Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98976.t1 | XP_013466579.1 | 95.5 | 310 | 14 | 0 | 1 | 310 | 1 | 310 | 1.30E-172 | 615.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98976.t1 | F4IAT8 | 66.4 | 298 | 100 | 0 | 9 | 306 | 26 | 323 | 3.1e-114 | 412.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98976.t1 | A0A072VG88 | 95.5 | 310 | 14 | 0 | 1 | 310 | 1 | 310 | 9.5e-173 | 615.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98976 | MS.gene026526 | PPI |
| MS.gene039144 | MS.gene98976 | PPI |
| MS.gene98976 | MS.gene002655 | PPI |
| MS.gene98976 | MS.gene25182 | PPI |
| MS.gene98976 | MS.gene004332 | PPI |
| MS.gene98976 | MS.gene83064 | PPI |
| MS.gene98976 | MS.gene063405 | PPI |
| MS.gene002653 | MS.gene98976 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98976.t1 | MTR_1g032430 | 95.484 | 310 | 14 | 0 | 1 | 310 | 1 | 310 | 0.0 | 615 |
| MS.gene98976.t1 | MTR_1g032430 | 94.170 | 223 | 13 | 0 | 1 | 223 | 1 | 223 | 5.02e-157 | 437 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98976.t1 | AT1G24793 | 66.443 | 298 | 100 | 0 | 9 | 306 | 26 | 323 | 7.61e-145 | 411 |
| MS.gene98976.t1 | AT1G25054 | 66.443 | 298 | 100 | 0 | 9 | 306 | 26 | 323 | 7.61e-145 | 411 |
| MS.gene98976.t1 | AT1G25145 | 66.443 | 298 | 100 | 0 | 9 | 306 | 26 | 323 | 7.61e-145 | 411 |
| MS.gene98976.t1 | AT1G25210 | 66.443 | 298 | 100 | 0 | 9 | 306 | 26 | 323 | 7.61e-145 | 411 |
| MS.gene98976.t1 | AT1G24793 | 61.842 | 228 | 87 | 0 | 9 | 236 | 26 | 253 | 3.57e-99 | 292 |
| MS.gene98976.t1 | AT1G25210 | 61.842 | 228 | 87 | 0 | 9 | 236 | 26 | 253 | 3.57e-99 | 292 |
Find 94 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTGCATTGGAAGGTTC+TGG | 0.118604 | 1.4:+16983042 | MS.gene98976:CDS |
| TAGGATTCAGATTGAAAATT+TGG | 0.152736 | 1.4:+16983077 | MS.gene98976:CDS |
| CTCATAAATGCAGAAGGTTC+TGG | 0.297545 | 1.4:-16985993 | None:intergenic |
| AAGGAAGGTGGTTTGAGTTT+AGG | 0.298029 | 1.4:+16982920 | MS.gene98976:CDS |
| CCATGCATTACATCTTGATT+TGG | 0.320373 | 1.4:+16987512 | MS.gene98976:CDS |
| AAGGGAGTCTCATTGCATTC+AGG | 0.320660 | 1.4:+16982856 | MS.gene98976:CDS |
| CTCTCGCTGTTTGCTCAGTT+TGG | 0.325357 | 1.4:+16987299 | MS.gene98976:CDS |
| GTTTGAGTTTAGGAACAATT+TGG | 0.329929 | 1.4:+16982930 | MS.gene98976:CDS |
| TTTCTGCATTGGAAGGTTCT+GGG | 0.332481 | 1.4:+16983043 | MS.gene98976:CDS |
| GTAAAGATGGGGTGAGGATT+AGG | 0.358641 | 1.4:+16983004 | MS.gene98976:CDS |
| GAGATAGCAACTGATGTTGA+TGG | 0.375553 | 1.4:+16985098 | MS.gene98976:CDS |
| TGCTTCTGTTGAATTTGCTC+AGG | 0.378400 | 1.4:+16982957 | MS.gene98976:CDS |
| AACCACTGGCAGCCAATTGC+TGG | 0.386445 | 1.4:-16985920 | None:intergenic |
| GCGCAGATTCCTATATTTGA+TGG | 0.390435 | 1.4:+16985032 | MS.gene98976:intron |
| AGATTGTGTCCTGGATTTGC+AGG | 0.390889 | 1.4:+16982895 | MS.gene98976:CDS |
| TGTACTACTTTGTGTAAAGA+TGG | 0.393389 | 1.4:+16982991 | MS.gene98976:CDS |
| GAAGTGGTTGGAGTAACTTA+TGG | 0.399861 | 1.4:+16985206 | MS.gene98976:CDS |
| GGAGCATTTGCTTTCTGCAT+TGG | 0.417815 | 1.4:+16983032 | MS.gene98976:CDS |
| TAGGGAATGGGTGGCAGCCT+TGG | 0.431192 | 1.4:+16985061 | MS.gene98976:CDS |
| TGATGGGTCGGCTAGGGAAT+GGG | 0.431195 | 1.4:+16985049 | MS.gene98976:CDS |
| GTTCTGGGGTTGATAATTGT+AGG | 0.431213 | 1.4:+16983058 | MS.gene98976:CDS |
| TTTGCTCAGTTTGGTAATCA+AGG | 0.435061 | 1.4:+16987308 | MS.gene98976:CDS |
| GATTTGGCACGCCGACTGAT+GGG | 0.453180 | 1.4:+16987528 | MS.gene98976:CDS |
| CATTTGCTTTCTGCATTGGA+AGG | 0.456709 | 1.4:+16983036 | MS.gene98976:CDS |
| GAATAAAACAAATCATCAAA+GGG | 0.457717 | 1.4:-16985953 | None:intergenic |
| TGAATGAACCGGTACATGTT+TGG | 0.458151 | 1.4:+16985150 | MS.gene98976:CDS |
| ATTGAAAATTTGGATGATCA+AGG | 0.461008 | 1.4:+16983087 | MS.gene98976:CDS |
| CTAGCCGACCCATCAAATAT+AGG | 0.461299 | 1.4:-16985041 | None:intergenic |
| CAGAACCTTCTGCATTTATG+AGG | 0.462949 | 1.4:+16985994 | MS.gene98976:CDS |
| TTGATGGGTCGGCTAGGGAA+TGG | 0.472944 | 1.4:+16985048 | MS.gene98976:CDS |
| AGGGAGTCTCATTGCATTCA+GGG | 0.484816 | 1.4:+16982857 | MS.gene98976:CDS |
| GTACTACTTTGTGTAAAGAT+GGG | 0.493098 | 1.4:+16982992 | MS.gene98976:CDS |
| TTTGCAGTGCTAGTAAAGGT+TGG | 0.495767 | 1.4:+16987210 | MS.gene98976:intron |
| TGATTTGGCACGCCGACTGA+TGG | 0.498590 | 1.4:+16987527 | MS.gene98976:CDS |
| CTATATTTGATGGGTCGGCT+AGG | 0.502389 | 1.4:+16985042 | MS.gene98976:CDS |
| CTTCCTTGACCTGCAAATCC+AGG | 0.503251 | 1.4:-16982904 | None:intergenic |
| AGCTCCACATGTGAATGAAC+CGG | 0.504944 | 1.4:+16985139 | MS.gene98976:CDS |
| CAAAATGCTGGACTTATCAA+AGG | 0.505054 | 1.4:+16986438 | MS.gene98976:CDS |
| TAGAAAATGCCATTGTGTGC+AGG | 0.508226 | 1.4:+16986469 | MS.gene98976:CDS |
| TGCAGCATTTCCTTCAGAAG+TGG | 0.509016 | 1.4:+16985190 | MS.gene98976:CDS |
| GGCACACATAGTAGCTTACA+AGG | 0.509534 | 1.4:+16987340 | MS.gene98976:CDS |
| GGAATAAAACAAATCATCAA+AGG | 0.512563 | 1.4:-16985954 | None:intergenic |
| AAAATGCTGGACTTATCAAA+GGG | 0.513412 | 1.4:+16986439 | MS.gene98976:CDS |
| TAAGCTACTATGTGTGCCAC+TGG | 0.514194 | 1.4:-16987335 | None:intergenic |
| TATATTTGATGGGTCGGCTA+GGG | 0.519772 | 1.4:+16985043 | MS.gene98976:CDS |
| CGCAGATTCCTATATTTGAT+GGG | 0.523997 | 1.4:+16985033 | MS.gene98976:intron |
| GTTGAGCAAATGCAAAATGC+TGG | 0.524487 | 1.4:+16986426 | MS.gene98976:CDS |
| TTCTGCATTGGAAGGTTCTG+GGG | 0.524504 | 1.4:+16983044 | MS.gene98976:CDS |
| GTGGCAGCCTTGGAAGAAGT+TGG | 0.528078 | 1.4:+16985071 | MS.gene98976:CDS |
