:CDS | 35.0% | |
| AAGAAATCGGAAACCAAACA+TGG | + | chr1.1:17412753-17412772 | MS.gene026526:intron | 35.0% | |
| AAGCTTACGTCCATGAAATT+AGG | + | chr1.1:17413783-17413802 | MS.gene026526:intron | 35.0% | |
| AAGCTTCAACAAACTCTAAG+AGG | + | chr1.1:17410057-17410076 | MS.gene026526:CDS | 35.0% | |
| AAGTCAAAAGAAAGAAACCC+AGG | - | chr1.1:17414151-17414170 | None:intergenic | 35.0% | |
| AGATAGCAACTGATGTTGAT+GGG | + | chr1.1:17412174-17412193 | MS.gene026526:CDS | 35.0% | |
| AGTATGGCACTATTTGTTTG+TGG | + | chr1.1:17413856-17413875 | MS.gene026526:intron | 35.0% | |
| ATACAAGTTGTACTCTCCTT+TGG | - | chr1.1:17411941-17411960 | None:intergenic | 35.0% | |
| CAAAATGCTGGACTTATCAA+AGG | + | chr1.1:17413550-17413569 | MS.gene026526:CDS | 35.0% | |
| CAAGAACTAAATGTAAGGGA+TGG | - | chr1.1:17412058-17412077 | None:intergenic | 35.0% | |
| CCAAATCAAGATGTAATGCA+TGG | - | chr1.1:17414642-17414661 | None:intergenic | 35.0% | |
| CCATGCATTACATCTTGATT+TGG | + | chr1.1:17414639-17414658 | MS.gene026526:CDS | 35.0% | |
| CCCACTATAAACACTTATTC+AGG | - | chr1.1:17411465-17411484 | None:intergenic | 35.0% | |
| CTATTTAGGTAGTATCGCTT+TGG | + | chr1.1:17410828-17410847 | MS.gene026526:intron | 35.0% | |
| CTATTTAGGTAGTATCGCTT+TGG | - | chr1.1:17410847-17410828 | None:intergenic | 35.0% | |
| GAAAGGACAGAAATGTGTAA+CGG | + | chr1.1:17411071-17411090 | MS.gene026526:intron | 35.0% | |
| GCACAGATTCCTATATTTGA+TGG | + | chr1.1:17412107-17412126 | MS.gene026526:intron | 35.0% | |
| GCCTGAATAAGTGTTTATAG+TGG | + | chr1.1:17411461-17411480 | MS.gene026526:intron | 35.0% | |
| GGAATCTGTGCAAGAAATTA+AGG | - | chr1.1:17412098-17412117 | None:intergenic | 35.0% | |
| GTATAAGAGAGAGTGAGTTA+CGG | - | chr1.1:17409963-17409982 | None:intergenic | 35.0% | |
| TAACACAACCTCTCAAAACT+GGG | - | chr1.1:17411322-17411341 | None:intergenic | 35.0% | |
| TATAAGAGAGAGTGAGTTAC+GGG | - | chr1.1:17409962-17409981 | None:intergenic | 35.0% | |
| TCGCTAAGTGAAATAAAGCA+AGG | - | chr1.1:17413239-17413258 | None:intergenic | 35.0% | |
| TGACTCTTACGATATATGCA+GGG | + | chr1.1:17414613-17414632 | MS.gene026526:intron | 35.0% | |
| TTAATCTCTGACGTAAGACA+TGG | + | chr1.1:17413920-17413939 | MS.gene026526:intron | 35.0% | |
| TTATGGCATAAACTTTCCAC+AGG | + | chr1.1:17412298-17412317 | MS.gene026526:CDS | 35.0% | |
| TTCAGATTTCAGTGTGCTAA+TGG | - | chr1.1:17414243-17414262 | None:intergenic | 35.0% | |
| TTCTCACTTAAAGCTACCAA+AGG | + | chr1.1:17412721-17412740 | MS.gene026526:intron | 35.0% | |
| TTGACTCTTACGATATATGC+AGG | + | chr1.1:17414612-17414631 | MS.gene026526:intron | 35.0% | |
| TTTGGTCCAAATATGACAAG+AGG | + | chr1.1:17411756-17411775 | MS.gene026526:intron | 35.0% | |
| ! | AAAGTGCCTCTTGTCATATT+TGG | - | chr1.1:17411765-17411784 | None:intergenic | 35.0% |
| ! | ACAAACTCTAAGAGGAATTG+TGG | + | chr1.1:17410065-17410084 | MS.gene026526:CDS | 35.0% |
| ! | ATGACTTGATGATTCAAGTG+GGG | + | chr1.1:17410715-17410734 | MS.gene026526:intron | 35.0% |
