Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83064.t1 | XP_013466579.1 | 95.5 | 310 | 14 | 0 | 1 | 310 | 1 | 310 | 1.00E-172 | 615.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83064.t1 | F4IAT8 | 66.1 | 298 | 101 | 0 | 9 | 306 | 26 | 323 | 5.3e-114 | 412.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83064.t1 | A0A072VG88 | 95.5 | 310 | 14 | 0 | 1 | 310 | 1 | 310 | 7.3e-173 | 615.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene83064 | MS.gene002655 | PPI |
| MS.gene002653 | MS.gene83064 | PPI |
| MS.gene063405 | MS.gene83064 | PPI |
| MS.gene83064 | MS.gene25182 | PPI |
| MS.gene83064 | MS.gene004332 | PPI |
| MS.gene039144 | MS.gene83064 | PPI |
| MS.gene83064 | MS.gene026526 | PPI |
| MS.gene98976 | MS.gene83064 | PPI |
| MS.gene026526 | MS.gene83064 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83064.t1 | MTR_1g032430 | 95.484 | 310 | 14 | 0 | 1 | 310 | 1 | 310 | 0.0 | 615 |
| MS.gene83064.t1 | MTR_1g032430 | 94.170 | 223 | 13 | 0 | 1 | 223 | 1 | 223 | 2.44e-157 | 438 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83064.t1 | AT1G24793 | 66.107 | 298 | 101 | 0 | 9 | 306 | 26 | 323 | 1.44e-144 | 410 |
| MS.gene83064.t1 | AT1G25054 | 66.107 | 298 | 101 | 0 | 9 | 306 | 26 | 323 | 1.44e-144 | 410 |
| MS.gene83064.t1 | AT1G25145 | 66.107 | 298 | 101 | 0 | 9 | 306 | 26 | 323 | 1.44e-144 | 410 |
| MS.gene83064.t1 | AT1G25210 | 66.107 | 298 | 101 | 0 | 9 | 306 | 26 | 323 | 1.44e-144 | 410 |
| MS.gene83064.t1 | AT1G24793 | 61.404 | 228 | 88 | 0 | 9 | 236 | 26 | 253 | 6.64e-99 | 291 |
| MS.gene83064.t1 | AT1G25210 | 61.404 | 228 | 88 | 0 | 9 | 236 | 26 | 253 | 6.64e-99 | 291 |
Find 98 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCGCGTTGGAGGGTTC+TGG | 0.161006 | 1.2:+16938100 | MS.gene83064:CDS |
| TAGGATTCAGGTTGAAAATT+TGG | 0.168923 | 1.2:+16938135 | MS.gene83064:CDS |
| GGTTGATAATTGTAGGATTC+AGG | 0.270878 | 1.2:+16938123 | MS.gene83064:CDS |
| CTCATAAATGCAGAAGGTTC+TGG | 0.297545 | 1.2:-16941053 | None:intergenic |
| AAGGAAGGTGGTTTGAGTTT+AGG | 0.298029 | 1.2:+16937978 | MS.gene83064:CDS |
| CCATGCATTACATCTTGATT+TGG | 0.320373 | 1.2:+16942573 | MS.gene83064:CDS |
| TTTCCGCGTTGGAGGGTTCT+GGG | 0.323991 | 1.2:+16938101 | MS.gene83064:CDS |
| CTCTCGCTGTTTGCTCAGTT+TGG | 0.325357 | 1.2:+16942360 | MS.gene83064:CDS |
| GTTTGAGTTTAGGAACAATT+TGG | 0.329929 | 1.2:+16937988 | MS.gene83064:CDS |
| GTAAAGATGGGGTGAGGATT+AGG | 0.358641 | 1.2:+16938062 | MS.gene83064:CDS |
| GAGATAGCAACTGATGTTGA+TGG | 0.375553 | 1.2:+16940158 | MS.gene83064:CDS |
| TGCTTCTGTTGAATTTGCTC+AGG | 0.378400 | 1.2:+16938015 | MS.gene83064:CDS |
| AAGGGAATCTCATTGCATTC+GGG | 0.378736 | 1.2:+16937914 | MS.gene83064:CDS |
| AACCACTGGCAGCCAATTGC+AGG | 0.384480 | 1.2:-16940980 | None:intergenic |
| GTTCTGGGGTTGATAATTGT+AGG | 0.389249 | 1.2:+16938116 | MS.gene83064:CDS |
| GCGCAGATTCCTATATTTGA+TGG | 0.390435 | 1.2:+16940092 | MS.gene83064:intron |
| AGATTGTGTCCTGGATTTGC+AGG | 0.390889 | 1.2:+16937953 | MS.gene83064:CDS |
| TGTACTACTTTGTGTAAAGA+TGG | 0.393389 | 1.2:+16938049 | MS.gene83064:CDS |
| GAAGTGGTTGGAGTAACTTA+TGG | 0.399861 | 1.2:+16940266 | MS.gene83064:CDS |
| GAAGGGAATCTCATTGCATT+CGG | 0.408598 | 1.2:+16937913 | MS.gene83064:CDS |
| TAGGGAATGGGTGGCAGCCT+TGG | 0.431192 | 1.2:+16940121 | MS.gene83064:CDS |
| TGATGGGTCGGCTAGGGAAT+GGG | 0.431195 | 1.2:+16940109 | MS.gene83064:CDS |
| TTTGCTCAGTTTGGTAATCA+AGG | 0.435061 | 1.2:+16942369 | MS.gene83064:CDS |
| GATTTGGCACGCCGACTGAT+GGG | 0.453180 | 1.2:+16942589 | MS.gene83064:CDS |
| GAATAAAACAAATCATCAAA+GGG | 0.457717 | 1.2:-16941013 | None:intergenic |
| TGAATGAACCGGTACATGTT+TGG | 0.458151 | 1.2:+16940210 | MS.gene83064:CDS |
| GCATTTGCTTTCCGCGTTGG+AGG | 0.459943 | 1.2:+16938093 | MS.gene83064:CDS |
| GTTGAAAATTTGGATGATCA+AGG | 0.461008 | 1.2:+16938145 | MS.gene83064:CDS |
| CTAGCCGACCCATCAAATAT+AGG | 0.461299 | 1.2:-16940101 | None:intergenic |
| CAGAACCTTCTGCATTTATG+AGG | 0.462949 | 1.2:+16941054 | MS.gene83064:CDS |
| GGAGCATTTGCTTTCCGCGT+TGG | 0.463915 | 1.2:+16938090 | MS.gene83064:CDS |
| CATTTGCTTTCCGCGTTGGA+GGG | 0.472727 | 1.2:+16938094 | MS.gene83064:CDS |
| TTGATGGGTCGGCTAGGGAA+TGG | 0.472944 | 1.2:+16940108 | MS.gene83064:CDS |
| GTACTACTTTGTGTAAAGAT+GGG | 0.493098 | 1.2:+16938050 | MS.gene83064:CDS |
| TTTGCAGTGCTAGTAAAGGT+TGG | 0.495767 | 1.2:+16942271 | MS.gene83064:intron |
| TGATTTGGCACGCCGACTGA+TGG | 0.498590 | 1.2:+16942588 | MS.gene83064:CDS |
| CTATATTTGATGGGTCGGCT+AGG | 0.502389 | 1.2:+16940102 | MS.gene83064:CDS |
| CTTCCTTGACCTGCAAATCC+AGG | 0.503251 | 1.2:-16937962 | None:intergenic |
| AGCTCCACATGTGAATGAAC+CGG | 0.504944 | 1.2:+16940199 | MS.gene83064:CDS |
| CAAAATGCTGGACTTATCAA+AGG | 0.505054 | 1.2:+16941498 | MS.gene83064:CDS |
| TAGAAAATGCCATTGTGTGC+AGG | 0.508226 | 1.2:+16941529 | MS.gene83064:CDS |
| TGCAGCATTTCCTTCAGAAG+TGG | 0.509016 | 1.2:+16940250 | MS.gene83064:CDS |
| GGCACACATAGTAGCTTACA+AGG | 0.509534 | 1.2:+16942401 | MS.gene83064:CDS |
| GGAATAAAACAAATCATCAA+AGG | 0.512563 | 1.2:-16941014 | None:intergenic |
| AAAATGCTGGACTTATCAAA+GGG | 0.513412 | 1.2:+16941499 | MS.gene83064:CDS |
| TAAGCTACTATGTGTGCCAC+TGG | 0.514194 | 1.2:-16942396 | None:intergenic |
| TATATTTGATGGGTCGGCTA+GGG | 0.519772 | 1.2:+16940103 | MS.gene83064:CDS |
| CGCAGATTCCTATATTTGAT+GGG | 0.523997 | 1.2:+16940093 | MS.gene83064:intron |
| GTTGAGCAAATGCAAAATGC+TGG | 0.524487 | 1.2:+16941486 | MS.gene83064:CDS |
| CACCTGCAATTGGCTGCCAG+TGG | 0.526884 | 1.2:+16940978 | MS.gene83064:CDS |
