AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026860.t1 MTR_2g076200 97.581 372 8 1 1 372 1 371 0.0 759
MS.gene026860.t1 MTR_2g076210 75.067 373 83 5 4 372 1 367 0.0 562
MS.gene026860.t1 MTR_2g020280 50.789 380 158 5 20 372 16 393 6.43e-134 388
MS.gene026860.t1 MTR_8g077195 50.681 367 151 3 36 372 46 412 5.67e-127 371
MS.gene026860.t1 MTR_5g020580 50.000 362 149 2 43 372 55 416 3.07e-126 369
MS.gene026860.t1 MTR_1g098790 48.564 383 146 6 40 372 50 431 2.13e-121 358
MS.gene026860.t1 MTR_1g022370 51.275 353 149 7 43 372 70 422 3.49e-121 357
MS.gene026860.t1 MTR_1g088960 50.559 358 144 6 43 372 50 402 6.33e-120 353
MS.gene026860.t1 MTR_2g007930 48.670 376 145 8 43 372 54 427 6.23e-118 348
MS.gene026860.t1 MTR_2g020280 53.041 296 110 5 104 372 1 294 2.34e-103 306
MS.gene026860.t1 MTR_8g077620 45.402 348 162 10 36 363 45 384 4.35e-87 268
MS.gene026860.t1 MTR_8g077675 40.385 364 174 9 36 365 41 395 3.46e-78 246
MS.gene026860.t1 MTR_8g077650 39.222 334 157 11 50 364 22 328 1.44e-57 191
MS.gene026860.t1 MTR_8g077640 38.793 348 128 7 42 362 94 383 5.56e-56 188
MS.gene026860.t1 MTR_1g023800 48.980 98 50 0 41 138 50 147 3.98e-28 108
MS.gene026860.t1 MTR_0210s0010 38.372 86 47 1 86 171 9 88 2.25e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026860.t1 AT1G53320 71.504 379 101 3 1 372 1 379 0.0 543
MS.gene026860.t1 AT2G47900 49.020 357 153 5 43 372 52 406 7.14e-123 360
MS.gene026860.t1 AT2G47900 49.020 357 153 5 43 372 52 406 7.14e-123 360
MS.gene026860.t1 AT2G47900 48.883 358 153 5 43 372 52 407 1.04e-122 360
MS.gene026860.t1 AT2G18280 51.289 349 148 5 43 372 48 393 8.33e-120 352
MS.gene026860.t1 AT2G18280 51.289 349 148 5 43 372 48 393 8.33e-120 352
MS.gene026860.t1 AT1G76900 44.888 401 152 6 41 372 55 455 8.34e-117 347
MS.gene026860.t1 AT1G76900 44.888 401 152 6 41 372 55 455 8.34e-117 347
MS.gene026860.t1 AT1G76900 44.888 401 152 6 41 372 55 455 8.34e-117 347
MS.gene026860.t1 AT1G25280 47.423 388 145 8 43 372 59 445 5.00e-115 342
MS.gene026860.t1 AT1G47270 47.091 361 158 8 36 372 37 388 7.77e-111 329
MS.gene026860.t1 AT1G47270 47.091 361 158 8 36 372 62 413 1.24e-110 330
MS.gene026860.t1 AT1G47270 47.091 361 158 8 36 372 61 412 1.73e-110 329
MS.gene026860.t1 AT3G06380 46.883 369 160 7 31 372 21 380 3.57e-110 327
MS.gene026860.t1 AT1G43640 46.194 381 154 7 40 372 52 429 5.28e-109 326
MS.gene026860.t1 AT5G18680 48.159 353 158 7 43 372 39 389 8.39e-107 319
MS.gene026860.t1 AT1G43640 46.995 366 143 7 55 372 1 363 3.00e-106 317
MS.gene026860.t1 AT5G18680 48.797 291 125 6 104 372 9 297 1.87e-86 264
MS.gene026860.t1 AT3G06380 47.440 293 119 6 106 372 5 288 4.96e-85 260
MS.gene026860.t1 AT1G25280 46.269 268 86 7 162 372 1 267 1.26e-71 224
MS.gene026860.t1 AT1G25280 46.269 268 86 7 162 372 1 267 1.26e-71 224
MS.gene026860.t1 AT1G61940 47.126 87 46 0 46 132 1 87 1.38e-22 96.3
MS.gene026860.t1 AT1G61940 47.541 61 32 0 46 106 1 61 1.12e-13 70.5

Find 112 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGATGGTTTGGCACCATTA+TGG 0.220136 2.4:+21148908 None:intergenic
CTTCACAGCTCGGACTTTCT+TGG 0.231255 2.4:-21148964 MS.gene026860:intron
GCAGCCCTTGTCCGCCTTCC+AGG 0.253322 2.4:-21148446 MS.gene026860:CDS
GCGATATAACATACTCAGTA+TGG 0.267086 2.4:+21149860 None:intergenic
CTTTCCCTCCCGGTTGGCTT+TGG 0.300866 2.4:+21148536 None:intergenic
CTTCAAAAGGTTGAACTTGT+AGG 0.307145 2.4:+21148804 None:intergenic
CGATGGTTTGGCACCATTAT+GGG 0.310618 2.4:+21148909 None:intergenic
GTTTAGTACCAAAGCTAGTT+AGG 0.325857 2.4:+21148410 None:intergenic
GGCAAAACGCCGGCTAGCTT+TGG 0.328933 2.4:+21148882 None:intergenic
GCCATTTGCCTAACTAGCTT+TGG 0.333355 2.4:-21148418 MS.gene026860:CDS
TGGCACCATTATGGGGTGGC+TGG 0.351579 2.4:+21148917 None:intergenic
TTGAGGGCTTATCTGTTTGC+TGG 0.356555 2.4:+21148861 None:intergenic
AGGCGCCGGCGCCGGTGAAT+CGG 0.359512 2.4:-21152672 MS.gene026860:CDS
CACCGGCGCCGGCGCCTCTC+CGG 0.366254 2.4:+21152678 None:intergenic
TCGCCAGCATTCACAGATAA+AGG 0.367850 2.4:-21149922 MS.gene026860:intron
AACTAGCTTTGGTACTAAAC+TGG 0.385771 2.4:-21148407 MS.gene026860:CDS
CAAATTCTCGAAATCCTTCA+AGG 0.391328 2.4:-21152732 MS.gene026860:CDS
AACAGTACTTACATGATGTA+AGG 0.402699 2.4:+21151442 None:intergenic
TGCTGGTGCTTGAACTTTCA+TGG 0.404252 2.4:-21148610 MS.gene026860:CDS
TCTTCATCTCCTTTCCCTCC+CGG 0.407140 2.4:+21148526 None:intergenic
TATTAGCAGCTAGAAGATAT+AGG 0.409814 2.4:-21149891 MS.gene026860:CDS
GAAACGGTTCTCCTCCAGTT+TGG 0.411512 2.4:-21148505 MS.gene026860:CDS
CGTCCCCTACTTTACCAAAC+TGG 0.415882 2.4:+21148491 None:intergenic
TACTGTGGACCAAAGCCAAC+CGG 0.423752 2.4:-21148545 MS.gene026860:CDS
TTGGCCCTCTCGACTTCAAA+AGG 0.424052 2.4:+21148791 None:intergenic
AGCTTTGGCACACGATGGTT+TGG 0.427501 2.4:+21148897 None:intergenic
AAAGTTTCCTGTCTCATCAA+TGG 0.435431 2.4:-21148749 MS.gene026860:CDS
GATAGATTGAACTTCCTTGA+AGG 0.441232 2.4:+21152718 None:intergenic
ATACCTTCACCATGGACTAT+AGG 0.445930 2.4:-21148468 MS.gene026860:CDS
TCCTCCAGTTTGGTAAAGTA+GGG 0.446113 2.4:-21148495 MS.gene026860:CDS
CAAAGCCAACCGGGAGGGAA+AGG 0.450993 2.4:-21148535 MS.gene026860:CDS