| AAGCTTCAACAAACTCTAAG+AGG | 0.529912 | 1.4:+16982820 | MS.gene98976:CDS |
| GCATTTCCTTCAGAAGTGGT+TGG | 0.531128 | 1.4:+16985194 | MS.gene98976:CDS |
| ACAAACTCTAAGAGGAATTG+TGG | 0.537569 | 1.4:+16982828 | MS.gene98976:CDS |
| AACCTTCTGCATTTATGAGG+AGG | 0.537629 | 1.4:+16985997 | MS.gene98976:CDS |
| AAGAGGAATTGTGGAGCGGA+AGG | 0.538994 | 1.4:+16982837 | MS.gene98976:CDS |
| GATTCCTATATTTGATGGGT+CGG | 0.549220 | 1.4:+16985037 | MS.gene98976:intron |
| TCTAAAATCTTGTGACGGCA+TGG | 0.551674 | 1.4:-16987263 | None:intergenic |
| TCGACGGTGAGATTGTGTCC+TGG | 0.553323 | 1.4:+16982886 | MS.gene98976:CDS |
| CTCTAAACCAACTTCTTCCA+AGG | 0.554837 | 1.4:-16985078 | None:intergenic |
| TGAGCAAATTCAACAGAAGC+AGG | 0.556051 | 1.4:-16982955 | None:intergenic |
| CACCAGCAATTGGCTGCCAG+TGG | 0.565548 | 1.4:+16985918 | MS.gene98976:CDS |
| TGTCCTGGATTTGCAGGTCA+AGG | 0.566608 | 1.4:+16982901 | MS.gene98976:CDS |
| TCATTCCTCCAAACATGTAC+CGG | 0.567307 | 1.4:-16985158 | None:intergenic |
| AGTCTCATTGCATTCAGGGA+AGG | 0.569902 | 1.4:+16982861 | MS.gene98976:CDS |
| GATCATCAAAACTCGTCACA+TGG | 0.570839 | 1.4:+16982696 | MS.gene98976:CDS |
| CTTTGTGTAAAGATGGGGTG+AGG | 0.573979 | 1.4:+16982998 | MS.gene98976:CDS |
| CTGGATTTGCAGGTCAAGGA+AGG | 0.576111 | 1.4:+16982905 | MS.gene98976:CDS |
| AATAAAACAAATCATCAAAG+GGG | 0.576399 | 1.4:-16985952 | None:intergenic |
| GTTACTCCAACCACTTCTGA+AGG | 0.580389 | 1.4:-16985200 | None:intergenic |
| TTATGGCATAAACTTTCCAC+AGG | 0.581378 | 1.4:+16985223 | MS.gene98976:CDS |
| GATTTGCAGGTCAAGGAAGG+TGG | 0.585501 | 1.4:+16982908 | MS.gene98976:CDS |
| AACCTCCTCATAAATGCAGA+AGG | 0.588269 | 1.4:-16985999 | None:intergenic |
| TCTGGACAAAGCTATTTGCA+TGG | 0.591663 | 1.4:-16985975 | None:intergenic |
| ATGAACCGGTACATGTTTGG+AGG | 0.594386 | 1.4:+16985153 | MS.gene98976:CDS |
| GCATTCAGGGAAGGTTTCGA+CGG | 0.598900 | 1.4:+16982870 | MS.gene98976:CDS |
| TTCACGTCATCCCCATCAGT+CGG | 0.599731 | 1.4:-16987539 | None:intergenic |
| CCAAATCAAGATGTAATGCA+TGG | 0.608554 | 1.4:-16987512 | None:intergenic |
| ATTTGGCACGCCGACTGATG+GGG | 0.611355 | 1.4:+16987529 | MS.gene98976:CDS |
| TACTACTTTGTGTAAAGATG+GGG | 0.616242 | 1.4:+16982993 | MS.gene98976:CDS |
| TAAGATCTAAAATCTTGTGA+CGG | 0.629623 | 1.4:-16987268 | None:intergenic |
| AGAGGAATTGTGGAGCGGAA+GGG | 0.632291 | 1.4:+16982838 | MS.gene98976:CDS |
| TGGGGTGAGGATTAGGACTG+TGG | 0.642809 | 1.4:+16983011 | MS.gene98976:CDS |
| TCATCACTGAAACGAAGAGG+TGG | 0.642947 | 1.4:-16987239 | None:intergenic |
| CTCTAAGAGGAATTGTGGAG+CGG | 0.643430 | 1.4:+16982833 | MS.gene98976:CDS |
| AAGCTACTATGTGTGCCACT+GGG | 0.645381 | 1.4:-16987334 | None:intergenic |
| TGGGTCGGCTAGGGAATGGG+TGG | 0.651920 | 1.4:+16985052 | MS.gene98976:CDS |
| ATAAAACAAATCATCAAAGG+GGG | 0.664116 | 1.4:-16985951 | None:intergenic |
| AAGCAAATACCTGCACACAA+TGG | 0.670930 | 1.4:-16986478 | None:intergenic |
| GGTTCATCACTGAAACGAAG+AGG | 0.683820 | 1.4:-16987242 | None:intergenic |
| AATGCTGGACTTATCAAAGG+GGG | 0.702132 | 1.4:+16986441 | MS.gene98976:CDS |
| TGATCAAGGTGATGATGCCG+AGG | 0.707861 | 1.4:+16983101 | MS.gene98976:CDS |
| TGTACCGGTTCATTCACATG+TGG | 0.732995 | 1.4:-16985143 | None:intergenic |
| AAATGCTGGACTTATCAAAG+GGG | 0.734053 | 1.4:+16986440 | MS.gene98976:CDS |
| TGGTAATCAAGGACTCCCAG+TGG | 0.735252 | 1.4:+16987319 | MS.gene98976:CDS |
| TTACACAAAGTAGTACAAAG+CGG | 0.761682 | 1.4:-16982985 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAAATACATAGTAAA+AGG | - | chr1.4:16987386-16987405 | None:intergenic | 10.0% |
| !! | TAAATAAATAAATACAAACT+TGG | + | chr1.4:16983996-16984015 | MS.gene98976:intron | 10.0% |
| !!! | AATAAATCGAATTTTAATTA+AGG | + | chr1.4:16983887-16983906 | MS.gene98976:intron | 10.0% |
| !!! | AATAAATCGAATTTTAATTA+AGG | - | chr1.4:16983906-16983887 | None:intergenic | 10.0% |
| !!! | AATTAAAATTCGATTTATTT+TGG | + | chr1.4:16983611-16983630 | MS.gene98976:intron | 10.0% |
| !!! | AATTAAAATTCGATTTATTT+TGG | - | chr1.4:16983630-16983611 | None:intergenic | 10.0% |
| !!! | ATAAATCGAATTTTAATTAA+GGG | + | chr1.4:16983888-16983907 | MS.gene98976:intron | 10.0% |
| !!! | ATAAATCGAATTTTAATTAA+GGG | - | chr1.4:16983907-16983888 | None:intergenic | 10.0% |
| !! | AAGGAAAATAAAAAAGAAAT+CGG | + | chr1.4:16985659-16985678 | MS.gene98976:intron | 15.0% |
| !! | AATAAGTTAAAAACAACTAA+CGG | + | chr1.4:16984698-16984717 | MS.gene98976:intron | 15.0% |
| !! | AGAATGTAATGTATTAATAT+GGG | + | chr1.4:16983208-16983227 | MS.gene98976:intron | 15.0% |
| !! | TAGAATGTAATGTATTAATA+TGG | + | chr1.4:16983207-16983226 | MS.gene98976:intron | 15.0% |
| !! | TATTTCAAAAACTATATGTA+AGG | - | chr1.4:16984986-16985005 | None:intergenic | 15.0% |
| !!! | AAATGTTAGTATTAGTTTTT+AGG | - | chr1.4:16983963-16983982 | None:intergenic | 15.0% |
| !!! | AGTTTATTTAGAACTTATTT+GGG | - | chr1.4:16984783-16984802 | None:intergenic | 15.0% |
| !!! | ATTTCTTTTTTATTTTCCTT+TGG | - | chr1.4:16985659-16985678 | None:intergenic | 15.0% |
| !! | AACTTATTTCAACAACTTAT+TGG | - | chr1.4:16984686-16984705 | None:intergenic | 20.0% |
| !! | AATAAAACAAATCATCAAAG+GGG | - | chr1.4:16985955-16985974 | None:intergenic | 20.0% |
| !! | AATTATAATAAATGTCCAGT+AGG | - | chr1.4:16985354-16985373 | None:intergenic | 20.0% |
| !! | ACAGCAAGAAAATTTAATTA+CGG | - | chr1.4:16984962-16984981 | None:intergenic | 20.0% |
| !! | AGTACATGGAAATATTTAAA+TGG | - | chr1.4:16985307-16985326 | None:intergenic | 20.0% |