| GTGGCAGCCTTGGAAGAAGT+TGG | 0.528078 | 1.2:+16940131 | MS.gene83064:CDS |
| AAGCTTCAACAAACTCTAAG+AGG | 0.529912 | 1.2:+16937878 | MS.gene83064:CDS |
| GCATTTCCTTCAGAAGTGGT+TGG | 0.531128 | 1.2:+16940254 | MS.gene83064:CDS |
| ACAAACTCTAAGAGGAATTG+TGG | 0.537569 | 1.2:+16937886 | MS.gene83064:CDS |
| AACCTTCTGCATTTATGAGG+AGG | 0.537629 | 1.2:+16941057 | MS.gene83064:CDS |
| AAGAGGAATTGTGGAGCGGA+AGG | 0.538994 | 1.2:+16937895 | MS.gene83064:CDS |
| GATTCCTATATTTGATGGGT+CGG | 0.549220 | 1.2:+16940097 | MS.gene83064:intron |
| TCTAAAATCTTGTGACGGCA+TGG | 0.551674 | 1.2:-16942324 | None:intergenic |
| TTCCGCGTTGGAGGGTTCTG+GGG | 0.553823 | 1.2:+16938102 | MS.gene83064:CDS |
| CTCTAAACCAACTTCTTCCA+AGG | 0.554837 | 1.2:-16940138 | None:intergenic |
| TGAGCAAATTCAACAGAAGC+AGG | 0.556051 | 1.2:-16938013 | None:intergenic |
| TGTCCTGGATTTGCAGGTCA+AGG | 0.566608 | 1.2:+16937959 | MS.gene83064:CDS |
| TCATTCCTCCAAACATGTAC+CGG | 0.567307 | 1.2:-16940218 | None:intergenic |
| GATCATCAAAACTCGTCACA+TGG | 0.570839 | 1.2:+16937754 | MS.gene83064:CDS |
| CTTTGTGTAAAGATGGGGTG+AGG | 0.573979 | 1.2:+16938056 | MS.gene83064:CDS |
| CTGGATTTGCAGGTCAAGGA+AGG | 0.576111 | 1.2:+16937963 | MS.gene83064:CDS |
| AATAAAACAAATCATCAAAG+GGG | 0.576399 | 1.2:-16941012 | None:intergenic |
| AATCTCATTGCATTCGGGGA+AGG | 0.578982 | 1.2:+16937919 | MS.gene83064:CDS |
| GTTACTCCAACCACTTCTGA+AGG | 0.580389 | 1.2:-16940260 | None:intergenic |
| TTATGGCATAAACTTTCCAC+AGG | 0.581378 | 1.2:+16940283 | MS.gene83064:CDS |
| GATTTGCAGGTCAAGGAAGG+TGG | 0.585501 | 1.2:+16937966 | MS.gene83064:CDS |
| AACCTCCTCATAAATGCAGA+AGG | 0.588269 | 1.2:-16941059 | None:intergenic |
| TCTGGACAAAGCTATTTGCA+TGG | 0.591663 | 1.2:-16941035 | None:intergenic |
| ATGAACCGGTACATGTTTGG+AGG | 0.594386 | 1.2:+16940213 | MS.gene83064:CDS |
| TTCACGTCATCCCCATCAGT+CGG | 0.599731 | 1.2:-16942600 | None:intergenic |
| CCAAATCAAGATGTAATGCA+TGG | 0.608554 | 1.2:-16942573 | None:intergenic |
| TCGACGGTGAGATTGTGTCC+TGG | 0.609644 | 1.2:+16937944 | MS.gene83064:CDS |
| ATTTGGCACGCCGACTGATG+GGG | 0.611355 | 1.2:+16942590 | MS.gene83064:CDS |
| TACTACTTTGTGTAAAGATG+GGG | 0.616242 | 1.2:+16938051 | MS.gene83064:CDS |
| TAAGATCTAAAATCTTGTGA+CGG | 0.629623 | 1.2:-16942329 | None:intergenic |
| AGAGGAATTGTGGAGCGGAA+GGG | 0.632291 | 1.2:+16937896 | MS.gene83064:CDS |
| TGGGGTGAGGATTAGGACTG+TGG | 0.642809 | 1.2:+16938069 | MS.gene83064:CDS |
| TCATCACTGAAACGAAGAGG+TGG | 0.642947 | 1.2:-16942300 | None:intergenic |
| CTCTAAGAGGAATTGTGGAG+CGG | 0.643430 | 1.2:+16937891 | MS.gene83064:CDS |
| AAGCTACTATGTGTGCCACT+GGG | 0.645381 | 1.2:-16942395 | None:intergenic |
| TGGGTCGGCTAGGGAATGGG+TGG | 0.651920 | 1.2:+16940112 | MS.gene83064:CDS |
| ATAAAACAAATCATCAAAGG+GGG | 0.664116 | 1.2:-16941011 | None:intergenic |
| AAGCAAATACCTGCACACAA+TGG | 0.670930 | 1.2:-16941538 | None:intergenic |
| GCATTCGGGGAAGGTATCGA+CGG | 0.672855 | 1.2:+16937928 | MS.gene83064:CDS |
| GGTTCATCACTGAAACGAAG+AGG | 0.683820 | 1.2:-16942303 | None:intergenic |
| AGGGAATCTCATTGCATTCG+GGG | 0.699614 | 1.2:+16937915 | MS.gene83064:CDS |
| AATGCTGGACTTATCAAAGG+GGG | 0.702132 | 1.2:+16941501 | MS.gene83064:CDS |
| TGATCAAGGTGATGATGCCG+AGG | 0.707861 | 1.2:+16938159 | MS.gene83064:CDS |
| AACCCCAGAACCCTCCAACG+CGG | 0.715834 | 1.2:-16938104 | None:intergenic |
| TGTACCGGTTCATTCACATG+TGG | 0.732995 | 1.2:-16940203 | None:intergenic |
| AAATGCTGGACTTATCAAAG+GGG | 0.734053 | 1.2:+16941500 | MS.gene83064:CDS |
| TGGTAATCAAGGACTCCCAG+TGG | 0.735252 | 1.2:+16942380 | MS.gene83064:CDS |
| TTACACAAAGTAGTACAAAG+CGG | 0.761682 | 1.2:-16938043 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAAATACATAGTAAA+AGG | - | chr1.2:16942447-16942466 | None:intergenic | 10.0% |
| !! | TAAATAAATAAATACAAACT+TGG | + | chr1.2:16939054-16939073 | MS.gene83064:intron | 10.0% |
| !!! | AATAAATCGAATTTTAATTA+AGG | + | chr1.2:16938945-16938964 | MS.gene83064:intron | 10.0% |
| !!! | AATAAATCGAATTTTAATTA+AGG | - | chr1.2:16938964-16938945 | None:intergenic | 10.0% |
| !!! | AATTAAAATTCGATTTATTT+TGG | + | chr1.2:16938669-16938688 | MS.gene83064:intron | 10.0% |
| !!! | AATTAAAATTCGATTTATTT+TGG | - | chr1.2:16938688-16938669 | None:intergenic | 10.0% |
| !!! | ATAAATCGAATTTTAATTAA+GGG | + | chr1.2:16938946-16938965 | MS.gene83064:intron | 10.0% |
| !!! | ATAAATCGAATTTTAATTAA+GGG | - | chr1.2:16938965-16938946 | None:intergenic | 10.0% |
| !! | AAGGAAAATAAAAAAGAAAT+CGG | + | chr1.2:16940719-16940738 | MS.gene83064:intron | 15.0% |
| !! | AATAAGTTAAAAACAACTAA+CGG | + | chr1.2:16939758-16939777 | MS.gene83064:intron | 15.0% |
| !! | AGAATGTAATGTATTAATAT+GGG | + | chr1.2:16938266-16938285 | MS.gene83064:intron | 15.0% |
| !! | TAGAATGTAATGTATTAATA+TGG | + | chr1.2:16938265-16938284 | MS.gene83064:intron | 15.0% |
| !!! | AAATGTTAGTATTAGTTTTT+AGG | - | chr1.2:16939021-16939040 | None:intergenic | 15.0% |
| !!! | AGTTTATTTAGAACTTATTT+GGG | - | chr1.2:16939843-16939862 | None:intergenic | 15.0% |
| !!! | ATTTCTTTTTTATTTTCCTT+TGG | - | chr1.2:16940719-16940738 | None:intergenic | 15.0% |
| !! | AACTTATTTCAACAACTTAT+TGG | - | chr1.2:16939746-16939765 | None:intergenic | 20.0% |
| !! | AATAAAACAAATCATCAAAG+GGG | - | chr1.2:16941015-16941034 | None:intergenic | 20.0% |
| !! | AATTATAATAAATGTCCAGT+AGG | - | chr1.2:16940414-16940433 | None:intergenic | 20.0% |
| !! | ACAGCAAGAAAATTTAATTA+CGG | - | chr1.2:16940022-16940041 | None:intergenic | 20.0% |