| ! | CATAGTAGCTTACAAGGTTT+TGG | + | chr1.1:17414473-17414492 | MS.gene026526:intron | 35.0% |
| ! | CTTCTCTCCATTACACATTT+TGG | + | chr1.1:17410888-17410907 | MS.gene026526:intron | 35.0% |
| ! | GAATAAGTGTTTATAGTGGG+GGG | + | chr1.1:17411465-17411484 | MS.gene026526:intron | 35.0% |
| ! | GATGACTTGATGATTCAAGT+GGG | + | chr1.1:17410714-17410733 | MS.gene026526:intron | 35.0% |
| ! | GATTCCTATATTTGATGGGT+CGG | + | chr1.1:17412112-17412131 | MS.gene026526:intron | 35.0% |
| ! | TAATGTGTCCATTTTGCGTA+TGG | + | chr1.1:17411601-17411620 | MS.gene026526:intron | 35.0% |
| ! | TCTTGATTTCTGCAAGGTTT+TGG | + | chr1.1:17411738-17411757 | MS.gene026526:intron | 35.0% |
| ! | TCTTTTGTACATGCAACAGT+TGG | + | chr1.1:17411640-17411659 | MS.gene026526:intron | 35.0% |
| ! | TGTGTAATGGAGAGAAGTTA+AGG | - | chr1.1:17410885-17410904 | None:intergenic | 35.0% |
| ! | TTCTTTTGCAGTGCTAGTAA+AGG | + | chr1.1:17414333-17414352 | MS.gene026526:intron | 35.0% |
| ! | TTTGCTCAGTTTGGTAATCA+AGG | + | chr1.1:17414435-17414454 | MS.gene026526:CDS | 35.0% |
| !! | AAAGCAAGGTTTTGTACATC+TGG | - | chr1.1:17413225-17413244 | None:intergenic | 35.0% |
| !! | TTCTTGTTGTTGAAGGTTGA+TGG | + | chr1.1:17410978-17410997 | MS.gene026526:intron | 35.0% |
| !!! | CTAGTTTTTAGGTTCAGAGT+GGG | - | chr1.1:17410782-17410801 | None:intergenic | 35.0% |
| !!! | TAGTTTTTAGGTTCAGAGTG+GGG | - | chr1.1:17410781-17410800 | None:intergenic | 35.0% |
| AACCTCCTCATAAATGCAGA+AGG | - | chr1.1:17413083-17413102 | None:intergenic | 40.0% | |
| AACCTTCTGCATTTATGAGG+AGG | + | chr1.1:17413078-17413097 | MS.gene026526:CDS | 40.0% | |
| AAGCAAATACCTGCACACAA+TGG | - | chr1.1:17413593-17413612 | None:intergenic | 40.0% | |
| AAGGGAATCTCATTGCATTC+AGG | + | chr1.1:17410093-17410112 | MS.gene026526:CDS | 40.0% | |
| AATCTCATTGCATTCAGGGA+AGG | + | chr1.1:17410098-17410117 | MS.gene026526:CDS | 40.0% | |
| AATGCTGGACTTATCAAAGG+GGG | + | chr1.1:17413553-17413572 | MS.gene026526:CDS | 40.0% | |
| ACAAATAGTGCCATACTTCG+AGG | - | chr1.1:17413853-17413872 | None:intergenic | 40.0% | |
| ACTCTTACGATATATGCAGG+GGG | + | chr1.1:17414615-17414634 | MS.gene026526:intron | 40.0% | |
| AGAGTTAGGCTAGAGTTAGT+TGG | + | chr1.1:17414093-17414112 | MS.gene026526:intron | 40.0% | |
| AGATGAGAGAGAGAAGAGTT+AGG | + | chr1.1:17414079-17414098 | MS.gene026526:intron | 40.0% | |
| AGGCAAGAACTAACAAGAGA+GGG | - | chr1.1:17413440-17413459 | None:intergenic | 40.0% | |
| AGGGAATCTCATTGCATTCA+GGG | + | chr1.1:17410094-17410113 | MS.gene026526:CDS | 40.0% | |
| AGTAAAAGGAGGAGAACCAA+AGG | - | chr1.1:17414499-17414518 | None:intergenic | 40.0% | |
| AGTCAAAGAGTGGAGTGATA+AGG | + | chr1.1:17410739-17410758 | MS.gene026526:intron | 40.0% | |
| AGTCTCACAAATGAGTACAC+TGG | - | chr1.1:17410503-17410522 | None:intergenic | 40.0% | |
| ATTCTGATGAAACAGAGCCT+GGG | - | chr1.1:17411979-17411998 | None:intergenic | 40.0% | |
| CACAAAGAGATCGTGAGAAT+GGG | - | chr1.1:17410028-17410047 | None:intergenic | 40.0% | |
| CAGAACCTTCTGCATTTATG+AGG | + | chr1.1:17413075-17413094 | MS.gene026526:CDS | 40.0% | |