| !! | ATAATCTTAGAAATTGTTGA+CGG | - | chr1.4:16984306-16984325 | None:intergenic | 20.0% |
| !! | ATACTATAACAAACCATATT+TGG | - | chr1.4:16985688-16985707 | None:intergenic | 20.0% |
| !! | ATTATAATAAATGTCCAGTA+GGG | - | chr1.4:16985353-16985372 | None:intergenic | 20.0% |
| !! | CTTAAAAATAGTTTACTCAA+AGG | - | chr1.4:16984652-16984671 | None:intergenic | 20.0% |
| !! | GAATAAAACAAATCATCAAA+GGG | - | chr1.4:16985956-16985975 | None:intergenic | 20.0% |
| !! | TCAACCTACAAATTAAAAAA+GGG | - | chr1.4:16986411-16986430 | None:intergenic | 20.0% |
| !! | TGGGTTTATTAATTATATCA+TGG | - | chr1.4:16984764-16984783 | None:intergenic | 20.0% |
| !! | TTAAAATACATAGTAAAAGG+AGG | - | chr1.4:16987383-16987402 | None:intergenic | 20.0% |
| !! | TTGAATTAAAACTAACAGAA+AGG | - | chr1.4:16983669-16983688 | None:intergenic | 20.0% |
| !! | TTGAATTAAAACTAACTGAA+AGG | + | chr1.4:16983828-16983847 | MS.gene98976:intron | 20.0% |
| !!! | AATCAAGATTTTTCTATTAC+TGG | + | chr1.4:16986893-16986912 | MS.gene98976:intron | 20.0% |
| !!! | AGTTTTAATTCAAAAACGTT+AGG | + | chr1.4:16983676-16983695 | MS.gene98976:intron | 20.0% |
| !!! | AGTTTTAATTCAAAAACGTT+AGG | - | chr1.4:16983695-16983676 | None:intergenic | 20.0% |
| !!! | ATGTTTTACCTAATTTTCTA+AGG | + | chr1.4:16985415-16985434 | MS.gene98976:intron | 20.0% |
| !!! | GAGTTTATTTAGAACTTATT+TGG | - | chr1.4:16984784-16984803 | None:intergenic | 20.0% |
| !!! | TTTAGGCTAAATTACATTTT+TGG | - | chr1.4:16983946-16983965 | None:intergenic | 20.0% |
| ! | AGATGACAATCAATCATATA+AGG | - | chr1.4:16986304-16986323 | None:intergenic | 25.0% |
| ! | ATAAAACAAATCATCAAAGG+GGG | - | chr1.4:16985954-16985973 | None:intergenic | 25.0% |
| ! | ATTACTGTCAGTTATCTATT+TGG | - | chr1.4:16986193-16986212 | None:intergenic | 25.0% |
| ! | ATTGAAAATTTGGATGATCA+AGG | + | chr1.4:16983087-16983106 | MS.gene98976:CDS | 25.0% |
| ! | CTCAACCTACAAATTAAAAA+AGG | - | chr1.4:16986412-16986431 | None:intergenic | 25.0% |
| ! | CTGAATAAGTGTTTATAAGT+GGG | + | chr1.4:16984059-16984078 | MS.gene98976:intron | 25.0% |
| ! | GAAATTAGGTACATAAATCT+AGG | + | chr1.4:16986678-16986697 | MS.gene98976:intron | 25.0% |
| ! | GAGTTTATAATATGTGACAT+AGG | - | chr1.4:16984400-16984419 | None:intergenic | 25.0% |
| ! | GATACTACCTAAATAGTTAA+GGG | + | chr1.4:16983919-16983938 | MS.gene98976:intron | 25.0% |
| ! | GATACTACCTAAATAGTTAA+GGG | - | chr1.4:16983938-16983919 | None:intergenic | 25.0% |
| ! | GATGACAATCAATCATATAA+GGG | - | chr1.4:16986303-16986322 | None:intergenic | 25.0% |
| ! | GATTATACATAAACACTTGT+AGG | + | chr1.4:16984320-16984339 | MS.gene98976:intron | 25.0% |
| ! | GGAATAAAACAAATCATCAA+AGG | - | chr1.4:16985957-16985976 | None:intergenic | 25.0% |
| ! | GTATATGTGAAAACTGTAAA+AGG | - | chr1.4:16984422-16984441 | None:intergenic | 25.0% |
| ! | TAATCTTAGAAATTGTTGAC+GGG | - | chr1.4:16984305-16984324 | None:intergenic | 25.0% |
| ! | TAGGATTCAGATTGAAAATT+TGG | + | chr1.4:16983077-16983096 | MS.gene98976:CDS | 25.0% |
| ! | TCAAATAAGTCGATATAAAC+AGG | - | chr1.4:16983234-16983253 | None:intergenic | 25.0% |
| ! | TCTTTCAACCTTAGAAAATT+AGG | - | chr1.4:16985426-16985445 | None:intergenic | 25.0% |
| ! | TGAATAAGTGTTTATAAGTG+GGG | + | chr1.4:16984060-16984079 | MS.gene98976:intron | 25.0% |
| ! | TTTGGTCCAAATATTATAAG+AGG | + | chr1.4:16984624-16984643 | MS.gene98976:intron | 25.0% |
| !! | AAATCAAGATGTGCATATTT+TGG | - | chr1.4:16984595-16984614 | None:intergenic | 25.0% |
| !! | AAATTTGAAATGAAGCAAAC+AGG | - | chr1.4:16982749-16982768 | None:intergenic | 25.0% |
| !! | AACTTCATGCATGAAATTTT+GGG | - | chr1.4:16986626-16986645 | None:intergenic | 25.0% |
| !! | AATTTGAAATGAAGCAAACA+GGG | - | chr1.4:16982748-16982767 | None:intergenic | 25.0% |
| !! | ACTTGTTACTAATTCTTGAT+GGG | + | chr1.4:16985478-16985497 | MS.gene98976:intron | 25.0% |
| !! | ATATTTTACACGTCTTTCAA+AGG | + | chr1.4:16985448-16985467 | MS.gene98976:intron | 25.0% |
| !! | CACAAGATTTTAGATCTTAT+TGG | + | chr1.4:16987272-16987291 | MS.gene98976:CDS | 25.0% |
| !! | CTTTATACATAGAGAGTATA+AGG | + | chr1.4:16983455-16983474 | MS.gene98976:intron | 25.0% |
| !! | TAACTTCATGCATGAAATTT+TGG | - | chr1.4:16986627-16986646 | None:intergenic | 25.0% |
| !! | TAAGATCTAAAATCTTGTGA+CGG | - | chr1.4:16987271-16987290 | None:intergenic | 25.0% |
| !! | TACTTGTTACTAATTCTTGA+TGG | + | chr1.4:16985477-16985496 | MS.gene98976:intron | 25.0% |
| !! | TCAAAATCTTTTGTATAGCA+AGG | + | chr1.4:16985821-16985840 | MS.gene98976:intron | 25.0% |
| !! | TTGTTTTCATATAGAGCTTA+TGG | - | chr1.4:16983420-16983439 | None:intergenic | 25.0% |
| !!! | AGGTTTTTTTCATTTTCTTC+TGG | + | chr1.4:16983696-16983715 | MS.gene98976:intron | 25.0% |
| !!! | ATTTTCTTCTGGAATTTTTC+TGG | + | chr1.4:16983707-16983726 | MS.gene98976:intron | 25.0% |
| !!! | CTGTTTTCAAGCTTATTTAA+TGG | + | chr1.4:16983328-16983347 | MS.gene98976:intron | 25.0% |
| !!! | GATACCCTTTTTTAATTTGT+AGG | + | chr1.4:16986404-16986423 | MS.gene98976:intron | 25.0% |
| !!! | GCATATTTTGGATATTTTGT+TGG | - | chr1.4:16984583-16984602 | None:intergenic | 25.0% |
| !!! | TAATGTCTACTTTTCTAAGT+AGG | - | chr1.4:16984447-16984466 | None:intergenic | 25.0% |
| !!! | TGATCTTTTAGTTGAGATTA+AGG | - | chr1.4:16986867-16986886 | None:intergenic | 25.0% |
| !!! | TTTTCTTCTGGAATTTTTCT+GGG | + | chr1.4:16983708-16983727 | MS.gene98976:intron | 25.0% |
| AAAACAGATAGTCGAAAGAA+AGG | - | chr1.4:16987037-16987056 | None:intergenic | 30.0% | |