| !! | ACTTATTACTAATTCTTGAT+GGG | + | chr1.2:16940538-16940557 | MS.gene83064:intron | 20.0% |
| !! | AGTACATGGAAATATTTAAA+TGG | - | chr1.2:16940367-16940386 | None:intergenic | 20.0% |
| !! | ATAATCTTAGAAATTGTTGA+CGG | - | chr1.2:16939366-16939385 | None:intergenic | 20.0% |
| !! | ATACTATAACAAACCATATT+TGG | - | chr1.2:16940748-16940767 | None:intergenic | 20.0% |
| !! | ATTATAATAAATGTCCAGTA+GGG | - | chr1.2:16940413-16940432 | None:intergenic | 20.0% |
| !! | CTTAAAAATAGTTTACTCAA+AGG | - | chr1.2:16939712-16939731 | None:intergenic | 20.0% |
| !! | GAATAAAACAAATCATCAAA+GGG | - | chr1.2:16941016-16941035 | None:intergenic | 20.0% |
| !! | TACTTATTACTAATTCTTGA+TGG | + | chr1.2:16940537-16940556 | MS.gene83064:intron | 20.0% |
| !! | TATTTCAAGAACTAAATGTA+AGG | - | chr1.2:16940046-16940065 | None:intergenic | 20.0% |
| !! | TCAACCTACAAATTAAAAAA+GGG | - | chr1.2:16941471-16941490 | None:intergenic | 20.0% |
| !! | TGGGTTTATTAATTATATCA+TGG | - | chr1.2:16939824-16939843 | None:intergenic | 20.0% |
| !! | TTAAAATACATAGTAAAAGG+AGG | - | chr1.2:16942444-16942463 | None:intergenic | 20.0% |
| !! | TTGAATTAAAACTAACAGAA+AGG | - | chr1.2:16938727-16938746 | None:intergenic | 20.0% |
| !! | TTGAATTAAAACTAACTGAA+AGG | + | chr1.2:16938886-16938905 | MS.gene83064:intron | 20.0% |
| !!! | AATCAAGATTTTTCTATTAC+TGG | + | chr1.2:16941953-16941972 | MS.gene83064:intron | 20.0% |
| !!! | AGTTTTAATTCAAAAACGTT+AGG | + | chr1.2:16938734-16938753 | MS.gene83064:intron | 20.0% |
| !!! | AGTTTTAATTCAAAAACGTT+AGG | - | chr1.2:16938753-16938734 | None:intergenic | 20.0% |
| !!! | ATGTTTTACCTAATTTTCTA+AGG | + | chr1.2:16940475-16940494 | MS.gene83064:intron | 20.0% |
| !!! | GAGTTTATTTAGAACTTATT+TGG | - | chr1.2:16939844-16939863 | None:intergenic | 20.0% |
| !!! | TTTAGGCTAAATTACATTTT+TGG | - | chr1.2:16939004-16939023 | None:intergenic | 20.0% |
| ! | AGATGACAATCAATCATATA+AGG | - | chr1.2:16941364-16941383 | None:intergenic | 25.0% |
| ! | ATAAAACAAATCATCAAAGG+GGG | - | chr1.2:16941014-16941033 | None:intergenic | 25.0% |
| ! | ATTACTGTCAGTTATCTATT+TGG | - | chr1.2:16941253-16941272 | None:intergenic | 25.0% |
| ! | CTCAACCTACAAATTAAAAA+AGG | - | chr1.2:16941472-16941491 | None:intergenic | 25.0% |
| ! | CTGAATAAGTGTTTATAAGT+GGG | + | chr1.2:16939117-16939136 | MS.gene83064:intron | 25.0% |
| ! | GAAATTAGGTACATAAATCT+AGG | + | chr1.2:16941738-16941757 | MS.gene83064:intron | 25.0% |
| ! | GAGTTTATAATATGTGACAT+AGG | - | chr1.2:16939460-16939479 | None:intergenic | 25.0% |
| ! | GATACTACCTAAATAGTTAA+GGG | - | chr1.2:16938636-16938655 | None:intergenic | 25.0% |
| ! | GATACTAGCTAAATAGTTAA+GGG | + | chr1.2:16938977-16938996 | MS.gene83064:intron | 25.0% |
| ! | GATGACAATCAATCATATAA+GGG | - | chr1.2:16941363-16941382 | None:intergenic | 25.0% |
| ! | GATTATACATAAACACTTGT+AGG | + | chr1.2:16939380-16939399 | MS.gene83064:intron | 25.0% |
| ! | GATTTATGTACCTAATTTCA+TGG | - | chr1.2:16941737-16941756 | None:intergenic | 25.0% |
| ! | GGAATAAAACAAATCATCAA+AGG | - | chr1.2:16941017-16941036 | None:intergenic | 25.0% |
| ! | GTATATGTGAAAACTGTAAA+AGG | - | chr1.2:16939482-16939501 | None:intergenic | 25.0% |
| ! | TAATCTTAGAAATTGTTGAC+GGG | - | chr1.2:16939365-16939384 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCGATATAAAC+AGG | - | chr1.2:16938292-16938311 | None:intergenic | 25.0% |
| ! | TCTTTCAACCTTAGAAAATT+AGG | - | chr1.2:16940486-16940505 | None:intergenic | 25.0% |
| ! | TGAATAAGTGTTTATAAGTG+GGG | + | chr1.2:16939118-16939137 | MS.gene83064:intron | 25.0% |
| ! | TTTGGTCCAAATATTATAAG+AGG | + | chr1.2:16939684-16939703 | MS.gene83064:intron | 25.0% |
| !! | AAATCAAGATGTGCATATTT+TGG | - | chr1.2:16939655-16939674 | None:intergenic | 25.0% |
| !! | AAATTTGAAATGAAGCAAAC+AGG | - | chr1.2:16937807-16937826 | None:intergenic | 25.0% |
| !! | AACTTCATGCATGAAATTTT+GGG | - | chr1.2:16941686-16941705 | None:intergenic | 25.0% |
| !! | AATTTGAAATGAAGCAAACA+GGG | - | chr1.2:16937806-16937825 | None:intergenic | 25.0% |
| !! | ATATTTTACACGTCTTTCAA+AGG | + | chr1.2:16940508-16940527 | MS.gene83064:intron | 25.0% |
| !! | CACAAGATTTTAGATCTTAT+TGG | + | chr1.2:16942333-16942352 | MS.gene83064:CDS | 25.0% |
| !! | CTTTATACATAGAGAGTATA+AGG | + | chr1.2:16938513-16938532 | MS.gene83064:intron | 25.0% |
| !! | TAACTTCATGCATGAAATTT+TGG | - | chr1.2:16941687-16941706 | None:intergenic | 25.0% |
| !! | TAAGATCTAAAATCTTGTGA+CGG | - | chr1.2:16942332-16942351 | None:intergenic | 25.0% |
| !! | TCAAAATCTTTTGTATAGCA+AGG | + | chr1.2:16940881-16940900 | MS.gene83064:intron | 25.0% |
| !! | TTGTTTTCATATAGAGCTTA+TGG | - | chr1.2:16938478-16938497 | None:intergenic | 25.0% |
| !!! | AGGTTTTTTTCATTTTCTTC+TGG | + | chr1.2:16938754-16938773 | MS.gene83064:intron | 25.0% |
| !!! | ATTTTCTTCTGGAATTTTTC+TGG | + | chr1.2:16938765-16938784 | MS.gene83064:intron | 25.0% |
| !!! | CTGTTTTCAAGCTTATTTAA+TGG | + | chr1.2:16938386-16938405 | MS.gene83064:intron | 25.0% |
| !!! | GATACCCTTTTTTAATTTGT+AGG | + | chr1.2:16941464-16941483 | MS.gene83064:intron | 25.0% |
| !!! | GCATATTTTGGATATTTTGT+TGG | - | chr1.2:16939643-16939662 | None:intergenic | 25.0% |
| !!! | TAATGTCTACTTTTCTAAGT+AGG | - | chr1.2:16939507-16939526 | None:intergenic | 25.0% |
| !!! | TGATCTTTTAGTTGAGATTA+AGG | - | chr1.2:16941927-16941946 | None:intergenic | 25.0% |
| !!! | TTTTCTTCTGGAATTTTTCT+GGG | + | chr1.2:16938766-16938785 | MS.gene83064:intron | 25.0% |
| AAAACAGATAGTCGAAAGAA+AGG | - | chr1.2:16942097-16942116 | None:intergenic | 30.0% | |