| CAGTGTGCTAATGGAAATGA+AGG | - | chr1.1:17414234-17414253 | None:intergenic | 40.0% | |
| CATTTGCTTTCTGCATTGGA+AGG | + | chr1.1:17410273-17410292 | MS.gene026526:CDS | 40.0% | |
| CCACTCTGAACCTAAAAACT+AGG | + | chr1.1:17410780-17410799 | MS.gene026526:intron | 40.0% | |
| CCTTCAGAGCTGTAATCAAT+TGG | + | chr1.1:17413351-17413370 | MS.gene026526:intron | 40.0% | |
| CTAACACAACCTCTCAAAAC+TGG | - | chr1.1:17411323-17411342 | None:intergenic | 40.0% | |
| CTATCCTACAAGTGTGTTGA+CGG | - | chr1.1:17411534-17411553 | None:intergenic | 40.0% | |
| CTCATAAATGCAGAAGGTTC+TGG | - | chr1.1:17413077-17413096 | None:intergenic | 40.0% | |
| CTCTAAACCAACTTCTTCCA+AGG | - | chr1.1:17412156-17412175 | None:intergenic | 40.0% | |
| CTTACACAACCTCACAAAAC+CGG | - | chr1.1:17411509-17411528 | None:intergenic | 40.0% | |
| CTTCAACACACTATCCTTAC+TGG | + | chr1.1:17412419-17412438 | MS.gene026526:intron | 40.0% | |
| GAAGTGGTTGGAGTAACTTA+TGG | + | chr1.1:17412281-17412300 | MS.gene026526:CDS | 40.0% | |
| GACTCTTACGATATATGCAG+GGG | + | chr1.1:17414614-17414633 | MS.gene026526:intron | 40.0% | |
| GAGATAGCAACTGATGTTGA+TGG | + | chr1.1:17412173-17412192 | MS.gene026526:CDS | 40.0% | |
| GAGTTACAAACACATTCACG+TGG | - | chr1.1:17413191-17413210 | None:intergenic | 40.0% | |
| GAGTTAGGCTAGAGTTAGTT+GGG | + | chr1.1:17414094-17414113 | MS.gene026526:intron | 40.0% | |
| GATCATCAAAACTCGTCACA+TGG | + | chr1.1:17409933-17409952 | MS.gene026526:CDS | 40.0% | |
| GCATAAACTTTCCACAGGTA+AGG | + | chr1.1:17412303-17412322 | MS.gene026526:intron | 40.0% | |
| GTCACTATTTCCTCGAAGTA+TGG | + | chr1.1:17413840-17413859 | MS.gene026526:intron | 40.0% | |
| GTTGAGCAAATGCAAAATGC+TGG | + | chr1.1:17413538-17413557 | MS.gene026526:CDS | 40.0% | |
| GTTGGGATTTGGAAGCAATT+AGG | + | chr1.1:17414111-17414130 | MS.gene026526:intron | 40.0% | |
| TAATCCCACCTAATGGGAAA+AGG | - | chr1.1:17412657-17412676 | None:intergenic | 40.0% | |
| TAGAAAATGCCATTGTGTGC+AGG | + | chr1.1:17413581-17413600 | MS.gene026526:CDS | 40.0% | |
| TATGTTAAAGAGTCCCACGT+CGG | + | chr1.1:17411250-17411269 | MS.gene026526:intron | 40.0% | |
| TATTCTGATGAAACAGAGCC+TGG | - | chr1.1:17411980-17411999 | None:intergenic | 40.0% | |
| TCATTCTTCCAGACATGTAC+CGG | - | chr1.1:17412236-17412255 | None:intergenic | 40.0% | |
| TCATTGTAGTCACTGTAGAG+AGG | + | chr1.1:17414185-17414204 | MS.gene026526:intron | 40.0% | |
| TCTGGACAAAGCTATTTGCA+TGG | - | chr1.1:17413059-17413078 | None:intergenic | 40.0% | |
| TCTTGTTCTGTATGTGAGAG+AGG | + | chr1.1:17414036-17414055 | MS.gene026526:intron | 40.0% | |
| TGAGCAAATTCAACAGAAGC+AGG | - | chr1.1:17410195-17410214 | None:intergenic | 40.0% | |
| TGATACCACCTTCGAAATTG+TGG | - | chr1.1:17411352-17411371 | None:intergenic | 40.0% | |
| TGCACATCTTGATTTCTGCA+AGG | + | chr1.1:17411732-17411751 | MS.gene026526:intron | 40.0% | |
| TTCTGTATGTGAGAGAGGAT+TGG | + | chr1.1:17414041-17414060 | MS.gene026526:intron | 40.0% | |