| AAAATGCTGGACTTATCAAA+GGG | + | chr1.4:16986439-16986458 | MS.gene98976:CDS | 30.0% | |
| AAGAAATCGGAAACCAAATA+TGG | + | chr1.4:16985672-16985691 | MS.gene98976:intron | 30.0% | |
| AGACTGTTATAGATTGCTTA+CGG | + | chr1.4:16983281-16983300 | MS.gene98976:intron | 30.0% | |
| AGTGACTTAATTTATGCATC+TGG | - | chr1.4:16986706-16986725 | None:intergenic | 30.0% | |
| ATAGAGCTTATGGAAATAAG+TGG | - | chr1.4:16983410-16983429 | None:intergenic | 30.0% | |
| ATGATATGAAGAGGAAAAAG+AGG | + | chr1.4:16983757-16983776 | MS.gene98976:intron | 30.0% | |
| CATTTAACAACTTCTTACCT+CGG | - | chr1.4:16983121-16983140 | None:intergenic | 30.0% | |
| CCACTTATAAACACTTATTC+AGG | - | chr1.4:16984061-16984080 | None:intergenic | 30.0% | |
| CCTGAATAAGTGTTTATAAG+TGG | + | chr1.4:16984058-16984077 | MS.gene98976:intron | 30.0% | |
| CCTGAATAAGTGTTTATAGT+GGG | + | chr1.4:16984234-16984253 | MS.gene98976:intron | 30.0% | |
| CCTTCATAATATACGAGAAA+AGG | + | chr1.4:16984813-16984832 | MS.gene98976:intron | 30.0% | |
| CGATACTACCTAAATAGTTA+AGG | + | chr1.4:16983918-16983937 | MS.gene98976:intron | 30.0% | |
| CGATACTACCTAAATAGTTA+AGG | - | chr1.4:16983937-16983918 | None:intergenic | 30.0% | |
| CTGAATAAGTGTTTATAGTG+GGG | + | chr1.4:16984235-16984254 | MS.gene98976:intron | 30.0% | |
| GAAAGGACAAAAATGTGTAA+TGG | + | chr1.4:16983845-16983864 | MS.gene98976:intron | 30.0% | |
| GAATAAGTGTTTATAAGTGG+GGG | + | chr1.4:16984061-16984080 | MS.gene98976:intron | 30.0% | |
| GGCAATAAATAGACTACAAA+TGG | - | chr1.4:16986040-16986059 | None:intergenic | 30.0% | |
| GTACTACTTTGTGTAAAGAT+GGG | + | chr1.4:16982992-16983011 | MS.gene98976:CDS | 30.0% | |
| GTATCATAAGCTATCAAAAC+CGG | - | chr1.4:16986561-16986580 | None:intergenic | 30.0% | |
| TAATCCCATCTAATGAGAAA+AGG | - | chr1.4:16985577-16985596 | None:intergenic | 30.0% | |
| TACATAAACACTTGTAGGAT+AGG | + | chr1.4:16984325-16984344 | MS.gene98976:intron | 30.0% | |
| TACTACTTTGTGTAAAGATG+GGG | + | chr1.4:16982993-16983012 | MS.gene98976:CDS | 30.0% | |
| TGAATAAGTGTTTATAGTGG+GGG | + | chr1.4:16984236-16984255 | MS.gene98976:intron | 30.0% | |
| TGACTCTTATGTTATATGCA+GGG | + | chr1.4:16987486-16987505 | MS.gene98976:intron | 30.0% | |
| TGATTGATACAATTGCAGTT+AGG | - | chr1.4:16986277-16986296 | None:intergenic | 30.0% | |
| TGTACTACTTTGTGTAAAGA+TGG | + | chr1.4:16982991-16983010 | MS.gene98976:CDS | 30.0% | |
| TTAATCTCTGATGTAAGACA+TGG | + | chr1.4:16986800-16986819 | MS.gene98976:intron | 30.0% | |
| TTACACAAAGTAGTACAAAG+CGG | - | chr1.4:16982988-16983007 | None:intergenic | 30.0% | |
| TTGACTCTTATGTTATATGC+AGG | + | chr1.4:16987485-16987504 | MS.gene98976:intron | 30.0% | |
| TTGGATAAGCAACTTAAGTT+TGG | - | chr1.4:16984371-16984390 | None:intergenic | 30.0% | |
| TTTACCACAAACCTCTAATA+AGG | + | chr1.4:16984845-16984864 | MS.gene98976:intron | 30.0% | |
| ! | AAGGTGCCTCTTATAATATT+TGG | - | chr1.4:16984633-16984652 | None:intergenic | 30.0% |
| ! | ACTAGGCTAAATTGCATTTT+TGG | + | chr1.4:16983551-16983570 | MS.gene98976:intron | 30.0% |
| ! | AGATAGCATTTTCAATTTCG+TGG | + | chr1.4:16984924-16984943 | MS.gene98976:intron | 30.0% |
| ! | ATAAGATGTGAAGCATTTGA+TGG | + | chr1.4:16985853-16985872 | MS.gene98976:intron | 30.0% |
| ! | CAAATACACCTTTCTTTTAC+AGG | + | chr1.4:16985895-16985914 | MS.gene98976:intron | 30.0% |
| ! | CCTTTTCTCGTATATTATGA+AGG | - | chr1.4:16984816-16984835 | None:intergenic | 30.0% |
| ! | GTCACTATTTTCTCAAAGTA+TGG | + | chr1.4:16986720-16986739 | MS.gene98976:intron | 30.0% |
| ! | GTTTGAGTTTAGGAACAATT+TGG | + | chr1.4:16982930-16982949 | MS.gene98976:CDS | 30.0% |
| ! | GTTTTGCACTAAATAACACA+TGG | - | chr1.4:16986075-16986094 | None:intergenic | 30.0% |
| ! | TAGTTTTTATGTTCAGAGTG+GGG | - | chr1.4:16983535-16983554 | None:intergenic | 30.0% |
| ! | TGAAGAAAACAGAAAGTACA+TGG | - | chr1.4:16985321-16985340 | None:intergenic | 30.0% |
| ! | TTTAATGTCCATTTTGCGTA+TGG | + | chr1.4:16984469-16984488 | MS.gene98976:intron | 30.0% |
| ! | TTTTGGTCCCTTAACTATTT+AGG | + | chr1.4:16983568-16983587 | MS.gene98976:intron | 30.0% |
| ! | TTTTGGTCCCTTAACTATTT+AGG | - | chr1.4:16983587-16983568 | None:intergenic | 30.0% |
| !! | CTAGTTTTTATGTTCAGAGT+GGG | - | chr1.4:16983536-16983555 | None:intergenic | 30.0% |
| !! | TCGTATATTATGAAGGCATT+TGG | - | chr1.4:16984809-16984828 | None:intergenic | 30.0% |
| !!! | AATGGCGTTTTTGATTTATG+TGG | - | chr1.4:16985601-16985620 | None:intergenic | 30.0% |
| AAATGCTGGACTTATCAAAG+GGG | + | chr1.4:16986440-16986459 | MS.gene98976:CDS | 35.0% | |
| AAGCTTCAACAAACTCTAAG+AGG | + | chr1.4:16982820-16982839 | MS.gene98976:CDS | 35.0% | |
| AATGAGGGTCTGTATTTGAA+TGG | - | chr1.4:16987099-16987118 | None:intergenic | 35.0% | |
| ACTCTTATGTTATATGCAGG+GGG | + | chr1.4:16987488-16987507 | MS.gene98976:intron | 35.0% | |
| AGATTTCAGTGTGCTAATGA+GGG | - | chr1.4:16987114-16987133 | None:intergenic | 35.0% | |
| AGCTGTACTATCCTTATTAG+AGG | - | chr1.4:16984859-16984878 | None:intergenic | 35.0% | |
| AGGTACTTCAAAAATTGCCT+GGG | + | chr1.4:16987009-16987028 | MS.gene98976:intron | 35.0% | |
| AGTATGGCACTATTTGTTTG+TGG | + | chr1.4:16986736-16986755 | MS.gene98976:intron | 35.0% | |
| CAAAATGCTGGACTTATCAA+AGG | + | chr1.4:16986438-16986457 | MS.gene98976:CDS | 35.0% | |
| CCAAATCAAGATGTAATGCA+TGG | - | chr1.4:16987515-16987534 | None:intergenic | 35.0% | |