| AAAATGCTGGACTTATCAAA+GGG | + | chr1.2:16941499-16941518 | MS.gene83064:CDS | 30.0% | |
| AAGAAATCGGAAACCAAATA+TGG | + | chr1.2:16940732-16940751 | MS.gene83064:intron | 30.0% | |
| AGACTGTTATAGATTGCTTA+CGG | + | chr1.2:16938339-16938358 | MS.gene83064:intron | 30.0% | |
| AGTGACTTAATTTATGCATC+TGG | - | chr1.2:16941766-16941785 | None:intergenic | 30.0% | |
| ATAGAGCTTATGGAAATAAG+TGG | - | chr1.2:16938468-16938487 | None:intergenic | 30.0% | |
| ATGATATGAAGAGGAAAAAG+AGG | + | chr1.2:16938815-16938834 | MS.gene83064:intron | 30.0% | |
| CATTTAACAACTTCTTACCT+CGG | - | chr1.2:16938179-16938198 | None:intergenic | 30.0% | |
| CCACTTATAAACACTTATTC+AGG | - | chr1.2:16939119-16939138 | None:intergenic | 30.0% | |
| CCTGAATAAGTGTTTATAAG+TGG | + | chr1.2:16939116-16939135 | MS.gene83064:intron | 30.0% | |
| CCTGAATAAGTGTTTATAGT+GGG | + | chr1.2:16939294-16939313 | MS.gene83064:intron | 30.0% | |
| CCTTCATAATATACGAGAAA+AGG | + | chr1.2:16939873-16939892 | MS.gene83064:intron | 30.0% | |
| CGATACTACCTAAATAGTTA+AGG | - | chr1.2:16938637-16938656 | None:intergenic | 30.0% | |
| CGATACTAGCTAAATAGTTA+AGG | + | chr1.2:16938976-16938995 | MS.gene83064:intron | 30.0% | |
| CTGAATAAGTGTTTATAGTG+GGG | + | chr1.2:16939295-16939314 | MS.gene83064:intron | 30.0% | |
| GAAAGGACAAAAATGTGTAA+TGG | + | chr1.2:16938903-16938922 | MS.gene83064:intron | 30.0% | |
| GAATAAGTGTTTATAAGTGG+GGG | + | chr1.2:16939119-16939138 | MS.gene83064:intron | 30.0% | |
| GGCAATAAATAGACTACAAA+TGG | - | chr1.2:16941100-16941119 | None:intergenic | 30.0% | |
| GTACTACTTTGTGTAAAGAT+GGG | + | chr1.2:16938050-16938069 | MS.gene83064:CDS | 30.0% | |
| GTATCATAAGCTATCAAAAC+CGG | - | chr1.2:16941621-16941640 | None:intergenic | 30.0% | |
| GTTGAAAATTTGGATGATCA+AGG | + | chr1.2:16938145-16938164 | MS.gene83064:CDS | 30.0% | |
| TAATCCCATCTAATGAGAAA+AGG | - | chr1.2:16940637-16940656 | None:intergenic | 30.0% | |
| TACATAAACACTTGTAGGAT+AGG | + | chr1.2:16939385-16939404 | MS.gene83064:intron | 30.0% | |
| TACTACTTTGTGTAAAGATG+GGG | + | chr1.2:16938051-16938070 | MS.gene83064:CDS | 30.0% | |
| TGAATAAGTGTTTATAGTGG+GGG | + | chr1.2:16939296-16939315 | MS.gene83064:intron | 30.0% | |
| TGACTCTTATGTTATATGCA+GGG | + | chr1.2:16942547-16942566 | MS.gene83064:intron | 30.0% | |
| TGATTGATACAATTGCAGTT+AGG | - | chr1.2:16941337-16941356 | None:intergenic | 30.0% | |
| TGTACTACTTTGTGTAAAGA+TGG | + | chr1.2:16938049-16938068 | MS.gene83064:CDS | 30.0% | |
| TTAATCTCTGATGTAAGACA+TGG | + | chr1.2:16941860-16941879 | MS.gene83064:intron | 30.0% | |
| TTACACAAAGTAGTACAAAG+CGG | - | chr1.2:16938046-16938065 | None:intergenic | 30.0% | |
| TTGACTCTTATGTTATATGC+AGG | + | chr1.2:16942546-16942565 | MS.gene83064:intron | 30.0% | |
| TTGGATAAGCAACTTAAGTT+TGG | - | chr1.2:16939431-16939450 | None:intergenic | 30.0% | |
| TTTACCACAAACCTCTAATA+AGG | + | chr1.2:16939905-16939924 | MS.gene83064:intron | 30.0% | |
| ! | AAGGTGCCTCTTATAATATT+TGG | - | chr1.2:16939693-16939712 | None:intergenic | 30.0% |
| ! | ACTAGGCTAAATTGCATTTT+TGG | + | chr1.2:16938609-16938628 | MS.gene83064:intron | 30.0% |
| ! | AGATAGCATTTTCAATTTCG+TGG | + | chr1.2:16939984-16940003 | MS.gene83064:intron | 30.0% |
| ! | ATAAGATGTGAAGCATTTGA+TGG | + | chr1.2:16940913-16940932 | MS.gene83064:intron | 30.0% |
| ! | CAAATACACCTTTCTTTTAC+AGG | + | chr1.2:16940955-16940974 | MS.gene83064:intron | 30.0% |
| ! | CCTTTTCTCGTATATTATGA+AGG | - | chr1.2:16939876-16939895 | None:intergenic | 30.0% |
| ! | GTCACTATTTTCTCAAAGTA+TGG | + | chr1.2:16941780-16941799 | MS.gene83064:intron | 30.0% |
| ! | GTTTGAGTTTAGGAACAATT+TGG | + | chr1.2:16937988-16938007 | MS.gene83064:CDS | 30.0% |
| ! | GTTTTGCACTAAATAACACA+TGG | - | chr1.2:16941135-16941154 | None:intergenic | 30.0% |
| ! | TAGTTTTTATGTTCAGAGTG+GGG | - | chr1.2:16938593-16938612 | None:intergenic | 30.0% |
| ! | TGAAGAAAACAGAAAGTACA+TGG | - | chr1.2:16940381-16940400 | None:intergenic | 30.0% |
| ! | TTTAATGTCCATTTTGCGTA+TGG | + | chr1.2:16939529-16939548 | MS.gene83064:intron | 30.0% |
| ! | TTTTGGTCCCTTAACTATTT+AGG | + | chr1.2:16938626-16938645 | MS.gene83064:intron | 30.0% |
| !! | CTAGTTTTTATGTTCAGAGT+GGG | - | chr1.2:16938594-16938613 | None:intergenic | 30.0% |
| !! | TAGGATTCAGGTTGAAAATT+TGG | + | chr1.2:16938135-16938154 | MS.gene83064:CDS | 30.0% |
| !! | TCGTATATTATGAAGGCATT+TGG | - | chr1.2:16939869-16939888 | None:intergenic | 30.0% |
| !! | TGTGTTATTTAGTGCAAAAC+TGG | + | chr1.2:16941135-16941154 | MS.gene83064:intron | 30.0% |
| !!! | AATGGCGTTTTTGATTTATG+TGG | - | chr1.2:16940661-16940680 | None:intergenic | 30.0% |
| AAATGCTGGACTTATCAAAG+GGG | + | chr1.2:16941500-16941519 | MS.gene83064:CDS | 35.0% | |
| AAGCTTCAACAAACTCTAAG+AGG | + | chr1.2:16937878-16937897 | MS.gene83064:CDS | 35.0% | |
| AATGAGGGTCTGTATTTGAA+TGG | - | chr1.2:16942160-16942179 | None:intergenic | 35.0% | |
| ACTCTTATGTTATATGCAGG+GGG | + | chr1.2:16942549-16942568 | MS.gene83064:intron | 35.0% | |
| AGATTTCAGTGTGCTAATGA+GGG | - | chr1.2:16942175-16942194 | None:intergenic | 35.0% | |
| AGCTGTACTATCCTTATTAG+AGG | - | chr1.2:16939919-16939938 | None:intergenic | 35.0% | |
| AGGTACTTCAAAAATTGCCT+GGG | + | chr1.2:16942069-16942088 | MS.gene83064:intron | 35.0% | |
| AGTATGGCACTATTTGTTTG+TGG | + | chr1.2:16941796-16941815 | MS.gene83064:intron | 35.0% | |
| CAAAATGCTGGACTTATCAA+AGG | + | chr1.2:16941498-16941517 | MS.gene83064:CDS | 35.0% | |
| CCAAATCAAGATGTAATGCA+TGG | - | chr1.2:16942576-16942595 | None:intergenic | 35.0% | |