| TTTCTGCATTGGAAGGTTCT+GGG | + | chr1.1:17410280-17410299 | MS.gene026526:CDS | 40.0% | |
| TTTGCAGTGCTAGTAAAGGT+TGG | + | chr1.1:17414337-17414356 | MS.gene026526:intron | 40.0% | |
| TTTGCCGACCCATCAAATAT+AGG | - | chr1.1:17412119-17412138 | None:intergenic | 40.0% | |
| ! | AAGGAAGGTGGTTTGAGTTT+AGG | + | chr1.1:17410157-17410176 | MS.gene026526:CDS | 40.0% |
| ! | ATGGCATCTTTTGATCTCTG+TGG | - | chr1.1:17412681-17412700 | None:intergenic | 40.0% |
| ! | ATTTTCATATCCACTCTCCC+AGG | + | chr1.1:17411959-17411978 | MS.gene026526:intron | 40.0% |
| ! | CCAATTGATTACAGCTCTGA+AGG | - | chr1.1:17413354-17413373 | None:intergenic | 40.0% |
| ! | GAGCTGTAATCAATTGGTTC+TGG | + | chr1.1:17413357-17413376 | MS.gene026526:intron | 40.0% |
| ! | GGATGACTTGATGATTCAAG+TGG | + | chr1.1:17410713-17410732 | MS.gene026526:intron | 40.0% |
| ! | GTGAGAATGGGTGTGATTTT+GGG | - | chr1.1:17410016-17410035 | None:intergenic | 40.0% |
| ! | GTGTAACGGAGAGAAGTTAA+GGG | + | chr1.1:17411085-17411104 | MS.gene026526:intron | 40.0% |
| ! | TAGAGCAACCTTTTCCCATT+AGG | + | chr1.1:17412646-17412665 | MS.gene026526:intron | 40.0% |
| ! | TATATTTGATGGGTCGGCAA+AGG | + | chr1.1:17412118-17412137 | MS.gene026526:CDS | 40.0% |
| ! | TATCCTACAAGTGTGTTGAC+GGG | - | chr1.1:17411533-17411552 | None:intergenic | 40.0% |
| ! | TCTAAAATCTTGTGACGGCA+TGG | - | chr1.1:17414393-17414412 | None:intergenic | 40.0% |
| ! | TGACTTGATGATTCAAGTGG+GGG | + | chr1.1:17410716-17410735 | MS.gene026526:intron | 40.0% |
| ! | TGCTTCTGTTGAATTTGCTC+AGG | + | chr1.1:17410194-17410213 | MS.gene026526:CDS | 40.0% |
| ! | TGTGTAACGGAGAGAAGTTA+AGG | + | chr1.1:17411084-17411103 | MS.gene026526:intron | 40.0% |
| !! | AAGAGCATCCATACGCAAAA+TGG | - | chr1.1:17411612-17411631 | None:intergenic | 40.0% |
| !! | AGGATTGGTAGTGTAAGAGT+AGG | + | chr1.1:17414056-17414075 | MS.gene026526:intron | 40.0% |
| !! | AGTTAAGTTGAGAGTTGCTG+AGG | + | chr1.1:17413314-17413333 | MS.gene026526:intron | 40.0% |
| !! | GTTCTGGGGTTGATAATTGT+AGG | + | chr1.1:17410295-17410314 | MS.gene026526:CDS | 40.0% |
| !! | TCTGGGATTCTTGTTGTTGA+AGG | + | chr1.1:17410971-17410990 | MS.gene026526:intron | 40.0% |
| !!! | CAGTTTTGAGAGGTTGTGTT+AGG | + | chr1.1:17411321-17411340 | MS.gene026526:intron | 40.0% |
| !!! | CCTAGTTTTTAGGTTCAGAG+TGG | - | chr1.1:17410783-17410802 | None:intergenic | 40.0% |
| AAAGTTCCGATTCTCACGCA+AGG | - | chr1.1:17412832-17412851 | None:intergenic | 45.0% | |
| AACACATGGCAACAGTAACG+AGG | - | chr1.1:17413136-17413155 | None:intergenic | 45.0% | |
| AAGTTCCGATTCTCACGCAA+GGG | - | chr1.1:17412831-17412850 | None:intergenic | 45.0% | |
| ACAGGTAAGGTCGTAAGGAT+AGG | + | chr1.1:17412316-17412335 | MS.gene026526:intron | 45.0% | |
| ACATAGCTGGGCATTAGGAA+CGG | - | chr1.1:17413637-17413656 | None:intergenic | 45.0% | |
| ACCACCTTCGAAATTGTGGA+CGG | - | chr1.1:17411348-17411367 | None:intergenic | 45.0% | |
| ACGCAAGGGTAATCATGATG+GGG | - | chr1.1:17412817-17412836 | None:intergenic | 45.0% | |