| CCACTCTGAACATAAAAACT+AGG | + | chr1.4:16983534-16983553 | MS.gene98976:intron | 35.0% | |
| CCATGCATTACATCTTGATT+TGG | + | chr1.4:16987512-16987531 | MS.gene98976:CDS | 35.0% | |
| CCCACTATAAACACTTATTC+AGG | - | chr1.4:16984237-16984256 | None:intergenic | 35.0% | |
| CCTAAACTAGTAGATTCAAC+AGG | - | chr1.4:16986348-16986367 | None:intergenic | 35.0% | |
| CGCAGATTCCTATATTTGAT+GGG | + | chr1.4:16985033-16985052 | MS.gene98976:intron | 35.0% | |
| CTATCCTTATTAGAGGTTTG+TGG | - | chr1.4:16984852-16984871 | None:intergenic | 35.0% | |
| CTATTTAGGTAGTATCGCTT+TGG | + | chr1.4:16983582-16983601 | MS.gene98976:intron | 35.0% | |
| CTATTTAGGTAGTATCGCTT+TGG | - | chr1.4:16983601-16983582 | None:intergenic | 35.0% | |
| GAAAGGACCAAAATGTGTAA+TGG | - | chr1.4:16983652-16983671 | None:intergenic | 35.0% | |
| GACTCTTATGTTATATGCAG+GGG | + | chr1.4:16987487-16987506 | MS.gene98976:intron | 35.0% | |
| GCCTGAATAAGTGTTTATAG+TGG | + | chr1.4:16984233-16984252 | MS.gene98976:intron | 35.0% | |
| GTATAAGAGAGAGTGAGTTA+CGG | - | chr1.4:16982726-16982745 | None:intergenic | 35.0% | |
| GTTGGAATTTGGAAGCAATT+AGG | + | chr1.4:16986989-16987008 | MS.gene98976:intron | 35.0% | |
| TAACACAACCTCTCAAAACT+GGG | - | chr1.4:16984096-16984115 | None:intergenic | 35.0% | |
| TAGGTACTTCAAAAATTGCC+TGG | + | chr1.4:16987008-16987027 | MS.gene98976:intron | 35.0% | |
| TATAAGAGAGAGTGAGTTAC+GGG | - | chr1.4:16982725-16982744 | None:intergenic | 35.0% | |
| TATGTGACATAGGTCATGTT+TGG | - | chr1.4:16984390-16984409 | None:intergenic | 35.0% | |
| TCAAAAATCATACTCGTCTC+AGG | - | chr1.4:16987460-16987479 | None:intergenic | 35.0% | |
| TCGCTAAGTGAAATAAAGCA+AGG | - | chr1.4:16986164-16986183 | None:intergenic | 35.0% | |
| TGATACCACCTTAGAAATTG+TGG | - | chr1.4:16984126-16984145 | None:intergenic | 35.0% | |
| TTATGGCATAAACTTTCCAC+AGG | + | chr1.4:16985223-16985242 | MS.gene98976:CDS | 35.0% | |
| TTCTCACTTAAAGCTACCAA+AGG | + | chr1.4:16985640-16985659 | MS.gene98976:intron | 35.0% | |
| TTCTGTATGTGAGAGATGAT+TGG | + | chr1.4:16986921-16986940 | MS.gene98976:intron | 35.0% | |
| TTGATGGAGATGATATGAAG+AGG | + | chr1.4:16983748-16983767 | MS.gene98976:intron | 35.0% | |
| ! | ACAAACTCTAAGAGGAATTG+TGG | + | chr1.4:16982828-16982847 | MS.gene98976:CDS | 35.0% |
| ! | AGCAACCTTTTCTCATTAGA+TGG | + | chr1.4:16985569-16985588 | MS.gene98976:intron | 35.0% |
| ! | ATGACTTGATGATTCAAGTG+GGG | + | chr1.4:16983478-16983497 | MS.gene98976:intron | 35.0% |
| ! | CCTGTTGAATCTACTAGTTT+AGG | + | chr1.4:16986345-16986364 | MS.gene98976:intron | 35.0% |
| ! | CGGTTTTTGCAATAGTACAA+TGG | - | chr1.4:16985619-16985638 | None:intergenic | 35.0% |
| ! | CTTCTCTCCATTACACATTT+TGG | + | chr1.4:16983642-16983661 | MS.gene98976:intron | 35.0% |
| ! | GAATAAGTGTTTATAGTGGG+GGG | + | chr1.4:16984237-16984256 | MS.gene98976:intron | 35.0% |
| ! | GATGACTTGATGATTCAAGT+GGG | + | chr1.4:16983477-16983496 | MS.gene98976:intron | 35.0% |
| ! | GATTCCTATATTTGATGGGT+CGG | + | chr1.4:16985037-16985056 | MS.gene98976:intron | 35.0% |
| ! | GCAACCTTTTCTCATTAGAT+GGG | + | chr1.4:16985570-16985589 | MS.gene98976:intron | 35.0% |
| ! | GTGTAATGGAGAGAAGTTAA+GGG | + | chr1.4:16983859-16983878 | MS.gene98976:intron | 35.0% |
| ! | TCTTGATTTCTGCAAGGTTT+TGG | + | chr1.4:16984606-16984625 | MS.gene98976:intron | 35.0% |
| ! | TGTGTAATGGAGAGAAGTTA+AGG | + | chr1.4:16983858-16983877 | MS.gene98976:intron | 35.0% |
| ! | TGTGTAATGGAGAGAAGTTA+AGG | - | chr1.4:16983877-16983858 | None:intergenic | 35.0% |
| ! | TTCTTTTGCAGTGCTAGTAA+AGG | + | chr1.4:16987206-16987225 | MS.gene98976:intron | 35.0% |
| ! | TTTGCTCAGTTTGGTAATCA+AGG | + | chr1.4:16987308-16987327 | MS.gene98976:CDS | 35.0% |
| !! | AAAGCAAGGTTTTGTACATC+TGG | - | chr1.4:16986150-16986169 | None:intergenic | 35.0% |
| !! | ATGATTGGTAGTGTAAGAGT+AGG | + | chr1.4:16986936-16986955 | MS.gene98976:intron | 35.0% |
| !! | ATTTTGATGAAACAGAGCCT+AGG | - | chr1.4:16984902-16984921 | None:intergenic | 35.0% |
| !! | CCTAGTTTTTATGTTCAGAG+TGG | - | chr1.4:16983537-16983556 | None:intergenic | 35.0% |
| !! | TGGTAGCTTTAAGTGAGAAT+CGG | - | chr1.4:16985639-16985658 | None:intergenic | 35.0% |
| !! | TTCTTGTTGTTGAAGGTTGA+TGG | + | chr1.4:16983732-16983751 | MS.gene98976:intron | 35.0% |
| !! | TTGCTTTATTTCACTTAGCG+AGG | + | chr1.4:16986163-16986182 | MS.gene98976:intron | 35.0% |
| AACCTCCTCATAAATGCAGA+AGG | - | chr1.4:16986002-16986021 | None:intergenic | 40.0% | |
| AACCTTCTGCATTTATGAGG+AGG | + | chr1.4:16985997-16986016 | MS.gene98976:CDS | 40.0% | |
| AACTTTCCACAGGTAAGGAT+AGG | + | chr1.4:16985233-16985252 | MS.gene98976:intron | 40.0% | |
| AAGCAAATACCTGCACACAA+TGG | - | chr1.4:16986481-16986500 | None:intergenic | 40.0% | |
| AATGCTGGACTTATCAAAGG+GGG | + | chr1.4:16986441-16986460 | MS.gene98976:CDS | 40.0% | |
| ACCACCTTAGAAATTGTGGA+CGG | - | chr1.4:16984122-16984141 | None:intergenic | 40.0% | |
| ACTTTCATATCCACTCTCCT+AGG | + | chr1.4:16984882-16984901 | MS.gene98976:intron | 40.0% | |
| AGAGTTAGGCTAGAGTTAGT+TGG | + | chr1.4:16986971-16986990 | MS.gene98976:intron | 40.0% | |
| AGTAAAAGGAGGAGAACCAA+AGG | - | chr1.4:16987372-16987391 | None:intergenic | 40.0% | |
| AGTCAAAGAGTGGAGTGATA+CGG | + | chr1.4:16983502-16983521 | MS.gene98976:intron | 40.0% | |
| CACAAAGAGATCGTGAGAAT+GGG | - | chr1.4:16982791-16982810 | None:intergenic | 40.0% | |
| CAGAACCTTCTGCATTTATG+AGG | + | chr1.4:16985994-16986013 | MS.gene98976:CDS | 40.0% | |
