Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25182.t1 | XP_013466579.1 | 96.1 | 310 | 12 | 0 | 1 | 310 | 1 | 310 | 8.20E-175 | 622.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25182.t1 | F4IAT8 | 66.4 | 298 | 100 | 0 | 9 | 306 | 26 | 323 | 6.3e-115 | 415.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25182.t1 | A0A072VG88 | 96.1 | 310 | 12 | 0 | 1 | 310 | 1 | 310 | 5.9e-175 | 622.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25182 | MS.gene004332 | PPI |
| MS.gene83064 | MS.gene25182 | PPI |
| MS.gene039144 | MS.gene25182 | PPI |
| MS.gene026526 | MS.gene25182 | PPI |
| MS.gene002653 | MS.gene25182 | PPI |
| MS.gene98976 | MS.gene25182 | PPI |
| MS.gene002655 | MS.gene25182 | PPI |
| MS.gene063405 | MS.gene25182 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25182.t1 | MTR_1g032430 | 96.129 | 310 | 12 | 0 | 1 | 310 | 1 | 310 | 0.0 | 620 |
| MS.gene25182.t1 | MTR_1g032430 | 94.619 | 223 | 12 | 0 | 1 | 223 | 1 | 223 | 1.02e-158 | 442 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25182.t1 | AT1G24793 | 66.443 | 298 | 100 | 0 | 9 | 306 | 26 | 323 | 4.26e-145 | 411 |
| MS.gene25182.t1 | AT1G25054 | 66.443 | 298 | 100 | 0 | 9 | 306 | 26 | 323 | 4.26e-145 | 411 |
| MS.gene25182.t1 | AT1G25145 | 66.443 | 298 | 100 | 0 | 9 | 306 | 26 | 323 | 4.26e-145 | 411 |
| MS.gene25182.t1 | AT1G25210 | 66.443 | 298 | 100 | 0 | 9 | 306 | 26 | 323 | 4.26e-145 | 411 |
| MS.gene25182.t1 | AT1G24793 | 61.842 | 228 | 87 | 0 | 9 | 236 | 26 | 253 | 1.83e-99 | 293 |
| MS.gene25182.t1 | AT1G25210 | 61.842 | 228 | 87 | 0 | 9 | 236 | 26 | 253 | 1.83e-99 | 293 |
Find 90 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTGCGTTGGAAGGTTT+TGG | 0.143232 | 1.3:+17353329 | MS.gene25182:CDS |
| TAGGATTCAGATTGAAAATT+TGG | 0.152736 | 1.3:+17353364 | MS.gene25182:CDS |
| TACAAACCCCTTTGATGATT+TGG | 0.241755 | 1.3:+17355924 | MS.gene25182:CDS |
| CTCATAGATGCAGAAGGTTC+TGG | 0.292319 | 1.3:-17355971 | None:intergenic |
| AAGGAAGGTGGTTTGAGTTT+AGG | 0.298029 | 1.3:+17353207 | MS.gene25182:CDS |
| CCATGCATTACATCTTGATT+TGG | 0.320373 | 1.3:+17357527 | MS.gene25182:CDS |
| CTCTCGCTGTTTGCTCAGTT+TGG | 0.325357 | 1.3:+17357314 | MS.gene25182:CDS |
| GTTTGAGTTTAGGAACAATT+TGG | 0.329929 | 1.3:+17353217 | MS.gene25182:CDS |
| GCACAGATTCCTATATTTGA+TGG | 0.344926 | 1.3:+17354839 | MS.gene25182:intron |
| TGCTTCTGTTGAATTTGCTC+AGG | 0.378400 | 1.3:+17353244 | MS.gene25182:CDS |
| AAGGGAATCTCATTGCATTC+GGG | 0.378736 | 1.3:+17353143 | MS.gene25182:CDS |
| AACCACTGGCAGCCAATTGC+AGG | 0.384480 | 1.3:-17355898 | None:intergenic |
| AGATTGTGTCCTGGATTTGC+AGG | 0.390889 | 1.3:+17353182 | MS.gene25182:CDS |
| GAAGTGGTTGGAGTAACTTA+TGG | 0.399861 | 1.3:+17355013 | MS.gene25182:CDS |
| GAAGGGAATCTCATTGCATT+CGG | 0.408598 | 1.3:+17353142 | MS.gene25182:CDS |
| AAGGGAATGGGTGGCAGCCT+TGG | 0.414177 | 1.3:+17354868 | MS.gene25182:CDS |
| GTAAAGATGGTGTGAGGATT+AGG | 0.425255 | 1.3:+17353291 | MS.gene25182:CDS |
| TGATGGGTCGGCAAGGGAAT+GGG | 0.430915 | 1.3:+17354856 | MS.gene25182:CDS |
| GAGATAGCAACTGATGTTGA+TGG | 0.431683 | 1.3:+17354905 | MS.gene25182:CDS |
| TTTGCTCAGTTTGGTAATCA+AGG | 0.435061 | 1.3:+17357323 | MS.gene25182:CDS |
| CTTGCCGACCCATCAAATAT+AGG | 0.436140 | 1.3:-17354848 | None:intergenic |
| TGTACTACTTTGTGTAAAGA+TGG | 0.443962 | 1.3:+17353278 | MS.gene25182:CDS |
| TTGATGGGTCGGCAAGGGAA+TGG | 0.456583 | 1.3:+17354855 | MS.gene25182:CDS |
| ATTGAAAATTTGGATGATCA+AGG | 0.461008 | 1.3:+17353374 | MS.gene25182:CDS |
| GAATAAACCAAATCATCAAA+GGG | 0.461780 | 1.3:-17355931 | None:intergenic |
| TAGAAAATGCCATCGTGTGC+AGG | 0.468158 | 1.3:+17356470 | MS.gene25182:CDS |
| CATTTGCTTTCTGCGTTGGA+AGG | 0.469011 | 1.3:+17353323 | MS.gene25182:CDS |
| TGAATGAACCGATACATGTT+TGG | 0.479018 | 1.3:+17354957 | MS.gene25182:CDS |
| GTTGAGCAAATGCGAAATGC+TGG | 0.479908 | 1.3:+17356427 | MS.gene25182:CDS |
| GGAGCATTTGCTTTCTGCGT+TGG | 0.486368 | 1.3:+17353319 | MS.gene25182:CDS |
| GCATTTCCTTCAGAAGTGGT+TGG | 0.486987 | 1.3:+17355001 | MS.gene25182:CDS |
| CACAGATTCCTATATTTGAT+GGG | 0.490495 | 1.3:+17354840 | MS.gene25182:intron |
| TTTGCAGTGCTAGTAAAGGT+TGG | 0.495767 | 1.3:+17357225 | MS.gene25182:intron |
| TGATTTGGCACGCCGACTGA+TGG | 0.500609 | 1.3:+17357542 | MS.gene25182:CDS |
| CTTCCTTGACCTGCAAATCC+AGG | 0.503251 | 1.3:-17353191 | None:intergenic |
| GGCACACATAGTAGCTTACA+AGG | 0.509534 | 1.3:+17357355 | MS.gene25182:CDS |
| GGAATAAACCAAATCATCAA+AGG | 0.510304 | 1.3:-17355932 | None:intergenic |
| CGAAATGCTGGACTTATCAA+AGG | 0.510869 | 1.3:+17356439 | MS.gene25182:CDS |
| TAAGCTACTATGTGTGCCAC+TGG | 0.514194 | 1.3:-17357350 | None:intergenic |
| GAAATGCTGGACTTATCAAA+GGG | 0.514668 | 1.3:+17356440 | MS.gene25182:CDS |
| CACCTGCAATTGGCTGCCAG+TGG | 0.526884 | 1.3:+17355896 | MS.gene25182:CDS |
| GTGGCAGCCTTGGAAGAAGT+TGG | 0.528078 | 1.3:+17354878 | MS.gene25182:CDS |
| TTCACGTCATTCCCATCAGT+CGG | 0.529002 | 1.3:-17357554 | None:intergenic |