| AGATTGTGTCCTGGATTTGC+AGG | + | chr1.1:17410132-17410151 | MS.gene026526:CDS | 45.0% | |
| AGCTCCACATGTGAATGAAC+CGG | + | chr1.1:17412214-17412233 | MS.gene026526:CDS | 45.0% | |
| AGGCACTTCAAAAGTTGCCT+GGG | + | chr1.1:17414131-17414150 | MS.gene026526:intron | 45.0% | |
| CAAAGAGTGGAGTGATAAGG+AGG | + | chr1.1:17410742-17410761 | MS.gene026526:intron | 45.0% | |
| CACGCAAGGGTAATCATGAT+GGG | - | chr1.1:17412818-17412837 | None:intergenic | 45.0% | |
| CAGGCAAGAACTAACAAGAG+AGG | - | chr1.1:17413441-17413460 | None:intergenic | 45.0% | |
| CGTCAACACACTTGTAGGAT+AGG | + | chr1.1:17411532-17411551 | MS.gene026526:intron | 45.0% | |
| CTATCACATAGCTGGGCATT+AGG | - | chr1.1:17413642-17413661 | None:intergenic | 45.0% | |
| CTCTCGTTGTTTGCTCAGTT+TGG | + | chr1.1:17414426-17414445 | MS.gene026526:CDS | 45.0% | |
| CTCTTACGATATATGCAGGG+GGG | + | chr1.1:17414616-17414635 | MS.gene026526:intron | 45.0% | |
| CTTTCTGCATTGGAAGGTTC+TGG | + | chr1.1:17410279-17410298 | MS.gene026526:CDS | 45.0% | |
| CTTTGTGTAAAGATGGGGTG+AGG | + | chr1.1:17410235-17410254 | MS.gene026526:CDS | 45.0% | |
| GATACCATGCAACCAACACT+GGG | + | chr1.1:17413491-17413510 | MS.gene026526:intron | 45.0% | |
| GATTACCCTTGCGTGAGAAT+CGG | + | chr1.1:17412823-17412842 | MS.gene026526:intron | 45.0% | |
| GCACAAAGAGATCGTGAGAA+TGG | - | chr1.1:17410029-17410048 | None:intergenic | 45.0% | |
| GCATTTCCTTCAGAAGTGGT+TGG | + | chr1.1:17412269-17412288 | MS.gene026526:CDS | 45.0% | |
| GGCACACATAGTAGCTTACA+AGG | + | chr1.1:17414467-17414486 | MS.gene026526:CDS | 45.0% | |
| GGCTAGAGTTAGTTGGGATT+TGG | + | chr1.1:17414100-17414119 | MS.gene026526:intron | 45.0% | |
| GGTGTTAAAGAGTCCCACAT+CGG | + | chr1.1:17411428-17411447 | MS.gene026526:intron | 45.0% | |
| GGTTCATCACTGAAACGAAG+AGG | - | chr1.1:17414372-17414391 | None:intergenic | 45.0% | |
| GTAAAGATGGGGTGAGGATT+AGG | + | chr1.1:17410241-17410260 | MS.gene026526:CDS | 45.0% | |
| GTTACTCCAACCACTTCTGA+AGG | - | chr1.1:17412278-17412297 | None:intergenic | 45.0% | |
| TAAGCTACTATGTGTGCCAC+TGG | - | chr1.1:17414465-17414484 | None:intergenic | 45.0% | |
| TAGGCACTTCAAAAGTTGCC+TGG | + | chr1.1:17414130-17414149 | MS.gene026526:intron | 45.0% | |
| TATCCTTACGACCTTACCTG+TGG | - | chr1.1:17412317-17412336 | None:intergenic | 45.0% | |
| TCACGATCTCTTTGTGCAGA+CGG | + | chr1.1:17410032-17410051 | MS.gene026526:intron | 45.0% | |
| TCACGCAAGGGTAATCATGA+TGG | - | chr1.1:17412819-17412838 | None:intergenic | 45.0% | |
| TCATCACTGAAACGAAGAGG+TGG | - | chr1.1:17414369-17414388 | None:intergenic | 45.0% | |
| TCGCTAGCTATCACATAGCT+GGG | - | chr1.1:17413649-17413668 | None:intergenic | 45.0% | |
| TGAATGAACCGGTACATGTC+TGG | + | chr1.1:17412225-17412244 | MS.gene026526:CDS | 45.0% | |
| TGATACCATGCAACCAACAC+TGG | + | chr1.1:17413490-17413509 | MS.gene026526:intron | 45.0% | |
| TGCAGGTGCCTGTAAAAGAA+AGG | - | chr1.1:17412987-17413006 | None:intergenic | 45.0% | |
| TGCTGCATTTCCTTCAGAAG+TGG | + | chr1.1:17412265-17412284 | MS.gene026526:CDS | 45.0% | |