CTTGTGCCTGCGTGTGTAAA+CGG 0.451934 2.4:-21152544 MS.gene026860:CDS
CTCCTCCAGTTTGGTAAAGT+AGG 0.453347 2.4:-21148496 MS.gene026860:CDS
GACCGGAGAGGCGCCGGCGC+CGG 0.462410 2.4:-21152680 MS.gene026860:CDS
GGCATGAGCATTTGCAATGC+TGG 0.463812 2.4:-21148627 MS.gene026860:CDS
AAACGCCTGGAAGGCGGACA+AGG 0.466204 2.4:+21148441 None:intergenic
GCCTCTCCGGTCATCGGAGA+CGG 0.467162 2.4:+21152691 None:intergenic
TCCGCTTTATAAGACAATGA+TGG 0.469186 2.4:+21151499 None:intergenic
ATTATCTCTGCAAGGAGATC+CGG 0.469997 2.4:+21152620 None:intergenic
ATCCGCCGATTCACCGGCGC+CGG 0.470123 2.4:+21152667 None:intergenic
TCCGATGACCGGAGAGGCGC+CGG 0.477140 2.4:-21152686 MS.gene026860:CDS
GACAGCCAGCCACCCCATAA+TGG 0.478762 2.4:-21148922 MS.gene026860:CDS
ACCAAAGCTAGTTAGGCAAA+TGG 0.480991 2.4:+21148417 None:intergenic
AAGTTTCCTGTCTCATCAAT+GGG 0.481200 2.4:-21148748 MS.gene026860:CDS
CCGCTTTATAAGACAATGAT+GGG 0.481752 2.4:+21151500 None:intergenic
CATCTCCTTTCCCTCCCGGT+TGG 0.483246 2.4:+21148530 None:intergenic
AGTGAGCACATCATCCTCCT+TGG 0.487846 2.4:+21148772 None:intergenic
TGCTGGTAACTTCGAGGCAG+GGG 0.489666 2.4:-21148833 MS.gene026860:CDS
TTAGGCAAATGGCAAACGCC+TGG 0.502545 2.4:+21148428 None:intergenic
CTTTCACCCATTGATGAGAC+AGG 0.505376 2.4:+21148742 None:intergenic
CAAGGAAGTAATGCTTATGT+TGG 0.506103 2.4:-21149817 MS.gene026860:CDS
ATGATGTAAGGGCGAGATAG+AGG 0.507033 2.4:+21151454 None:intergenic
ACGGTGCGGCCACTGTTCCT+CGG 0.508536 2.4:+21152580 None:intergenic
AGTTCCATCCGCCGATTCAC+CGG 0.510161 2.4:+21152661 None:intergenic
CTTTCAGCTGGTTGCTACTG+TGG 0.512635 2.4:-21148560 MS.gene026860:CDS
GCCGGCGCCTCTCCGGTCAT+CGG 0.514544 2.4:+21152685 None:intergenic
CCTGCTGGTAACTTCGAGGC+AGG 0.517968 2.4:-21148835 MS.gene026860:CDS
ATCAGTGAAGAACTTTCAGC+TGG 0.522886 2.4:-21148572 MS.gene026860:CDS
TGCAAATGCTCATGCCACCT+TGG 0.523848 2.4:+21148634 None:intergenic
CCCATCATTGTCTTATAAAG+CGG 0.524392 2.4:-21151500 MS.gene026860:CDS
TGGGGAAGATCACGTGGTCC+TGG 0.524705 2.4:+21151519 None:intergenic
AAGTTACCAGCAGGAACTTG+AGG 0.529054 2.4:+21148844 None:intergenic
CATCGTGTGCCAAAGCTAGC+CGG 0.534547 2.4:-21148891 MS.gene026860:CDS
ATGCTTATGTTGGCAAGCTA+AGG 0.535171 2.4:-21149807 MS.gene026860:intron
CGCCGGCGCCGGTGAATCGG+CGG 0.539043 2.4:-21152669 MS.gene026860:CDS
ATAAGCCCTCAAGTTCCTGC+TGG 0.547760 2.4:-21148850 MS.gene026860:CDS
AGTTACCAGCAGGAACTTGA+GGG 0.551679 2.4:+21148845 None:intergenic
CTGCTGGTAACTTCGAGGCA+GGG 0.552365 2.4:-21148834 MS.gene026860:CDS
ACTACACATGTCGTTAATGA+AGG 0.555255 2.4:-21152768 None:intergenic
GATGGTTTGGCACCATTATG+GGG 0.557500 2.4:+21148910 None:intergenic
AATCGGCGGATGGAACTGAT+TGG 0.560005 2.4:-21152655 MS.gene026860:CDS
GGCGCCGGTGAATCGGCGGA+TGG 0.567807 2.4:-21152665 MS.gene026860:CDS
GGCGAGATAGAGGTAAAATG+TGG 0.568448 2.4:+21151464 None:intergenic
TGATTGGTCGACCATGCTAC+CGG 0.570589 2.4:-21152639 MS.gene026860:CDS
AGTACCTGTTTAAGACAAGA+AGG 0.570907 2.4:+21152461 None:intergenic
GCTGTCGTAAATTGTGAAGT+TGG 0.573043 2.4:+21148939 None:intergenic
TCGACACCGTCTCCGATGAC+CGG 0.580542 2.4:-21152697 MS.gene026860:CDS
CAAGGGCTGCCTATAGTCCA+TGG 0.582759 2.4:+21148459 None:intergenic
TGCAAGGAGATCCGGTAGCA+TGG 0.583668 2.4:+21152628 None:intergenic
AGGGAAAGGAGATGAAGAAA+CGG 0.585294 2.4:-21148521 MS.gene026860:CDS
AACGCCTGGAAGGCGGACAA+GGG 0.585668 2.4:+21148442 None:intergenic
TCTGTTTGCTGGCAAAACGC+CGG 0.592503 2.4:+21148872 None:intergenic
TCGACGTCGCCGAGGAACAG+TGG 0.597224 2.4:-21152589 MS.gene026860:CDS
AGTTCCTGCTGGTAACTTCG+AGG 0.598795 2.4:-21148839 MS.gene026860:CDS
GCAAATGGCAAACGCCTGGA+AGG 0.600612 2.4:+21148432 None:intergenic
ACAGTACTTACATGATGTAA+GGG 0.604759 2.4:+21151443 None:intergenic
CCTGCCTCGAAGTTACCAGC+AGG 0.604926 2.4:+21148835 None:intergenic
TAAAAGAGTCGACGTCGCCG+AGG 0.606773 2.4:-21152597 MS.gene026860:CDS
CGATATAACATACTCAGTAT+GGG 0.610140 2.4:+21149861 None:intergenic
CGGCTAGCTTTGGCACACGA+TGG 0.620672 2.4:+21148892 None:intergenic
ACTGTGGACCAAAGCCAACC+GGG 0.622254 2.4:-21148544 MS.gene026860:CDS
AATGGCAAACGCCTGGAAGG+CGG 0.622747 2.4:+21148435 None:intergenic
CTGCCTATAGTCCATGGTGA+AGG 0.631313 2.4:+21148465 None:intergenic
CCTCCAGTTTGGTAAAGTAG+GGG 0.636441 2.4:-21148494 MS.gene026860:CDS
TGGACCAAAGCCAACCGGGA+GGG 0.641249 2.4:-21148540 MS.gene026860:CDS
CAATGATGGGGAAGATCACG+TGG 0.646996 2.4:+21151513 None:intergenic
CTTTCATGGTCGTGTGACAG+TGG 0.649357 2.4:-21148596 MS.gene026860:CDS
TCTTGAAGAACAAAGCTCCA+AGG 0.652245 2.4:-21148651 MS.gene026860:CDS
GTTAAGTCACCTCAACGTAA+CGG 0.655976 2.4:-21152497 MS.gene026860:CDS
CCCCTACTTTACCAAACTGG+AGG 0.658277 2.4:+21148494 None:intergenic
GGTTTGGCACCATTATGGGG+TGG 0.668160 2.4:+21148913 None:intergenic
TGAAGTCGAGAGGGCCAAGG+AGG 0.682719 2.4:-21148786 MS.gene026860:CDS
CGCTTTATAAGACAATGATG+GGG 0.686571 2.4:+21151501 None:intergenic
GTGATTGTGCCGTTACGTTG+AGG 0.690998 2.4:+21152488 None:intergenic
AGGGGACGATACCTTCACCA+TGG 0.697116 2.4:-21148476 MS.gene026860:CDS
GCAGCTAGAAGATATAGGTG+TGG 0.701333 2.4:-21149886 MS.gene026860:CDS
TGAAGAACAAAGCTCCAAGG+TGG 0.704573 2.4:-21148648 MS.gene026860:CDS
TCTCCACCGTTTACACACGC+AGG 0.710172 2.4:+21152538 None:intergenic
