Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20689.t1 | XP_013469223.1 | 99 | 402 | 4 | 0 | 1 | 402 | 1 | 402 | 5.00E-233 | 816.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20689.t1 | Q8VY21 | 72.2 | 413 | 97 | 5 | 1 | 402 | 1 | 406 | 6.8e-170 | 598.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20689.t1 | A0A072VNQ0 | 99.0 | 402 | 4 | 0 | 1 | 402 | 1 | 402 | 3.6e-233 | 816.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene20689.t1 | TF | TUB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20689 | MS.gene35064 | PPI |
| MS.gene20689 | MS.gene043867 | PPI |
| MS.gene20689 | MS.gene065836 | PPI |
| MS.gene029082 | MS.gene20689 | PPI |
| MS.gene046119 | MS.gene20689 | PPI |
| MS.gene20689 | MS.gene63735 | PPI |
| MS.gene20689 | MS.gene28762 | PPI |
| MS.gene90813 | MS.gene20689 | PPI |
| MS.gene026860 | MS.gene20689 | PPI |
| MS.gene20689 | MS.gene060774 | PPI |
| MS.gene20689 | MS.gene060581 | PPI |
| MS.gene48652 | MS.gene20689 | PPI |
| MS.gene065857 | MS.gene20689 | PPI |
| MS.gene065862 | MS.gene20689 | PPI |
| MS.gene065853 | MS.gene20689 | PPI |
| MS.gene92231 | MS.gene20689 | PPI |
| MS.gene028393 | MS.gene20689 | PPI |
| MS.gene060201 | MS.gene20689 | PPI |
| MS.gene20689 | MS.gene060202 | PPI |
| MS.gene63734 | MS.gene20689 | PPI |
| MS.gene20689 | MS.gene060580 | PPI |
| MS.gene20689 | MS.gene97334 | PPI |
| MS.gene83322 | MS.gene20689 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20689.t1 | MTR_1g088960 | 99.005 | 402 | 4 | 0 | 1 | 402 | 1 | 402 | 0.0 | 833 |
| MS.gene20689.t1 | MTR_2g020280 | 68.750 | 384 | 117 | 3 | 21 | 402 | 11 | 393 | 0.0 | 556 |
| MS.gene20689.t1 | MTR_2g020280 | 69.728 | 294 | 87 | 2 | 111 | 402 | 1 | 294 | 1.65e-153 | 435 |
| MS.gene20689.t1 | MTR_2g007930 | 53.009 | 432 | 168 | 10 | 1 | 402 | 1 | 427 | 8.31e-153 | 439 |
| MS.gene20689.t1 | MTR_5g020580 | 52.482 | 423 | 173 | 7 | 1 | 402 | 1 | 416 | 1.19e-144 | 417 |
| MS.gene20689.t1 | MTR_1g098790 | 50.572 | 437 | 175 | 10 | 1 | 402 | 1 | 431 | 8.81e-143 | 413 |
| MS.gene20689.t1 | MTR_8g077195 | 51.667 | 420 | 177 | 6 | 1 | 402 | 1 | 412 | 8.54e-142 | 410 |
| MS.gene20689.t1 | MTR_1g022370 | 55.153 | 359 | 149 | 6 | 50 | 402 | 70 | 422 | 7.51e-133 | 388 |
| MS.gene20689.t1 | MTR_2g076200 | 50.279 | 358 | 145 | 5 | 50 | 402 | 42 | 371 | 4.69e-119 | 350 |
| MS.gene20689.t1 | MTR_2g076210 | 44.875 | 361 | 161 | 8 | 50 | 402 | 37 | 367 | 8.07e-95 | 288 |
| MS.gene20689.t1 | MTR_8g077675 | 41.487 | 417 | 200 | 17 | 1 | 395 | 1 | 395 | 1.18e-82 | 258 |
| MS.gene20689.t1 | MTR_8g077620 | 38.614 | 404 | 217 | 10 | 1 | 393 | 1 | 384 | 1.01e-80 | 253 |
| MS.gene20689.t1 | MTR_8g077650 | 39.617 | 313 | 144 | 9 | 99 | 394 | 44 | 328 | 1.18e-61 | 202 |
| MS.gene20689.t1 | MTR_8g077640 | 35.589 | 399 | 189 | 12 | 1 | 392 | 46 | 383 | 3.36e-56 | 189 |
| MS.gene20689.t1 | MTR_1g023800 | 39.375 | 160 | 91 | 3 | 1 | 156 | 1 | 158 | 6.96e-30 | 113 |
| MS.gene20689.t1 | MTR_0210s0010 | 38.776 | 98 | 54 | 1 | 92 | 189 | 8 | 99 | 7.44e-14 | 67.8 |
| MS.gene20689.t1 | MTR_2g105390 | 50.000 | 62 | 24 | 1 | 340 | 401 | 305 | 359 | 2.24e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20689.t1 | AT2G47900 | 72.155 | 413 | 97 | 6 | 1 | 402 | 1 | 406 | 0.0 | 588 |
| MS.gene20689.t1 | AT2G47900 | 72.155 | 413 | 97 | 6 | 1 | 402 | 1 | 406 | 0.0 | 588 |
| MS.gene20689.t1 | AT2G47900 | 71.981 | 414 | 97 | 6 | 1 | 402 | 1 | 407 | 0.0 | 587 |
| MS.gene20689.t1 | AT3G06380 | 56.049 | 405 | 150 | 9 | 1 | 402 | 1 | 380 | 2.43e-147 | 423 |
| MS.gene20689.t1 | AT5G18680 | 58.470 | 366 | 124 | 8 | 50 | 402 | 39 | 389 | 6.44e-147 | 422 |
| MS.gene20689.t1 | AT1G43640 | 48.747 | 439 | 178 | 11 | 1 | 402 | 1 | 429 | 1.70e-140 | 407 |
| MS.gene20689.t1 | AT1G76900 | 47.380 | 458 | 182 | 9 | 1 | 402 | 1 | 455 | 5.53e-138 | 402 |
| MS.gene20689.t1 | AT1G76900 | 47.380 | 458 | 182 | 9 | 1 | 402 | 1 | 455 | 5.53e-138 | 402 |
| MS.gene20689.t1 | AT1G76900 | 47.380 | 458 | 182 | 9 | 1 | 402 | 1 | 455 | 5.53e-138 | 402 |
| MS.gene20689.t1 | AT1G25280 | 48.438 | 448 | 182 | 7 | 1 | 402 | 1 | 445 | 2.90e-136 | 397 |
| MS.gene20689.t1 | AT2G18280 | 51.238 | 404 | 184 | 6 | 1 | 402 | 1 | 393 | 1.03e-134 | 391 |
| MS.gene20689.t1 | AT2G18280 | 51.238 | 404 | 184 | 6 | 1 | 402 | 1 | 393 | 1.03e-134 | 391 |
| MS.gene20689.t1 | AT1G47270 | 53.117 | 369 | 149 | 5 | 42 | 402 | 36 | 388 | 6.89e-133 | 387 |