| AAGCTTCAACAAACTCTAAG+AGG | 0.529912 | 1.3:+17353107 | MS.gene25182:CDS |
| ACAAACTCTAAGAGGAATTG+TGG | 0.537569 | 1.3:+17353115 | MS.gene25182:CDS |
| GATTTGGCACGCCGACTGAT+GGG | 0.537673 | 1.3:+17357543 | MS.gene25182:CDS |
| AAGAGGAATTGTGGAGCGGA+AGG | 0.538994 | 1.3:+17353124 | MS.gene25182:CDS |
| GATTCCTATATTTGATGGGT+CGG | 0.540403 | 1.3:+17354844 | MS.gene25182:intron |
| TGCTGCATTTCCTTCAGAAG+TGG | 0.547547 | 1.3:+17354997 | MS.gene25182:CDS |
| TCTAAAATCTTGTGACGGCA+TGG | 0.551674 | 1.3:-17357278 | None:intergenic |
| CTCTAAACCAACTTCTTCCA+AGG | 0.554837 | 1.3:-17354885 | None:intergenic |
| TGAGCAAATTCAACAGAAGC+AGG | 0.556051 | 1.3:-17353242 | None:intergenic |
| CAGAACCTTCTGCATCTATG+AGG | 0.559286 | 1.3:+17355972 | MS.gene25182:CDS |
| TATATTTGATGGGTCGGCAA+GGG | 0.559364 | 1.3:+17354850 | MS.gene25182:CDS |
| TCATTCCTCCAAACATGTAT+CGG | 0.562246 | 1.3:-17354965 | None:intergenic |
| TGTCCTGGATTTGCAGGTCA+AGG | 0.566608 | 1.3:+17353188 | MS.gene25182:CDS |
| CTATATTTGATGGGTCGGCA+AGG | 0.568516 | 1.3:+17354849 | MS.gene25182:CDS |
| GATCATCAAAACTCGTCACA+TGG | 0.570839 | 1.3:+17352983 | MS.gene25182:CDS |
| AGATAGCAACTGATGTTGAT+GGG | 0.574913 | 1.3:+17354906 | MS.gene25182:CDS |
| CTGGATTTGCAGGTCAAGGA+AGG | 0.576111 | 1.3:+17353192 | MS.gene25182:CDS |
| TCTGGATAAAGCTATTTGCA+TGG | 0.578183 | 1.3:-17355953 | None:intergenic |
| AATCTCATTGCATTCGGGGA+AGG | 0.578982 | 1.3:+17353148 | MS.gene25182:CDS |
| GTTACTCCAACCACTTCTGA+AGG | 0.580389 | 1.3:-17355007 | None:intergenic |
| TTATGGCATAAACTTTCCAC+AGG | 0.581378 | 1.3:+17355030 | MS.gene25182:CDS |
| ATGAACCGATACATGTTTGG+AGG | 0.584249 | 1.3:+17354960 | MS.gene25182:CDS |
| GATTTGCAGGTCAAGGAAGG+TGG | 0.585501 | 1.3:+17353195 | MS.gene25182:CDS |
| TGGGTCGGCAAGGGAATGGG+TGG | 0.587015 | 1.3:+17354859 | MS.gene25182:CDS |
| AGGGGTTTGTAGAAAACCAC+TGG | 0.587705 | 1.3:-17355912 | None:intergenic |
| CCAAATCAAGATGTAATGCA+TGG | 0.608554 | 1.3:-17357527 | None:intergenic |
| TCGACGGTGAGATTGTGTCC+TGG | 0.609644 | 1.3:+17353173 | MS.gene25182:CDS |
| AACCTTCTGCATCTATGAGG+AGG | 0.623554 | 1.3:+17355975 | MS.gene25182:CDS |
| TAAGATCTAAAATCTTGTGA+CGG | 0.629623 | 1.3:-17357283 | None:intergenic |
| AGAGGAATTGTGGAGCGGAA+GGG | 0.632291 | 1.3:+17353125 | MS.gene25182:CDS |
| AACCTCCTCATAGATGCAGA+AGG | 0.635814 | 1.3:-17355977 | None:intergenic |
| TCATCACTGAAACGAAGAGG+TGG | 0.642947 | 1.3:-17357254 | None:intergenic |
| CTCTAAGAGGAATTGTGGAG+CGG | 0.643430 | 1.3:+17353120 | MS.gene25182:CDS |
| AAGCTACTATGTGTGCCACT+GGG | 0.645381 | 1.3:-17357349 | None:intergenic |
| GCATTCGGGGAAGGTATCGA+CGG | 0.672855 | 1.3:+17353157 | MS.gene25182:CDS |
| AATAAACCAAATCATCAAAG+GGG | 0.680069 | 1.3:-17355930 | None:intergenic |
| GGTTCATCACTGAAACGAAG+AGG | 0.683820 | 1.3:-17357257 | None:intergenic |
| TGGTGTGAGGATTAGGACTG+TGG | 0.685106 | 1.3:+17353298 | MS.gene25182:CDS |
| AGGGAATCTCATTGCATTCG+GGG | 0.699614 | 1.3:+17353144 | MS.gene25182:CDS |
| AAGCAAATACCTGCACACGA+TGG | 0.704755 | 1.3:-17356479 | None:intergenic |
| CTTTGTGTAAAGATGGTGTG+AGG | 0.705362 | 1.3:+17353285 | MS.gene25182:CDS |
| TGATCAAGGTGATGATGCCG+AGG | 0.707861 | 1.3:+17353388 | MS.gene25182:CDS |
| AATGCTGGACTTATCAAAGG+GGG | 0.708952 | 1.3:+17356442 | MS.gene25182:CDS |
| TGTATCGGTTCATTCACATG+TGG | 0.712713 | 1.3:-17354950 | None:intergenic |
| TGGTAATCAAGGACTCCCAG+TGG | 0.735252 | 1.3:+17357334 | MS.gene25182:CDS |
| AAATGCTGGACTTATCAAAG+GGG | 0.740873 | 1.3:+17356441 | MS.gene25182:CDS |
| TTACACAAAGTAGTACAAAG+CGG | 0.761682 | 1.3:-17353272 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCAAAATACATATTAAA+AGG | - | chr1.3:17357401-17357420 | None:intergenic | 10.0% |
| !! | AGTTTATTTATAACTTATTT+GGG | - | chr1.3:17354591-17354610 | None:intergenic | 10.0% |
| !!! | TTATTTTATCTTTATACATA+GGG | + | chr1.3:17353645-17353664 | MS.gene25182:intron | 10.0% |
| !!! | TTTATTTTATCTTTATACAT+AGG | + | chr1.3:17353644-17353663 | MS.gene25182:intron | 10.0% |
| !! | AAGGAAAATAAAAAAGAAAT+CGG | + | chr1.3:17355466-17355485 | MS.gene25182:intron | 15.0% |
| !! | AATAAGTTAAAAACAACTAA+AGG | + | chr1.3:17354505-17354524 | MS.gene25182:intron | 15.0% |
| !! | ATACTATAATAAACCATATT+TGG | - | chr1.3:17355495-17355514 | None:intergenic | 15.0% |
| !! | GAGTTTATTTATAACTTATT+TGG | - | chr1.3:17354592-17354611 | None:intergenic | 15.0% |
| !!! | AACAACAAATTTATTAGTTT+TGG | + | chr1.3:17355598-17355617 | MS.gene25182:intron | 15.0% |
| !!! | ACAACAAATTTATTAGTTTT+GGG | + | chr1.3:17355599-17355618 | MS.gene25182:intron | 15.0% |
| !!! | ACTTAATACTAATTTTTCAT+GGG | + | chr1.3:17355284-17355303 | MS.gene25182:intron | 15.0% |
| !!! | ATTTCTTTTTTATTTTCCTT+TGG | - | chr1.3:17355466-17355485 | None:intergenic | 15.0% |
| !!! | TACTTAATACTAATTTTTCA+TGG | + | chr1.3:17355283-17355302 | MS.gene25182:intron | 15.0% |
| !! | AATTATAATAAATCTCCAGT+AGG | - | chr1.3:17355161-17355180 | None:intergenic | 20.0% |