GATGCTGACGACTTATCACA+AGG 0.713430 2.4:-21149835 MS.gene026860:CDS
ACCGTCTCCGATGACCGGAG+AGG 0.727856 2.4:-21152692 MS.gene026860:CDS
GTGCCTGCGTGTGTAAACGG+TGG 0.728961 2.4:-21152541 MS.gene026860:CDS
GTGGACCAAAGCCAACCGGG+AGG 0.734579 2.4:-21148541 MS.gene026860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTCATTAATATATAAG+GGG - chr2.4:21150379-21150398 MS.gene026860:intron 10.0%
!! AGAAATTTCATTAATATATA+AGG - chr2.4:21150377-21150396 MS.gene026860:intron 10.0%
!! CATTTAAAAAAATAAAAATG+AGG + chr2.4:21152102-21152121 None:intergenic 10.0%
!! GAAATTTCATTAATATATAA+GGG - chr2.4:21150378-21150397 MS.gene026860:intron 10.0%
!! TAATTAGTTAGAATAATTTA+TGG - chr2.4:21148779-21148798 MS.gene026860:CDS 10.0%
!!! TTTAATTTTTTTTTTGGTTT+TGG - chr2.4:21148727-21148746 MS.gene026860:CDS 10.0%
!! AAAACCATTAATTGAATTTA+TGG - chr2.4:21152123-21152142 MS.gene026860:intron 15.0%
!! AATTTCATTAATATATAAGG+GGG - chr2.4:21150380-21150399 MS.gene026860:intron 15.0%
!! ATTAGTAGTTTAATAGAATT+TGG - chr2.4:21149129-21149148 MS.gene026860:intron 15.0%
!! ATTCACTATAGTTTAATATA+AGG + chr2.4:21151900-21151919 None:intergenic 15.0%
!! ATTGATTATGAGATTAATTA+TGG - chr2.4:21148911-21148930 MS.gene026860:CDS 15.0%
!! TATACTAATTTAGTAATTGT+AGG - chr2.4:21150632-21150651 MS.gene026860:intron 15.0%
!! TTAACTAATTTAGTAATTGT+AGG - chr2.4:21150687-21150706 MS.gene026860:intron 15.0%
!!! TAATAATGTGTTTGTTAAAT+GGG - chr2.4:21149171-21149190 MS.gene026860:intron 15.0%
!! AATAATACCAAAATCAATTC+TGG - chr2.4:21149440-21149459 MS.gene026860:intron 20.0%
!! AATCAGCAATTTATAATTGT+CGG + chr2.4:21151122-21151141 None:intergenic 20.0%
!! AATTAGTGTTAGTAGTAAAA+GGG - chr2.4:21148966-21148985 MS.gene026860:intron 20.0%
!! ACATTCTTATTATGTAAATC+TGG - chr2.4:21150605-21150624 MS.gene026860:intron 20.0%
!! ATTTACTGTAAACATATGTT+TGG - chr2.4:21150954-21150973 MS.gene026860:intron 20.0%
!! GAGATAAAATGATTTATGTT+TGG - chr2.4:21149283-21149302 MS.gene026860:intron 20.0%
!! TTGACCATAAATTCAATTAA+TGG + chr2.4:21152130-21152149 None:intergenic 20.0%
!! TTTAACAAACACATTATTAC+TGG + chr2.4:21149170-21149189 None:intergenic 20.0%
!!! ATTATTTTTGCATTTAAGCA+TGG - chr2.4:21150491-21150510 MS.gene026860:intron 20.0%
!!! ATTGATTTTGGTATTATTAG+CGG + chr2.4:21149438-21149457 None:intergenic 20.0%
!!! CAAGAGTTTTTGTATAAATA+AGG + chr2.4:21151992-21152011 None:intergenic 20.0%
!!! CTTTGATCTTAGATATTTTT+AGG + chr2.4:21151801-21151820 None:intergenic 20.0%
!!! GTAATAATGTGTTTGTTAAA+TGG - chr2.4:21149170-21149189 MS.gene026860:intron 20.0%
!!! TACATTTTCTTTGATGTTTT+GGG - chr2.4:21151165-21151184 MS.gene026860:intron 20.0%
!!! TACTTAATTCTATCATCTTT+TGG - chr2.4:21150524-21150543 MS.gene026860:intron 20.0%
!!! TGATTAACATTTTCTTCAAT+TGG - chr2.4:21149521-21149540 MS.gene026860:intron 20.0%
!!! TTAATTATGTTTTTGTTCTG+AGG - chr2.4:21149004-21149023 MS.gene026860:intron 20.0%
!!! TTACATTTTCTTTGATGTTT+TGG - chr2.4:21151164-21151183 MS.gene026860:intron 20.0%
!!! TTGGTTTTGGTTTATTTTAT+TGG - chr2.4:21148746-21148765 MS.gene026860:CDS 20.0%
!!! TTTTTATCCTTTTTGTTGAA+TGG - chr2.4:21151451-21151470 MS.gene026860:intron 20.0%
!!! TTTTTTTTTGGTTTTGGTTT+TGG - chr2.4:21148733-21148752 MS.gene026860:CDS 20.0%
! AAATGATGATAGTTAGTACA+AGG - chr2.4:21151078-21151097 MS.gene026860:intron 25.0%
! AATATATTTGTCAAACCACA+TGG - chr2.4:21150004-21150023 MS.gene026860:intron 25.0%
! ACAAATCATAGTATGCATTT+AGG + chr2.4:21150457-21150476 None:intergenic 25.0%
! ATGATAGAATTAAGTAACCA+TGG + chr2.4:21150520-21150539 None:intergenic 25.0%
! CAACCATAAGAAAACTAAAA+AGG - chr2.4:21151674-21151693 MS.gene026860:intron 25.0%
! CAATTAGTGTTAGTAGTAAA+AGG - chr2.4:21148965-21148984 MS.gene026860:intron 25.0%
! TAAAAGGATATCATACAACT+CGG + chr2.4:21149799-21149818 None:intergenic 25.0%
! TGTTAAATGGGTATTAGTAT+TGG - chr2.4:21149183-21149202 MS.gene026860:intron 25.0%
! TTAATGTAAGATACTGTCAT+TGG - chr2.4:21151481-21151500 MS.gene026860:CDS 25.0%
! TTAGTAGTAAAAGGGTTTAT+TGG - chr2.4:21148974-21148993 MS.gene026860:intron 25.0%
! TTCTTATTATGTAAATCTGG+AGG - chr2.4:21150608-21150627 MS.gene026860:intron 25.0%
! TTGAGTGTAAAAATCACATT+AGG - chr2.4:21149340-21149359 MS.gene026860:intron 25.0%
! TTGTATAAATAAGGCTAAGA+GGG + chr2.4:21151983-21152002 None:intergenic 25.0%
! TTGTTAGTTAATGAGTGATT+TGG - chr2.4:21149028-21149047 MS.gene026860:intron 25.0%
! TTTCAACCATCTATAAAAAC+AGG + chr2.4:21149764-21149783 None:intergenic 25.0%
! TTTGTATAAATAAGGCTAAG+AGG + chr2.4:21151984-21152003 None:intergenic 25.0%
!! AAAGGAACTAACTCTTTTAA+AGG - chr2.4:21151692-21151711 MS.gene026860:intron 25.0%
!! AAATGCATACTATGATTTGT+TGG - chr2.4:21150457-21150476 MS.gene026860:intron 25.0%
!! AAGCTTATCTTTTCTTATTG+TGG + chr2.4:21150260-21150279 None:intergenic 25.0%
!! AGCTTATCTTTTCTTATTGT+GGG + chr2.4:21150259-21150278 None:intergenic 25.0%
!! TTAACATTTTCTTCAATTGG+TGG - chr2.4:21149524-21149543 MS.gene026860:intron 25.0%
!!! AATGAGACATAAGTTGATTT+CGG - chr2.4:21149571-21149590 MS.gene026860:intron 25.0%
!!! GAAACATTTTATTTCTTTCC+TGG + chr2.4:21151409-21151428 None:intergenic 25.0%