| MS.gene20689.t1 | AT1G47270 | 53.117 | 369 | 149 | 5 | 42 | 402 | 61 | 413 | 7.34e-133 | 387 |
| MS.gene20689.t1 | AT1G47270 | 53.117 | 369 | 149 | 5 | 42 | 402 | 60 | 412 | 9.95e-133 | 387 |
| MS.gene20689.t1 | AT1G43640 | 51.359 | 368 | 147 | 7 | 62 | 402 | 1 | 363 | 6.78e-130 | 378 |
| MS.gene20689.t1 | AT5G18680 | 58.497 | 306 | 100 | 7 | 109 | 402 | 7 | 297 | 9.42e-116 | 340 |
| MS.gene20689.t1 | AT3G06380 | 59.589 | 292 | 108 | 5 | 113 | 402 | 5 | 288 | 3.52e-113 | 333 |
| MS.gene20689.t1 | AT1G53320 | 49.036 | 363 | 152 | 6 | 48 | 402 | 42 | 379 | 5.93e-113 | 335 |
| MS.gene20689.t1 | AT1G25280 | 50.741 | 270 | 94 | 5 | 169 | 402 | 1 | 267 | 5.95e-83 | 255 |
| MS.gene20689.t1 | AT1G25280 | 50.741 | 270 | 94 | 5 | 169 | 402 | 1 | 267 | 5.95e-83 | 255 |
| MS.gene20689.t1 | AT1G61940 | 70.930 | 86 | 25 | 0 | 53 | 138 | 1 | 86 | 4.97e-40 | 144 |
| MS.gene20689.t1 | AT1G61940 | 72.131 | 61 | 17 | 0 | 53 | 113 | 1 | 61 | 1.41e-24 | 101 |
| MS.gene20689.t1 | AT1G61940 | 48.000 | 100 | 28 | 5 | 248 | 346 | 102 | 178 | 1.20e-12 | 67.8 |
Find 107 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATATCATTTCTCTAAATT+TGG | 0.095614 | 1.2:-66827773 | MS.gene20689:CDS |
| GATGCACACCCTCCAATTTA+TGG | 0.187148 | 1.2:-66827586 | MS.gene20689:CDS |
| GCAAATCTGTCTCCATAAAT+TGG | 0.193737 | 1.2:+66827574 | None:intergenic |
| TGGTAACAGATCAAACTTTC+TGG | 0.205085 | 1.2:-66827629 | MS.gene20689:intron |
| CTCATATGATCTGAATGTTT+TGG | 0.268134 | 1.2:-66827473 | MS.gene20689:CDS |
| TTAGGTTAACGATGTCATTT+AGG | 0.284142 | 1.2:-66829701 | None:intergenic |
| TCGCGTGCGCCGGTGTTTGC+AGG | 0.297366 | 1.2:-66829455 | MS.gene20689:CDS |
| AAGGGATTTGACGTGAAATT+CGG | 0.342997 | 1.2:-66829660 | MS.gene20689:CDS |
| GAAAATGTCATTCTGCAGTT+TGG | 0.348950 | 1.2:-66826892 | MS.gene20689:CDS |
| TGCATCATACACTGTAAATT+TGG | 0.359668 | 1.2:+66827603 | None:intergenic |
| CAATCACTCACAAGCAATCT+TGG | 0.389643 | 1.2:+66826780 | None:intergenic |
| TAGGATTATGCAATGTGTTA+TGG | 0.402541 | 1.2:-66827229 | MS.gene20689:CDS |
| CCTGCCTCAGCTGTTGAACC+TGG | 0.411820 | 1.2:-66827198 | MS.gene20689:CDS |
| GACAGGGAATGTCAACTTGC+TGG | 0.412110 | 1.2:+66829386 | None:intergenic |
| AGGGATTTGACGTGAAATTC+GGG | 0.417694 | 1.2:-66829659 | MS.gene20689:CDS |
| ATGGGTTGAGTCAGAGTTGT+TGG | 0.417839 | 1.2:-66829563 | MS.gene20689:CDS |
| GATCTGAAGAACGGGATAGA+TGG | 0.420581 | 1.2:+66827123 | None:intergenic |
| GACAAGTGCTACCTGCTTCA+AGG | 0.422783 | 1.2:+66829362 | None:intergenic |
| TAGTTTCCTGCAGGAACTCT+TGG | 0.422898 | 1.2:+66827511 | None:intergenic |
| TGCGTCGGGGCCACACCTCC+AGG | 0.436166 | 1.2:+66827180 | None:intergenic |
| TTATCAAAGGTGCTGCTGAT+TGG | 0.436264 | 1.2:+66827076 | None:intergenic |
| GCGCCGGTGTTTGCAGGAGT+TGG | 0.436346 | 1.2:-66829449 | MS.gene20689:CDS |
| TGTTATTGCCAATGGTGCTT+TGG | 0.443517 | 1.2:-66829595 | MS.gene20689:CDS |
| GAAGAAATTGAGTCTGCGTC+GGG | 0.444561 | 1.2:+66827166 | None:intergenic |
| GGTAACAGATCAAACTTTCT+GGG | 0.446463 | 1.2:-66827628 | MS.gene20689:intron |
| TTGAGGTTTCAGATGATACT+TGG | 0.450054 | 1.2:-66829497 | MS.gene20689:CDS |
| ATAACACATTGCATAATCCT+AGG | 0.454350 | 1.2:+66827231 | None:intergenic |
| GGTGCTTTGGTGATTGATGA+TGG | 0.458578 | 1.2:-66829582 | MS.gene20689:CDS |
| AATGCTTCAAAGGCAGAGAT+TGG | 0.458777 | 1.2:+66826829 | None:intergenic |
| TGCTGGTGTTTGAACTTCAA+TGG | 0.466360 | 1.2:-66826991 | MS.gene20689:CDS |
| GCTACCTGCTTCAAGGAGAC+AGG | 0.468323 | 1.2:+66829369 | None:intergenic |
| GAGACTTAGCCTGGTGGTGC+GGG | 0.471988 | 1.2:+66827546 | None:intergenic |
| CCAGGTTCAACAGCTGAGGC+AGG | 0.472095 | 1.2:+66827198 | None:intergenic |
| CATCATGCAGCCTGGTCCAA+GGG | 0.476151 | 1.2:-66828116 | MS.gene20689:intron |
| GAAGGAGTAGCACCTATGTT+GGG | 0.479960 | 1.2:-66827738 | MS.gene20689:CDS |
| GAGTATGATCATGGATAGGA+AGG | 0.482584 | 1.2:-66829679 | MS.gene20689:CDS |
| TGAAGTTCAAACACCAGCAT+TGG | 0.484021 | 1.2:+66826995 | None:intergenic |
| CAAAGGCAGAGATTGGATAC+TGG | 0.485873 | 1.2:+66826836 | None:intergenic |
| ATCAATCACCAAAGCACCAT+TGG | 0.486769 | 1.2:+66829587 | None:intergenic |
| GTCATTTAGGAGTATGATCA+TGG | 0.487718 | 1.2:-66829688 | MS.gene20689:CDS |
| CACTTGCTTGAGACTTAGCC+TGG | 0.491047 | 1.2:+66827537 | None:intergenic |
| TGGAGTTTCTGAGGAGGCCC+AGG | 0.493680 | 1.2:-66826914 | MS.gene20689:CDS |
| AAGAATGTTGTCGCGTGCGC+CGG | 0.493919 | 1.2:-66829465 | MS.gene20689:CDS |