| !! | AGTACATGGAAATATTTAAA+TGG | - | chr1.3:17355114-17355133 | None:intergenic | 20.0% |
| !! | ATAATCTTAGAAATTGTTGA+TGG | - | chr1.3:17354125-17354144 | None:intergenic | 20.0% |
| !! | ATGAATAAGTTTCTATAAGT+GGG | + | chr1.3:17354054-17354073 | MS.gene25182:intron | 20.0% |
| !! | ATTATAATAAATCTCCAGTA+GGG | - | chr1.3:17355160-17355179 | None:intergenic | 20.0% |
| !! | ATTATTGTCAGTTATCTATT+TGG | - | chr1.3:17356171-17356190 | None:intergenic | 20.0% |
| !! | TAATCTTAGAAATTGTTGAT+GGG | - | chr1.3:17354124-17354143 | None:intergenic | 20.0% |
| !! | TCAAAATACATATTAAAAGG+AGG | - | chr1.3:17357398-17357417 | None:intergenic | 20.0% |
| !! | TCACATAAATAACTTATAAC+AGG | - | chr1.3:17354532-17354551 | None:intergenic | 20.0% |
| !! | TGGGTTAATTAATTATATCA+TGG | - | chr1.3:17354572-17354591 | None:intergenic | 20.0% |
| !! | TTATAAGTGTTTATAAGTGA+AGG | + | chr1.3:17353828-17353847 | MS.gene25182:intron | 20.0% |
| !!! | AATCAAGATTTTTCTATTAC+TGG | + | chr1.3:17356901-17356920 | MS.gene25182:intron | 20.0% |
| !!! | ACTAATAAATTTGTTGTTCT+TGG | - | chr1.3:17355596-17355615 | None:intergenic | 20.0% |
| !!! | TAGTTTTTGCAATATTACAA+TGG | - | chr1.3:17355426-17355445 | None:intergenic | 20.0% |
| !!! | TCAAAATCTTTTGTATATCA+AGG | + | chr1.3:17355799-17355818 | MS.gene25182:intron | 20.0% |
| ! | AATAAACCAAATCATCAAAG+GGG | - | chr1.3:17355933-17355952 | None:intergenic | 25.0% |
| ! | AATTCAACAGATAAGAACTA+AGG | - | chr1.3:17356341-17356360 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCTTATTTAC+TGG | + | chr1.3:17353437-17353456 | MS.gene25182:intron | 25.0% |
| ! | ATTCAACAGATAAGAACTAA+GGG | - | chr1.3:17356340-17356359 | None:intergenic | 25.0% |
| ! | ATTGAAAATTTGGATGATCA+AGG | + | chr1.3:17353374-17353393 | MS.gene25182:CDS | 25.0% |
| ! | CATGAATAAGTTTCTATAAG+TGG | + | chr1.3:17354053-17354072 | MS.gene25182:intron | 25.0% |
| ! | CTCAAATAAGTCAATACAAA+CGG | - | chr1.3:17353428-17353447 | None:intergenic | 25.0% |
| ! | GAAATAAGGTACATAAATCT+AGG | + | chr1.3:17356686-17356705 | MS.gene25182:intron | 25.0% |
| ! | GAATAAACCAAATCATCAAA+GGG | - | chr1.3:17355934-17355953 | None:intergenic | 25.0% |
| ! | GAGTTTATAATATGTGACAT+AGG | - | chr1.3:17354217-17354236 | None:intergenic | 25.0% |
| ! | GTATATGTGAAAACTGTAAA+AGG | - | chr1.3:17354239-17354258 | None:intergenic | 25.0% |
| ! | TAATACCATCTTAGAAATTG+TGG | - | chr1.3:17353893-17353912 | None:intergenic | 25.0% |
| ! | TAGGATTCAGATTGAAAATT+TGG | + | chr1.3:17353364-17353383 | MS.gene25182:CDS | 25.0% |
| ! | TCAAATAAGTCAATACAAAC+GGG | - | chr1.3:17353427-17353446 | None:intergenic | 25.0% |
| ! | TCTTTCAACCTTACAAAATT+AGG | - | chr1.3:17355232-17355251 | None:intergenic | 25.0% |
| ! | TGAATAAGTTTCTATAAGTG+GGG | + | chr1.3:17354055-17354074 | MS.gene25182:intron | 25.0% |
| ! | TGATAAAAACAACTTTGCAA+TGG | - | chr1.3:17355555-17355574 | None:intergenic | 25.0% |
| ! | TTAATCTCTAATGTAAGACA+TGG | + | chr1.3:17356808-17356827 | MS.gene25182:intron | 25.0% |
| ! | TTATAAATAAACTCCTCCAA+AGG | + | chr1.3:17354598-17354617 | MS.gene25182:intron | 25.0% |
| !! | AAATTTGAAATGAAGCAAAC+AGG | - | chr1.3:17353036-17353055 | None:intergenic | 25.0% |
| !! | AACTTCATGCATGAAATTTT+GGG | - | chr1.3:17356626-17356645 | None:intergenic | 25.0% |
| !! | AATTTGAAATGAAGCAAACA+GGG | - | chr1.3:17353035-17353054 | None:intergenic | 25.0% |
| !! | ATATTTTACACGTCTTTCAA+AGG | + | chr1.3:17355254-17355273 | MS.gene25182:intron | 25.0% |
| !! | CACAAGATTTTAGATCTTAT+TGG | + | chr1.3:17357287-17357306 | MS.gene25182:CDS | 25.0% |
| !! | CAGTTTGAAGATTTGTTTAT+TGG | + | chr1.3:17355521-17355540 | MS.gene25182:intron | 25.0% |
| !! | CATGTTAACCTAATTTTGTA+AGG | + | chr1.3:17355221-17355240 | MS.gene25182:intron | 25.0% |
| !! | GATTTATGTACCTTATTTCA+TGG | - | chr1.3:17356685-17356704 | None:intergenic | 25.0% |
| !! | TAACTTCATGCATGAAATTT+TGG | - | chr1.3:17356627-17356646 | None:intergenic | 25.0% |
| !! | TAAGATCTAAAATCTTGTGA+CGG | - | chr1.3:17357286-17357305 | None:intergenic | 25.0% |
| !! | TCTTGATTTTTGCAAAGTTT+TGG | + | chr1.3:17354413-17354432 | MS.gene25182:intron | 25.0% |
| !!! | TCAAGATGTGCATAATTTTT+TGG | - | chr1.3:17354399-17354418 | None:intergenic | 25.0% |
| !!! | TGATCTTTTAGTTGAGATTA+AGG | - | chr1.3:17356875-17356894 | None:intergenic | 25.0% |
| !!! | TTAGTTTTGGGAATTTTTAG+TGG | + | chr1.3:17355611-17355630 | MS.gene25182:intron | 25.0% |
| AAAACAGATAGTCGAAAGAA+AGG | - | chr1.3:17357047-17357066 | None:intergenic | 30.0% | |
| AAGAAATCGGAAACCAAATA+TGG | + | chr1.3:17355479-17355498 | MS.gene25182:intron | 30.0% | |
| AATGAAGGTCTGTATTTGAA+TGG | - | chr1.3:17357108-17357127 | None:intergenic | 30.0% | |
| ACGGCAAGAAAATTTAACTA+CGG | - | chr1.3:17354770-17354789 | None:intergenic | 30.0% | |
| AGTATGACACTATTTGTTTG+TGG | + | chr1.3:17356744-17356763 | MS.gene25182:intron | 30.0% | |
| ATGTCGAGAACTAAATGTAA+GGG | - | chr1.3:17354793-17354812 | None:intergenic | 30.0% | |