| CCACTCTGAACATAAAAACT+AGG | + | chr1.2:16938592-16938611 | MS.gene83064:intron | 35.0% | |
| CCATGCATTACATCTTGATT+TGG | + | chr1.2:16942573-16942592 | MS.gene83064:CDS | 35.0% | |
| CCCACTATAAACACTTATTC+AGG | - | chr1.2:16939297-16939316 | None:intergenic | 35.0% | |
| CCTAAACTAGTAGATTCAAC+AGG | - | chr1.2:16941408-16941427 | None:intergenic | 35.0% | |
| CGCAGATTCCTATATTTGAT+GGG | + | chr1.2:16940093-16940112 | MS.gene83064:intron | 35.0% | |
| CTATCCTTATTAGAGGTTTG+TGG | - | chr1.2:16939912-16939931 | None:intergenic | 35.0% | |
| CTATTTAGCTAGTATCGCTT+TGG | - | chr1.2:16938973-16938992 | None:intergenic | 35.0% | |
| CTATTTAGGTAGTATCGCTT+TGG | + | chr1.2:16938640-16938659 | MS.gene83064:intron | 35.0% | |
| GAAAGGACCAAAATGTGTAA+TGG | - | chr1.2:16938710-16938729 | None:intergenic | 35.0% | |
| GACTCTTATGTTATATGCAG+GGG | + | chr1.2:16942548-16942567 | MS.gene83064:intron | 35.0% | |
| GCCTGAATAAGTGTTTATAG+TGG | + | chr1.2:16939293-16939312 | MS.gene83064:intron | 35.0% | |
| GTATAAGAGAGAGTGAGTTA+CGG | - | chr1.2:16937784-16937803 | None:intergenic | 35.0% | |
| GTTGGAATTTGGAAGCAATT+AGG | + | chr1.2:16942049-16942068 | MS.gene83064:intron | 35.0% | |
| TAACACAACCTCTCAAAACT+GGG | - | chr1.2:16939154-16939173 | None:intergenic | 35.0% | |
| TAGGTACTTCAAAAATTGCC+TGG | + | chr1.2:16942068-16942087 | MS.gene83064:intron | 35.0% | |
| TATAAGAGAGAGTGAGTTAC+GGG | - | chr1.2:16937783-16937802 | None:intergenic | 35.0% | |
| TATGTGACATAGGTCATGTT+TGG | - | chr1.2:16939450-16939469 | None:intergenic | 35.0% | |
| TCAAAAATCATACTCGTCTC+AGG | - | chr1.2:16942521-16942540 | None:intergenic | 35.0% | |
| TCGCTAAGTGAAATAAAGCA+AGG | - | chr1.2:16941224-16941243 | None:intergenic | 35.0% | |
| TGATACCACCTTAGAAATTG+TGG | - | chr1.2:16939184-16939203 | None:intergenic | 35.0% | |
| TTATGGCATAAACTTTCCAC+AGG | + | chr1.2:16940283-16940302 | MS.gene83064:CDS | 35.0% | |
| TTCTCACTTAAAGCTACCAA+AGG | + | chr1.2:16940700-16940719 | MS.gene83064:intron | 35.0% | |
| TTCTGTATGTGAGAGATGAT+TGG | + | chr1.2:16941981-16942000 | MS.gene83064:intron | 35.0% | |
| TTGATGGAGATGATATGAAG+AGG | + | chr1.2:16938806-16938825 | MS.gene83064:intron | 35.0% | |
| ! | ACAAACTCTAAGAGGAATTG+TGG | + | chr1.2:16937886-16937905 | MS.gene83064:CDS | 35.0% |
| ! | AGCAACCTTTTCTCATTAGA+TGG | + | chr1.2:16940629-16940648 | MS.gene83064:intron | 35.0% |
| ! | ATGACTTGATGATTCAAGTG+GGG | + | chr1.2:16938536-16938555 | MS.gene83064:intron | 35.0% |
| ! | CCTGTTGAATCTACTAGTTT+AGG | + | chr1.2:16941405-16941424 | MS.gene83064:intron | 35.0% |
| ! | CGGTTTTTGCAATAGTACAA+TGG | - | chr1.2:16940679-16940698 | None:intergenic | 35.0% |
| ! | CTTCTCTCCATTACACATTT+TGG | + | chr1.2:16938700-16938719 | MS.gene83064:intron | 35.0% |
| ! | GAATAAGTGTTTATAGTGGG+GGG | + | chr1.2:16939297-16939316 | MS.gene83064:intron | 35.0% |
| ! | GATGACTTGATGATTCAAGT+GGG | + | chr1.2:16938535-16938554 | MS.gene83064:intron | 35.0% |
| ! | GATTCCTATATTTGATGGGT+CGG | + | chr1.2:16940097-16940116 | MS.gene83064:intron | 35.0% |
| ! | GCAACCTTTTCTCATTAGAT+GGG | + | chr1.2:16940630-16940649 | MS.gene83064:intron | 35.0% |
| ! | GTGTAATGGAGAGAAGTTAA+GGG | + | chr1.2:16938917-16938936 | MS.gene83064:intron | 35.0% |
| ! | TCTTGATTTCTGCAAGGTTT+TGG | + | chr1.2:16939666-16939685 | MS.gene83064:intron | 35.0% |
| ! | TGTGTAATGGAGAGAAGTTA+AGG | + | chr1.2:16938916-16938935 | MS.gene83064:intron | 35.0% |
| ! | TGTGTAATGGAGAGAAGTTA+AGG | - | chr1.2:16938935-16938916 | None:intergenic | 35.0% |
| ! | TTCTTTTGCAGTGCTAGTAA+AGG | + | chr1.2:16942267-16942286 | MS.gene83064:intron | 35.0% |
| ! | TTTGCTCAGTTTGGTAATCA+AGG | + | chr1.2:16942369-16942388 | MS.gene83064:CDS | 35.0% |
| !! | AAAGCAAGGTTTTGTACATC+TGG | - | chr1.2:16941210-16941229 | None:intergenic | 35.0% |
| !! | ATGATTGGTAGTGTAAGAGT+AGG | + | chr1.2:16941996-16942015 | MS.gene83064:intron | 35.0% |
| !! | ATTTTGATGAAACAGAGCCT+AGG | - | chr1.2:16939962-16939981 | None:intergenic | 35.0% |
| !! | CCTAGTTTTTATGTTCAGAG+TGG | - | chr1.2:16938595-16938614 | None:intergenic | 35.0% |
| !! | GGTTGATAATTGTAGGATTC+AGG | + | chr1.2:16938123-16938142 | MS.gene83064:CDS | 35.0% |
| !! | TGGTAGCTTTAAGTGAGAAT+CGG | - | chr1.2:16940699-16940718 | None:intergenic | 35.0% |
| !! | TTCTTGTTGTTGAAGGTTGA+TGG | + | chr1.2:16938790-16938809 | MS.gene83064:intron | 35.0% |
| !! | TTGCTTTATTTCACTTAGCG+AGG | + | chr1.2:16941223-16941242 | MS.gene83064:intron | 35.0% |
| AACCTCCTCATAAATGCAGA+AGG | - | chr1.2:16941062-16941081 | None:intergenic | 40.0% | |
| AACCTTCTGCATTTATGAGG+AGG | + | chr1.2:16941057-16941076 | MS.gene83064:CDS | 40.0% | |
| AACTTTCCACAGGTAAGGAT+AGG | + | chr1.2:16940293-16940312 | MS.gene83064:intron | 40.0% | |
| AAGCAAATACCTGCACACAA+TGG | - | chr1.2:16941541-16941560 | None:intergenic | 40.0% | |
| AAGGGAATCTCATTGCATTC+GGG | + | chr1.2:16937914-16937933 | MS.gene83064:CDS | 40.0% | |
| AATGCTGGACTTATCAAAGG+GGG | + | chr1.2:16941501-16941520 | MS.gene83064:CDS | 40.0% | |
| ACCACCTTAGAAATTGTGGA+CGG | - | chr1.2:16939180-16939199 | None:intergenic | 40.0% | |
| ACTTTCATATCCACTCTCCT+AGG | + | chr1.2:16939942-16939961 | MS.gene83064:intron | 40.0% | |
| AGAGTTAGGCTAGAGTTAGT+TGG | + | chr1.2:16942031-16942050 | MS.gene83064:intron | 40.0% | |
| AGTAAAAGGAGGAGAACCAA+AGG | - | chr1.2:16942433-16942452 | None:intergenic | 40.0% | |
| AGTCAAAGAGTGGAGTGATA+CGG | + | chr1.2:16938560-16938579 | MS.gene83064:intron | 40.0% | |
| CACAAAGAGATCGTGAGAAT+GGG | - | chr1.2:16937849-16937868 | None:intergenic | 40.0% | |