| CAGATTTCAGTGTGCTAATG+AGG | - | chr1.4:16987115-16987134 | None:intergenic | 40.0% | |
| CATTTGCTTTCTGCATTGGA+AGG | + | chr1.4:16983036-16983055 | MS.gene98976:CDS | 40.0% | |
| CCTTCAGAGCTGTAATCAAT+TGG | + | chr1.4:16986241-16986260 | MS.gene98976:intron | 40.0% | |
| CTAACACAACCTCTCAAAAC+TGG | - | chr1.4:16984097-16984116 | None:intergenic | 40.0% | |
| CTCATAAATGCAGAAGGTTC+TGG | - | chr1.4:16985996-16986015 | None:intergenic | 40.0% | |
| CTCTAAACCAACTTCTTCCA+AGG | - | chr1.4:16985081-16985100 | None:intergenic | 40.0% | |
| CTCTTATGTTATATGCAGGG+GGG | + | chr1.4:16987489-16987508 | MS.gene98976:intron | 40.0% | |
| CTTACACAACCTCACAAAAC+CGG | - | chr1.4:16984281-16984300 | None:intergenic | 40.0% | |
| CTTCAATACACTATCCCTAC+TGG | + | chr1.4:16985336-16985355 | MS.gene98976:intron | 40.0% | |
| GAAGTGGTTGGAGTAACTTA+TGG | + | chr1.4:16985206-16985225 | MS.gene98976:CDS | 40.0% | |
| GAGATAGCAACTGATGTTGA+TGG | + | chr1.4:16985098-16985117 | MS.gene98976:CDS | 40.0% | |
| GAGTTACAAACACATTCACG+TGG | - | chr1.4:16986116-16986135 | None:intergenic | 40.0% | |
| GATCATCAAAACTCGTCACA+TGG | + | chr1.4:16982696-16982715 | MS.gene98976:CDS | 40.0% | |
| GCATAAACTTTCCACAGGTA+AGG | + | chr1.4:16985228-16985247 | MS.gene98976:intron | 40.0% | |
| GCGCAGATTCCTATATTTGA+TGG | + | chr1.4:16985032-16985051 | MS.gene98976:intron | 40.0% | |
| GGCTAGAGTTAGTTGGAATT+TGG | + | chr1.4:16986978-16986997 | MS.gene98976:intron | 40.0% | |
| GTTGAGCAAATGCAAAATGC+TGG | + | chr1.4:16986426-16986445 | MS.gene98976:CDS | 40.0% | |
| TAGAAAATGCCATTGTGTGC+AGG | + | chr1.4:16986469-16986488 | MS.gene98976:CDS | 40.0% | |
| TATCAACCTATCCTTACCTG+TGG | - | chr1.4:16985242-16985261 | None:intergenic | 40.0% | |
| TATGTTAAAGAGTCCCACGT+CGG | + | chr1.4:16984024-16984043 | MS.gene98976:intron | 40.0% | |
| TCATTCCTCCAAACATGTAC+CGG | - | chr1.4:16985161-16985180 | None:intergenic | 40.0% | |
| TCATTGTAGTCACTGTAGAG+AGG | + | chr1.4:16987065-16987084 | MS.gene98976:intron | 40.0% | |
| TCTGGACAAAGCTATTTGCA+TGG | - | chr1.4:16985978-16985997 | None:intergenic | 40.0% | |
| TGAATGAACCGGTACATGTT+TGG | + | chr1.4:16985150-16985169 | MS.gene98976:CDS | 40.0% | |
| TGAGCAAATTCAACAGAAGC+AGG | - | chr1.4:16982958-16982977 | None:intergenic | 40.0% | |
| TGCACATCTTGATTTCTGCA+AGG | + | chr1.4:16984600-16984619 | MS.gene98976:intron | 40.0% | |
| TTTCTGCATTGGAAGGTTCT+GGG | + | chr1.4:16983043-16983062 | MS.gene98976:CDS | 40.0% | |
| TTTGCAGTGCTAGTAAAGGT+TGG | + | chr1.4:16987210-16987229 | MS.gene98976:intron | 40.0% | |
| ! | AAGGAAGGTGGTTTGAGTTT+AGG | + | chr1.4:16982920-16982939 | MS.gene98976:CDS | 40.0% |
| ! | CCAATTGATTACAGCTCTGA+AGG | - | chr1.4:16986244-16986263 | None:intergenic | 40.0% |
| ! | GAGCTGTAATCAATTGGTTC+TGG | + | chr1.4:16986247-16986266 | MS.gene98976:intron | 40.0% |
| ! | GCTTACAAGGTTTTTGCCTT+TGG | + | chr1.4:16987353-16987372 | MS.gene98976:intron | 40.0% |
| ! | GGATGACTTGATGATTCAAG+TGG | + | chr1.4:16983476-16983495 | MS.gene98976:intron | 40.0% |
| ! | GTGAGAATGGGTGTGATTTT+GGG | - | chr1.4:16982779-16982798 | None:intergenic | 40.0% |
| ! | TATATTTGATGGGTCGGCTA+GGG | + | chr1.4:16985043-16985062 | MS.gene98976:CDS | 40.0% |
| ! | TCTAAAATCTTGTGACGGCA+TGG | - | chr1.4:16987266-16987285 | None:intergenic | 40.0% |
| ! | TGACTTGATGATTCAAGTGG+GGG | + | chr1.4:16983479-16983498 | MS.gene98976:intron | 40.0% |
| ! | TGCTTCTGTTGAATTTGCTC+AGG | + | chr1.4:16982957-16982976 | MS.gene98976:CDS | 40.0% |
| !! | AAGAGCATCCATACGCAAAA+TGG | - | chr1.4:16984480-16984499 | None:intergenic | 40.0% |
| !! | AGCTCTGAAGGCTGAAAATT+TGG | - | chr1.4:16986232-16986251 | None:intergenic | 40.0% |
| !! | GCTCTGAAGGCTGAAAATTT+GGG | - | chr1.4:16986231-16986250 | None:intergenic | 40.0% |
| !! | GTTCTGGGGTTGATAATTGT+AGG | + | chr1.4:16983058-16983077 | MS.gene98976:CDS | 40.0% |
| !! | TCTGGGATTCTTGTTGTTGA+AGG | + | chr1.4:16983725-16983744 | MS.gene98976:intron | 40.0% |
| !!! | CAGTTTTGAGAGGTTGTGTT+AGG | + | chr1.4:16984095-16984114 | MS.gene98976:intron | 40.0% |
| !!! | GACAACTCTAGAGTTTTCGT+AGG | + | chr1.4:16986774-16986793 | MS.gene98976:intron | 40.0% |
| AAAGTTCCGATTCTCACGCA+AGG | - | chr1.4:16985751-16985770 | None:intergenic | 45.0% | |
| AACACATGGCAACACTAACG+AGG | - | chr1.4:16986061-16986080 | None:intergenic | 45.0% | |
| AACAGGCAAGAACTAACGAG+AGG | - | chr1.4:16986331-16986350 | None:intergenic | 45.0% | |
| AAGGGAGTCTCATTGCATTC+AGG | + | chr1.4:16982856-16982875 | MS.gene98976:CDS | 45.0% | |
| AAGTTCCGATTCTCACGCAA+GGG | - | chr1.4:16985750-16985769 | None:intergenic | 45.0% | |
| ACAGGCAAGAACTAACGAGA+GGG | - | chr1.4:16986330-16986349 | None:intergenic | 45.0% | |
| ACATAGCTCGGCATTAGGAA+CGG | - | chr1.4:16986526-16986545 | None:intergenic | 45.0% | |
| ACGCAAGGGTAATCATGATG+GGG | - | chr1.4:16985736-16985755 | None:intergenic | 45.0% | |
| AGATTGTGTCCTGGATTTGC+AGG | + | chr1.4:16982895-16982914 | MS.gene98976:CDS | 45.0% | |
| AGCTCCACATGTGAATGAAC+CGG | + | chr1.4:16985139-16985158 | MS.gene98976:CDS | 45.0% | |
| AGGGAGTCTCATTGCATTCA+GGG | + | chr1.4:16982857-16982876 | MS.gene98976:CDS | 45.0% | |
| AGTCTCATTGCATTCAGGGA+AGG | + | chr1.4:16982861-16982880 | MS.gene98976:CDS | 45.0% | |
| ATGAACCGGTACATGTTTGG+AGG | + | chr1.4:16985153-16985172 | MS.gene98976:CDS | 45.0% | |
| CACGCAAGGGTAATCATGAT+GGG | - | chr1.4:16985737-16985756 | None:intergenic | 45.0% | |