| CAATTAGGCACTTCAAAAAT+TGG | + | chr1.3:17357014-17357033 | MS.gene25182:intron | 30.0% | |
| CACAGATTCCTATATTTGAT+GGG | + | chr1.3:17354840-17354859 | MS.gene25182:intron | 30.0% | |
| CTTTATACATAGGGAATACA+AGG | + | chr1.3:17353654-17353673 | MS.gene25182:intron | 30.0% | |
| GAATAAGTTTCTATAAGTGG+GGG | + | chr1.3:17354056-17354075 | MS.gene25182:intron | 30.0% | |
| GATTGATACAATTGCAGTAA+GGG | - | chr1.3:17356288-17356307 | None:intergenic | 30.0% | |
| GGAAAAGATGACAATCAATA+GGG | - | chr1.3:17356315-17356334 | None:intergenic | 30.0% | |
| GGAATAAACCAAATCATCAA+AGG | - | chr1.3:17355935-17355954 | None:intergenic | 30.0% | |
| GGCAATAAATAGACTACAAA+TGG | - | chr1.3:17356018-17356037 | None:intergenic | 30.0% | |
| GTTTCTCTAAATTTGACACT+TGG | - | chr1.3:17355361-17355380 | None:intergenic | 30.0% | |
| TATGTCGAGAACTAAATGTA+AGG | - | chr1.3:17354794-17354813 | None:intergenic | 30.0% | |
| TCTCAACTTTGCAGAAAATT+GGG | - | chr1.3:17356209-17356228 | None:intergenic | 30.0% | |
| TGATTGATACAATTGCAGTA+AGG | - | chr1.3:17356289-17356308 | None:intergenic | 30.0% | |
| TGTACTACTTTGTGTAAAGA+TGG | + | chr1.3:17353278-17353297 | MS.gene25182:CDS | 30.0% | |
| TTAAAAATCATACTCGTCTC+AGG | - | chr1.3:17357475-17357494 | None:intergenic | 30.0% | |
| TTAAGAACATCCATACACAA+TGG | - | chr1.3:17354299-17354318 | None:intergenic | 30.0% | |
| TTACACAAAGTAGTACAAAG+CGG | - | chr1.3:17353275-17353294 | None:intergenic | 30.0% | |
| TTTACCACAAACCTCTAATA+AGG | + | chr1.3:17354653-17354672 | MS.gene25182:intron | 30.0% | |
| ! | AGATAGCATTTGCAATTTTG+TGG | + | chr1.3:17354732-17354751 | MS.gene25182:intron | 30.0% |
| ! | ATGAGAATAGGTGTGATTTT+GGG | - | chr1.3:17353066-17353085 | None:intergenic | 30.0% |
| ! | GTTTGAGTTTAGGAACAATT+TGG | + | chr1.3:17353217-17353236 | MS.gene25182:CDS | 30.0% |
| ! | GTTTTGCACTAAATAACACA+TGG | - | chr1.3:17356053-17356072 | None:intergenic | 30.0% |
| ! | TCTTTTCTCGTGTATTATGA+AGG | - | chr1.3:17354624-17354643 | None:intergenic | 30.0% |
| ! | TGAAGAAAACAGAAAGTACA+TGG | - | chr1.3:17355128-17355147 | None:intergenic | 30.0% |
| !! | AAAGCAAGGTTTTGTAAATC+TGG | - | chr1.3:17356128-17356147 | None:intergenic | 30.0% |
| !! | TAGAGAAACTTTTTCCCATT+AGG | + | chr1.3:17355372-17355391 | MS.gene25182:intron | 30.0% |
| !! | TGTTGTCTACTTTTCTAAGT+AGG | - | chr1.3:17354264-17354283 | None:intergenic | 30.0% |
| AAATGCTGGACTTATCAAAG+GGG | + | chr1.3:17356441-17356460 | MS.gene25182:CDS | 35.0% | |
| AACAGATAAGAACTAAGGGA+GGG | - | chr1.3:17356336-17356355 | None:intergenic | 35.0% | |
| AACTTTCCACAGGTAATGAT+AGG | + | chr1.3:17355040-17355059 | MS.gene25182:intron | 35.0% | |
| AAGCTTACGTCCATGAAATA+AGG | + | chr1.3:17356672-17356691 | MS.gene25182:intron | 35.0% | |
| AAGCTTCAACAAACTCTAAG+AGG | + | chr1.3:17353107-17353126 | MS.gene25182:CDS | 35.0% | |
| AGACTGTTGCAAAGAGTTTA+TGG | + | chr1.3:17353474-17353493 | MS.gene25182:intron | 35.0% | |
| AGATAGCAACTGATGTTGAT+GGG | + | chr1.3:17354906-17354925 | MS.gene25182:CDS | 35.0% | |
| AGCTGTACTATCCTTATTAG+AGG | - | chr1.3:17354667-17354686 | None:intergenic | 35.0% | |
| AGGAATCTGTGCAAGAATTA+AGG | - | chr1.3:17354831-17354850 | None:intergenic | 35.0% | |
| AGTCAAAGAGTTGAGTGATA+AGG | + | chr1.3:17353701-17353720 | MS.gene25182:intron | 35.0% | |
| AGTGACTTAATGTATGCATC+TGG | - | chr1.3:17356714-17356733 | None:intergenic | 35.0% | |
| ATTAAAAGGAGGAGAACCAA+AGG | - | chr1.3:17357387-17357406 | None:intergenic | 35.0% | |
| CACAAAGAGATGATGAGAAT+AGG | - | chr1.3:17353078-17353097 | None:intergenic | 35.0% | |
| CCAAATCAAGATGTAATGCA+TGG | - | chr1.3:17357530-17357549 | None:intergenic | 35.0% | |
| CCATGCATTACATCTTGATT+TGG | + | chr1.3:17357527-17357546 | MS.gene25182:CDS | 35.0% | |
| CTATCCTTATTAGAGGTTTG+TGG | - | chr1.3:17354660-17354679 | None:intergenic | 35.0% | |
| CTCTCAACTTTGCAGAAAAT+TGG | - | chr1.3:17356210-17356229 | None:intergenic | 35.0% | |
| CTGTTGCATTATCAGTCATA+GGG | - | chr1.3:17355674-17355693 | None:intergenic | 35.0% | |
| CTTAATTACATGCCTTATCC+TGG | - | chr1.3:17354176-17354195 | None:intergenic | 35.0% | |
| GAAATGCTGGACTTATCAAA+GGG | + | chr1.3:17356440-17356459 | MS.gene25182:CDS | 35.0% | |
| GCACAGATTCCTATATTTGA+TGG | + | chr1.3:17354839-17354858 | MS.gene25182:intron | 35.0% | |
| GCATCATAAGCTATCAAAAC+CGG | - | chr1.3:17356561-17356580 | None:intergenic | 35.0% | |
| GGGAAAAGATGACAATCAAT+AGG | - | chr1.3:17356316-17356335 | None:intergenic | 35.0% | |
| GTATAAGAGAGAGTGAGTTA+CGG | - | chr1.3:17353013-17353032 | None:intergenic | 35.0% | |
| GTTGGAATTTGGAAGCAATT+AGG | + | chr1.3:17356999-17357018 | MS.gene25182:intron | 35.0% | |
| TAATACACGAGAAAAGACCT+TGG | + | chr1.3:17354627-17354646 | MS.gene25182:intron | 35.0% | |
| TAGTTGCATGGTATCAAACA+AGG | - | chr1.3:17356379-17356398 | None:intergenic | 35.0% | |
| TATAAGAGAGAGTGAGTTAC+GGG | - | chr1.3:17353012-17353031 | None:intergenic | 35.0% | |