!!! GATTTTAAAAATCCAAAGCA+CGG - chr2.4:21151828-21151847 MS.gene026860:intron 25.0%
!!! GTAGTTTTATGTGTTTTAAG+TGG - chr2.4:21149212-21149231 MS.gene026860:intron 25.0%
!!! GTTCCTTTTTAGTTTTCTTA+TGG + chr2.4:21151680-21151699 None:intergenic 25.0%
!!! TGGAGGAATACTTTTTTTTA+TGG - chr2.4:21149460-21149479 MS.gene026860:intron 25.0%
!!! TTGATTTTGGTATTATTAGC+GGG + chr2.4:21149437-21149456 None:intergenic 25.0%
!!! TTTTAGTTTTCTTATGGTTG+AGG + chr2.4:21151674-21151693 None:intergenic 25.0%
!!! TTTTTGCCTGTTTTTATAGA+TGG - chr2.4:21149755-21149774 MS.gene026860:intron 25.0%
AAAACTCTTGATGTGTATGT+TGG - chr2.4:21152002-21152021 MS.gene026860:intron 30.0%
AAACAACTCTCTTTCAATCA+TGG + chr2.4:21151002-21151021 None:intergenic 30.0%
AAACCAAACTAGTTAGGAAT+AGG + chr2.4:21150124-21150143 None:intergenic 30.0%
AAAGATGGAAGAATAGTGTT+CGG - chr2.4:21149236-21149255 MS.gene026860:intron 30.0%
AAAGGAATATTCACTACTAC+AGG + chr2.4:21150852-21150871 None:intergenic 30.0%
AACACTAAACCAAACTAGTT+AGG + chr2.4:21150130-21150149 None:intergenic 30.0%
AACAGTACTTACATGATGTA+AGG + chr2.4:21149718-21149737 None:intergenic 30.0%
AATACAAACCAGACATTTAC+AGG + chr2.4:21149550-21149569 None:intergenic 30.0%
AATACCAAAATCAATTCTGG+AGG - chr2.4:21149443-21149462 MS.gene026860:intron 30.0%
ACAAAAAGTTATTTGCTTCC+AGG - chr2.4:21151388-21151407 MS.gene026860:intron 30.0%
ACAGTACTTACATGATGTAA+GGG + chr2.4:21149717-21149736 None:intergenic 30.0%
ACTACTACAGGAAAAGAAAA+AGG + chr2.4:21150840-21150859 None:intergenic 30.0%
AGAGAATTAGAACTTTGTGT+TGG - chr2.4:21151603-21151622 MS.gene026860:intron 30.0%
AGTGTAAAAATCACATTAGG+AGG - chr2.4:21149343-21149362 MS.gene026860:intron 30.0%
ATGAATACAGATTTCAGCAT+AGG + chr2.4:21152055-21152074 None:intergenic 30.0%
ATGAGTAAATTGAACAAGGT+AGG + chr2.4:21150101-21150120 None:intergenic 30.0%
CACCAATATTATGTAGCTTT+GGG + chr2.4:21151942-21151961 None:intergenic 30.0%
CGATATAACATACTCAGTAT+GGG + chr2.4:21151299-21151318 None:intergenic 30.0%
GGTTTAGTGTTGTGAAATAT+CGG - chr2.4:21150139-21150158 MS.gene026860:intron 30.0%
GTAGTGTCTTAATTTCAGAT+TGG - chr2.4:21149080-21149099 MS.gene026860:intron 30.0%
GTTGATCGTATAAAGTCTAA+TGG - chr2.4:21149838-21149857 MS.gene026860:CDS 30.0%
TACTGTAAACATATGTTTGG+TGG - chr2.4:21150957-21150976 MS.gene026860:intron 30.0%
TAGGATGAGTAAATTGAACA+AGG + chr2.4:21150105-21150124 None:intergenic 30.0%
TATTAGCAGCTAGAAGATAT+AGG - chr2.4:21151266-21151285 MS.gene026860:intron 30.0%
TCACCAATATTATGTAGCTT+TGG + chr2.4:21151943-21151962 None:intergenic 30.0%
TCCAATTCTTGAGCAATTAA+TGG - chr2.4:21150921-21150940 MS.gene026860:intron 30.0%
TCCATTAATTGCTCAAGAAT+TGG + chr2.4:21150925-21150944 None:intergenic 30.0%
TGAAATCTGTATTCATAGCT+TGG - chr2.4:21152059-21152078 MS.gene026860:intron 30.0%
TGTCTTAATTTCAGATTGGT+GGG - chr2.4:21149084-21149103 MS.gene026860:intron 30.0%
! AATGTTTTCAGAGATTGAAG+TGG - chr2.4:21150323-21150342 MS.gene026860:intron 30.0%
! CTTCAAGTTAGAATCAATTC+TGG - chr2.4:21149386-21149405 MS.gene026860:intron 30.0%
! TATCCTTTTATCTTCCTATG+CGG - chr2.4:21149809-21149828 MS.gene026860:CDS 30.0%
! TTTTCCTTCTTGTCTTAAAC+AGG - chr2.4:21148692-21148711 MS.gene026860:CDS 30.0%
!! ACATCATGTAAGTACTGTTT+TGG - chr2.4:21149719-21149738 MS.gene026860:intron 30.0%
!! ATGAGACATAAGTTGATTTC+GGG - chr2.4:21149572-21149591 MS.gene026860:intron 30.0%
!! CTCTTTTAATTATCTCTGCA+AGG + chr2.4:21148548-21148567 None:intergenic 30.0%
!! TATTCCTCCAGAATTGATTT+TGG + chr2.4:21149450-21149469 None:intergenic 30.0%
!! TGTGTTTTAAGTGGAAAAGA+TGG - chr2.4:21149221-21149240 MS.gene026860:intron 30.0%
!!! GATATTTTAGCTTTCCGTTA+CGG - chr2.4:21150204-21150223 MS.gene026860:intron 30.0%
AAAATTGCTGATCCTGATAC+AGG - chr2.4:21150780-21150799 MS.gene026860:intron 35.0%
AAAGTTTCCTGTCTCATCAA+TGG - chr2.4:21152408-21152427 MS.gene026860:intron 35.0%
AAGATGGAAGAATAGTGTTC+GGG - chr2.4:21149237-21149256 MS.gene026860:intron 35.0%
AAGTTTCCTGTCTCATCAAT+GGG - chr2.4:21152409-21152428 MS.gene026860:intron 35.0%
AGATCTGCAAAACATCTCAT+TGG - chr2.4:21149877-21149896 MS.gene026860:CDS 35.0%
ATTCCTTTGTAGTAGTCATG+TGG - chr2.4:21150864-21150883 MS.gene026860:intron 35.0%
CAAATTCTCGAAATCCTTCA+AGG - chr2.4:21148425-21148444 MS.gene026860:CDS 35.0%
CAAGGAAGTAATGCTTATGT+TGG - chr2.4:21151340-21151359 MS.gene026860:intron 35.0%
CAAGTTAGAATCAATTCTGG+AGG - chr2.4:21149389-21149408 MS.gene026860:intron 35.0%
CACCCAAAGCTACATAATAT+TGG - chr2.4:21151937-21151956 MS.gene026860:intron 35.0%
CATCCTATTCCTAACTAGTT+TGG - chr2.4:21150118-21150137 MS.gene026860:intron 35.0%
CATCTCATTGGTCAAATGTA+TGG - chr2.4:21149889-21149908 MS.gene026860:CDS 35.0%
CCCATCATTGTCTTATAAAG+CGG - chr2.4:21149657-21149676 MS.gene026860:intron 35.0%
CCGCTTTATAAGACAATGAT+GGG + chr2.4:21149660-21149679 None:intergenic 35.0%
CGCTTTATAAGACAATGATG+GGG + chr2.4:21149659-21149678 None:intergenic 35.0%
CTTCAAAAGGTTGAACTTGT+AGG + chr2.4:21152356-21152375 None:intergenic 35.0%
GATAGATTGAACTTCCTTGA+AGG + chr2.4:21148442-21148461 None:intergenic 35.0%
GCGATATAACATACTCAGTA+TGG + chr2.4:21151300-21151319 None:intergenic 35.0%