| CAGAACCTTCTGCATTTATG+AGG | + | chr1.2:16941054-16941073 | MS.gene83064:CDS | 40.0% | |
| CAGATTTCAGTGTGCTAATG+AGG | - | chr1.2:16942176-16942195 | None:intergenic | 40.0% | |
| CCTTCAGAGCTGTAATCAAT+TGG | + | chr1.2:16941301-16941320 | MS.gene83064:intron | 40.0% | |
| CTAACACAACCTCTCAAAAC+TGG | - | chr1.2:16939155-16939174 | None:intergenic | 40.0% | |
| CTCATAAATGCAGAAGGTTC+TGG | - | chr1.2:16941056-16941075 | None:intergenic | 40.0% | |
| CTCTAAACCAACTTCTTCCA+AGG | - | chr1.2:16940141-16940160 | None:intergenic | 40.0% | |
| CTCTTATGTTATATGCAGGG+GGG | + | chr1.2:16942550-16942569 | MS.gene83064:intron | 40.0% | |
| CTTACACAACCTCACAAAAC+CGG | - | chr1.2:16939341-16939360 | None:intergenic | 40.0% | |
| CTTCAATACACTATCCCTAC+TGG | + | chr1.2:16940396-16940415 | MS.gene83064:intron | 40.0% | |
| GAAGGGAATCTCATTGCATT+CGG | + | chr1.2:16937913-16937932 | MS.gene83064:CDS | 40.0% | |
| GAAGTGGTTGGAGTAACTTA+TGG | + | chr1.2:16940266-16940285 | MS.gene83064:CDS | 40.0% | |
| GAGATAGCAACTGATGTTGA+TGG | + | chr1.2:16940158-16940177 | MS.gene83064:CDS | 40.0% | |
| GAGTTACAAACACATTCACG+TGG | - | chr1.2:16941176-16941195 | None:intergenic | 40.0% | |
| GATCATCAAAACTCGTCACA+TGG | + | chr1.2:16937754-16937773 | MS.gene83064:CDS | 40.0% | |
| GCATAAACTTTCCACAGGTA+AGG | + | chr1.2:16940288-16940307 | MS.gene83064:intron | 40.0% | |
| GCGCAGATTCCTATATTTGA+TGG | + | chr1.2:16940092-16940111 | MS.gene83064:intron | 40.0% | |
| GGCTAGAGTTAGTTGGAATT+TGG | + | chr1.2:16942038-16942057 | MS.gene83064:intron | 40.0% | |
| GTTGAGCAAATGCAAAATGC+TGG | + | chr1.2:16941486-16941505 | MS.gene83064:CDS | 40.0% | |
| TAGAAAATGCCATTGTGTGC+AGG | + | chr1.2:16941529-16941548 | MS.gene83064:CDS | 40.0% | |
| TATCAACCTATCCTTACCTG+TGG | - | chr1.2:16940302-16940321 | None:intergenic | 40.0% | |
| TATGTTAAAGAGTCCCACGT+CGG | + | chr1.2:16939082-16939101 | MS.gene83064:intron | 40.0% | |
| TCATTCCTCCAAACATGTAC+CGG | - | chr1.2:16940221-16940240 | None:intergenic | 40.0% | |
| TCATTGTAGTCACTGTAGAG+AGG | + | chr1.2:16942126-16942145 | MS.gene83064:intron | 40.0% | |
| TCTGGACAAAGCTATTTGCA+TGG | - | chr1.2:16941038-16941057 | None:intergenic | 40.0% | |
| TGAATGAACCGGTACATGTT+TGG | + | chr1.2:16940210-16940229 | MS.gene83064:CDS | 40.0% | |
| TGAGCAAATTCAACAGAAGC+AGG | - | chr1.2:16938016-16938035 | None:intergenic | 40.0% | |
| TGCACATCTTGATTTCTGCA+AGG | + | chr1.2:16939660-16939679 | MS.gene83064:intron | 40.0% | |
| TTTGCAGTGCTAGTAAAGGT+TGG | + | chr1.2:16942271-16942290 | MS.gene83064:intron | 40.0% | |
| ! | AAGGAAGGTGGTTTGAGTTT+AGG | + | chr1.2:16937978-16937997 | MS.gene83064:CDS | 40.0% |
| ! | CCAATTGATTACAGCTCTGA+AGG | - | chr1.2:16941304-16941323 | None:intergenic | 40.0% |
| ! | GAGCTGTAATCAATTGGTTC+TGG | + | chr1.2:16941307-16941326 | MS.gene83064:intron | 40.0% |
| ! | GCTTACAAGGTTTTTGCCTT+TGG | + | chr1.2:16942414-16942433 | MS.gene83064:intron | 40.0% |
| ! | GGATGACTTGATGATTCAAG+TGG | + | chr1.2:16938534-16938553 | MS.gene83064:intron | 40.0% |
| ! | GTGAGAATGGGTGTGATTTT+GGG | - | chr1.2:16937837-16937856 | None:intergenic | 40.0% |
| ! | TATATTTGATGGGTCGGCTA+GGG | + | chr1.2:16940103-16940122 | MS.gene83064:CDS | 40.0% |
| ! | TCTAAAATCTTGTGACGGCA+TGG | - | chr1.2:16942327-16942346 | None:intergenic | 40.0% |
| ! | TGACTTGATGATTCAAGTGG+GGG | + | chr1.2:16938537-16938556 | MS.gene83064:intron | 40.0% |
| ! | TGCTTCTGTTGAATTTGCTC+AGG | + | chr1.2:16938015-16938034 | MS.gene83064:CDS | 40.0% |
| !! | AAGAGCATCCATACGCAAAA+TGG | - | chr1.2:16939540-16939559 | None:intergenic | 40.0% |
| !! | AGCTCTGAAGGCTGAAAATT+TGG | - | chr1.2:16941292-16941311 | None:intergenic | 40.0% |
| !! | GCTCTGAAGGCTGAAAATTT+GGG | - | chr1.2:16941291-16941310 | None:intergenic | 40.0% |
| !! | GTTCTGGGGTTGATAATTGT+AGG | + | chr1.2:16938116-16938135 | MS.gene83064:CDS | 40.0% |
| !! | TCTGGGATTCTTGTTGTTGA+AGG | + | chr1.2:16938783-16938802 | MS.gene83064:intron | 40.0% |
| !!! | CAGTTTTGAGAGGTTGTGTT+AGG | + | chr1.2:16939153-16939172 | MS.gene83064:intron | 40.0% |
| !!! | GACAACTCTAGAGTTTTCGT+AGG | + | chr1.2:16941834-16941853 | MS.gene83064:intron | 40.0% |
| AAAGTTCCGATTCTCACGCA+AGG | - | chr1.2:16940811-16940830 | None:intergenic | 45.0% | |
| AACACATGGCAACACTAACG+AGG | - | chr1.2:16941121-16941140 | None:intergenic | 45.0% | |
| AACAGGCAAGAACTAACGAG+AGG | - | chr1.2:16941391-16941410 | None:intergenic | 45.0% | |
| AAGTTCCGATTCTCACGCAA+GGG | - | chr1.2:16940810-16940829 | None:intergenic | 45.0% | |
| AATCTCATTGCATTCGGGGA+AGG | + | chr1.2:16937919-16937938 | MS.gene83064:CDS | 45.0% | |
| ACAGGCAAGAACTAACGAGA+GGG | - | chr1.2:16941390-16941409 | None:intergenic | 45.0% | |
| ACATAGCTCGGCATTAGGAA+CGG | - | chr1.2:16941586-16941605 | None:intergenic | 45.0% | |
| ACGCAAGGGTAATCATGATG+GGG | - | chr1.2:16940796-16940815 | None:intergenic | 45.0% | |
| AGATTGTGTCCTGGATTTGC+AGG | + | chr1.2:16937953-16937972 | MS.gene83064:CDS | 45.0% | |
| AGCTCCACATGTGAATGAAC+CGG | + | chr1.2:16940199-16940218 | MS.gene83064:CDS | 45.0% | |
| AGGGAATCTCATTGCATTCG+GGG | + | chr1.2:16937915-16937934 | MS.gene83064:CDS | 45.0% | |
| ATGAACCGGTACATGTTTGG+AGG | + | chr1.2:16940213-16940232 | MS.gene83064:CDS | 45.0% | |
| CACGCAAGGGTAATCATGAT+GGG | - | chr1.2:16940797-16940816 | None:intergenic | 45.0% | |
| CCACCTTAGAAATTGTGGAC+GGG | - | chr1.2:16939179-16939198 | None:intergenic | 45.0% | |
| CTAGCCGACCCATCAAATAT+AGG | - | chr1.2:16940104-16940123 | None:intergenic | 45.0% | |