| TATCAACCTATCATTACCTG+TGG | - | chr1.3:17355049-17355068 | None:intergenic | 35.0% | |
| TATGTGACATAGGTCATGTT+TGG | - | chr1.3:17354207-17354226 | None:intergenic | 35.0% | |
| TCAACCTACAAGTTAAAGCA+GGG | - | chr1.3:17356412-17356431 | None:intergenic | 35.0% | |
| TCATTCCTCCAAACATGTAT+CGG | - | chr1.3:17354968-17354987 | None:intergenic | 35.0% | |
| TCTGGATAAAGCTATTTGCA+TGG | - | chr1.3:17355956-17355975 | None:intergenic | 35.0% | |
| TCTGTTGCATTATCAGTCAT+AGG | - | chr1.3:17355675-17355694 | None:intergenic | 35.0% | |
| TCTTCAGAGCTGTAATCTAT+TGG | + | chr1.3:17356253-17356272 | MS.gene25182:intron | 35.0% | |
| TGAATGAACCGATACATGTT+TGG | + | chr1.3:17354957-17354976 | MS.gene25182:CDS | 35.0% | |
| TGACTCTTACGATATATGCA+GGG | + | chr1.3:17357501-17357520 | MS.gene25182:intron | 35.0% | |
| TTATGGCATAAACTTTCCAC+AGG | + | chr1.3:17355030-17355049 | MS.gene25182:CDS | 35.0% | |
| TTCAGATTTCAGTGTGCTAA+TGG | - | chr1.3:17357132-17357151 | None:intergenic | 35.0% | |
| TTCTCACTTAAAGCTACCAA+AGG | + | chr1.3:17355447-17355466 | MS.gene25182:intron | 35.0% | |
| TTCTGTATGTGAGAGATGAT+TGG | + | chr1.3:17356929-17356948 | MS.gene25182:intron | 35.0% | |
| TTCTTGGAAACACATCATCT+GGG | - | chr1.3:17355580-17355599 | None:intergenic | 35.0% | |
| TTGACTCTTACGATATATGC+AGG | + | chr1.3:17357500-17357519 | MS.gene25182:intron | 35.0% | |
| TTTAATGCGTCCATTGTGTA+TGG | + | chr1.3:17354286-17354305 | MS.gene25182:intron | 35.0% | |
| ! | ACAAACTCTAAGAGGAATTG+TGG | + | chr1.3:17353115-17353134 | MS.gene25182:CDS | 35.0% |
| ! | ATAAGATGCGAAGCATTTGA+AGG | + | chr1.3:17355831-17355850 | MS.gene25182:intron | 35.0% |
| ! | ATTTTCATATCCACTCTCCT+AGG | + | chr1.3:17354690-17354709 | MS.gene25182:intron | 35.0% |
| ! | CACATCCACAATTTCTAAGA+TGG | + | chr1.3:17353885-17353904 | MS.gene25182:intron | 35.0% |
| ! | CAGATACACCTTTCTTTTAC+AGG | + | chr1.3:17355873-17355892 | MS.gene25182:intron | 35.0% |
| ! | GATGAGAATAGGTGTGATTT+TGG | - | chr1.3:17353067-17353086 | None:intergenic | 35.0% |
| ! | GATTCCTATATTTGATGGGT+CGG | + | chr1.3:17354844-17354863 | MS.gene25182:intron | 35.0% |
| ! | TACAAACCCCTTTGATGATT+TGG | + | chr1.3:17355924-17355943 | MS.gene25182:CDS | 35.0% |
| ! | TTATCCTGGTTTAGGGTTTA+GGG | - | chr1.3:17354162-17354181 | None:intergenic | 35.0% |
| ! | TTCTTTTGCAGTGCTAGTAA+AGG | + | chr1.3:17357221-17357240 | MS.gene25182:intron | 35.0% |
| ! | TTTGCTCAGTTTGGTAATCA+AGG | + | chr1.3:17357323-17357342 | MS.gene25182:CDS | 35.0% |
| ! | TTTGGTGCAGATATGATAAG+AGG | + | chr1.3:17354431-17354450 | MS.gene25182:intron | 35.0% |
| !! | AATTCTCATCCAGTTTTGTG+AGG | + | chr1.3:17353852-17353871 | MS.gene25182:intron | 35.0% |
| !! | AGAAACTTTTTCCCATTAGG+TGG | + | chr1.3:17355375-17355394 | MS.gene25182:intron | 35.0% |
| !! | ATTTTGATGAAACAGAGCCT+AGG | - | chr1.3:17354710-17354729 | None:intergenic | 35.0% |
| !! | GAAACTTTTTCCCATTAGGT+GGG | + | chr1.3:17355376-17355395 | MS.gene25182:intron | 35.0% |
| !! | TAGCTTTAATGTTCAGAGTG+AGG | - | chr1.3:17353743-17353762 | None:intergenic | 35.0% |
| !!! | ATGGCGTCTTTTGATTTATG+TGG | - | chr1.3:17355407-17355426 | None:intergenic | 35.0% |
| !!! | GTTTTGGGGTTGATAATTGT+AGG | + | chr1.3:17353345-17353364 | MS.gene25182:CDS | 35.0% |
| AAAATTCCGATTCTCACGCA+AGG | - | chr1.3:17355729-17355748 | None:intergenic | 40.0% | |
| AAATTCCGATTCTCACGCAA+GGG | - | chr1.3:17355728-17355747 | None:intergenic | 40.0% | |
| AAGGGAATCTCATTGCATTC+GGG | + | chr1.3:17353143-17353162 | MS.gene25182:CDS | 40.0% | |
| AATGCTGGACTTATCAAAGG+GGG | + | chr1.3:17356442-17356461 | MS.gene25182:CDS | 40.0% | |
| ACATGCCTTATCCTGGTTTA+GGG | - | chr1.3:17354169-17354188 | None:intergenic | 40.0% | |
| ACTCTTACGATATATGCAGG+GGG | + | chr1.3:17357503-17357522 | MS.gene25182:intron | 40.0% | |
| AGAGTTAGGCTAGAGTTAGT+TGG | + | chr1.3:17356981-17357000 | MS.gene25182:intron | 40.0% | |
| AGATGAGAGAGAGAAGAGTT+AGG | + | chr1.3:17356967-17356986 | MS.gene25182:intron | 40.0% | |
| AGGCACTTCAAAAATTGGCT+GGG | + | chr1.3:17357019-17357038 | MS.gene25182:intron | 40.0% | |
| AGGTTTGTGGTAAACTACCA+AGG | - | chr1.3:17354647-17354666 | None:intergenic | 40.0% | |
| ATGAACCGATACATGTTTGG+AGG | + | chr1.3:17354960-17354979 | MS.gene25182:CDS | 40.0% | |
| CAAAGAGTTGAGTGATAAGG+AGG | + | chr1.3:17353704-17353723 | MS.gene25182:intron | 40.0% | |
| CAACAGATAAGAACTAAGGG+AGG | - | chr1.3:17356337-17356356 | None:intergenic | 40.0% | |
| CAGTGTGCTAATGGAAATGA+AGG | - | chr1.3:17357123-17357142 | None:intergenic | 40.0% | |
| CGAAATGCTGGACTTATCAA+AGG | + | chr1.3:17356439-17356458 | MS.gene25182:CDS | 40.0% | |
| CGAGAACTAAATGTAAGGGA+CGG | - | chr1.3:17354789-17354808 | None:intergenic | 40.0% | |
| CGTCCAACACTATTAGACTT+TGG | - | chr1.3:17353993-17354012 | None:intergenic | 40.0% | |
| CTAAACCCTAAACCAGGATA+AGG | + | chr1.3:17354161-17354180 | MS.gene25182:intron | 40.0% | |
| CTAACACAACCTCACAAAAC+CGG | - | chr1.3:17353864-17353883 | None:intergenic | 40.0% | |