GTATGGCAAACATTACTTGT+GGG - chr2.4:21149906-21149925 MS.gene026860:CDS 35.0%
GTGTCTTAATTTCAGATTGG+TGG - chr2.4:21149083-21149102 MS.gene026860:intron 35.0%
GTTTAGTACCAAAGCTAGTT+AGG + chr2.4:21152750-21152769 None:intergenic 35.0%
GTTTGTAACTGTGTGATTTG+TGG - chr2.4:21151018-21151037 MS.gene026860:intron 35.0%
TAAAAGGGTTTATTGGTGAG+TGG - chr2.4:21148981-21149000 MS.gene026860:intron 35.0%
TAATTCTCTGTTTCCTACCA+AGG + chr2.4:21151592-21151611 None:intergenic 35.0%
TATGGCAAACATTACTTGTG+GGG - chr2.4:21149907-21149926 MS.gene026860:CDS 35.0%
TCCGCTTTATAAGACAATGA+TGG + chr2.4:21149661-21149680 None:intergenic 35.0%
TGAAGACAATTCAGCAACTA+TGG + chr2.4:21152178-21152197 None:intergenic 35.0%
TGTATGGCAAACATTACTTG+TGG - chr2.4:21149905-21149924 MS.gene026860:CDS 35.0%
TTGGATATTTGCATGAGCAA+TGG - chr2.4:21149047-21149066 MS.gene026860:intron 35.0%
TTGTTGAAGATGCAATGGAA+TGG - chr2.4:21148940-21148959 MS.gene026860:CDS 35.0%
TTTATGGTGGCTCAAAATGA+TGG - chr2.4:21150182-21150201 MS.gene026860:intron 35.0%
TTTCCTTTATCTGTGAATGC+TGG + chr2.4:21151241-21151260 None:intergenic 35.0%
TTTGAAAAGAGGTTTGCACT+TGG - chr2.4:21148851-21148870 MS.gene026860:CDS 35.0%
! AGTACCTGTTTAAGACAAGA+AGG + chr2.4:21148699-21148718 None:intergenic 35.0%
! AGTGCAAACCTCTTTTCAAA+AGG + chr2.4:21148851-21148870 None:intergenic 35.0%
! CATTTTGAGCCACCATAAAA+CGG + chr2.4:21150181-21150200 None:intergenic 35.0%
! GTCGATTGATAACACTAGTT+TGG - chr2.4:21150230-21150249 MS.gene026860:intron 35.0%
! GTGCAAACCTCTTTTCAAAA+GGG + chr2.4:21148850-21148869 None:intergenic 35.0%
! TCAGATAGCAAGTCTTTTGA+TGG - chr2.4:21152439-21152458 MS.gene026860:intron 35.0%
! TCAGCAATTTTTCTAGACCT+AGG + chr2.4:21150771-21150790 None:intergenic 35.0%
! TTTGCTTGTTGAAGATGCAA+TGG - chr2.4:21148935-21148954 MS.gene026860:CDS 35.0%
! TTTTCAGAGATTGAAGTGGA+AGG - chr2.4:21150327-21150346 MS.gene026860:intron 35.0%
!! AACTAGCTTTGGTACTAAAC+TGG - chr2.4:21152750-21152769 MS.gene026860:CDS 35.0%
!! ACAAAGAAGAGCTTTGTTGT+TGG - chr2.4:21149937-21149956 MS.gene026860:intron 35.0%
!! GATTTAGCCCTTTTGAAAAG+AGG - chr2.4:21148840-21148859 MS.gene026860:CDS 35.0%
!! TATGTAGCTTTGGGTGTAAA+TGG + chr2.4:21151933-21151952 None:intergenic 35.0%
!! TGAGACATAAGTTGATTTCG+GGG - chr2.4:21149573-21149592 MS.gene026860:intron 35.0%
ACCAAAGCTAGTTAGGCAAA+TGG + chr2.4:21152743-21152762 None:intergenic 40.0%
AGAATAGTGTTCGGGAATCA+AGG - chr2.4:21149245-21149264 MS.gene026860:intron 40.0%
AGCAAGTCATCTTGGAGTAT+TGG + chr2.4:21150059-21150078 None:intergenic 40.0%
AGGGAAAGGAGATGAAGAAA+CGG - chr2.4:21152636-21152655 MS.gene026860:CDS 40.0%
ATCAGTGAAGAACTTTCAGC+TGG - chr2.4:21152585-21152604 MS.gene026860:CDS 40.0%
ATGCTTATGTTGGCAAGCTA+AGG - chr2.4:21151350-21151369 MS.gene026860:intron 40.0%
ATGTTGGTCAACAAAGTTGC+TGG - chr2.4:21152018-21152037 MS.gene026860:intron 40.0%
ATTATCTCTGCAAGGAGATC+CGG + chr2.4:21148540-21148559 None:intergenic 40.0%
CAACCACATGACTACTACAA+AGG + chr2.4:21150870-21150889 None:intergenic 40.0%
CATGAGCAATGGAAGCTATT+TGG - chr2.4:21149058-21149077 MS.gene026860:intron 40.0%
GACATAGCTTATGTAGACCT+AGG - chr2.4:21150751-21150770 MS.gene026860:intron 40.0%
GCTGTCGTAAATTGTGAAGT+TGG + chr2.4:21152221-21152240 None:intergenic 40.0%
GTACCGCATAGGAAGATAAA+AGG + chr2.4:21149815-21149834 None:intergenic 40.0%
GTTAAGTCACCTCAACGTAA+CGG - chr2.4:21148660-21148679 MS.gene026860:CDS 40.0%
TATCAATCGACGAACCGTAA+CGG + chr2.4:21150221-21150240 None:intergenic 40.0%
TCCTCCAGTTTGGTAAAGTA+GGG - chr2.4:21152662-21152681 MS.gene026860:CDS 40.0%
TCTTGAAGAACAAAGCTCCA+AGG - chr2.4:21152506-21152525 MS.gene026860:CDS 40.0%
TTGACTGAAGCAAGTCATCT+TGG + chr2.4:21150067-21150086 None:intergenic 40.0%
! AACTTTGTGTTGGCACAATC+AGG - chr2.4:21151613-21151632 MS.gene026860:intron 40.0%
! ACTTTGTGTTGGCACAATCA+GGG - chr2.4:21151614-21151633 MS.gene026860:intron 40.0%
! ATACCTTCACCATGGACTAT+AGG - chr2.4:21152689-21152708 MS.gene026860:CDS 40.0%
! ATCCTTTTTGTTGAATGGCG+TGG - chr2.4:21151456-21151475 MS.gene026860:CDS 40.0%
! GACTTGCTTCAGTCAATGTA+TGG - chr2.4:21150071-21150090 MS.gene026860:intron 40.0%
!! ATAAGTTGATTTCGGGGGTT+TGG - chr2.4:21149579-21149598 MS.gene026860:intron 40.0%
!! GAGACATAAGTTGATTTCGG+GGG - chr2.4:21149574-21149593 MS.gene026860:intron 40.0%
!! TTGGAGTATTGGACTAAGTC+TGG + chr2.4:21150048-21150067 None:intergenic 40.0%
!! TTGGTGGGTTAATACTGCTT+TGG - chr2.4:21149099-21149118 MS.gene026860:intron 40.0%
!!! TCAACCTTTTGAAGTCGAGA+GGG - chr2.4:21152362-21152381 MS.gene026860:intron 40.0%
!!! TGTTTTGATGACTTACAGCC+AGG - chr2.4:21149620-21149639 MS.gene026860:intron 40.0%
!!! TTCAACCTTTTGAAGTCGAG+AGG - chr2.4:21152361-21152380 MS.gene026860:intron 40.0%
AAGTTACCAGCAGGAACTTG+AGG + chr2.4:21152316-21152335 None:intergenic 45.0%
ACTAAGTCTGGTCAACTGAC+TGG + chr2.4:21150036-21150055 None:intergenic 45.0%
AGCAACTATGGTCAGTACTC+AGG + chr2.4:21152166-21152185 None:intergenic 45.0%
AGTTACCAGCAGGAACTTGA+GGG + chr2.4:21152315-21152334 None:intergenic 45.0%
ATGAGCAGAACAGGAAAGAG+GGG + chr2.4:21151216-21151235 None:intergenic 45.0%
ATGATGTAAGGGCGAGATAG+AGG + chr2.4:21149706-21149725 None:intergenic 45.0%