| AGCTGTTGAACCTGGAGGTG+TGG | 0.496026 | 1.2:-66827190 | MS.gene20689:CDS |
| ATGAGAGAGCCCCTTGGACC+AGG | 0.496405 | 1.2:+66828106 | None:intergenic |
| GTGCTTTGGTGATTGATGAT+GGG | 0.516000 | 1.2:-66829581 | MS.gene20689:CDS |
| TCATCATGCAGCCTGGTCCA+AGG | 0.523744 | 1.2:-66828117 | MS.gene20689:intron |
| CTTTGATAAGTCAAAATGAT+GGG | 0.523813 | 1.2:-66827062 | MS.gene20689:CDS |
| AGAAGGAGTAGCACCTATGT+TGG | 0.530821 | 1.2:-66827739 | MS.gene20689:CDS |
| GCACATCCCTCAAAAGCTCA+TGG | 0.537457 | 1.2:+66829529 | None:intergenic |
| TTGCAAAGTCCCGCACCACC+AGG | 0.537675 | 1.2:-66827555 | MS.gene20689:CDS |
| TTCAACAGCTGAGGCAGGGA+TGG | 0.540786 | 1.2:+66827203 | None:intergenic |
| ATTCCCTGTCTCCTTGAAGC+AGG | 0.548762 | 1.2:-66829373 | MS.gene20689:intron |
| CAGATGATACTTGGCCGACT+CGG | 0.549792 | 1.2:-66829488 | MS.gene20689:CDS |
| CACATCCCTCAAAAGCTCAT+GGG | 0.551644 | 1.2:+66829530 | None:intergenic |
| GCATATTGCAAATGCTTCAA+AGG | 0.553851 | 1.2:+66826819 | None:intergenic |
| CCTTTGATAAGTCAAAATGA+TGG | 0.555873 | 1.2:-66827063 | MS.gene20689:CDS |
| AAAATGTTAACAGGGGCCCT+AGG | 0.556228 | 1.2:-66827248 | MS.gene20689:intron |
| TGGGTTGAGTCAGAGTTGTT+GGG | 0.556484 | 1.2:-66829562 | MS.gene20689:CDS |
| GGATGTGCTTATGAGAATTG+AGG | 0.557422 | 1.2:-66829514 | MS.gene20689:CDS |
| ATACCTCAACTTCCCAACAT+AGG | 0.558903 | 1.2:+66827726 | None:intergenic |
| GTCAACTTGCTGGACAATTG+AGG | 0.559973 | 1.2:+66829396 | None:intergenic |
| CACTGAATGAGAGAGCCCCT+TGG | 0.561004 | 1.2:+66828100 | None:intergenic |
| TCTTGGTGTCAAAGCTGCTA+AGG | 0.561466 | 1.2:+66826797 | None:intergenic |
| GAGAAATGATATAGTCAGTG+TGG | 0.564360 | 1.2:+66827782 | None:intergenic |
| AATCTGTCTCCATAAATTGG+AGG | 0.567458 | 1.2:+66827577 | None:intergenic |
| TTTGACGTGAAATTCGGGTA+TGG | 0.568681 | 1.2:-66829654 | MS.gene20689:CDS |
| TGATTGGAGATTCTCTGAGC+GGG | 0.569183 | 1.2:+66827092 | None:intergenic |
| GCACCTATGTTGGGAAGTTG+AGG | 0.569372 | 1.2:-66827729 | MS.gene20689:intron |
| TGAAGAAATTGAGTCTGCGT+CGG | 0.573052 | 1.2:+66827165 | None:intergenic |
| ATTCTGCAGTTTGGAAAAGT+CGG | 0.574704 | 1.2:-66826883 | MS.gene20689:CDS |
| TCATATGAGACATGCACGAT+GGG | 0.577709 | 1.2:+66827487 | None:intergenic |
| AAGTCAAAATGATGGGGAGC+TGG | 0.581065 | 1.2:-66827055 | MS.gene20689:CDS |
| TGGAGTTGTTCATGCCACCT+AGG | 0.583552 | 1.2:+66827015 | None:intergenic |
| TTTGCAGCCTCAACTGATGA+CGG | 0.583581 | 1.2:-66827844 | MS.gene20689:intron |
| GGCATGAACAACTCCAATGC+TGG | 0.585250 | 1.2:-66827008 | MS.gene20689:CDS |
| TGAGACTTAGCCTGGTGGTG+CGG | 0.585690 | 1.2:+66827545 | None:intergenic |
| ACGATGGGATAGTTTCCTGC+AGG | 0.585969 | 1.2:+66827502 | None:intergenic |
| GATGTTAATGTTATTGCCAA+TGG | 0.594465 | 1.2:-66829603 | MS.gene20689:CDS |
| ATCTGTCTCCATAAATTGGA+GGG | 0.597162 | 1.2:+66827578 | None:intergenic |
| ATTTGGATGATGTGTCAAGA+AGG | 0.597180 | 1.2:-66827756 | MS.gene20689:CDS |
| CTACCTGCTTCAAGGAGACA+GGG | 0.598753 | 1.2:+66829370 | None:intergenic |
| GTGTCTCCAAGAGTTCCTGC+AGG | 0.601279 | 1.2:-66827517 | MS.gene20689:CDS |
| GACACTTGCGTGCAGCAAGA+AGG | 0.601304 | 1.2:+66827815 | None:intergenic |
| CAGGTTCAACAGCTGAGGCA+GGG | 0.604724 | 1.2:+66827199 | None:intergenic |
| GAACTTGCCGTCATCAGTTG+AGG | 0.606120 | 1.2:+66827837 | None:intergenic |
| GATTGGATACTGGTAATCCA+TGG | 0.610280 | 1.2:+66826846 | None:intergenic |
| AGAAATGATATAGTCAGTGT+GGG | 0.610923 | 1.2:+66827783 | None:intergenic |
| GCCTCAGCTGTTGAACCTGG+AGG | 0.611858 | 1.2:-66827195 | MS.gene20689:CDS |
| TTAGGAGTATGATCATGGAT+AGG | 0.615050 | 1.2:-66829683 | MS.gene20689:CDS |
| AACTTGCTGGACAATTGAGG+AGG | 0.616449 | 1.2:+66829399 | None:intergenic |
| TAACACATTGCATAATCCTA+GGG | 0.617287 | 1.2:+66827232 | None:intergenic |
| ATCATGCAGCCTGGTCCAAG+GGG | 0.619178 | 1.2:-66828115 | MS.gene20689:intron |
| ACCTCCAGGTTCAACAGCTG+AGG | 0.623409 | 1.2:+66827194 | None:intergenic |
| CTGATTGGAGATTCTCTGAG+CGG | 0.624740 | 1.2:+66827091 | None:intergenic |
| ATCATATGAGACATGCACGA+TGG | 0.626290 | 1.2:+66827486 | None:intergenic |
| ACATCCCTCAAAAGCTCATG+GGG | 0.631071 | 1.2:+66829531 | None:intergenic |
| AGTATGATCATGGATAGGAA+GGG | 0.631347 | 1.2:-66829678 | MS.gene20689:CDS |
| GCAGTTTGGAAAAGTCGGAA+AGG | 0.632984 | 1.2:-66826878 | MS.gene20689:CDS |
| CGGAAAGGATGTGTTCACCA+TGG | 0.642135 | 1.2:-66826863 | MS.gene20689:CDS |
| TGCTATATTAAACGAAATCG+CGG | 0.643232 | 1.2:-66828079 | MS.gene20689:CDS |