| CTATCACATAGCTCGGCATT+AGG | - | chr1.2:16941591-16941610 | None:intergenic | 45.0% | |
| CTTTGTGTAAAGATGGGGTG+AGG | + | chr1.2:16938056-16938075 | MS.gene83064:CDS | 45.0% | |
| GATTACCCTTGCGTGAGAAT+CGG | + | chr1.2:16940802-16940821 | MS.gene83064:intron | 45.0% | |
| GCACAAAGAGATCGTGAGAA+TGG | - | chr1.2:16937850-16937869 | None:intergenic | 45.0% | |
| GCATTTCCTTCAGAAGTGGT+TGG | + | chr1.2:16940254-16940273 | MS.gene83064:CDS | 45.0% | |
| GGAATCTGCGCATGAAATCA+AGG | - | chr1.2:16940083-16940102 | None:intergenic | 45.0% | |
| GGAGATGAGAGAGAAGAGTT+AGG | + | chr1.2:16942017-16942036 | MS.gene83064:intron | 45.0% | |
| GGCACACATAGTAGCTTACA+AGG | + | chr1.2:16942401-16942420 | MS.gene83064:CDS | 45.0% | |
| GGTGTTAAAGAGTCCCACAT+CGG | + | chr1.2:16939260-16939279 | MS.gene83064:intron | 45.0% | |
| GGTTCATCACTGAAACGAAG+AGG | - | chr1.2:16942306-16942325 | None:intergenic | 45.0% | |
| GTAAAGATGGGGTGAGGATT+AGG | + | chr1.2:16938062-16938081 | MS.gene83064:CDS | 45.0% | |
| GTTACTCCAACCACTTCTGA+AGG | - | chr1.2:16940263-16940282 | None:intergenic | 45.0% | |
| TAAGCTACTATGTGTGCCAC+TGG | - | chr1.2:16942399-16942418 | None:intergenic | 45.0% | |
| TAGTCGAAAGAAAGGAACCC+AGG | - | chr1.2:16942089-16942108 | None:intergenic | 45.0% | |
| TCAACTCAAGTAGCAGCTTG+TGG | - | chr1.2:16940571-16940590 | None:intergenic | 45.0% | |
| TCACGATCTCTTTGTGCAGA+CGG | + | chr1.2:16937853-16937872 | MS.gene83064:intron | 45.0% | |
| TCACGCAAGGGTAATCATGA+TGG | - | chr1.2:16940798-16940817 | None:intergenic | 45.0% | |
| TCATCACTGAAACGAAGAGG+TGG | - | chr1.2:16942303-16942322 | None:intergenic | 45.0% | |
| TCGCTAGCTATCACATAGCT+CGG | - | chr1.2:16941598-16941617 | None:intergenic | 45.0% | |
| TGCAGCATTTCCTTCAGAAG+TGG | + | chr1.2:16940250-16940269 | MS.gene83064:CDS | 45.0% | |
| TGCAGGTGCCTGTAAAAGAA+AGG | - | chr1.2:16940966-16940985 | None:intergenic | 45.0% | |
| TTAAAGAGTCCCACATCGGT+TGG | + | chr1.2:16939264-16939283 | MS.gene83064:intron | 45.0% | |
| ! | AAGCTACTATGTGTGCCACT+GGG | - | chr1.2:16942398-16942417 | None:intergenic | 45.0% |
| ! | ACAAGCTGCTACTTGAGTTG+AGG | + | chr1.2:16940570-16940589 | MS.gene83064:intron | 45.0% |
| ! | CGTGAGAATGGGTGTGATTT+TGG | - | chr1.2:16937838-16937857 | None:intergenic | 45.0% |
| ! | CTATATTTGATGGGTCGGCT+AGG | + | chr1.2:16940102-16940121 | MS.gene83064:CDS | 45.0% |
| ! | CTCTAAGAGGAATTGTGGAG+CGG | + | chr1.2:16937891-16937910 | MS.gene83064:CDS | 45.0% |
| ! | CTTTTACAGGCACCTGCAAT+TGG | + | chr1.2:16940968-16940987 | MS.gene83064:intron | 45.0% |
| ! | TAAAGAGTCCCACATCGGTT+GGG | + | chr1.2:16939265-16939284 | MS.gene83064:intron | 45.0% |
| !! | AAAAAAGGGTATCCACCCAG+TGG | - | chr1.2:16941457-16941476 | None:intergenic | 45.0% |
| !! | CGGTTTTGTGAGGTTGTGTA+AGG | + | chr1.2:16939339-16939358 | MS.gene83064:intron | 45.0% |
| !! | TGTACCGGTTCATTCACATG+TGG | - | chr1.2:16940206-16940225 | None:intergenic | 45.0% |
| !!! | AATCGTCACCCAGTTTTGAG+AGG | + | chr1.2:16939143-16939162 | MS.gene83064:intron | 45.0% |
| AAGAGGAATTGTGGAGCGGA+AGG | + | chr1.2:16937895-16937914 | MS.gene83064:CDS | 50.0% | |
| ACCACCTGCTATCAGGTTTC+CGG | + | chr1.2:16939227-16939246 | MS.gene83064:intron | 50.0% | |
| ACGATCTCTTTGTGCAGACG+GGG | + | chr1.2:16937855-16937874 | MS.gene83064:intron | 50.0% | |
| AGAGGAATTGTGGAGCGGAA+GGG | + | chr1.2:16937896-16937915 | MS.gene83064:CDS | 50.0% | |
| AGGCCCGTCCACAATTTCTA+AGG | + | chr1.2:16939173-16939192 | MS.gene83064:intron | 50.0% | |
| CAAAGAGTGGAGTGATACGG+AGG | + | chr1.2:16938563-16938582 | MS.gene83064:intron | 50.0% | |
| CACGATCTCTTTGTGCAGAC+GGG | + | chr1.2:16937854-16937873 | MS.gene83064:intron | 50.0% | |
| CATTTGCTTTCCGCGTTGGA+GGG | + | chr1.2:16938094-16938113 | MS.gene83064:CDS | 50.0% | |
| CTCTCGCTGTTTGCTCAGTT+TGG | + | chr1.2:16942360-16942379 | MS.gene83064:CDS | 50.0% | |
| CTGGATTTGCAGGTCAAGGA+AGG | + | chr1.2:16937963-16937982 | MS.gene83064:CDS | 50.0% | |
| CTTCCTTGACCTGCAAATCC+AGG | - | chr1.2:16937965-16937984 | None:intergenic | 50.0% | |
| GAAATCCTCACCTCACAAGC+CGG | + | chr1.2:16939319-16939338 | MS.gene83064:intron | 50.0% | |
| GATACCATGCAACCACCACT+GGG | + | chr1.2:16941439-16941458 | MS.gene83064:intron | 50.0% | |
| GATTTGCAGGTCAAGGAAGG+TGG | + | chr1.2:16937966-16937985 | MS.gene83064:CDS | 50.0% | |
| GCTATGTGATAGCTAGCGAC+CGG | + | chr1.2:16941599-16941618 | MS.gene83064:intron | 50.0% | |
| TGAAACAGAGCCTAGGAGAG+TGG | - | chr1.2:16939955-16939974 | None:intergenic | 50.0% | |
| TGATACCATGCAACCACCAC+TGG | + | chr1.2:16941438-16941457 | MS.gene83064:intron | 50.0% | |
| TGGTAATCAAGGACTCCCAG+TGG | + | chr1.2:16942380-16942399 | MS.gene83064:CDS | 50.0% | |
| TGTCCTGGATTTGCAGGTCA+AGG | + | chr1.2:16937959-16937978 | MS.gene83064:CDS | 50.0% | |
| ! | ATACTCGTCTCAGGTTGCAC+AGG | - | chr1.2:16942512-16942531 | None:intergenic | 50.0% |
| ! | CCCGTCCACAATTTCTAAGG+TGG | + | chr1.2:16939176-16939195 | MS.gene83064:intron | 50.0% |
| ! | TGATCAAGGTGATGATGCCG+AGG | + | chr1.2:16938159-16938178 | MS.gene83064:CDS | 50.0% |
| AACCACTGGCAGCCAATTGC+AGG | - | chr1.2:16940983-16941002 | None:intergenic | 55.0% | |
| AGGGGGTTGTCGAAAACCAC+TGG | - | chr1.2:16940997-16941016 | None:intergenic | 55.0% | |
| CAAGTGGGGGAGTCAAAGAG+TGG | + | chr1.2:16938550-16938569 | MS.gene83064:intron | 55.0% | |
| CCACCTGCTATCAGGTTTCC+GGG | + | chr1.2:16939228-16939247 | MS.gene83064:intron | 55.0% | |
| CCTGATAGCAGGTGGTCCAA+CGG | - | chr1.2:16939223-16939242 | None:intergenic | 55.0% | |