CACCACGCCATTCAACAAAA+AGG + chr2.4:21151461-21151480 None:intergenic 45.0%
CCTCCAGTTTGGTAAAGTAG+GGG - chr2.4:21152663-21152682 MS.gene026860:CDS 45.0%
CGATCAACAATGTACCGCAT+AGG + chr2.4:21149826-21149845 None:intergenic 45.0%
CTCCTCCAGTTTGGTAAAGT+AGG - chr2.4:21152661-21152680 MS.gene026860:CDS 45.0%
CTTTCACCCATTGATGAGAC+AGG + chr2.4:21152418-21152437 None:intergenic 45.0%
GATGAGCAGAACAGGAAAGA+GGG + chr2.4:21151217-21151236 None:intergenic 45.0%
GATGCTGACGACTTATCACA+AGG - chr2.4:21151322-21151341 MS.gene026860:intron 45.0%
GCAGCTAGAAGATATAGGTG+TGG - chr2.4:21151271-21151290 MS.gene026860:intron 45.0%
GCATTTAAGCATGGTGTCCA+TGG - chr2.4:21150500-21150519 MS.gene026860:intron 45.0%
GCTGAATTGTCTTCACAGCT+CGG - chr2.4:21152183-21152202 MS.gene026860:intron 45.0%
GGAGATTTCATGAGTGGCTA+AGG - chr2.4:21150401-21150420 MS.gene026860:intron 45.0%
GGCGAGATAGAGGTAAAATG+TGG + chr2.4:21149696-21149715 None:intergenic 45.0%
GTAGTCATGTGGTTGTCACA+TGG - chr2.4:21150875-21150894 MS.gene026860:intron 45.0%
GTGTTGTGAAATATCGGCCA+TGG - chr2.4:21150145-21150164 MS.gene026860:intron 45.0%
TAAGGGGGAGATTTCATGAG+TGG - chr2.4:21150395-21150414 MS.gene026860:intron 45.0%
TCGCCAGCATTCACAGATAA+AGG - chr2.4:21151235-21151254 MS.gene026860:intron 45.0%
TCTTACGCGTTTCTTCTGCT+TGG - chr2.4:21151427-21151446 MS.gene026860:intron 45.0%
TGAAGAACAAAGCTCCAAGG+TGG - chr2.4:21152509-21152528 MS.gene026860:CDS 45.0%
TGCTGGTGCTTGAACTTTCA+TGG - chr2.4:21152547-21152566 MS.gene026860:CDS 45.0%
TTGAGGGCTTATCTGTTTGC+TGG + chr2.4:21152299-21152318 None:intergenic 45.0%
TTGGTTACATTCACGATCGC+AGG - chr2.4:21149302-21149321 MS.gene026860:intron 45.0%
TTGTGAAATATCGGCCATGG+TGG - chr2.4:21150148-21150167 MS.gene026860:intron 45.0%
TTTCTCTGTTGTGATCGCCT+TGG - chr2.4:21151572-21151591 MS.gene026860:intron 45.0%
! AAAACCTTCGCTTGTTGCAG+GGG - chr2.4:21151729-21151748 MS.gene026860:intron 45.0%
! ACGATGGTTTGGCACCATTA+TGG + chr2.4:21152252-21152271 None:intergenic 45.0%
! ACTGACTGGTTAGAACCATG+TGG + chr2.4:21150022-21150041 None:intergenic 45.0%
! ATTGGTGGCCTGTAAATGTC+TGG - chr2.4:21149539-21149558 MS.gene026860:intron 45.0%
! CACAAGCGACAACGTTTTGA+CGG + chr2.4:21148599-21148618 None:intergenic 45.0%
! CGATGGTTTGGCACCATTAT+GGG + chr2.4:21152251-21152270 None:intergenic 45.0%
! GAAAACCTTCGCTTGTTGCA+GGG - chr2.4:21151728-21151747 MS.gene026860:intron 45.0%
! GATGGTTTGGCACCATTATG+GGG + chr2.4:21152250-21152269 None:intergenic 45.0%
! GCCATTTGCCTAACTAGCTT+TGG - chr2.4:21152739-21152758 MS.gene026860:CDS 45.0%
! GGTGCAAACAGGATGGATTT+CGG - chr2.4:21151750-21151769 MS.gene026860:intron 45.0%
! TGAAAACCTTCGCTTGTTGC+AGG - chr2.4:21151727-21151746 MS.gene026860:intron 45.0%
!! GTAGCTTTGGGTGTAAATGG+AGG + chr2.4:21151930-21151949 None:intergenic 45.0%
!! CAAAAAAAAAATTAAAAAAA+TGG + chr2.4:21148723-21148742 None:intergenic 5.0%
!!! AAATAAAAAAATGATTTTTT+TGG - chr2.4:21148808-21148827 MS.gene026860:CDS 5.0%
!!! CATTTTTTTAATTTTTTTTT+TGG - chr2.4:21148721-21148740 MS.gene026860:CDS 5.0%
AATCGGCGGATGGAACTGAT+TGG - chr2.4:21148502-21148521 MS.gene026860:CDS 50.0%
ACTGACTGCAAGCCTGTATC+AGG + chr2.4:21150795-21150814 None:intergenic 50.0%
AGTTCCTGCTGGTAACTTCG+AGG - chr2.4:21152318-21152337 MS.gene026860:intron 50.0%
ATAAGCCCTCAAGTTCCTGC+TGG - chr2.4:21152307-21152326 MS.gene026860:intron 50.0%
CCCCTACTTTACCAAACTGG+AGG + chr2.4:21152666-21152685 None:intergenic 50.0%
CGATGAGCAGAACAGGAAAG+AGG + chr2.4:21151218-21151237 None:intergenic 50.0%
CGTCCCCTACTTTACCAAAC+TGG + chr2.4:21152669-21152688 None:intergenic 50.0%
CTGCCTATAGTCCATGGTGA+AGG + chr2.4:21152695-21152714 None:intergenic 50.0%
CTTCACAGCTCGGACTTTCT+TGG - chr2.4:21152193-21152212 MS.gene026860:intron 50.0%
CTTGTGCCTGCGTGTGTAAA+CGG - chr2.4:21148613-21148632 MS.gene026860:CDS 50.0%
CTTTCAGCTGGTTGCTACTG+TGG - chr2.4:21152597-21152616 MS.gene026860:CDS 50.0%
CTTTCATGGTCGTGTGACAG+TGG - chr2.4:21152561-21152580 MS.gene026860:CDS 50.0%
GAAACGGTTCTCCTCCAGTT+TGG - chr2.4:21152652-21152671 MS.gene026860:CDS 50.0%
GGCATGAGCATTTGCAATGC+TGG - chr2.4:21152530-21152549 MS.gene026860:CDS 50.0%
TACTGTGGACCAAAGCCAAC+CGG - chr2.4:21152612-21152631 MS.gene026860:CDS 50.0%
TCTGTTGTGATCGCCTTGGT+AGG - chr2.4:21151576-21151595 MS.gene026860:intron 50.0%
TCTTCATCTCCTTTCCCTCC+CGG + chr2.4:21152634-21152653 None:intergenic 50.0%
TGAGCCACCATAAAACGGCA+TGG + chr2.4:21150176-21150195 None:intergenic 50.0%
TGCAAATGCTCATGCCACCT+TGG + chr2.4:21152526-21152545 None:intergenic 50.0%
TTAGGCAAATGGCAAACGCC+TGG + chr2.4:21152732-21152751 None:intergenic 50.0%
TTGGCCCTCTCGACTTCAAA+AGG + chr2.4:21152369-21152388 None:intergenic 50.0%
! AGCTTTGGCACACGATGGTT+TGG + chr2.4:21152263-21152282 None:intergenic 50.0%
! CAATGATGGGGAAGATCACG+TGG + chr2.4:21149647-21149666 None:intergenic 50.0%
! GTGATTGTGCCGTTACGTTG+AGG + chr2.4:21148672-21148691 None:intergenic 50.0%
! TCTGTTTGCTGGCAAAACGC+CGG + chr2.4:21152288-21152307 None:intergenic 50.0%
! TGATTGGTCGACCATGCTAC+CGG - chr2.4:21148518-21148537 MS.gene026860:CDS 50.0%
!!! TTTTGAAGTCGAGAGGGCCA+AGG - chr2.4:21152368-21152387 MS.gene026860:intron 50.0%