| GCGACAACATTCTTCCGAGT+CGG | 0.645949 | 1.2:+66829474 | None:intergenic |
| TTTGATAAGTCAAAATGATG+GGG | 0.648482 | 1.2:-66827061 | MS.gene20689:CDS |
| GAGTTGGAGAGAAATTGTGA+AGG | 0.664353 | 1.2:-66829433 | MS.gene20689:CDS |
| TCTCCAACTCCTGCAAACAC+CGG | 0.665494 | 1.2:+66829446 | None:intergenic |
| AAGAAATTGAGTCTGCGTCG+GGG | 0.697436 | 1.2:+66827167 | None:intergenic |
| TTGCTTGAGACTTAGCCTGG+TGG | 0.709949 | 1.2:+66827540 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAAAAGATACATC+GGG | + | chr1.2:66827142-66827161 | None:intergenic | 15.0% |
| !! | GAAAAAAATAAAAGATACAT+CGG | + | chr1.2:66827143-66827162 | None:intergenic | 15.0% |
| !! | TAAATAAGAATTCAATATCA+GGG | + | chr1.2:66829183-66829202 | None:intergenic | 15.0% |
| !! | TGAGAAAAAGATAATAAATT+TGG | + | chr1.2:66828423-66828442 | None:intergenic | 15.0% |
| !! | AAATCAAATCAACATTACAA+AGG | + | chr1.2:66828611-66828630 | None:intergenic | 20.0% |
| !! | AATTGTTCGTTTACAAAAAT+AGG | + | chr1.2:66827674-66827693 | None:intergenic | 20.0% |
| !! | CTAAATAAGAATTCAATATC+AGG | + | chr1.2:66829184-66829203 | None:intergenic | 20.0% |
| !! | CTATATCATTTCTCTAAATT+TGG | - | chr1.2:66828700-66828719 | MS.gene20689:intron | 20.0% |
| !! | TAGTTAACAAAATGTTAACA+GGG | - | chr1.2:66829217-66829236 | MS.gene20689:intron | 20.0% |
| !! | TTAGTTAACAAAATGTTAAC+AGG | - | chr1.2:66829216-66829235 | MS.gene20689:intron | 20.0% |
| ! | ACATCTTAAATCTAAATCTC+TGG | + | chr1.2:66828468-66828487 | None:intergenic | 25.0% |
| ! | ACTAAGAAACAATCGATAAA+AGG | + | chr1.2:66829127-66829146 | None:intergenic | 25.0% |
| ! | AGTTAACAAAATGTTAACAG+GGG | - | chr1.2:66829218-66829237 | MS.gene20689:intron | 25.0% |
| ! | ATACTTTACTAACTTGAGAA+AGG | - | chr1.2:66827318-66827337 | MS.gene20689:intron | 25.0% |
| ! | ATTATTACCTATTACCTTCT+GGG | - | chr1.2:66828798-66828817 | MS.gene20689:intron | 25.0% |
| ! | CTAAGAAACAATCGATAAAA+GGG | + | chr1.2:66829126-66829145 | None:intergenic | 25.0% |
| ! | CTTTGATAAGTCAAAATGAT+GGG | - | chr1.2:66829411-66829430 | MS.gene20689:CDS | 25.0% |
| ! | TCTTAATATCATACAAGTTG+AGG | + | chr1.2:66828559-66828578 | None:intergenic | 25.0% |
| ! | TTTGATAAGTCAAAATGATG+GGG | - | chr1.2:66829412-66829431 | MS.gene20689:CDS | 25.0% |
| !! | AGATTTAGATTTAAGATGTG+TGG | - | chr1.2:66828469-66828488 | MS.gene20689:intron | 25.0% |
| !! | TCATATGATCTGAATGTTTT+GGG | - | chr1.2:66829001-66829020 | MS.gene20689:intron | 25.0% |
| !! | TTCTCAACTTTTGTTCAATT+GGG | - | chr1.2:66828208-66828227 | MS.gene20689:intron | 25.0% |
| !! | TTTCTCAACTTTTGTTCAAT+TGG | - | chr1.2:66828207-66828226 | MS.gene20689:intron | 25.0% |
| !!! | GTTTTATTCTTATCACACAA+AGG | - | chr1.2:66828277-66828296 | MS.gene20689:intron | 25.0% |
| !!! | TTTTTTCTACTAAGATGCAA+TGG | - | chr1.2:66828140-66828159 | MS.gene20689:intron | 25.0% |
| AGAAATGATATAGTCAGTGT+GGG | + | chr1.2:66828693-66828712 | None:intergenic | 30.0% | |
| ATAACACATTGCATAATCCT+AGG | + | chr1.2:66829245-66829264 | None:intergenic | 30.0% | |
| ATTCCTGCTCAACAAATATT+TGG | + | chr1.2:66827425-66827444 | None:intergenic | 30.0% | |
| CCTTTGATAAGTCAAAATGA+TGG | - | chr1.2:66829410-66829429 | MS.gene20689:CDS | 30.0% | |
| GATGTTAATGTTATTGCCAA+TGG | - | chr1.2:66826870-66826889 | MS.gene20689:CDS | 30.0% | |
| GATTATTACCTATTACCTTC+TGG | - | chr1.2:66828797-66828816 | MS.gene20689:intron | 30.0% | |
| TAACACATTGCATAATCCTA+GGG | + | chr1.2:66829244-66829263 | None:intergenic | 30.0% | |
| TAACTCACTCTATTTGAATG+AGG | + | chr1.2:66827546-66827565 | None:intergenic | 30.0% | |
| TAATCAACAAGTCATGTCAT+AGG | + | chr1.2:66828782-66828801 | None:intergenic | 30.0% | |
| TAGGATTATGCAATGTGTTA+TGG | - | chr1.2:66829244-66829263 | MS.gene20689:intron | 30.0% | |
| TGCATCATACACTGTAAATT+TGG | + | chr1.2:66828873-66828892 | None:intergenic | 30.0% | |
| TGCTATATTAAACGAAATCG+CGG | - | chr1.2:66828394-66828413 | MS.gene20689:intron | 30.0% | |
| TTCAGTTAAAAATTTCCAGC+TGG | - | chr1.2:66829520-66829539 | MS.gene20689:CDS | 30.0% | |
| TTCTATATTCTGTGACACAT+GGG | - | chr1.2:66828501-66828520 | MS.gene20689:intron | 30.0% | |
| TTTAGGTAAAGAGAATATCG+CGG | - | chr1.2:66829060-66829079 | MS.gene20689:intron | 30.0% | |
| ! | AAACCAAATATTTGTTGAGC+AGG | - | chr1.2:66827419-66827438 | MS.gene20689:intron | 30.0% |
| ! | AAATATTTGTTGAGCAGGAA+TGG | - | chr1.2:66827424-66827443 | MS.gene20689:intron | 30.0% |
| ! | CATTTTTGTAAATGAAAGCC+AGG | - | chr1.2:66827599-66827618 | MS.gene20689:CDS | 30.0% |