| CTAACACAACCTCACAAAAC+TGG | - | chr1.3:17353864-17353883 | None:intergenic | 40.0% | |
| CTCAACCTACAAGTTAAAGC+AGG | - | chr1.3:17356413-17356432 | None:intergenic | 40.0% | |
| CTCTAAACCAACTTCTTCCA+AGG | - | chr1.3:17354888-17354907 | None:intergenic | 40.0% | |
| CTTATTTCCACAAGCTCTGT+AGG | + | chr1.3:17353582-17353601 | MS.gene25182:intron | 40.0% | |
| CTTCAATACACTATCCCTAC+TGG | + | chr1.3:17355143-17355162 | MS.gene25182:intron | 40.0% | |
| CTTTGTGTAAAGATGGTGTG+AGG | + | chr1.3:17353285-17353304 | MS.gene25182:CDS | 40.0% | |
| GAAGGGAATCTCATTGCATT+CGG | + | chr1.3:17353142-17353161 | MS.gene25182:CDS | 40.0% | |
| GAAGTGGTTGGAGTAACTTA+TGG | + | chr1.3:17355013-17355032 | MS.gene25182:CDS | 40.0% | |
| GACTCTTACGATATATGCAG+GGG | + | chr1.3:17357502-17357521 | MS.gene25182:intron | 40.0% | |
| GAGATAGCAACTGATGTTGA+TGG | + | chr1.3:17354905-17354924 | MS.gene25182:CDS | 40.0% | |
| GAGTTACAAACACATTCACG+TGG | - | chr1.3:17356094-17356113 | None:intergenic | 40.0% | |
| GATCATCAAAACTCGTCACA+TGG | + | chr1.3:17352983-17353002 | MS.gene25182:CDS | 40.0% | |
| GCACCAAAGTCTAATAGTGT+TGG | + | chr1.3:17353987-17354006 | MS.gene25182:intron | 40.0% | |
| GGCTAGAGTTAGTTGGAATT+TGG | + | chr1.3:17356988-17357007 | MS.gene25182:intron | 40.0% | |
| GTAAAGATGGTGTGAGGATT+AGG | + | chr1.3:17353291-17353310 | MS.gene25182:CDS | 40.0% | |
| GTTCTTGGAAACACATCATC+TGG | - | chr1.3:17355581-17355600 | None:intergenic | 40.0% | |
| TACATGCCTTATCCTGGTTT+AGG | - | chr1.3:17354170-17354189 | None:intergenic | 40.0% | |
| TAGGCACTTCAAAAATTGGC+TGG | + | chr1.3:17357018-17357037 | MS.gene25182:intron | 40.0% | |
| TAGGGAATACAAGGATGACT+TGG | + | chr1.3:17353663-17353682 | MS.gene25182:intron | 40.0% | |
| TCATCATCTCTTTGTGCAGA+CGG | + | chr1.3:17353082-17353101 | MS.gene25182:intron | 40.0% | |
| TCATTGTAGTCACTGTAGAG+AGG | + | chr1.3:17357074-17357093 | MS.gene25182:intron | 40.0% | |
| TCGTGTATTATGAAGGCCTT+TGG | - | chr1.3:17354617-17354636 | None:intergenic | 40.0% | |
| TGAGCAAATTCAACAGAAGC+AGG | - | chr1.3:17353245-17353264 | None:intergenic | 40.0% | |
| TGATACCATGCAACTAACAC+CGG | + | chr1.3:17356383-17356402 | MS.gene25182:intron | 40.0% | |
| TGTATTATGAAGGCCTTTGG+AGG | - | chr1.3:17354614-17354633 | None:intergenic | 40.0% | |
| TGTTATCAGGTTTCGGCTAT+CGG | + | chr1.3:17353942-17353961 | MS.gene25182:intron | 40.0% | |
| TTTGCAGTGCTAGTAAAGGT+TGG | + | chr1.3:17357225-17357244 | MS.gene25182:intron | 40.0% | |
| ! | AAGGAAGGTGGTTTGAGTTT+AGG | + | chr1.3:17353207-17353226 | MS.gene25182:CDS | 40.0% |
| ! | ACAAGTTAAAGCAGGGTATC+CGG | - | chr1.3:17356405-17356424 | None:intergenic | 40.0% |
| ! | CTTATCCTGGTTTAGGGTTT+AGG | - | chr1.3:17354163-17354182 | None:intergenic | 40.0% |
| ! | CTTTGGTGCGTGGATATAAA+TGG | - | chr1.3:17353976-17353995 | None:intergenic | 40.0% |
| ! | GCTTACAAGGTTTTTGCCTT+TGG | + | chr1.3:17357368-17357387 | MS.gene25182:intron | 40.0% |
| ! | TATATTTGATGGGTCGGCAA+GGG | + | chr1.3:17354850-17354869 | MS.gene25182:CDS | 40.0% |
| ! | TCTAAAATCTTGTGACGGCA+TGG | - | chr1.3:17357281-17357300 | None:intergenic | 40.0% |
| ! | TCTAATAGTGTTGGACGTGA+GGG | + | chr1.3:17353996-17354015 | MS.gene25182:intron | 40.0% |
| ! | TGCTTCTGTTGAATTTGCTC+AGG | + | chr1.3:17353244-17353263 | MS.gene25182:CDS | 40.0% |
| ! | TTTCTGCGTTGGAAGGTTTT+GGG | + | chr1.3:17353330-17353349 | MS.gene25182:CDS | 40.0% |
| !! | CAGTTTTGTGAGGTTGTGTT+AGG | + | chr1.3:17353862-17353881 | MS.gene25182:intron | 40.0% |
| !! | GACCACTTGTTATCAGGTTT+CGG | + | chr1.3:17353935-17353954 | MS.gene25182:intron | 40.0% |
| !! | GAGCTGTAATCTATTGGTTC+TGG | + | chr1.3:17356259-17356278 | MS.gene25182:intron | 40.0% |
| !! | GATACCCTGCTTTAACTTGT+AGG | + | chr1.3:17356405-17356424 | MS.gene25182:intron | 40.0% |
| !! | GGATGACTTGGTGATTAAAG+TGG | + | chr1.3:17353675-17353694 | MS.gene25182:intron | 40.0% |
| !! | TGACTTGGTGATTAAAGTGG+AGG | + | chr1.3:17353678-17353697 | MS.gene25182:intron | 40.0% |
| !! | TGTATCGGTTCATTCACATG+TGG | - | chr1.3:17354953-17354972 | None:intergenic | 40.0% |
| !!! | GACAACTCTAGAGTTTTCGT+AGG | + | chr1.3:17356782-17356801 | MS.gene25182:intron | 40.0% |
| AACACATGGCAACAGAAACG+AGG | - | chr1.3:17356039-17356058 | None:intergenic | 45.0% | |
| AACCTCCTCATAGATGCAGA+AGG | - | chr1.3:17355980-17355999 | None:intergenic | 45.0% | |
| AACCTTCTGCATCTATGAGG+AGG | + | chr1.3:17355975-17355994 | MS.gene25182:CDS | 45.0% | |
| AAGCAAATACCTGCACACGA+TGG | - | chr1.3:17356482-17356501 | None:intergenic | 45.0% | |
| AATCTCATTGCATTCGGGGA+AGG | + | chr1.3:17353148-17353167 | MS.gene25182:CDS | 45.0% | |
| ACGCAAGGGTAATCATGATG+GGG | - | chr1.3:17355714-17355733 | None:intergenic | 45.0% | |
| AGATTGTGTCCTGGATTTGC+AGG | + | chr1.3:17353182-17353201 | MS.gene25182:CDS | 45.0% | |
| AGCCGAAACCTGATAACAAG+TGG | - | chr1.3:17353940-17353959 | None:intergenic | 45.0% | |
| AGGGAATCTCATTGCATTCG+GGG | + | chr1.3:17353144-17353163 | MS.gene25182:CDS | 45.0% | |