AATGGCAAACGCCTGGAAGG+CGG + chr2.4:21152725-21152744 None:intergenic 55.0%
ACTGTGGACCAAAGCCAACC+GGG - chr2.4:21152613-21152632 MS.gene026860:CDS 55.0%
AGAACAGGAAAGAGGGGCAG+GGG + chr2.4:21151210-21151229 None:intergenic 55.0%
AGGGGACGATACCTTCACCA+TGG - chr2.4:21152681-21152700 MS.gene026860:CDS 55.0%
ATGCTGGCGATGAGCAGAAC+AGG + chr2.4:21151225-21151244 None:intergenic 55.0%
CAAGGGCTGCCTATAGTCCA+TGG + chr2.4:21152701-21152720 None:intergenic 55.0%
CAGAACAGGAAAGAGGGGCA+GGG + chr2.4:21151211-21151230 None:intergenic 55.0%
CATCGTGTGCCAAAGCTAGC+CGG - chr2.4:21152266-21152285 MS.gene026860:intron 55.0%
CTGCTGGTAACTTCGAGGCA+GGG - chr2.4:21152323-21152342 MS.gene026860:intron 55.0%
GCAAATGGCAAACGCCTGGA+AGG + chr2.4:21152728-21152747 None:intergenic 55.0%
GGTTTGGCACCATTATGGGG+TGG + chr2.4:21152247-21152266 None:intergenic 55.0%
TAAAAGAGTCGACGTCGCCG+AGG - chr2.4:21148560-21148579 MS.gene026860:CDS 55.0%
TCTCCACCGTTTACACACGC+AGG + chr2.4:21148622-21148641 None:intergenic 55.0%
TGCAAGGAGATCCGGTAGCA+TGG + chr2.4:21148532-21148551 None:intergenic 55.0%
TGCTGGTAACTTCGAGGCAG+GGG - chr2.4:21152324-21152343 MS.gene026860:intron 55.0%
! CTTGTTGCAGGGGTGCAAAC+AGG - chr2.4:21151739-21151758 MS.gene026860:intron 55.0%
! TTGCAGGGGTGCAAACAGGA+TGG - chr2.4:21151743-21151762 MS.gene026860:intron 55.0%
!! AAAACGGCATGGTGCCACCA+TGG + chr2.4:21150165-21150184 None:intergenic 55.0%
!! AGTTCCATCCGCCGATTCAC+CGG + chr2.4:21148499-21148518 None:intergenic 55.0%
!! GCGACAACGTTTTGACGGTG+CGG + chr2.4:21148594-21148613 None:intergenic 55.0%
!!! GGCACCATGCCGTTTTATGG+TGG - chr2.4:21150169-21150188 MS.gene026860:intron 55.0%
!!! GGTGGCACCATGCCGTTTTA+TGG - chr2.4:21150166-21150185 MS.gene026860:intron 55.0%
AAACGCCTGGAAGGCGGACA+AGG + chr2.4:21152719-21152738 None:intergenic 60.0%
AACGCCTGGAAGGCGGACAA+GGG + chr2.4:21152718-21152737 None:intergenic 60.0%
CAAAGCCAACCGGGAGGGAA+AGG - chr2.4:21152622-21152641 MS.gene026860:CDS 60.0%
CATCTCCTTTCCCTCCCGGT+TGG + chr2.4:21152630-21152649 None:intergenic 60.0%
CCTGCCTCGAAGTTACCAGC+AGG + chr2.4:21152325-21152344 None:intergenic 60.0%
CCTGCTGGTAACTTCGAGGC+AGG - chr2.4:21152322-21152341 MS.gene026860:intron 60.0%
GACAGCCAGCCACCCCATAA+TGG - chr2.4:21152235-21152254 MS.gene026860:intron 60.0%
GCAGAACAGGAAAGAGGGGC+AGG + chr2.4:21151212-21151231 None:intergenic 60.0%
GTGCCTGCGTGTGTAAACGG+TGG - chr2.4:21148616-21148635 MS.gene026860:CDS 60.0%
TCGACACCGTCTCCGATGAC+CGG - chr2.4:21148460-21148479 MS.gene026860:CDS 60.0%
TGAAGTCGAGAGGGCCAAGG+AGG - chr2.4:21152371-21152390 MS.gene026860:intron 60.0%
TGCACCCCTGCAACAAGCGA+AGG + chr2.4:21151736-21151755 None:intergenic 60.0%
TGCAGTGCAGTGCCGTGCTT+TGG + chr2.4:21151843-21151862 None:intergenic 60.0%
TGGACCAAAGCCAACCGGGA+GGG - chr2.4:21152617-21152636 MS.gene026860:CDS 60.0%
TGGCACCATTATGGGGTGGC+TGG + chr2.4:21152243-21152262 None:intergenic 60.0%
TGGGGAAGATCACGTGGTCC+TGG + chr2.4:21149641-21149660 None:intergenic 60.0%
!! CGGCTAGCTTTGGCACACGA+TGG + chr2.4:21152268-21152287 None:intergenic 60.0%
!! CTTTCCCTCCCGGTTGGCTT+TGG + chr2.4:21152624-21152643 None:intergenic 60.0%
!! GGCAAAACGCCGGCTAGCTT+TGG + chr2.4:21152278-21152297 None:intergenic 60.0%
ACCGTCTCCGATGACCGGAG+AGG - chr2.4:21148465-21148484 MS.gene026860:CDS 65.0%
ACGGTGCGGCCACTGTTCCT+CGG + chr2.4:21148580-21148599 None:intergenic 65.0%
GCCTCTCCGGTCATCGGAGA+CGG + chr2.4:21148469-21148488 None:intergenic 65.0%
GTGGACCAAAGCCAACCGGG+AGG - chr2.4:21152616-21152635 MS.gene026860:CDS 65.0%
TCGACGTCGCCGAGGAACAG+TGG - chr2.4:21148568-21148587 MS.gene026860:CDS 65.0%
GCAGCCCTTGTCCGCCTTCC+AGG - chr2.4:21152711-21152730 MS.gene026860:CDS 70.0%
! TCCGATGACCGGAGAGGCGC+CGG - chr2.4:21148471-21148490 MS.gene026860:CDS 70.0%
!! ATCCGCCGATTCACCGGCGC+CGG + chr2.4:21148493-21148512 None:intergenic 70.0%
GCCGGCGCCTCTCCGGTCAT+CGG + chr2.4:21148475-21148494 None:intergenic 75.0%
!! AGGCGCCGGCGCCGGTGAAT+CGG - chr2.4:21148485-21148504 MS.gene026860:CDS 75.0%
!! GGCGCCGGTGAATCGGCGGA+TGG - chr2.4:21148492-21148511 MS.gene026860:CDS 75.0%
!!! CGCCGGCGCCGGTGAATCGG+CGG - chr2.4:21148488-21148507 MS.gene026860:CDS 80.0%
!!! CACCGGCGCCGGCGCCTCTC+CGG + chr2.4:21148482-21148501 None:intergenic 85.0%
!!! GACCGGAGAGGCGCCGGCGC+CGG - chr2.4:21148477-21148496 MS.gene026860:CDS 85.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 21148396 21152783 21148396 ID=MS.gene026860
chr2.4 mRNA 21148396 21152783 21148396 ID=MS.gene026860.t1;Parent=MS.gene026860
chr2.4 exon 21152466 21152783 21152466 ID=MS.gene026860.t1.exon1;Parent=MS.gene026860.t1
chr2.4 CDS 21152466 21152783 21152466 ID=cds.MS.gene026860.t1;Parent=MS.gene026860.t1
chr2.4 exon 21151454 21151541 21151454 ID=MS.gene026860.t1.exon2;Parent=MS.gene026860.t1
chr2.4 CDS 21151454 21151541 21151454 ID=cds.MS.gene026860.t1;Parent=MS.gene026860.t1
chr2.4 exon 21149808 21149937 21149808 ID=MS.gene026860.t1.exon3;Parent=MS.gene026860.t1
chr2.4 CDS 21149808 21149937 21149808 ID=cds.MS.gene026860.t1;Parent=MS.gene026860.t1
chr2.4 exon 21148396 21148978 21148396 ID=MS.gene026860.t1.exon4;Parent=MS.gene026860.t1