| TGTGGCTAATCCCACCTAAT+GGG | - | chr1.1:17412663-17412682 | None:intergenic | 45.0% | |
| TTAAAGAGTCCCACATCGGT+TGG | + | chr1.1:17411432-17411451 | MS.gene026526:intron | 45.0% | |
| TTCTGCATTGGAAGGTTCTG+GGG | + | chr1.1:17410281-17410300 | MS.gene026526:CDS | 45.0% | |
| TTTCCACAGGTAAGGTCGTA+AGG | + | chr1.1:17412311-17412330 | MS.gene026526:intron | 45.0% | |
| ! | AAGCTACTATGTGTGCCACT+GGG | - | chr1.1:17414464-17414483 | None:intergenic | 45.0% |
| ! | ACAAGCTGCTACTTGAGTTG+AGG | + | chr1.1:17412589-17412608 | MS.gene026526:intron | 45.0% |
| ! | AGCAACCTTTTCCCATTAGG+TGG | + | chr1.1:17412649-17412668 | MS.gene026526:intron | 45.0% |
| ! | CGTGAGAATGGGTGTGATTT+TGG | - | chr1.1:17410017-17410036 | None:intergenic | 45.0% |
| ! | CTCTAAGAGGAATTGTGGAG+CGG | + | chr1.1:17410070-17410089 | MS.gene026526:CDS | 45.0% |
| ! | CTTTTACAGGCACCTGCAAT+TGG | + | chr1.1:17412989-17413008 | MS.gene026526:intron | 45.0% |
| ! | GCAACCTTTTCCCATTAGGT+GGG | + | chr1.1:17412650-17412669 | MS.gene026526:intron | 45.0% |
| ! | GGAGCATTTGCTTTCTGCAT+TGG | + | chr1.1:17410269-17410288 | MS.gene026526:CDS | 45.0% |
| ! | TAAAGAGTCCCACATCGGTT+GGG | + | chr1.1:17411433-17411452 | MS.gene026526:intron | 45.0% |
| ! | TTGATGATCTGAGAGCTCTG+AGG | - | chr1.1:17409922-17409941 | None:intergenic | 45.0% |
| !! | CGGTTTTGTGAGGTTGTGTA+AGG | + | chr1.1:17411507-17411526 | MS.gene026526:intron | 45.0% |
| !! | GCTTACAAGGTTTTGGCCTT+TGG | + | chr1.1:17414480-17414499 | MS.gene026526:intron | 45.0% |
| !! | TGTACCGGTTCATTCACATG+TGG | - | chr1.1:17412221-17412240 | None:intergenic | 45.0% |
| !!! | AATCGTCACCCAGTTTTGAG+AGG | + | chr1.1:17411311-17411330 | MS.gene026526:intron | 45.0% |
| AAGAGGAATTGTGGAGCGGA+AGG | + | chr1.1:17410074-17410093 | MS.gene026526:CDS | 50.0% | |
| ACCACCTGCTATCAGGTTTC+CGG | + | chr1.1:17411395-17411414 | MS.gene026526:intron | 50.0% | |
| ACGATCTCTTTGTGCAGACG+GGG | + | chr1.1:17410034-17410053 | MS.gene026526:intron | 50.0% | |
| AGAGGAATTGTGGAGCGGAA+GGG | + | chr1.1:17410075-17410094 | MS.gene026526:CDS | 50.0% | |
| AGGGGGTTGTAGAAAACCAC+TGG | - | chr1.1:17413018-17413037 | None:intergenic | 50.0% | |
| CACGATCTCTTTGTGCAGAC+GGG | + | chr1.1:17410033-17410052 | MS.gene026526:intron | 50.0% | |
| CCACCTTCGAAATTGTGGAC+GGG | - | chr1.1:17411347-17411366 | None:intergenic | 50.0% | |
| CTGGATTTGCAGGTCAAGGA+AGG | + | chr1.1:17410142-17410161 | MS.gene026526:CDS | 50.0% | |
| CTGTGGCTAATCCCACCTAA+TGG | - | chr1.1:17412664-17412683 | None:intergenic | 50.0% | |
| CTTCCTTGACCTGCAAATCC+AGG | - | chr1.1:17410144-17410163 | None:intergenic | 50.0% | |
| GAAATCCTCACCTCACAAGC+CGG | + | chr1.1:17411487-17411506 | MS.gene026526:intron | 50.0% | |
| GATTTGCAGGTCAAGGAAGG+TGG | + | chr1.1:17410145-17410164 | MS.gene026526:CDS | 50.0% | |
| GCTATGTGATAGCTAGCGAC+CGG | + | chr1.1:17413650-17413669 | MS.gene026526:intron | 50.0% | |
| GTCGCTAGCTATCACATAGC+TGG | - | chr1.1:17413650-17413669 | None:intergenic | 50.0% | |