| ! | CTCATATGATCTGAATGTTT+TGG | - | chr1.2:66829000-66829019 | MS.gene20689:intron | 30.0% |
| ! | TACATCCTTTTGAACTGAAA+TGG | + | chr1.2:66828019-66828038 | None:intergenic | 30.0% |
| !! | GTTGATTTTGATCTGAAGAA+CGG | + | chr1.2:66829362-66829381 | None:intergenic | 30.0% |
| !! | TTGATTTTGATCTGAAGAAC+GGG | + | chr1.2:66829361-66829380 | None:intergenic | 30.0% |
| !!! | CCATCATTTTGACTTATCAA+AGG | + | chr1.2:66829413-66829432 | None:intergenic | 30.0% |
| !!! | GAAATCACTTTTTGGTTCAT+TGG | - | chr1.2:66828824-66828843 | MS.gene20689:intron | 30.0% |
| AAACCCAATTCAGCTCAAAA+AGG | + | chr1.2:66827243-66827262 | None:intergenic | 35.0% | |
| AAATAGAGCCAACTCTTGAA+AGG | + | chr1.2:66829160-66829179 | None:intergenic | 35.0% | |
| AAGGGATTTGACGTGAAATT+CGG | - | chr1.2:66826813-66826832 | MS.gene20689:CDS | 35.0% | |
| AATCTGTCTCCATAAATTGG+AGG | + | chr1.2:66828899-66828918 | None:intergenic | 35.0% | |
| ACTCTATTTGAATGAGGTGT+GGG | + | chr1.2:66827540-66827559 | None:intergenic | 35.0% | |
| AGTATGATCATGGATAGGAA+GGG | - | chr1.2:66826795-66826814 | MS.gene20689:CDS | 35.0% | |
| ATCTGTCTCCATAAATTGGA+GGG | + | chr1.2:66828898-66828917 | None:intergenic | 35.0% | |
| ATTCTGCAGTTTGGAAAAGT+CGG | - | chr1.2:66829590-66829609 | MS.gene20689:CDS | 35.0% | |
| ATTTGGATGATGTGTCAAGA+AGG | - | chr1.2:66828717-66828736 | MS.gene20689:intron | 35.0% | |
| CATACCTGCTCAACAAATAT+GGG | - | chr1.2:66827823-66827842 | MS.gene20689:CDS | 35.0% | |
| CCTAACCATTTCAGTTCAAA+AGG | - | chr1.2:66828011-66828030 | MS.gene20689:intron | 35.0% | |
| GAAAATGTCATTCTGCAGTT+TGG | - | chr1.2:66829581-66829600 | MS.gene20689:CDS | 35.0% | |
| GAGAAATGATATAGTCAGTG+TGG | + | chr1.2:66828694-66828713 | None:intergenic | 35.0% | |
| GAGAGAACAAGAATGATTGT+TGG | + | chr1.2:66827720-66827739 | None:intergenic | 35.0% | |
| GCAAATCTGTCTCCATAAAT+TGG | + | chr1.2:66828902-66828921 | None:intergenic | 35.0% | |
| GCATATTGCAAATGCTTCAA+AGG | + | chr1.2:66829657-66829676 | None:intergenic | 35.0% | |
| GGTAACAGATCAAACTTTCT+GGG | - | chr1.2:66828845-66828864 | MS.gene20689:intron | 35.0% | |
| GTTCTATATTCTGTGACACA+TGG | - | chr1.2:66828500-66828519 | MS.gene20689:intron | 35.0% | |
| TAACTCATTCTCTTTGAGTG+AGG | - | chr1.2:66827742-66827761 | MS.gene20689:CDS | 35.0% | |
| TCATACCTGCTCAACAAATA+TGG | - | chr1.2:66827822-66827841 | MS.gene20689:CDS | 35.0% | |
| TCCTAAAAATGGAGTTTCTG+AGG | - | chr1.2:66829550-66829569 | MS.gene20689:CDS | 35.0% | |
| TGCTTAAACTCATGCTACAT+TGG | + | chr1.2:66828244-66828263 | None:intergenic | 35.0% | |
| TGGTAACAGATCAAACTTTC+TGG | - | chr1.2:66828844-66828863 | MS.gene20689:intron | 35.0% | |
| TGTTAAAAAACAAGGCTCCT+AGG | - | chr1.2:66829441-66829460 | MS.gene20689:CDS | 35.0% | |
| TTGAGGTTTCAGATGATACT+TGG | - | chr1.2:66826976-66826995 | MS.gene20689:CDS | 35.0% | |
| ! | AAAACCCATATTTGTTGAGC+AGG | + | chr1.2:66827830-66827849 | None:intergenic | 35.0% |
| ! | CCTTTTGAACTGAAATGGTT+AGG | + | chr1.2:66828014-66828033 | None:intergenic | 35.0% |
| ! | CTTTTTCTCAGTTTGAACCA+AGG | - | chr1.2:66828433-66828452 | MS.gene20689:intron | 35.0% |
| ! | GTCATTTAGGAGTATGATCA+TGG | - | chr1.2:66826785-66826804 | MS.gene20689:CDS | 35.0% |
| ! | TAAAAATGGAGTTTCTGAGG+AGG | - | chr1.2:66829553-66829572 | MS.gene20689:CDS | 35.0% |
| ! | TCATACAAGTTGAGGTTACA+AGG | + | chr1.2:66828551-66828570 | None:intergenic | 35.0% |
| ! | TTAGGAGTATGATCATGGAT+AGG | - | chr1.2:66826790-66826809 | MS.gene20689:CDS | 35.0% |
| !! | ACATCCTTTTTGAGCTGAAT+TGG | - | chr1.2:66827236-66827255 | MS.gene20689:CDS | 35.0% |
| !! | CAATGCTTATTTCGAGTTAC+AGG | + | chr1.2:66828107-66828126 | None:intergenic | 35.0% |
| !! | CATCCTTTTTGAGCTGAATT+GGG | - | chr1.2:66827237-66827256 | MS.gene20689:CDS | 35.0% |
| !! | TCCTCAGAAACTCCATTTTT+AGG | + | chr1.2:66829554-66829573 | None:intergenic | 35.0% |
| !! | TTATTTCGAGTTACAGGCAA+TGG | + | chr1.2:66828101-66828120 | None:intergenic | 35.0% |
| AAAGTGATTTCAGACCCAGA+AGG | + | chr1.2:66828815-66828834 | None:intergenic | 40.0% | |
| AATGCTTCAAAGGCAGAGAT+TGG | + | chr1.2:66829647-66829666 | None:intergenic | 40.0% | |
| AGGGATTTGACGTGAAATTC+GGG | - | chr1.2:66826814-66826833 | MS.gene20689:CDS | 40.0% | |
| ATACCTCAACTTCCCAACAT+AGG | + | chr1.2:66828750-66828769 | None:intergenic | 40.0% | |
| ATATTCTGTGACACATGGGT+TGG | - | chr1.2:66828505-66828524 | MS.gene20689:intron | 40.0% | |