| AGGGGTTTGTAGAAAACCAC+TGG | - | chr1.3:17355915-17355934 | None:intergenic | 45.0% | |
| ATCATCTCTTTGTGCAGACG+GGG | + | chr1.3:17353084-17353103 | MS.gene25182:intron | 45.0% | |
| ATGTGGCTAATCCCACCTAA+TGG | - | chr1.3:17355390-17355409 | None:intergenic | 45.0% | |
| CACGCAAGGGTAATCATGAT+GGG | - | chr1.3:17355715-17355734 | None:intergenic | 45.0% | |
| CAGAACCTTCTGCATCTATG+AGG | + | chr1.3:17355972-17355991 | MS.gene25182:CDS | 45.0% | |
| CATCATCTCTTTGTGCAGAC+GGG | + | chr1.3:17353083-17353102 | MS.gene25182:intron | 45.0% | |
| CATTTGCTTTCTGCGTTGGA+AGG | + | chr1.3:17353323-17353342 | MS.gene25182:CDS | 45.0% | |
| CTCATAGATGCAGAAGGTTC+TGG | - | chr1.3:17355974-17355993 | None:intergenic | 45.0% | |
| CTCTTACGATATATGCAGGG+GGG | + | chr1.3:17357504-17357523 | MS.gene25182:intron | 45.0% | |
| CTGATAACAAGTGGTCCAAC+AGG | - | chr1.3:17353931-17353950 | None:intergenic | 45.0% | |
| CTTGCCGACCCATCAAATAT+AGG | - | chr1.3:17354851-17354870 | None:intergenic | 45.0% | |
| GATTACCCTTGCGTGAGAAT+CGG | + | chr1.3:17355720-17355739 | MS.gene25182:intron | 45.0% | |
| GCATTTCCTTCAGAAGTGGT+TGG | + | chr1.3:17355001-17355020 | MS.gene25182:CDS | 45.0% | |
| GGCACACATAGTAGCTTACA+AGG | + | chr1.3:17357355-17357374 | MS.gene25182:CDS | 45.0% | |
| GGTGCGTGGATATAAATGGT+GGG | - | chr1.3:17353972-17353991 | None:intergenic | 45.0% | |
| GGTTCATCACTGAAACGAAG+AGG | - | chr1.3:17357260-17357279 | None:intergenic | 45.0% | |
| GTTACTCCAACCACTTCTGA+AGG | - | chr1.3:17355010-17355029 | None:intergenic | 45.0% | |
| GTTGAGCAAATGCGAAATGC+TGG | + | chr1.3:17356427-17356446 | MS.gene25182:CDS | 45.0% | |
| TAAGCTACTATGTGTGCCAC+TGG | - | chr1.3:17357353-17357372 | None:intergenic | 45.0% | |
| TAGAAAATGCCATCGTGTGC+AGG | + | chr1.3:17356470-17356489 | MS.gene25182:CDS | 45.0% | |
| TAGACCCTAAACCCTAAACC+AGG | + | chr1.3:17354155-17354174 | MS.gene25182:intron | 45.0% | |
| TCACGCAAGGGTAATCATGA+TGG | - | chr1.3:17355716-17355735 | None:intergenic | 45.0% | |
| TCATCACTGAAACGAAGAGG+TGG | - | chr1.3:17357257-17357276 | None:intergenic | 45.0% | |
| TCTATTTGGTCAACCTCGCT+TGG | - | chr1.3:17356157-17356176 | None:intergenic | 45.0% | |
| TGCAAAGTTGAGAGTTGCTG+AGG | + | chr1.3:17356216-17356235 | MS.gene25182:intron | 45.0% | |
| TGCAGGTGCCTGTAAAAGAA+AGG | - | chr1.3:17355884-17355903 | None:intergenic | 45.0% | |
| TGCTGCATTTCCTTCAGAAG+TGG | + | chr1.3:17354997-17355016 | MS.gene25182:CDS | 45.0% | |
| TGGTGCGTGGATATAAATGG+TGG | - | chr1.3:17353973-17353992 | None:intergenic | 45.0% | |
| TGTGGCTAATCCCACCTAAT+GGG | - | chr1.3:17355389-17355408 | None:intergenic | 45.0% | |
| TTGCTAGCTATCACGTAGCT+GGG | - | chr1.3:17356538-17356557 | None:intergenic | 45.0% | |
| ! | AAGCTACTATGTGTGCCACT+GGG | - | chr1.3:17357352-17357371 | None:intergenic | 45.0% |
| ! | CACTATTAGACTTTGGTGCG+TGG | - | chr1.3:17353986-17354005 | None:intergenic | 45.0% |
| ! | CTAATAGTGTTGGACGTGAG+GGG | + | chr1.3:17353997-17354016 | MS.gene25182:intron | 45.0% |
| ! | CTATATTTGATGGGTCGGCA+AGG | + | chr1.3:17354849-17354868 | MS.gene25182:CDS | 45.0% |
| ! | CTCTAAGAGGAATTGTGGAG+CGG | + | chr1.3:17353120-17353139 | MS.gene25182:CDS | 45.0% |
| ! | CTTTCTGCGTTGGAAGGTTT+TGG | + | chr1.3:17353329-17353348 | MS.gene25182:CDS | 45.0% |
| ! | CTTTTACAGGCACCTGCAAT+TGG | + | chr1.3:17355886-17355905 | MS.gene25182:intron | 45.0% |
| ! | GTCTAATAGTGTTGGACGTG+AGG | + | chr1.3:17353995-17354014 | MS.gene25182:intron | 45.0% |
| ! | TAATAGTGTTGGACGTGAGG+GGG | + | chr1.3:17353998-17354017 | MS.gene25182:intron | 45.0% |
| ! | TCGCTTGGTGGAATAAAGCA+AGG | - | chr1.3:17356142-17356161 | None:intergenic | 45.0% |
| ! | TTCTGCGTTGGAAGGTTTTG+GGG | + | chr1.3:17353331-17353350 | MS.gene25182:CDS | 45.0% |
| ! | TTGCTTTATTCCACCAAGCG+AGG | + | chr1.3:17356141-17356160 | MS.gene25182:intron | 45.0% |
| !! | CGGTTTTGTGAGGTTGTGTT+AGG | + | chr1.3:17354098-17354117 | MS.gene25182:intron | 45.0% |
| !! | CTGTTGGACCACTTGTTATC+AGG | + | chr1.3:17353929-17353948 | MS.gene25182:intron | 45.0% |
| AAGAGGAATTGTGGAGCGGA+AGG | + | chr1.3:17353124-17353143 | MS.gene25182:CDS | 50.0% | |
| ACAAGTGGTCCAACAGGTCT+TGG | - | chr1.3:17353925-17353944 | None:intergenic | 50.0% | |
| ACGTAGCTGGGCATTAGGAA+TGG | - | chr1.3:17356526-17356545 | None:intergenic | 50.0% | |
| AGAGGAATTGTGGAGCGGAA+GGG | + | chr1.3:17353125-17353144 | MS.gene25182:CDS | 50.0% | |
| ATGCCATCTCTCAACCAGTG+TGG | - | chr1.3:17354036-17354055 | None:intergenic | 50.0% | |
| ATTTGGTCAACCTCGCTTGG+TGG | - | chr1.3:17356154-17356173 | None:intergenic | 50.0% | |
| CGGGCACATAGTTCTTACCT+CGG | - | chr1.3:17353408-17353427 | None:intergenic | 50.0% | |
| CTATCACGTAGCTGGGCATT+AGG | - | chr1.3:17356531-17356550 | None:intergenic | 50.0% | |
| CTCTCGCTGTTTGCTCAGTT+TGG | + | chr1.3:17357314-17357333 | MS.gene25182:CDS | 50.0% | |
| CTGGATTTGCAGGTCAAGGA+AGG | + | chr1.3:17353192-17353211 | MS.gene25182:CDS | 50.0% | |