| CTGATAGCAGGTGGTCCAAC+GGG | - | chr1.2:16939222-16939241 | None:intergenic | 55.0% | |
| GCATTTGCTTTCCGCGTTGG+AGG | + | chr1.2:16938093-16938112 | MS.gene83064:CDS | 55.0% | |
| GTGGCAGCCTTGGAAGAAGT+TGG | + | chr1.2:16940131-16940150 | MS.gene83064:CDS | 55.0% | |
| TCGACGGTGAGATTGTGTCC+TGG | + | chr1.2:16937944-16937963 | MS.gene83064:CDS | 55.0% | |
| TGGGGTGAGGATTAGGACTG+TGG | + | chr1.2:16938069-16938088 | MS.gene83064:CDS | 55.0% | |
| TTTAACACCCCTCTCACGCC+CGG | - | chr1.2:16939249-16939268 | None:intergenic | 55.0% | |
| TTTCCGCGTTGGAGGGTTCT+GGG | + | chr1.2:16938101-16938120 | MS.gene83064:CDS | 55.0% | |
| ! | ATTTGGCACGCCGACTGATG+GGG | + | chr1.2:16942590-16942609 | MS.gene83064:CDS | 55.0% |
| ! | GATTTGGCACGCCGACTGAT+GGG | + | chr1.2:16942589-16942608 | MS.gene83064:CDS | 55.0% |
| ! | GGAGCATTTGCTTTCCGCGT+TGG | + | chr1.2:16938090-16938109 | MS.gene83064:CDS | 55.0% |
| ! | TGATGGGTCGGCTAGGGAAT+GGG | + | chr1.2:16940109-16940128 | MS.gene83064:CDS | 55.0% |
| ! | TGATTTGGCACGCCGACTGA+TGG | + | chr1.2:16942588-16942607 | MS.gene83064:CDS | 55.0% |
| ! | TTGATGGGTCGGCTAGGGAA+TGG | + | chr1.2:16940108-16940127 | MS.gene83064:CDS | 55.0% |
| !! | AAAGGGTATCCACCCAGTGG+TGG | - | chr1.2:16941454-16941473 | None:intergenic | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | - | chr1.2:16939327-16939346 | None:intergenic | 55.0% |
| !! | CCTCACAAAACCGGCTTGTG+AGG | - | chr1.2:16939332-16939351 | None:intergenic | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+AGG | + | chr1.2:16939329-16939348 | MS.gene83064:intron | 55.0% |
| !! | GCATTCGGGGAAGGTATCGA+CGG | + | chr1.2:16937928-16937947 | MS.gene83064:CDS | 55.0% |
| AACCCCAGAACCCTCCAACG+CGG | - | chr1.2:16938107-16938126 | None:intergenic | 60.0% | |
| ACCATGCAACCACCACTGGG+TGG | + | chr1.2:16941442-16941461 | MS.gene83064:intron | 60.0% | |
| ACGCCCGGAAACCTGATAGC+AGG | - | chr1.2:16939234-16939253 | None:intergenic | 60.0% | |
| AGGCCATCTCCCAACCGATG+TGG | - | chr1.2:16939277-16939296 | None:intergenic | 60.0% | |
| AGGCCATCTCTCAACCGACG+TGG | - | chr1.2:16939099-16939118 | None:intergenic | 60.0% | |
| ATCAGGTTTCCGGGCGTGAG+AGG | + | chr1.2:16939237-16939256 | MS.gene83064:intron | 60.0% | |
| CACCTGCAATTGGCTGCCAG+TGG | + | chr1.2:16940978-16940997 | MS.gene83064:CDS | 60.0% | |
| CCCGGAAACCTGATAGCAGG+TGG | - | chr1.2:16939231-16939250 | None:intergenic | 60.0% | |
| CCGTTGGACCACCTGCTATC+AGG | + | chr1.2:16939220-16939239 | MS.gene83064:intron | 60.0% | |
| CTTTCCGCGTTGGAGGGTTC+TGG | + | chr1.2:16938100-16938119 | MS.gene83064:CDS | 60.0% | |
| GGCCATCTCCCAACCGATGT+GGG | - | chr1.2:16939276-16939295 | None:intergenic | 60.0% | |
| GGCCATCTCTCAACCGACGT+GGG | - | chr1.2:16939098-16939117 | None:intergenic | 60.0% | |
| TAGGGAATGGGTGGCAGCCT+TGG | + | chr1.2:16940121-16940140 | MS.gene83064:CDS | 60.0% | |
| TCAGGTTTCCGGGCGTGAGA+GGG | + | chr1.2:16939238-16939257 | MS.gene83064:intron | 60.0% | |
| TCCACCCAGTGGTGGTTGCA+TGG | - | chr1.2:16941446-16941465 | None:intergenic | 60.0% | |
| TTCCGCGTTGGAGGGTTCTG+GGG | + | chr1.2:16938102-16938121 | MS.gene83064:CDS | 60.0% | |
| ! | GTCCCACATCGGTTGGGAGA+TGG | + | chr1.2:16939271-16939290 | MS.gene83064:intron | 60.0% |
| ! | GTCCCACGTCGGTTGAGAGA+TGG | + | chr1.2:16939093-16939112 | MS.gene83064:intron | 60.0% |
| CAGGTTTCCGGGCGTGAGAG+GGG | + | chr1.2:16939239-16939258 | MS.gene83064:intron | 65.0% | |
| GAGCCTCCTCCAAGACCCGT+TGG | + | chr1.2:16939204-16939223 | MS.gene83064:intron | 65.0% | |
| GCAGGTGGTCCAACGGGTCT+TGG | - | chr1.2:16939216-16939235 | None:intergenic | 65.0% | |
| GGTCCAACGGGTCTTGGAGG+AGG | - | chr1.2:16939210-16939229 | None:intergenic | 65.0% | |
| GGTGGTCCAACGGGTCTTGG+AGG | - | chr1.2:16939213-16939232 | None:intergenic | 65.0% | |
| TGGGTCGGCTAGGGAATGGG+TGG | + | chr1.2:16940112-16940131 | MS.gene83064:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 16937732 | 16942621 | 16937732 | ID=MS.gene83064 |
| chr1.2 | mRNA | 16937732 | 16942621 | 16937732 | ID=MS.gene83064.t1;Parent=MS.gene83064 |
| chr1.2 | exon | 16937732 | 16937782 | 16937732 | ID=MS.gene83064.t1.exon1;Parent=MS.gene83064.t1 |
| chr1.2 | CDS | 16937732 | 16937782 | 16937732 | ID=cds.MS.gene83064.t1;Parent=MS.gene83064.t1 |
| chr1.2 | exon | 16937872 | 16938180 | 16937872 | ID=MS.gene83064.t1.exon2;Parent=MS.gene83064.t1 |
| chr1.2 | CDS | 16937872 | 16938180 | 16937872 | ID=cds.MS.gene83064.t1;Parent=MS.gene83064.t1 |
| chr1.2 | exon | 16940098 | 16940304 | 16940098 | ID=MS.gene83064.t1.exon3;Parent=MS.gene83064.t1 |
| chr1.2 | CDS | 16940098 | 16940304 | 16940098 | ID=cds.MS.gene83064.t1;Parent=MS.gene83064.t1 |
| chr1.2 | exon | 16940977 | 16941078 | 16940977 | ID=MS.gene83064.t1.exon4;Parent=MS.gene83064.t1 |
| chr1.2 | CDS | 16940977 | 16941078 | 16940977 | ID=cds.MS.gene83064.t1;Parent=MS.gene83064.t1 |
| chr1.2 | exon | 16941486 | 16941550 | 16941486 | ID=MS.gene83064.t1.exon5;Parent=MS.gene83064.t1 |
| chr1.2 | CDS | 16941486 | 16941550 | 16941486 | ID=cds.MS.gene83064.t1;Parent=MS.gene83064.t1 |
| chr1.2 | exon | 16942278 | 16942422 | 16942278 | ID=MS.gene83064.t1.exon6;Parent=MS.gene83064.t1 |
| chr1.2 | CDS | 16942278 | 16942422 | 16942278 | ID=cds.MS.gene83064.t1;Parent=MS.gene83064.t1 |
| chr1.2 | exon | 16942568 | 16942621 | 16942568 | ID=MS.gene83064.t1.exon7;Parent=MS.gene83064.t1 |
| chr1.2 | CDS | 16942568 | 16942621 | 16942568 | ID=cds.MS.gene83064.t1;Parent=MS.gene83064.t1 |
| Gene Sequence |
| Protein sequence |