| ATCATATGAGACATGCACGA+TGG | + | chr1.2:66828990-66829009 | None:intergenic | 40.0% | |
| ATTCGATGCAACTCTTGCAT+TGG | + | chr1.2:66827869-66827888 | None:intergenic | 40.0% | |
| CACTCTATTTGAATGAGGTG+TGG | + | chr1.2:66827541-66827560 | None:intergenic | 40.0% | |
| CACTTGACGTATCTCTCTTT+AGG | - | chr1.2:66829043-66829062 | MS.gene20689:intron | 40.0% | |
| CTGGTTGCTTCTCCTAAAAA+TGG | - | chr1.2:66829539-66829558 | MS.gene20689:CDS | 40.0% | |
| GAAAGAGCAAGAATGTTTCC+TGG | + | chr1.2:66827620-66827639 | None:intergenic | 40.0% | |
| GAGAGAGCAAGAATGATTGT+TGG | - | chr1.2:66827568-66827587 | MS.gene20689:CDS | 40.0% | |
| GAGTATGATCATGGATAGGA+AGG | - | chr1.2:66826794-66826813 | MS.gene20689:CDS | 40.0% | |
| GAGTTGGAGAGAAATTGTGA+AGG | - | chr1.2:66827040-66827059 | MS.gene20689:CDS | 40.0% | |
| GATTGGATACTGGTAATCCA+TGG | + | chr1.2:66829630-66829649 | None:intergenic | 40.0% | |
| GGATGTGCTTATGAGAATTG+AGG | - | chr1.2:66826959-66826978 | MS.gene20689:CDS | 40.0% | |
| GTTAAGAATTCACCGCATCA+TGG | + | chr1.2:66827518-66827537 | None:intergenic | 40.0% | |
| GTTTGATGTCATTCTCACGT+TGG | - | chr1.2:66827378-66827397 | MS.gene20689:intron | 40.0% | |
| TAAAAAACAAGGCTCCTAGG+TGG | - | chr1.2:66829444-66829463 | MS.gene20689:CDS | 40.0% | |
| TAACTCTTGTTGAGTGAGGT+TGG | - | chr1.2:66827642-66827661 | MS.gene20689:intron | 40.0% | |
| TCACTAACTCTTGTTGAGTG+AGG | - | chr1.2:66827638-66827657 | MS.gene20689:intron | 40.0% | |
| TCATATGAGACATGCACGAT+GGG | + | chr1.2:66828989-66829008 | None:intergenic | 40.0% | |
| TGAAGAAATTGAGTCTGCGT+CGG | + | chr1.2:66829311-66829330 | None:intergenic | 40.0% | |
| TGAAGTTCAAACACCAGCAT+TGG | + | chr1.2:66829481-66829500 | None:intergenic | 40.0% | |
| TGCTGGTGTTTGAACTTCAA+TGG | - | chr1.2:66829482-66829501 | MS.gene20689:CDS | 40.0% | |
| TGTTATTGCCAATGGTGCTT+TGG | - | chr1.2:66826878-66826897 | MS.gene20689:CDS | 40.0% | |
| TGTTGAGCAGGTATGATTGA+GGG | + | chr1.2:66827818-66827837 | None:intergenic | 40.0% | |
| TTCCTTGTGAATAGTGGCAT+TGG | - | chr1.2:66828056-66828075 | MS.gene20689:CDS | 40.0% | |
| TTGTTATCTTGGTTGTTGCG+TGG | - | chr1.2:66827459-66827478 | MS.gene20689:intron | 40.0% | |
| TTGTTGAGCAGGTATGATTG+AGG | + | chr1.2:66827819-66827838 | None:intergenic | 40.0% | |
| TTTCAGACCCAGAAGGTAAT+AGG | + | chr1.2:66828808-66828827 | None:intergenic | 40.0% | |
| TTTGACGTGAAATTCGGGTA+TGG | - | chr1.2:66826819-66826838 | MS.gene20689:CDS | 40.0% | |
| ! | ACTAGCTTCCTTGTGAATAG+TGG | - | chr1.2:66828050-66828069 | MS.gene20689:CDS | 40.0% |
| ! | ACTGCAGAATGACATTTTCC+TGG | + | chr1.2:66829580-66829599 | None:intergenic | 40.0% |
| ! | AGCTCAGAGTAGTTTGTGAT+TGG | - | chr1.2:66827209-66827228 | MS.gene20689:CDS | 40.0% |
| ! | ATCAATCACCAAAGCACCAT+TGG | + | chr1.2:66826889-66826908 | None:intergenic | 40.0% |
| ! | CTGCAGAATGACATTTTCCT+GGG | + | chr1.2:66829579-66829598 | None:intergenic | 40.0% |
| ! | GGAGCTGGTGTTAAAAAACA+AGG | - | chr1.2:66829433-66829452 | MS.gene20689:CDS | 40.0% |
| ! | GTGCTTTGGTGATTGATGAT+GGG | - | chr1.2:66826892-66826911 | MS.gene20689:CDS | 40.0% |
| !! | ATCTGAATGTTTTGGGCTCT+AGG | - | chr1.2:66829008-66829027 | MS.gene20689:intron | 40.0% |
| !! | CTGGGTCTGAAATCACTTTT+TGG | - | chr1.2:66828816-66828835 | MS.gene20689:intron | 40.0% |
| !! | CTGTTACTTTGGTTGTTGTG+TGG | + | chr1.2:66827790-66827809 | None:intergenic | 40.0% |
| !! | GCAAGAATGATTGTTGGCTT+TGG | - | chr1.2:66827574-66827593 | MS.gene20689:CDS | 40.0% |
| !! | GTTATTTTCATCATGCAGCC+TGG | - | chr1.2:66828349-66828368 | MS.gene20689:intron | 40.0% |
| !! | TGAATAGTGGCATTGGTGTA+AGG | - | chr1.2:66828063-66828082 | MS.gene20689:CDS | 40.0% |
| !! | TTATCAAAGGTGCTGCTGAT+TGG | + | chr1.2:66829400-66829419 | None:intergenic | 40.0% |
| AAAATGTTAACAGGGGCCCT+AGG | - | chr1.2:66829225-66829244 | MS.gene20689:intron | 45.0% | |
| AAGAAATTGAGTCTGCGTCG+GGG | + | chr1.2:66829309-66829328 | None:intergenic | 45.0% | |
| ACATCCCTCAAAAGCTCATG+GGG | + | chr1.2:66826945-66826964 | None:intergenic | 45.0% | |
| ACCTTGGTTGTTCCATGATG+CGG | - | chr1.2:66827503-66827522 | MS.gene20689:CDS | 45.0% | |
| AGAAGGAGTAGCACCTATGT+TGG | - | chr1.2:66828734-66828753 | MS.gene20689:intron | 45.0% | |
| AGAGCCAACTCTTGAAAGGA+AGG | + | chr1.2:66829156-66829175 | None:intergenic | 45.0% | |
| ATCATGGAACAACCAAGGTG+TGG | + | chr1.2:66827502-66827521 | None:intergenic | 45.0% | |
| CAAAGGCAGAGATTGGATAC+TGG | + | chr1.2:66829640-66829659 | None:intergenic | 45.0% | |