| CCACCTTAGAAATTGTGGAC+GGG | - | chr1.4:16984121-16984140 | None:intergenic | 45.0% | |
| CTAGCCGACCCATCAAATAT+AGG | - | chr1.4:16985044-16985063 | None:intergenic | 45.0% | |
| CTATCACATAGCTCGGCATT+AGG | - | chr1.4:16986531-16986550 | None:intergenic | 45.0% | |
| CTTTCTGCATTGGAAGGTTC+TGG | + | chr1.4:16983042-16983061 | MS.gene98976:CDS | 45.0% | |
| CTTTGTGTAAAGATGGGGTG+AGG | + | chr1.4:16982998-16983017 | MS.gene98976:CDS | 45.0% | |
| GATTACCCTTGCGTGAGAAT+CGG | + | chr1.4:16985742-16985761 | MS.gene98976:intron | 45.0% | |
| GCACAAAGAGATCGTGAGAA+TGG | - | chr1.4:16982792-16982811 | None:intergenic | 45.0% | |
| GCATTTCCTTCAGAAGTGGT+TGG | + | chr1.4:16985194-16985213 | MS.gene98976:CDS | 45.0% | |
| GGAATCTGCGCATGAAATCA+AGG | - | chr1.4:16985023-16985042 | None:intergenic | 45.0% | |
| GGAGATGAGAGAGAAGAGTT+AGG | + | chr1.4:16986957-16986976 | MS.gene98976:intron | 45.0% | |
| GGCACACATAGTAGCTTACA+AGG | + | chr1.4:16987340-16987359 | MS.gene98976:CDS | 45.0% | |
| GGTGTTAAAGAGTCCCACAT+CGG | + | chr1.4:16984200-16984219 | MS.gene98976:intron | 45.0% | |
| GGTTCATCACTGAAACGAAG+AGG | - | chr1.4:16987245-16987264 | None:intergenic | 45.0% | |
| GTAAAGATGGGGTGAGGATT+AGG | + | chr1.4:16983004-16983023 | MS.gene98976:CDS | 45.0% | |
| GTTACTCCAACCACTTCTGA+AGG | - | chr1.4:16985203-16985222 | None:intergenic | 45.0% | |
| TAAGCTACTATGTGTGCCAC+TGG | - | chr1.4:16987338-16987357 | None:intergenic | 45.0% | |
| TAGTCGAAAGAAAGGAACCC+AGG | - | chr1.4:16987029-16987048 | None:intergenic | 45.0% | |
| TCAACTCAAGTAGCAGCTTG+TGG | - | chr1.4:16985511-16985530 | None:intergenic | 45.0% | |
| TCACGATCTCTTTGTGCAGA+CGG | + | chr1.4:16982795-16982814 | MS.gene98976:intron | 45.0% | |
| TCACGCAAGGGTAATCATGA+TGG | - | chr1.4:16985738-16985757 | None:intergenic | 45.0% | |
| TCATCACTGAAACGAAGAGG+TGG | - | chr1.4:16987242-16987261 | None:intergenic | 45.0% | |
| TCGCTAGCTATCACATAGCT+CGG | - | chr1.4:16986538-16986557 | None:intergenic | 45.0% | |
| TGCAGCATTTCCTTCAGAAG+TGG | + | chr1.4:16985190-16985209 | MS.gene98976:CDS | 45.0% | |
| TGCTGGTGCCTGTAAAAGAA+AGG | - | chr1.4:16985906-16985925 | None:intergenic | 45.0% | |
| TTAAAGAGTCCCACATCGGT+TGG | + | chr1.4:16984204-16984223 | MS.gene98976:intron | 45.0% | |
| TTCTGCATTGGAAGGTTCTG+GGG | + | chr1.4:16983044-16983063 | MS.gene98976:CDS | 45.0% | |
| ! | AAGCTACTATGTGTGCCACT+GGG | - | chr1.4:16987337-16987356 | None:intergenic | 45.0% |
| ! | ACAAGCTGCTACTTGAGTTG+AGG | + | chr1.4:16985510-16985529 | MS.gene98976:intron | 45.0% |
| ! | CGTGAGAATGGGTGTGATTT+TGG | - | chr1.4:16982780-16982799 | None:intergenic | 45.0% |
| ! | CTATATTTGATGGGTCGGCT+AGG | + | chr1.4:16985042-16985061 | MS.gene98976:CDS | 45.0% |
| ! | CTCTAAGAGGAATTGTGGAG+CGG | + | chr1.4:16982833-16982852 | MS.gene98976:CDS | 45.0% |
| ! | CTTTTACAGGCACCAGCAAT+TGG | + | chr1.4:16985908-16985927 | MS.gene98976:intron | 45.0% |
| ! | GGAGCATTTGCTTTCTGCAT+TGG | + | chr1.4:16983032-16983051 | MS.gene98976:CDS | 45.0% |
| ! | TAAAGAGTCCCACATCGGTT+GGG | + | chr1.4:16984205-16984224 | MS.gene98976:intron | 45.0% |
| !! | AAAAAAGGGTATCCACCCAG+TGG | - | chr1.4:16986397-16986416 | None:intergenic | 45.0% |
| !! | CGGTTTTGTGAGGTTGTGTA+AGG | + | chr1.4:16984279-16984298 | MS.gene98976:intron | 45.0% |
| !! | TGTACCGGTTCATTCACATG+TGG | - | chr1.4:16985146-16985165 | None:intergenic | 45.0% |
| !!! | AATCGTCACCCAGTTTTGAG+AGG | + | chr1.4:16984085-16984104 | MS.gene98976:intron | 45.0% |
| AAGAGGAATTGTGGAGCGGA+AGG | + | chr1.4:16982837-16982856 | MS.gene98976:CDS | 50.0% | |
| ACCACCTGCTATCAGGTTTC+CGG | + | chr1.4:16984169-16984188 | MS.gene98976:intron | 50.0% | |
| ACGATCTCTTTGTGCAGACG+GGG | + | chr1.4:16982797-16982816 | MS.gene98976:intron | 50.0% | |
| AGAGGAATTGTGGAGCGGAA+GGG | + | chr1.4:16982838-16982857 | MS.gene98976:CDS | 50.0% | |
| AGGCCCGTCCACAATTTCTA+AGG | + | chr1.4:16984115-16984134 | MS.gene98976:intron | 50.0% | |
| CAAAGAGTGGAGTGATACGG+AGG | + | chr1.4:16983505-16983524 | MS.gene98976:intron | 50.0% | |
| CACGATCTCTTTGTGCAGAC+GGG | + | chr1.4:16982796-16982815 | MS.gene98976:intron | 50.0% | |
| CTCTCGCTGTTTGCTCAGTT+TGG | + | chr1.4:16987299-16987318 | MS.gene98976:CDS | 50.0% | |
| CTGGATTTGCAGGTCAAGGA+AGG | + | chr1.4:16982905-16982924 | MS.gene98976:CDS | 50.0% | |
| CTTCCTTGACCTGCAAATCC+AGG | - | chr1.4:16982907-16982926 | None:intergenic | 50.0% | |
| GAAATCCTCACCTCACAAGC+CGG | + | chr1.4:16984259-16984278 | MS.gene98976:intron | 50.0% | |
| GATACCATGCAACCACCACT+GGG | + | chr1.4:16986379-16986398 | MS.gene98976:intron | 50.0% | |
| GATTTGCAGGTCAAGGAAGG+TGG | + | chr1.4:16982908-16982927 | MS.gene98976:CDS | 50.0% | |
| GCATTCAGGGAAGGTTTCGA+CGG | + | chr1.4:16982870-16982889 | MS.gene98976:CDS | 50.0% | |
| GCTATGTGATAGCTAGCGAC+CGG | + | chr1.4:16986539-16986558 | MS.gene98976:intron | 50.0% | |
| TGAAACAGAGCCTAGGAGAG+TGG | - | chr1.4:16984895-16984914 | None:intergenic | 50.0% | |
| TGATACCATGCAACCACCAC+TGG | + | chr1.4:16986378-16986397 | MS.gene98976:intron | 50.0% | |
| TGGTAATCAAGGACTCCCAG+TGG | + | chr1.4:16987319-16987338 | MS.gene98976:CDS | 50.0% | |
| TGTCCTGGATTTGCAGGTCA+AGG | + | chr1.4:16982901-16982920 | MS.gene98976:CDS | 50.0% | |
| ! | ATACTCGTCTCAGGTTGCAC+AGG | - | chr1.4:16987451-16987470 | None:intergenic | 50.0% |
| ! | CCCGTCCACAATTTCTAAGG+TGG | + | chr1.4:16984118-16984137 | MS.gene98976:intron | 50.0% |