| TGGTAATCAAGGACTCCCAG+TGG | + | chr1.1:17414446-17414465 | MS.gene026526:CDS | 50.0% | |
| TGTCCTGGATTTGCAGGTCA+AGG | + | chr1.1:17410138-17410157 | MS.gene026526:CDS | 50.0% | |
| TTTAACACCCCTCTCACACC+CGG | - | chr1.1:17411417-17411436 | None:intergenic | 50.0% | |
| ! | ATACTCGTCTCAGGTTGCAC+AGG | - | chr1.1:17414578-17414597 | None:intergenic | 50.0% |
| ! | TGATCAAGGTGATGATGCCG+AGG | + | chr1.1:17410338-17410357 | MS.gene026526:CDS | 50.0% |
| ! | TGATGGGTCGGCAAAGGAAT+GGG | + | chr1.1:17412124-17412143 | MS.gene026526:CDS | 50.0% |
| ! | TTGATGGGTCGGCAAAGGAA+TGG | + | chr1.1:17412123-17412142 | MS.gene026526:CDS | 50.0% |
| !! | GAAGAGTATCCACCCAGTGT+TGG | - | chr1.1:17413506-17413525 | None:intergenic | 50.0% |
| !! | GCATTCAGGGAAGGTATCGA+CGG | + | chr1.1:17410107-17410126 | MS.gene026526:CDS | 50.0% |
| AAAGGAATGGGTGGCAGCCT+TGG | + | chr1.1:17412136-17412155 | MS.gene026526:CDS | 55.0% | |
| AACCACTGGCAGCCAATTGC+AGG | - | chr1.1:17413004-17413023 | None:intergenic | 55.0% | |
| ACACCCGGAAACCTGATAGC+AGG | - | chr1.1:17411402-17411421 | None:intergenic | 55.0% | |
| ACCATGCAACCAACACTGGG+TGG | + | chr1.1:17413494-17413513 | MS.gene026526:intron | 55.0% | |
| AGGCCCGTCAACACACTTGT+AGG | + | chr1.1:17411527-17411546 | MS.gene026526:intron | 55.0% | |
| AGGCCCGTCCACAATTTCGA+AGG | + | chr1.1:17411341-17411360 | MS.gene026526:intron | 55.0% | |
| ATCAGGTTTCCGGGTGTGAG+AGG | + | chr1.1:17411405-17411424 | MS.gene026526:intron | 55.0% | |
| CAAGTGGGGGAGTCAAAGAG+TGG | + | chr1.1:17410729-17410748 | MS.gene026526:intron | 55.0% | |
| CCACCTGCTATCAGGTTTCC+GGG | + | chr1.1:17411396-17411415 | MS.gene026526:intron | 55.0% | |
| CCCGTCCACAATTTCGAAGG+TGG | + | chr1.1:17411344-17411363 | MS.gene026526:intron | 55.0% | |
| CCTGATAGCAGGTGGTCCAA+CGG | - | chr1.1:17411391-17411410 | None:intergenic | 55.0% | |
| CTGATAGCAGGTGGTCCAAC+GGG | - | chr1.1:17411390-17411409 | None:intergenic | 55.0% | |
| GTGGCAGCCTTGGAAGAAGT+TGG | + | chr1.1:17412146-17412165 | MS.gene026526:CDS | 55.0% | |
| TCAGGTTTCCGGGTGTGAGA+GGG | + | chr1.1:17411406-17411425 | MS.gene026526:intron | 55.0% | |
| TCGACGGTGAGATTGTGTCC+TGG | + | chr1.1:17410123-17410142 | MS.gene026526:CDS | 55.0% | |
| TGAAACAGAGCCTGGGAGAG+TGG | - | chr1.1:17411972-17411991 | None:intergenic | 55.0% | |
| TGGGGTGAGGATTAGGACTG+TGG | + | chr1.1:17410248-17410267 | MS.gene026526:CDS | 55.0% | |
| ! | GATTTGGCACGCCGACTGAT+GGG | + | chr1.1:17414655-17414674 | MS.gene026526:CDS | 55.0% |
| ! | TGATTTGGCACGCCGACTGA+TGG | + | chr1.1:17414654-17414673 | MS.gene026526:CDS | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | - | chr1.1:17411495-17411514 | None:intergenic | 55.0% |
| !! | CCTCACAAAACCGGCTTGTG+AGG | - | chr1.1:17411500-17411519 | None:intergenic | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+AGG | + | chr1.1:17411497-17411516 | MS.gene026526:intron | 55.0% |
| !! | TCCACCCAGTGTTGGTTGCA+TGG | - | chr1.1:17413498-17413517 | None:intergenic | 55.0% |