| CTTCCTTGACCTGCAAATCC+AGG | - | chr1.3:17353194-17353213 | None:intergenic | 50.0% | |
| GATTTGCAGGTCAAGGAAGG+TGG | + | chr1.3:17353195-17353214 | MS.gene25182:CDS | 50.0% | |
| GCGTTATCCTACAGAGCTTG+TGG | - | chr1.3:17353592-17353611 | None:intergenic | 50.0% | |
| GCTACGTGATAGCTAGCAAC+CGG | + | chr1.3:17356539-17356558 | MS.gene25182:intron | 50.0% | |
| GGTGTTAAAGAGTCCCACAC+TGG | + | chr1.3:17354019-17354038 | MS.gene25182:intron | 50.0% | |
| GTTGCTAGCTATCACGTAGC+TGG | - | chr1.3:17356539-17356558 | None:intergenic | 50.0% | |
| TCAACTCAAGCAGCAGCTTG+TGG | - | chr1.3:17355317-17355336 | None:intergenic | 50.0% | |
| TGAAACAGAGCCTAGGAGAG+TGG | - | chr1.3:17354703-17354722 | None:intergenic | 50.0% | |
| TGCCATCTCTCAACCAGTGT+GGG | - | chr1.3:17354035-17354054 | None:intergenic | 50.0% | |
| TGGTAATCAAGGACTCCCAG+TGG | + | chr1.3:17357334-17357353 | MS.gene25182:CDS | 50.0% | |
| TGGTGTGAGGATTAGGACTG+TGG | + | chr1.3:17353298-17353317 | MS.gene25182:CDS | 50.0% | |
| TGTCCTGGATTTGCAGGTCA+AGG | + | chr1.3:17353188-17353207 | MS.gene25182:CDS | 50.0% | |
| ! | ACAAGCTGCTGCTTGAGTTG+AGG | + | chr1.3:17355316-17355335 | MS.gene25182:intron | 50.0% |
| ! | ATACTCGTCTCAGGTTGCAC+AGG | - | chr1.3:17357466-17357485 | None:intergenic | 50.0% |
| ! | GCGTGGATATAAATGGTGGG+TGG | - | chr1.3:17353969-17353988 | None:intergenic | 50.0% |
| ! | GGAGCATTTGCTTTCTGCGT+TGG | + | chr1.3:17353319-17353338 | MS.gene25182:CDS | 50.0% |
| ! | GGTATCCGGTGTTAGTTGCA+TGG | - | chr1.3:17356391-17356410 | None:intergenic | 50.0% |
| ! | TGATCAAGGTGATGATGCCG+AGG | + | chr1.3:17353388-17353407 | MS.gene25182:CDS | 50.0% |
| AACCACTGGCAGCCAATTGC+AGG | - | chr1.3:17355901-17355920 | None:intergenic | 55.0% | |
| AGTGGTCCAACAGGTCTTGG+AGG | - | chr1.3:17353922-17353941 | None:intergenic | 55.0% | |
| GCAATGCTCACCTCACAAGC+CGG | + | chr1.3:17354078-17354097 | MS.gene25182:intron | 55.0% | |
| GTGGCAGCCTTGGAAGAAGT+TGG | + | chr1.3:17354878-17354897 | MS.gene25182:CDS | 55.0% | |
| TCGACGGTGAGATTGTGTCC+TGG | + | chr1.3:17353173-17353192 | MS.gene25182:CDS | 55.0% | |
| ! | GATTTGGCACGCCGACTGAT+GGG | + | chr1.3:17357543-17357562 | MS.gene25182:CDS | 55.0% |
| ! | GTCCCACACTGGTTGAGAGA+TGG | + | chr1.3:17354030-17354049 | MS.gene25182:intron | 55.0% |
| ! | TGATGGGTCGGCAAGGGAAT+GGG | + | chr1.3:17354856-17354875 | MS.gene25182:CDS | 55.0% |
| ! | TGATTTGGCACGCCGACTGA+TGG | + | chr1.3:17357542-17357561 | MS.gene25182:CDS | 55.0% |
| ! | TTGATGGGTCGGCAAGGGAA+TGG | + | chr1.3:17354855-17354874 | MS.gene25182:CDS | 55.0% |
| !! | CCTCACAAAACCGGCTTGTG+AGG | - | chr1.3:17354091-17354110 | None:intergenic | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+AGG | + | chr1.3:17354088-17354107 | MS.gene25182:intron | 55.0% |
| !! | GCATTCGGGGAAGGTATCGA+CGG | + | chr1.3:17353157-17353176 | MS.gene25182:CDS | 55.0% |
| AAGGGAATGGGTGGCAGCCT+TGG | + | chr1.3:17354868-17354887 | MS.gene25182:CDS | 60.0% | |
| CACCTGCAATTGGCTGCCAG+TGG | + | chr1.3:17355896-17355915 | MS.gene25182:CDS | 60.0% | |
| GAGCCTCCTCCAAGACCTGT+TGG | + | chr1.3:17353913-17353932 | MS.gene25182:intron | 60.0% | |
| GGTCCAACAGGTCTTGGAGG+AGG | - | chr1.3:17353919-17353938 | None:intergenic | 60.0% | |
| TGGGTCGGCAAGGGAATGGG+TGG | + | chr1.3:17354859-17354878 | MS.gene25182:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 17352961 | 17357575 | 17352961 | ID=MS.gene25182 |
| chr1.3 | mRNA | 17352961 | 17357575 | 17352961 | ID=MS.gene25182.t1;Parent=MS.gene25182 |
| chr1.3 | exon | 17352961 | 17353011 | 17352961 | ID=MS.gene25182.t1.exon1;Parent=MS.gene25182.t1 |
| chr1.3 | CDS | 17352961 | 17353011 | 17352961 | ID=cds.MS.gene25182.t1;Parent=MS.gene25182.t1 |
| chr1.3 | exon | 17353101 | 17353409 | 17353101 | ID=MS.gene25182.t1.exon2;Parent=MS.gene25182.t1 |
| chr1.3 | CDS | 17353101 | 17353409 | 17353101 | ID=cds.MS.gene25182.t1;Parent=MS.gene25182.t1 |
| chr1.3 | exon | 17354845 | 17355051 | 17354845 | ID=MS.gene25182.t1.exon3;Parent=MS.gene25182.t1 |
| chr1.3 | CDS | 17354845 | 17355051 | 17354845 | ID=cds.MS.gene25182.t1;Parent=MS.gene25182.t1 |
| chr1.3 | exon | 17355895 | 17355996 | 17355895 | ID=MS.gene25182.t1.exon4;Parent=MS.gene25182.t1 |
| chr1.3 | CDS | 17355895 | 17355996 | 17355895 | ID=cds.MS.gene25182.t1;Parent=MS.gene25182.t1 |
| chr1.3 | exon | 17356427 | 17356491 | 17356427 | ID=MS.gene25182.t1.exon5;Parent=MS.gene25182.t1 |
| chr1.3 | CDS | 17356427 | 17356491 | 17356427 | ID=cds.MS.gene25182.t1;Parent=MS.gene25182.t1 |
| chr1.3 | exon | 17357232 | 17357376 | 17357232 | ID=MS.gene25182.t1.exon6;Parent=MS.gene25182.t1 |
| chr1.3 | CDS | 17357232 | 17357376 | 17357232 | ID=cds.MS.gene25182.t1;Parent=MS.gene25182.t1 |
| chr1.3 | exon | 17357522 | 17357575 | 17357522 | ID=MS.gene25182.t1.exon7;Parent=MS.gene25182.t1 |
| chr1.3 | CDS | 17357522 | 17357575 | 17357522 | ID=cds.MS.gene25182.t1;Parent=MS.gene25182.t1 |
| Gene Sequence |
| Protein sequence |