| ! | TGATCAAGGTGATGATGCCG+AGG | + | chr1.4:16983101-16983120 | MS.gene98976:CDS | 50.0% |
| AACCACTGGCAGCCAATTGC+TGG | - | chr1.4:16985923-16985942 | None:intergenic | 55.0% | |
| AGGGGGTTGTCGAAAACCAC+TGG | - | chr1.4:16985937-16985956 | None:intergenic | 55.0% | |
| CAAGTGGGGGAGTCAAAGAG+TGG | + | chr1.4:16983492-16983511 | MS.gene98976:intron | 55.0% | |
| CCACCTGCTATCAGGTTTCC+GGG | + | chr1.4:16984170-16984189 | MS.gene98976:intron | 55.0% | |
| CCTGATAGCAGGTGGTCCAA+CGG | - | chr1.4:16984165-16984184 | None:intergenic | 55.0% | |
| CTGATAGCAGGTGGTCCAAC+GGG | - | chr1.4:16984164-16984183 | None:intergenic | 55.0% | |
| GTGGCAGCCTTGGAAGAAGT+TGG | + | chr1.4:16985071-16985090 | MS.gene98976:CDS | 55.0% | |
| TATCAGGTTTCCGGGCGTGA+GGG | + | chr1.4:16984178-16984197 | MS.gene98976:intron | 55.0% | |
| TCGACGGTGAGATTGTGTCC+TGG | + | chr1.4:16982886-16982905 | MS.gene98976:CDS | 55.0% | |
| TCTTTAACACCCCTCACGCC+CGG | - | chr1.4:16984191-16984210 | None:intergenic | 55.0% | |
| TGGGGTGAGGATTAGGACTG+TGG | + | chr1.4:16983011-16983030 | MS.gene98976:CDS | 55.0% | |
| ! | ATTTGGCACGCCGACTGATG+GGG | + | chr1.4:16987529-16987548 | MS.gene98976:CDS | 55.0% |
| ! | GATTTGGCACGCCGACTGAT+GGG | + | chr1.4:16987528-16987547 | MS.gene98976:CDS | 55.0% |
| ! | TGATGGGTCGGCTAGGGAAT+GGG | + | chr1.4:16985049-16985068 | MS.gene98976:CDS | 55.0% |
| ! | TGATTTGGCACGCCGACTGA+TGG | + | chr1.4:16987527-16987546 | MS.gene98976:CDS | 55.0% |
| ! | TTGATGGGTCGGCTAGGGAA+TGG | + | chr1.4:16985048-16985067 | MS.gene98976:CDS | 55.0% |
| !! | AAAGGGTATCCACCCAGTGG+TGG | - | chr1.4:16986394-16986413 | None:intergenic | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | - | chr1.4:16984267-16984286 | None:intergenic | 55.0% |
| !! | CCTCACAAAACCGGCTTGTG+AGG | - | chr1.4:16984272-16984291 | None:intergenic | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+AGG | + | chr1.4:16984269-16984288 | MS.gene98976:intron | 55.0% |
| ACCATGCAACCACCACTGGG+TGG | + | chr1.4:16986382-16986401 | MS.gene98976:intron | 60.0% | |
| ACGCCCGGAAACCTGATAGC+AGG | - | chr1.4:16984176-16984195 | None:intergenic | 60.0% | |
| AGGCCATCTCCCAACCGATG+TGG | - | chr1.4:16984217-16984236 | None:intergenic | 60.0% | |
| AGGCCATCTCTCAACCGACG+TGG | - | chr1.4:16984041-16984060 | None:intergenic | 60.0% | |
| ATCAGGTTTCCGGGCGTGAG+GGG | + | chr1.4:16984179-16984198 | MS.gene98976:intron | 60.0% | |
| CACCAGCAATTGGCTGCCAG+TGG | + | chr1.4:16985918-16985937 | MS.gene98976:CDS | 60.0% | |
| CCCGGAAACCTGATAGCAGG+TGG | - | chr1.4:16984173-16984192 | None:intergenic | 60.0% | |
| CCGTTGGACCACCTGCTATC+AGG | + | chr1.4:16984162-16984181 | MS.gene98976:intron | 60.0% | |
| CTATCAGGTTTCCGGGCGTG+AGG | + | chr1.4:16984177-16984196 | MS.gene98976:intron | 60.0% | |
| GGCCATCTCCCAACCGATGT+GGG | - | chr1.4:16984216-16984235 | None:intergenic | 60.0% | |
| GGCCATCTCTCAACCGACGT+GGG | - | chr1.4:16984040-16984059 | None:intergenic | 60.0% | |
| TAGGGAATGGGTGGCAGCCT+TGG | + | chr1.4:16985061-16985080 | MS.gene98976:CDS | 60.0% | |
| TCCACCCAGTGGTGGTTGCA+TGG | - | chr1.4:16986386-16986405 | None:intergenic | 60.0% | |
| ! | GTCCCACATCGGTTGGGAGA+TGG | + | chr1.4:16984211-16984230 | MS.gene98976:intron | 60.0% |
| ! | GTCCCACGTCGGTTGAGAGA+TGG | + | chr1.4:16984035-16984054 | MS.gene98976:intron | 60.0% |
| GAGCCTCCTCCAAGACCCGT+TGG | + | chr1.4:16984146-16984165 | MS.gene98976:intron | 65.0% | |
| GCAGGTGGTCCAACGGGTCT+TGG | - | chr1.4:16984158-16984177 | None:intergenic | 65.0% | |
| GGTCCAACGGGTCTTGGAGG+AGG | - | chr1.4:16984152-16984171 | None:intergenic | 65.0% | |
| GGTGGTCCAACGGGTCTTGG+AGG | - | chr1.4:16984155-16984174 | None:intergenic | 65.0% | |
| TGGGTCGGCTAGGGAATGGG+TGG | + | chr1.4:16985052-16985071 | MS.gene98976:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 16982674 | 16987560 | 16982674 | ID=MS.gene98976 |
| chr1.4 | mRNA | 16982674 | 16987560 | 16982674 | ID=MS.gene98976.t1;Parent=MS.gene98976 |
| chr1.4 | exon | 16982674 | 16982724 | 16982674 | ID=MS.gene98976.t1.exon1;Parent=MS.gene98976.t1 |
| chr1.4 | CDS | 16982674 | 16982724 | 16982674 | ID=cds.MS.gene98976.t1;Parent=MS.gene98976.t1 |
| chr1.4 | exon | 16982814 | 16983122 | 16982814 | ID=MS.gene98976.t1.exon2;Parent=MS.gene98976.t1 |
| chr1.4 | CDS | 16982814 | 16983122 | 16982814 | ID=cds.MS.gene98976.t1;Parent=MS.gene98976.t1 |
| chr1.4 | exon | 16985038 | 16985244 | 16985038 | ID=MS.gene98976.t1.exon3;Parent=MS.gene98976.t1 |
| chr1.4 | CDS | 16985038 | 16985244 | 16985038 | ID=cds.MS.gene98976.t1;Parent=MS.gene98976.t1 |
| chr1.4 | exon | 16985917 | 16986018 | 16985917 | ID=MS.gene98976.t1.exon4;Parent=MS.gene98976.t1 |
| chr1.4 | CDS | 16985917 | 16986018 | 16985917 | ID=cds.MS.gene98976.t1;Parent=MS.gene98976.t1 |
| chr1.4 | exon | 16986426 | 16986490 | 16986426 | ID=MS.gene98976.t1.exon5;Parent=MS.gene98976.t1 |
| chr1.4 | CDS | 16986426 | 16986490 | 16986426 | ID=cds.MS.gene98976.t1;Parent=MS.gene98976.t1 |
| chr1.4 | exon | 16987217 | 16987361 | 16987217 | ID=MS.gene98976.t1.exon6;Parent=MS.gene98976.t1 |
| chr1.4 | CDS | 16987217 | 16987361 | 16987217 | ID=cds.MS.gene98976.t1;Parent=MS.gene98976.t1 |
| chr1.4 | exon | 16987507 | 16987560 | 16987507 | ID=MS.gene98976.t1.exon7;Parent=MS.gene98976.t1 |
| chr1.4 | CDS | 16987507 | 16987560 | 16987507 | ID=cds.MS.gene98976.t1;Parent=MS.gene98976.t1 |
| Gene Sequence |
| Protein sequence |