| AGGCCATCTCCCAACCGATG+TGG | - | chr1.1:17411445-17411464 | None:intergenic | 60.0% | |
| CACCTGCAATTGGCTGCCAG+TGG | + | chr1.1:17412999-17413018 | MS.gene026526:CDS | 60.0% | |
| CAGGTTTCCGGGTGTGAGAG+GGG | + | chr1.1:17411407-17411426 | MS.gene026526:intron | 60.0% | |
| CCCGGAAACCTGATAGCAGG+TGG | - | chr1.1:17411399-17411418 | None:intergenic | 60.0% | |
| CCGTTGGACCACCTGCTATC+AGG | + | chr1.1:17411388-17411407 | MS.gene026526:intron | 60.0% | |
| GGCCATCTCCCAACCGATGT+GGG | - | chr1.1:17411444-17411463 | None:intergenic | 60.0% | |
| GGCCATCTCTCAACCGACGT+GGG | - | chr1.1:17411266-17411285 | None:intergenic | 60.0% | |
| TGGCCATCTCTCAACCGACG+TGG | - | chr1.1:17411267-17411286 | None:intergenic | 60.0% | |
| TGGGTCGGCAAAGGAATGGG+TGG | + | chr1.1:17412127-17412146 | MS.gene026526:CDS | 60.0% | |
| ! | GTCCCACATCGGTTGGGAGA+TGG | + | chr1.1:17411439-17411458 | MS.gene026526:intron | 60.0% |
| ! | GTCCCACGTCGGTTGAGAGA+TGG | + | chr1.1:17411261-17411280 | MS.gene026526:intron | 60.0% |
| GAGCCTCCTCCAAGACCCGT+TGG | + | chr1.1:17411372-17411391 | MS.gene026526:intron | 65.0% | |
| GCAGGTGGTCCAACGGGTCT+TGG | - | chr1.1:17411384-17411403 | None:intergenic | 65.0% | |
| GGTCCAACGGGTCTTGGAGG+AGG | - | chr1.1:17411378-17411397 | None:intergenic | 65.0% | |
| GGTGGTCCAACGGGTCTTGG+AGG | - | chr1.1:17411381-17411400 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 17409911 | 17414687 | 17409911 | ID=MS.gene026526 |
| chr1.1 | mRNA | 17409911 | 17414687 | 17409911 | ID=MS.gene026526.t1;Parent=MS.gene026526 |
| chr1.1 | exon | 17409911 | 17409961 | 17409911 | ID=MS.gene026526.t1.exon1;Parent=MS.gene026526.t1 |
| chr1.1 | CDS | 17409911 | 17409961 | 17409911 | ID=cds.MS.gene026526.t1;Parent=MS.gene026526.t1 |
| chr1.1 | exon | 17410051 | 17410359 | 17410051 | ID=MS.gene026526.t1.exon2;Parent=MS.gene026526.t1 |
| chr1.1 | CDS | 17410051 | 17410359 | 17410051 | ID=cds.MS.gene026526.t1;Parent=MS.gene026526.t1 |
| chr1.1 | exon | 17412113 | 17412319 | 17412113 | ID=MS.gene026526.t1.exon3;Parent=MS.gene026526.t1 |
| chr1.1 | CDS | 17412113 | 17412319 | 17412113 | ID=cds.MS.gene026526.t1;Parent=MS.gene026526.t1 |
| chr1.1 | exon | 17412998 | 17413099 | 17412998 | ID=MS.gene026526.t1.exon4;Parent=MS.gene026526.t1 |
| chr1.1 | CDS | 17412998 | 17413099 | 17412998 | ID=cds.MS.gene026526.t1;Parent=MS.gene026526.t1 |
| chr1.1 | exon | 17413538 | 17413602 | 17413538 | ID=MS.gene026526.t1.exon5;Parent=MS.gene026526.t1 |
| chr1.1 | CDS | 17413538 | 17413602 | 17413538 | ID=cds.MS.gene026526.t1;Parent=MS.gene026526.t1 |
| chr1.1 | exon | 17414344 | 17414488 | 17414344 | ID=MS.gene026526.t1.exon6;Parent=MS.gene026526.t1 |
| chr1.1 | CDS | 17414344 | 17414488 | 17414344 | ID=cds.MS.gene026526.t1;Parent=MS.gene026526.t1 |
| chr1.1 | exon | 17414634 | 17414687 | 17414634 | ID=MS.gene026526.t1.exon7;Parent=MS.gene026526.t1 |
| chr1.1 | CDS | 17414634 | 17414687 | 17414634 | ID=cds.MS.gene026526.t1;Parent=MS.gene026526.t1 |
| Gene Sequence |
| Protein sequence |