| CACATCCCTCAAAAGCTCAT+GGG | + | chr1.2:66826946-66826965 | None:intergenic | 45.0% | |
| CACCAATGCCACTATTCACA+AGG | + | chr1.2:66828061-66828080 | None:intergenic | 45.0% | |
| CCAACTCTTGAAAGGAAGGT+AGG | + | chr1.2:66829152-66829171 | None:intergenic | 45.0% | |
| CCTACCTTCCTTTCAAGAGT+TGG | - | chr1.2:66829149-66829168 | MS.gene20689:intron | 45.0% | |
| CTGATTGGAGATTCTCTGAG+CGG | + | chr1.2:66829385-66829404 | None:intergenic | 45.0% | |
| CTTTGAGTGAGGTGTGAGTT+GGG | - | chr1.2:66827753-66827772 | MS.gene20689:CDS | 45.0% | |
| GAAGAAATTGAGTCTGCGTC+GGG | + | chr1.2:66829310-66829329 | None:intergenic | 45.0% | |
| GAAGGAGTAGCACCTATGTT+GGG | - | chr1.2:66828735-66828754 | MS.gene20689:intron | 45.0% | |
| GATCTGAAGAACGGGATAGA+TGG | + | chr1.2:66829353-66829372 | None:intergenic | 45.0% | |
| GATGCACACCCTCCAATTTA+TGG | - | chr1.2:66828887-66828906 | MS.gene20689:intron | 45.0% | |
| GCAGTTTGGAAAAGTCGGAA+AGG | - | chr1.2:66829595-66829614 | MS.gene20689:CDS | 45.0% | |
| GTAAAGAGAATATCGCGGTC+TGG | - | chr1.2:66829065-66829084 | MS.gene20689:intron | 45.0% | |
| GTTGAGCAGGTATGATTGAG+GGG | + | chr1.2:66827817-66827836 | None:intergenic | 45.0% | |
| TAGTTTCCTGCAGGAACTCT+TGG | + | chr1.2:66828965-66828984 | None:intergenic | 45.0% | |
| TCATGGAACAACCAAGGTGT+GGG | + | chr1.2:66827501-66827520 | None:intergenic | 45.0% | |
| TCTTTGAGTGAGGTGTGAGT+TGG | - | chr1.2:66827752-66827771 | MS.gene20689:CDS | 45.0% | |
| TGATTGGAGATTCTCTGAGC+GGG | + | chr1.2:66829384-66829403 | None:intergenic | 45.0% | |
| TTGTTGAGCAGGAATGGTTG+AGG | - | chr1.2:66827430-66827449 | MS.gene20689:intron | 45.0% | |
| TTTGCAGCCTCAACTGATGA+CGG | - | chr1.2:66828629-66828648 | MS.gene20689:intron | 45.0% | |
| ! | AAGTCAAAATGATGGGGAGC+TGG | - | chr1.2:66829418-66829437 | MS.gene20689:CDS | 45.0% |
| ! | ATGGGTTGAGTCAGAGTTGT+TGG | - | chr1.2:66826910-66826929 | MS.gene20689:CDS | 45.0% |
| ! | GGTGCTTTGGTGATTGATGA+TGG | - | chr1.2:66826891-66826910 | MS.gene20689:CDS | 45.0% |
| ! | TGGGTTGAGTCAGAGTTGTT+GGG | - | chr1.2:66826911-66826930 | MS.gene20689:CDS | 45.0% |
| !! | AACTTGCTGGACAATTGAGG+AGG | + | chr1.2:66827077-66827096 | None:intergenic | 45.0% |
| !! | GTCAACTTGCTGGACAATTG+AGG | + | chr1.2:66827080-66827099 | None:intergenic | 45.0% |
| !! | TCTTGGTGTCAAAGCTGCTA+AGG | + | chr1.2:66829679-66829698 | None:intergenic | 45.0% |
| !! | TGAGGAGTGGGTTGTTATCT+TGG | - | chr1.2:66827448-66827467 | MS.gene20689:intron | 45.0% |
| !! | TTGTTGAGTGAGGTTGGCTT+TGG | - | chr1.2:66827648-66827667 | MS.gene20689:intron | 45.0% |
| !! | TTTTAGGAGAAGCAACCAGC+TGG | + | chr1.2:66829538-66829557 | None:intergenic | 45.0% |
| ACCGCATCATGGAACAACCA+AGG | + | chr1.2:66827507-66827526 | None:intergenic | 50.0% | |
| ACGATGGGATAGTTTCCTGC+AGG | + | chr1.2:66828974-66828993 | None:intergenic | 50.0% | |
| AGCAGGAATGGTTGAGGAGT+GGG | - | chr1.2:66827436-66827455 | MS.gene20689:intron | 50.0% | |
| AGCAGGTATGATTGAGGGGT+GGG | + | chr1.2:66827813-66827832 | None:intergenic | 50.0% | |
| ATCTTGGTTGTTGCGTGGCT+CGG | - | chr1.2:66827464-66827483 | MS.gene20689:intron | 50.0% | |
| ATTCCCTGTCTCCTTGAAGC+AGG | - | chr1.2:66827100-66827119 | MS.gene20689:CDS | 50.0% | |
| CACTTGCTTGAGACTTAGCC+TGG | + | chr1.2:66828939-66828958 | None:intergenic | 50.0% | |
| CAGATGATACTTGGCCGACT+CGG | - | chr1.2:66826985-66827004 | MS.gene20689:CDS | 50.0% | |
| CGGAAAGGATGTGTTCACCA+TGG | - | chr1.2:66829610-66829629 | MS.gene20689:CDS | 50.0% | |
| CTACCTGCTTCAAGGAGACA+GGG | + | chr1.2:66827106-66827125 | None:intergenic | 50.0% | |
| GAACAACCAAGGTGTGGGTT+GGG | + | chr1.2:66827496-66827515 | None:intergenic | 50.0% | |
| GAACTTGCCGTCATCAGTTG+AGG | + | chr1.2:66828639-66828658 | None:intergenic | 50.0% | |
| GACAAGTGCTACCTGCTTCA+AGG | + | chr1.2:66827114-66827133 | None:intergenic | 50.0% | |
| GACAGGGAATGTCAACTTGC+TGG | + | chr1.2:66827090-66827109 | None:intergenic | 50.0% | |
| GCACATCCCTCAAAAGCTCA+TGG | + | chr1.2:66826947-66826966 | None:intergenic | 50.0% | |
| GCACCTATGTTGGGAAGTTG+AGG | - | chr1.2:66828744-66828763 | MS.gene20689:intron | 50.0% | |
| GCGACAACATTCTTCCGAGT+CGG | + | chr1.2:66827002-66827021 | None:intergenic | 50.0% | |
| GGCATGAACAACTCCAATGC+TGG | - | chr1.2:66829465-66829484 | MS.gene20689:CDS | 50.0% | |
| TCTCCAACTCCTGCAAACAC+CGG | + | chr1.2:66827030-66827049 | None:intergenic | 50.0% | |
| TGAATTCCCAACCCACACCT+TGG | - | chr1.2:66827487-66827506 | MS.gene20689:CDS | 50.0% | |
| TGGAGTTGTTCATGCCACCT+AGG | + | chr1.2:66829461-66829480 | None:intergenic | 50.0% | |
| TTGCTTGAGACTTAGCCTGG+TGG | + | chr1.2:66828936-66828955 | None:intergenic | 50.0% | |
| ! | ACATGCCCCATGAGCTTTTG+AGG | - | chr1.2:66826937-66826956 | MS.gene20689:CDS | 50.0% |
| ! | CATGCCCCATGAGCTTTTGA+GGG | - | chr1.2:66826938-66826957 | MS.gene20689:CDS | 50.0% |
| !! | TGTGACACATGGGTTGGACT+GGG | - | chr1.2:66828511-66828530 | MS.gene20689:intron | 50.0% |
| AAGAATGTTGTCGCGTGCGC+CGG | - | chr1.2:66827008-66827027 | MS.gene20689:CDS | 55.0% | |
| ACCTCCAGGTTCAACAGCTG+AGG | + | chr1.2:66829282-66829301 | None:intergenic | 55.0% | |
| AGCTGTTGAACCTGGAGGTG+TGG | - | chr1.2:66829283-66829302 | MS.gene20689:intron | 55.0% | |
| ATCATGCAGCCTGGTCCAAG+GGG | - | chr1.2:66828358-66828377 | MS.gene20689:intron | 55.0% | |
| ATCTCTGGCAGCACTCACCT+TGG | + | chr1.2:66828453-66828472 | None:intergenic | 55.0% | |
| CACTGAATGAGAGAGCCCCT+TGG | + | chr1.2:66828376-66828395 | None:intergenic | 55.0% | |
| CAGGTTCAACAGCTGAGGCA+GGG | + | chr1.2:66829277-66829296 | None:intergenic | 55.0% | |
| CATCATGCAGCCTGGTCCAA+GGG | - | chr1.2:66828357-66828376 | MS.gene20689:intron | 55.0% | |
| GACACTTGCGTGCAGCAAGA+AGG | + | chr1.2:66828661-66828680 | None:intergenic | 55.0% | |
| GAGCAGGAATGGTTGAGGAG+TGG | - | chr1.2:66827435-66827454 | MS.gene20689:intron | 55.0% | |
| GAGCAGGTATGATTGAGGGG+TGG | + | chr1.2:66827814-66827833 | None:intergenic | 55.0% | |
| GCTACCTGCTTCAAGGAGAC+AGG | + | chr1.2:66827107-66827126 | None:intergenic | 55.0% | |
| GGAACAACCAAGGTGTGGGT+TGG | + | chr1.2:66827497-66827516 | None:intergenic | 55.0% | |
| GTGTCTCCAAGAGTTCCTGC+AGG | - | chr1.2:66828956-66828975 | MS.gene20689:intron | 55.0% | |
| TCATCATGCAGCCTGGTCCA+AGG | - | chr1.2:66828356-66828375 | MS.gene20689:intron | 55.0% | |
| TTCAACAGCTGAGGCAGGGA+TGG | + | chr1.2:66829273-66829292 | None:intergenic | 55.0% | |
| ! | TGAGACTTAGCCTGGTGGTG+CGG | + | chr1.2:66828931-66828950 | None:intergenic | 55.0% |
| !! | CTGTGACACATGGGTTGGAC+TGG | - | chr1.2:66828510-66828529 | MS.gene20689:intron | 55.0% |
| !! | TGAGGGGTGGGCTGTTACTT+TGG | + | chr1.2:66827801-66827820 | None:intergenic | 55.0% |
| ATGAGAGAGCCCCTTGGACC+AGG | + | chr1.2:66828370-66828389 | None:intergenic | 60.0% | |
| CCAGGTTCAACAGCTGAGGC+AGG | + | chr1.2:66829278-66829297 | None:intergenic | 60.0% | |
| CCTGCCTCAGCTGTTGAACC+TGG | - | chr1.2:66829275-66829294 | MS.gene20689:intron | 60.0% | |
| GCCTCAGCTGTTGAACCTGG+AGG | - | chr1.2:66829278-66829297 | MS.gene20689:intron | 60.0% | |
| TTGCAAAGTCCCGCACCACC+AGG | - | chr1.2:66828918-66828937 | MS.gene20689:intron | 60.0% | |
| ! | GAGACTTAGCCTGGTGGTGC+GGG | + | chr1.2:66828930-66828949 | None:intergenic | 60.0% |
| ! | TGGAGTTTCTGAGGAGGCCC+AGG | - | chr1.2:66829559-66829578 | MS.gene20689:CDS | 60.0% |
| ! | GCGCCGGTGTTTGCAGGAGT+TGG | - | chr1.2:66827024-66827043 | MS.gene20689:CDS | 65.0% |
| ! | TCGCGTGCGCCGGTGTTTGC+AGG | - | chr1.2:66827018-66827037 | MS.gene20689:CDS | 70.0% |
| TGCGTCGGGGCCACACCTCC+AGG | + | chr1.2:66829296-66829315 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 66826783 | 66829712 | 66826783 | ID=MS.gene20689 |
| chr1.2 | mRNA | 66826783 | 66829712 | 66826783 | ID=MS.gene20689.t1;Parent=MS.gene20689 |
| chr1.2 | exon | 66829374 | 66829712 | 66829374 | ID=MS.gene20689.t1.exon1;Parent=MS.gene20689.t1 |
| chr1.2 | CDS | 66829374 | 66829712 | 66829374 | ID=cds.MS.gene20689.t1;Parent=MS.gene20689.t1 |
| chr1.2 | exon | 66828041 | 66828128 | 66828041 | ID=MS.gene20689.t1.exon2;Parent=MS.gene20689.t1 |
| chr1.2 | CDS | 66828041 | 66828128 | 66828041 | ID=cds.MS.gene20689.t1;Parent=MS.gene20689.t1 |
| chr1.2 | exon | 66827730 | 66827859 | 66827730 | ID=MS.gene20689.t1.exon3;Parent=MS.gene20689.t1 |
| chr1.2 | CDS | 66827730 | 66827859 | 66827730 | ID=cds.MS.gene20689.t1;Parent=MS.gene20689.t1 |
| chr1.2 | exon | 66827466 | 66827642 | 66827466 | ID=MS.gene20689.t1.exon4;Parent=MS.gene20689.t1 |
| chr1.2 | CDS | 66827466 | 66827642 | 66827466 | ID=cds.MS.gene20689.t1;Parent=MS.gene20689.t1 |
| chr1.2 | exon | 66826783 | 66827257 | 66826783 | ID=MS.gene20689.t1.exon5;Parent=MS.gene20689.t1 |
| chr1.2 | CDS | 66826783 | 66827257 | 66826783 | ID=cds.MS.gene20689.t1;Parent=MS.gene20689.t1 |
| Gene Sequence |
| Protein sequence |