chr2.4 CDS 21148396 21148978 21148396 ID=cds.MS.gene026860.t1;Parent=MS.gene026860.t1
Gene Sequence

>MS.gene026860

ATGTCGTTAATGAAGGTATTTCGATCTCGCAAATTCTCGAAATCCTTCAAGGAAGTTCAATCTATCGACACCGTCTCCGATGACCGGAGAGGCGCCGGCGCCGGTGAATCGGCGGATGGAACTGATTGGTCGACCATGCTACCGGATCTCCTTGCAGAGATAATTAAAAGAGTCGACGTCGCCGAGGAACAGTGGCCGCACCGTCAAAACGTTGTCGCTTGTGCCTGCGTGTGTAAACGGTGGAGAGATATTACACGTGAGATCGTTAAGTCACCTCAACGTAACGGCACAATCACTTTTCCTTCTTGTCTTAAACAGGTACTGCCATTTTTTTAATTTTTTTTTTGGTTTTGGTTTTGGTTTATTTTATTGGTTTATGCTTTTAATTAGTTAGAATAATTTATGGATTTGAAAATAAAAAAATGATTTTTTTGGTTTTGTTTAGATTTAGCCCTTTTGAAAAGAGGTTTGCACTTGGTACTAATAATCTCTTGAATTTGTTAATTGTTTTAAGAATTGATTATGAGATTAATTATGGTTTTGCTTGTTGAAGATGCAATGGAATGGTTCAATTAGTGTTAGTAGTAAAAGGGTTTATTGGTGAGTGGTTAATTATGTTTTTGTTCTGAGGATTGTTAGTTAATGAGTGATTTGGATATTTGCATGAGCAATGGAAGCTATTTGGTAGTGTCTTAATTTCAGATTGGTGGGTTAATACTGCTTTGGAAATTGCATTAGTAGTTTAATAGAATTTGGTGTTTTAGTTTAAATCCAGTAATAATGTGTTTGTTAAATGGGTATTAGTATTGGTTTATTGTAGTTTTATGTGTTTTAAGTGGAAAAGATGGAAGAATAGTGTTCGGGAATCAAGGAACGTAAGTCATTTTGAGATAAAATGATTTATGTTTGGTTACATTCACGATCGCAGGAGTTGAACAATAAATTTGAGTGTAAAAATCACATTAGGAGGCATTAACTATAATTTTGTTTCTTCAAGTTAGAATCAATTCTGGAGGCAAAATCATTTCTAATCTAAAACCCGCTAATAATACCAAAATCAATTCTGGAGGAATACTTTTTTTTATGGTGAATGCTTTCTTTGCTTGAAGAATTTTATCATAGTGTTGATTAACATTTTCTTCAATTGGTGGCCTGTAAATGTCTGGTTTGTATTGAATGAGACATAAGTTGATTTCGGGGGTTTGGAGTTTGACAATCTTGTTATGTTTTGATGACTTACAGCCAGGACCACGTGATCTTCCCCATCATTGTCTTATAAAGCGGAGTAAGAAGACTTCCACATTTTACCTCTATCTCGCCCTTACATCATGTAAGTACTGTTTTGGTAAAATGTTTTTTTTTTTGCCTGTTTTTATAGATGGTTGAAAATTAACTATGAACCGAGTTGTATGATATCCTTTTATCTTCCTATGCGGTACATTGTTGATCGTATAAAGTCTAATGGTATATGTATATAGACTAGATCTGCAAAACATCTCATTGGTCAAATGTATGGCAAACATTACTTGTGGGGCATCAAAACAAAGAAGAGCTTTGTTGTTGGTCAACGTGTGAAATGACTTCTGTTCATTTTATAAATGAAAACTAAATATATTTGTCAAACCACATGGTTCTAACCAGTCAGTTGACCAGACTTAGTCCAATACTCCAAGATGACTTGCTTCAGTCAATGTATGGAAGACCTACCTTGTTCAATTTACTCATCCTATTCCTAACTAGTTTGGTTTAGTGTTGTGAAATATCGGCCATGGTGGCACCATGCCGTTTTATGGTGGCTCAAAATGATGGATATTTTAGCTTTCCGTTACGGTTCGTCGATTGATAACACTAGTTTGGTTTCCCACAATAAGAAAAGATAAGCTTGAAGTCTTTCAATAATAAGCTATGCACATGAACAATAATCAGAAATGTTTTCAGAGATTGAAGTGGAAGGATCTATACTTGTTGAAGTGTATAAATAAGAAATTTCATTAATATATAAGGGGGAGATTTCATGAGTGGCTAAGGCAGCTTCAAAGCAGAAGTTGTTTAAAGAAGCCTAAATGCATACTATGATTTGTTGGCAGTTAGATAGATTATTTTTGCATTTAAGCATGGTGTCCATGGTTACTTAATTCTATCATCTTTTGGTCTTACTGCATCTCATATTTCTTAGTAGTCATAAAGAGTGTGTTTCTGCTGAGAAAGAACATTCTTATTATGTAAATCTGGAGGATATACTAATTTAGTAATTGTAGGTCTTGACGTTAATTCTACTTCACTTGTTTTGATTAACTAATTTAGTAATTGTAGGTCTTGACGTTAATTCTACTTCACTTGTTTTGATTAATACGCGACATAGCTTATGTAGACCTAGGTCTAGAAAAATTGCTGATCCTGATACAGGCTTGCAGTCAGTTAGTTTTATGCTTTTCATTTTTCCTTTTTCTTTTCCTGTAGTAGTGAATATTCCTTTGTAGTAGTCATGTGGTTGTCACATGGAAAATGAAATAAAGCTATAGAATTCCAATTCTTGAGCAATTAATGGAAGCAATATTATTTACTGTAAACATATGTTTGGTGGATGTGAACTTTTGATAGATCCATGATTGAAAGAGAGTTGTTTGTAACTGTGTGATTTGTGGAGTAGTTGTTTGTAACTACGATAATGATTAAAATTTCAAATGATGATAGTTAGTACAAGGCTTATTTTTCTTAACATTCCGACAATTATAAATTGCTGATTATTGAACAAATTATTTTCTATTTTACATTTTCTTTGATGTTTTGGGAGTTGATGCTTCTTTTATTCCCCTGCCCCTCTTTCCTGTTCTGCTCATCGCCAGCATTCACAGATAAAGGAAAGTTTCTATTAGCAGCTAGAAGATATAGGTGTGGTACCCATACTGAGTATGTTATATCGCTTGATGCTGACGACTTATCACAAGGAAGTAATGCTTATGTTGGCAAGCTAAGGTAAAGCTCTCTTGCTACAAAAAGTTATTTGCTTCCAGGAAAGAAATAAAATGTTTCTTACGCGTTTCTTCTGCTTGGTTTTTTATCCTTTTTGTTGAATGGCGTGGTGTTAATGTAAGATACTGTCATTGGCAACATTTATAATGTTTTCAAAATGCTTTAGATTAGTGCTACATTTGCTGTTAAAATAGACATTCTACTTTCTCTGTTGTGATCGCCTTGGTAGGAAACAGAGAATTAGAACTTTGTGTTGGCACAATCAGGGAACTGATTAGTTACAGTTTGTGTTTTATTCAAATCCTCAACCATAAGAAAACTAAAAAGGAACTAACTCTTTTAAAGGAAATTAATTTTATGAAAACCTTCGCTTGTTGCAGGGGTGCAAACAGGATGGATTTCGGCATTGTTTTTAATATCAAAACTGCTCCTAAAAATATCTAAGATCAAAGTTTCATTGATTTTAAAAATCCAAAGCACGGCACTGCACTGCACACGATCTTAGTTTGCAGTTTCTATGTTTGTTTTCCTTATATTAAACTATAGTGAATTATTCATCCTCCATTTACACCCAAAGCTACATAATATTGGTGAAATTCTACTAATTTAAACCCTCTTAGCCTTATTTATACAAAAACTCTTGATGTGTATGTTGGTCAACAAAGTTGCTGGTTGTATTGAAACCTATGCTGAAATCTGTATTCATAGCTTGGAGATTGTCTGCTGATTTCCTCATTTTTATTTTTTTAAATGAAAAACCATTAATTGAATTTATGGTCAATCTTTTAATTTGTCCTGAGTACTGACCATAGTTGCTGAATTGTCTTCACAGCTCGGACTTTCTTGGCACCAACTTCACAATTTACGACAGCCAGCCACCCCATAATGGTGCCAAACCATCGTGTGCCAAAGCTAGCCGGCGTTTTGCCAGCAAACAGATAAGCCCTCAAGTTCCTGCTGGTAACTTCGAGGCAGGGGATGTTTCCTACAAGTTCAACCTTTTGAAGTCGAGAGGGCCAAGGAGGATGATGTGCTCACTAAAGTTTCCTGTCTCATCAATGGGTGAAAGTTCAGATAGCAAGTCTTTTGATGGTCAAAAGATGCACAGTAAAGAACATGCTGCTTCTGCGCACACAATCTTGAAGAACAAAGCTCCAAGGTGGCATGAGCATTTGCAATGCTGGTGCTTGAACTTTCATGGTCGTGTGACAGTGGCATCAGTGAAGAACTTTCAGCTGGTTGCTACTGTGGACCAAAGCCAACCGGGAGGGAAAGGAGATGAAGAAACGGTTCTCCTCCAGTTTGGTAAAGTAGGGGACGATACCTTCACCATGGACTATAGGCAGCCCTTGTCCGCCTTCCAGGCGTTTGCCATTTGCCTAACTAGCTTTGGTACTAAACTGGCTTGTGAGTAA
Protein sequence

>MS.gene026860.t1

MSLMKVFRSRKFSKSFKEVQSIDTVSDDRRGAGAGESADGTDWSTMLPDLLAEIIKRVDVAEEQWPHRQNVVACACVCKRWRDITREIVKSPQRNGTITFPSCLKQPGPRDLPHHCLIKRSKKTSTFYLYLALTSSFTDKGKFLLAARRYRCGTHTEYVISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSCAKASRRFASKQISPQVPAGNFEAGDVSYKFNLLKSRGPRRMMCSLKFPVSSMGESSDSKSFDGQKMHSKEHAASAHTILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPGGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE