Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03015.t1 | XP_013469223.1 | 99 | 401 | 4 | 0 | 1 | 401 | 1 | 401 | 3.40E-232 | 813.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03015.t1 | Q8VY21 | 72.1 | 412 | 97 | 5 | 1 | 401 | 1 | 405 | 4.5e-169 | 595.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03015.t1 | A0A072VNQ0 | 99.0 | 401 | 4 | 0 | 1 | 401 | 1 | 401 | 2.4e-232 | 813.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene03015.t1 | TF | TUB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene065862 | MS.gene03015 | PPI |
| MS.gene03015 | MS.gene63735 | PPI |
| MS.gene03015 | MS.gene28762 | PPI |
| MS.gene03015 | MS.gene065857 | PPI |
| MS.gene03015 | MS.gene043867 | PPI |
| MS.gene028393 | MS.gene03015 | PPI |
| MS.gene03015 | MS.gene060581 | PPI |
| MS.gene83322 | MS.gene03015 | PPI |
| MS.gene92231 | MS.gene03015 | PPI |
| MS.gene03015 | MS.gene026860 | PPI |
| MS.gene03015 | MS.gene060774 | PPI |
| MS.gene03015 | MS.gene060202 | PPI |
| MS.gene046119 | MS.gene03015 | PPI |
| MS.gene03015 | MS.gene97334 | PPI |
| MS.gene03015 | MS.gene63734 | PPI |
| MS.gene03015 | MS.gene90813 | PPI |
| MS.gene03015 | MS.gene48652 | PPI |
| MS.gene03015 | MS.gene029082 | PPI |
| MS.gene03015 | MS.gene065853 | PPI |
| MS.gene03015 | MS.gene35064 | PPI |
| MS.gene03015 | MS.gene065836 | PPI |
| MS.gene03015 | MS.gene060580 | PPI |
| MS.gene03015 | MS.gene060201 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03015.t1 | MTR_1g088960 | 99.002 | 401 | 4 | 0 | 1 | 401 | 1 | 401 | 0.0 | 832 |
| MS.gene03015.t1 | MTR_2g020280 | 68.668 | 383 | 117 | 3 | 21 | 401 | 11 | 392 | 0.0 | 556 |
| MS.gene03015.t1 | MTR_2g020280 | 69.625 | 293 | 87 | 2 | 111 | 401 | 1 | 293 | 9.74e-153 | 434 |
| MS.gene03015.t1 | MTR_2g007930 | 52.900 | 431 | 168 | 10 | 1 | 401 | 1 | 426 | 4.63e-152 | 437 |
| MS.gene03015.t1 | MTR_5g020580 | 52.370 | 422 | 173 | 7 | 1 | 401 | 1 | 415 | 4.58e-144 | 416 |
| MS.gene03015.t1 | MTR_1g098790 | 50.459 | 436 | 175 | 10 | 1 | 401 | 1 | 430 | 5.09e-142 | 412 |
| MS.gene03015.t1 | MTR_8g077195 | 51.551 | 419 | 177 | 6 | 1 | 401 | 1 | 411 | 4.62e-141 | 409 |
| MS.gene03015.t1 | MTR_1g022370 | 55.028 | 358 | 149 | 6 | 50 | 401 | 70 | 421 | 5.18e-132 | 386 |
| MS.gene03015.t1 | MTR_2g076200 | 50.140 | 357 | 145 | 5 | 50 | 401 | 42 | 370 | 3.80e-118 | 349 |
| MS.gene03015.t1 | MTR_2g076210 | 45.000 | 360 | 160 | 8 | 50 | 401 | 37 | 366 | 1.84e-94 | 288 |
| MS.gene03015.t1 | MTR_8g077675 | 41.487 | 417 | 200 | 17 | 1 | 395 | 1 | 395 | 2.22e-82 | 258 |
| MS.gene03015.t1 | MTR_8g077620 | 38.614 | 404 | 217 | 10 | 1 | 393 | 1 | 384 | 1.36e-80 | 253 |
| MS.gene03015.t1 | MTR_8g077650 | 39.617 | 313 | 144 | 9 | 99 | 394 | 44 | 328 | 1.04e-61 | 202 |
| MS.gene03015.t1 | MTR_8g077640 | 35.589 | 399 | 189 | 12 | 1 | 392 | 46 | 383 | 3.73e-56 | 190 |
| MS.gene03015.t1 | MTR_1g023800 | 39.375 | 160 | 91 | 3 | 1 | 156 | 1 | 158 | 7.56e-30 | 113 |
| MS.gene03015.t1 | MTR_0210s0010 | 38.776 | 98 | 54 | 1 | 92 | 189 | 8 | 99 | 7.78e-14 | 67.8 |
| MS.gene03015.t1 | MTR_2g105390 | 49.206 | 63 | 25 | 1 | 340 | 402 | 305 | 360 | 2.19e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03015.t1 | AT2G47900 | 72.087 | 412 | 97 | 6 | 1 | 401 | 1 | 405 | 0.0 | 587 |
| MS.gene03015.t1 | AT2G47900 | 72.087 | 412 | 97 | 6 | 1 | 401 | 1 | 405 | 0.0 | 587 |
| MS.gene03015.t1 | AT2G47900 | 71.913 | 413 | 97 | 6 | 1 | 401 | 1 | 406 | 0.0 | 586 |
| MS.gene03015.t1 | AT3G06380 | 55.941 | 404 | 150 | 9 | 1 | 401 | 1 | 379 | 1.16e-146 | 422 |
| MS.gene03015.t1 | AT5G18680 | 58.356 | 365 | 124 | 8 | 50 | 401 | 39 | 388 | 3.50e-146 | 421 |
| MS.gene03015.t1 | AT1G43640 | 48.858 | 438 | 177 | 11 | 1 | 401 | 1 | 428 | 1.08e-139 | 406 |
| MS.gene03015.t1 | AT1G76900 | 47.265 | 457 | 182 | 9 | 1 | 401 | 1 | 454 | 3.21e-137 | 400 |
| MS.gene03015.t1 | AT1G76900 | 47.265 | 457 | 182 | 9 | 1 | 401 | 1 | 454 | 3.21e-137 | 400 |
| MS.gene03015.t1 | AT1G76900 | 47.265 | 457 | 182 | 9 | 1 | 401 | 1 | 454 | 3.21e-137 | 400 |
| MS.gene03015.t1 | AT1G25280 | 48.322 | 447 | 182 | 7 | 1 | 401 | 1 | 444 | 1.68e-135 | 396 |
| MS.gene03015.t1 | AT2G18280 | 51.117 | 403 | 184 | 6 | 1 | 401 | 1 | 392 | 6.14e-134 | 390 |
| MS.gene03015.t1 | AT2G18280 | 51.117 | 403 | 184 | 6 | 1 | 401 | 1 | 392 | 6.14e-134 | 390 |
| MS.gene03015.t1 | AT1G47270 | 52.989 | 368 | 149 | 5 | 42 | 401 | 36 | 387 | 2.79e-132 | 385 |
| MS.gene03015.t1 | AT1G47270 | 52.989 | 368 | 149 | 5 | 42 | 401 | 61 | 412 | 6.79e-132 | 385 |
| MS.gene03015.t1 | AT1G47270 | 52.989 | 368 | 149 | 5 | 42 | 401 | 60 | 411 | 7.24e-132 | 385 |
| MS.gene03015.t1 | AT1G43640 | 51.226 | 367 | 147 | 7 | 62 | 401 | 1 | 362 | 7.07e-129 | 376 |
| MS.gene03015.t1 | AT5G18680 | 58.361 | 305 | 100 | 7 | 109 | 401 | 7 | 296 | 5.26e-115 | 338 |
| MS.gene03015.t1 | AT3G06380 | 59.450 | 291 | 108 | 5 | 113 | 401 | 5 | 287 | 2.78e-112 | 331 |
| MS.gene03015.t1 | AT1G53320 | 48.895 | 362 | 152 | 6 | 48 | 401 | 42 | 378 | 2.87e-112 | 334 |
| MS.gene03015.t1 | AT1G25280 | 50.558 | 269 | 94 | 5 | 169 | 401 | 1 | 266 | 5.15e-82 | 253 |
| MS.gene03015.t1 | AT1G25280 | 50.558 | 269 | 94 | 5 | 169 | 401 | 1 | 266 | 5.15e-82 | 253 |
| MS.gene03015.t1 | AT1G61940 | 70.930 | 86 | 25 | 0 | 53 | 138 | 1 | 86 | 4.80e-40 | 144 |
| MS.gene03015.t1 | AT1G61940 | 72.131 | 61 | 17 | 0 | 53 | 113 | 1 | 61 | 1.48e-24 | 101 |
| MS.gene03015.t1 | AT1G61940 | 48.000 | 100 | 28 | 5 | 248 | 346 | 102 | 178 | 1.16e-12 | 67.8 |
Find 111 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATATCATTTCTCTAAATT+TGG | 0.095614 | 1.3:-62488400 | MS.gene03015:CDS |
| TTGTAACAGATCAAACTTTC+TGG | 0.178818 | 1.3:-62488256 | MS.gene03015:intron |
| GATGCACACCCTCCAATTTA+TGG | 0.187148 | 1.3:-62488213 | MS.gene03015:CDS |
| GCAAATCTGTCTCCATAAAT+TGG | 0.193737 | 1.3:+62488201 | None:intergenic |
| CTCATATGATCTGAATGTTT+TGG | 0.268134 | 1.3:-62488100 | MS.gene03015:CDS |
| TTAGGTTAACGATGTCATTT+AGG | 0.284142 | 1.3:-62490330 | None:intergenic |
| TCGCGTGCGCCGGTGTTTGC+AGG | 0.297366 | 1.3:-62490084 | MS.gene03015:CDS |
| AAGGGATTTGACGTGAAATT+CGG | 0.342997 | 1.3:-62490289 | MS.gene03015:CDS |
| GAAAATGTCATTCTGCAGTT+TGG | 0.348950 | 1.3:-62487520 | MS.gene03015:CDS |
| TGCATCATACACTGTAAATT+TGG | 0.359668 | 1.3:+62488230 | None:intergenic |
| CAATCACTCACAAGCAATCT+TGG | 0.389643 | 1.3:+62487408 | None:intergenic |
| ATTGGCCCTCACAGTATTGC+AGG | 0.390301 | 1.3:-62487238 | MS.gene03015:CDS |
| TAGGATTATGCAATGTGTTA+TGG | 0.402541 | 1.3:-62487857 | MS.gene03015:CDS |
| TGTAACAGATCAAACTTTCT+GGG | 0.411602 | 1.3:-62488255 | MS.gene03015:intron |
| CCTGCCTCAGCTGTTGAACC+TGG | 0.411820 | 1.3:-62487826 | MS.gene03015:CDS |
| GACAGGGAATGTCAACTTGC+TGG | 0.412110 | 1.3:+62490015 | None:intergenic |
| AGGGATTTGACGTGAAATTC+GGG | 0.417694 | 1.3:-62490288 | MS.gene03015:CDS |
| ATGGGTTGAGTCAGAGTTGT+TGG | 0.417839 | 1.3:-62490192 | MS.gene03015:CDS |
| GATCTGAAGAACGGGATAGA+TGG | 0.420581 | 1.3:+62487751 | None:intergenic |
| GACAAGTGCTACCTGCTTCA+AGG | 0.422783 | 1.3:+62489991 | None:intergenic |
| TAGTTTCCTGCAGGAACTCT+TGG | 0.422898 | 1.3:+62488138 | None:intergenic |
| TGCGTCGGGGCCACACCTCC+AGG | 0.436166 | 1.3:+62487808 | None:intergenic |
| TTATCAAAGGTGCTGCTGAT+TGG | 0.436264 | 1.3:+62487704 | None:intergenic |
| GCGCCGGTGTTTGCAGGAGT+TGG | 0.436346 | 1.3:-62490078 | MS.gene03015:CDS |
| TGTTATTGCCAATGGTGCTT+TGG | 0.443517 | 1.3:-62490224 | MS.gene03015:CDS |
| GAAGAAATTGAGTCTGCGTC+GGG | 0.444561 | 1.3:+62487794 | None:intergenic |
| TTGAGGTTTCAGATGATACT+TGG | 0.450054 | 1.3:-62490126 | MS.gene03015:CDS |
| ATAACACATTGCATAATCCT+AGG | 0.454350 | 1.3:+62487859 | None:intergenic |
| GGTGCTTTGGTGATTGATGA+TGG | 0.458578 | 1.3:-62490211 | MS.gene03015:CDS |
| AATGCTTCAAAGGCAGAGAT+TGG | 0.458777 | 1.3:+62487457 | None:intergenic |
| TGCTGGTGTTTGAACTTCAA+TGG | 0.466360 | 1.3:-62487619 | MS.gene03015:CDS |
| GCTACCTGCTTCAAGGAGAC+AGG | 0.468323 | 1.3:+62489998 | None:intergenic |
| GAGACTTAGCCTGGTGGTGC+GGG | 0.471988 | 1.3:+62488173 | None:intergenic |
| CCAGGTTCAACAGCTGAGGC+AGG | 0.472095 | 1.3:+62487826 | None:intergenic |
| CATCATGCAGCCTGGTCCAA+GGG | 0.476151 | 1.3:-62488743 | MS.gene03015:intron |
| GAAGGAGTAGCACCTATGTT+GGG | 0.479960 | 1.3:-62488365 | MS.gene03015:CDS |
| GAGTATGATCATGGATAGGA+AGG | 0.482584 | 1.3:-62490308 | MS.gene03015:CDS |
| TGAAGTTCAAACACCAGCAT+TGG | 0.484021 | 1.3:+62487623 | None:intergenic |
| CAAAGGCAGAGATTGGATAC+TGG | 0.485873 | 1.3:+62487464 | None:intergenic |
| ATCAATCACCAAAGCACCAT+TGG | 0.486769 | 1.3:+62490216 | None:intergenic |
| GTCATTTAGGAGTATGATCA+TGG | 0.487718 | 1.3:-62490317 | MS.gene03015:CDS |
| CACTTGCTTGAGACTTAGCC+TGG | 0.491047 | 1.3:+62488164 | None:intergenic |
| TGGAGTTTCTGAGGAGGCCC+AGG | 0.493680 | 1.3:-62487542 | MS.gene03015:CDS |
| AAGAATGTTGTCGCGTGCGC+CGG | 0.493919 | 1.3:-62490094 | MS.gene03015:CDS |
| AGCTGTTGAACCTGGAGGTG+TGG | 0.496026 | 1.3:-62487818 | MS.gene03015:CDS |
| ATAAGAGAGCCCCTTGGACC+AGG | 0.512782 | 1.3:+62488733 | None:intergenic |
| GTGCTTTGGTGATTGATGAT+GGG | 0.516000 | 1.3:-62490210 | MS.gene03015:CDS |
| AGAAGGAGTAGCACCTATGT+TGG | 0.521149 | 1.3:-62488366 | MS.gene03015:CDS |
| TCATCATGCAGCCTGGTCCA+AGG | 0.523744 | 1.3:-62488744 | MS.gene03015:intron |
| CTTTGATAAGTCAAAATGAT+GGG | 0.523813 | 1.3:-62487690 | MS.gene03015:CDS |
| GCACATCCCTCAAAAGCTCA+TGG | 0.537457 | 1.3:+62490158 | None:intergenic |
| TTGCAAAGTCCCGCACCACC+AGG | 0.537675 | 1.3:-62488182 | MS.gene03015:CDS |
| TTCAACAGCTGAGGCAGGGA+TGG | 0.540786 | 1.3:+62487831 | None:intergenic |
| CTGTGAGGGCCAATTCCACC+TGG | 0.544338 | 1.3:+62487247 | None:intergenic |
| ATTCCCTGTCTCCTTGAAGC+AGG | 0.548762 | 1.3:-62490002 | MS.gene03015:intron |
| CAGATGATACTTGGCCGACT+CGG | 0.549792 | 1.3:-62490117 | MS.gene03015:CDS |
| CACATCCCTCAAAAGCTCAT+GGG | 0.551644 | 1.3:+62490159 | None:intergenic |
| GCATATTGCAAATGCTTCAA+AGG | 0.553851 | 1.3:+62487447 | None:intergenic |
| CCTTTGATAAGTCAAAATGA+TGG | 0.555873 | 1.3:-62487691 | MS.gene03015:CDS |
| AAAATGTTAACAGGGGCCCT+AGG | 0.556228 | 1.3:-62487876 | MS.gene03015:intron |
| TGGGTTGAGTCAGAGTTGTT+GGG | 0.556484 | 1.3:-62490191 | MS.gene03015:CDS |
| GGATGTGCTTATGAGAATTG+AGG | 0.557422 | 1.3:-62490143 | MS.gene03015:CDS |
| ATACCTCAACTTCCCAACAT+AGG | 0.558903 | 1.3:+62488353 | None:intergenic |
| GTCAACTTGCTGGACAATTG+AGG | 0.559973 | 1.3:+62490025 | None:intergenic |
| TCTTGGTGTCAAAGCTGCTA+AGG | 0.561466 | 1.3:+62487425 | None:intergenic |
| GAGAAATGATATAGTCAGTG+TGG | 0.564360 | 1.3:+62488409 | None:intergenic |
| AATCTGTCTCCATAAATTGG+AGG | 0.567458 | 1.3:+62488204 | None:intergenic |
| CACTGAATAAGAGAGCCCCT+TGG | 0.567563 | 1.3:+62488727 | None:intergenic |
| TTTGACGTGAAATTCGGGTA+TGG | 0.568681 | 1.3:-62490283 | MS.gene03015:CDS |
| TGATTGGAGATTCTCTGAGC+GGG | 0.569183 | 1.3:+62487720 | None:intergenic |
| GCACCTATGTTGGGAAGTTG+AGG | 0.569372 | 1.3:-62488356 | MS.gene03015:intron |
| TGAAGAAATTGAGTCTGCGT+CGG | 0.573052 | 1.3:+62487793 | None:intergenic |
| ATTCTGCAGTTTGGAAAAGT+CGG | 0.574704 | 1.3:-62487511 | MS.gene03015:CDS |
| TCATATGAGACATGCACGAT+GGG | 0.577709 | 1.3:+62488114 | None:intergenic |
| AAGTCAAAATGATGGGGAGC+TGG | 0.581065 | 1.3:-62487683 | MS.gene03015:CDS |
| TGGAGTTGTTCATGCCACCT+AGG | 0.583552 | 1.3:+62487643 | None:intergenic |
| TTTGCAGCCTCAACTGATGA+CGG | 0.583581 | 1.3:-62488471 | MS.gene03015:intron |
| GGCATGAACAACTCCAATGC+TGG | 0.585250 | 1.3:-62487636 | MS.gene03015:CDS |
| TGAGACTTAGCCTGGTGGTG+CGG | 0.585690 | 1.3:+62488172 | None:intergenic |
| ACGATGGGATAGTTTCCTGC+AGG | 0.585969 | 1.3:+62488129 | None:intergenic |
| GATGTTAATGTTATTGCCAA+TGG | 0.594465 | 1.3:-62490232 | MS.gene03015:CDS |
| ATCTGTCTCCATAAATTGGA+GGG | 0.597162 | 1.3:+62488205 | None:intergenic |
| CTACCTGCTTCAAGGAGACA+GGG | 0.598753 | 1.3:+62489999 | None:intergenic |
| GTGTCTCCAAGAGTTCCTGC+AGG | 0.601279 | 1.3:-62488144 | MS.gene03015:CDS |
| GACACTTGCGTGCAGCAAGA+AGG | 0.601304 | 1.3:+62488442 | None:intergenic |
| CAGGTTCAACAGCTGAGGCA+GGG | 0.604724 | 1.3:+62487827 | None:intergenic |
| GAACTTGCCGTCATCAGTTG+AGG | 0.606120 | 1.3:+62488464 | None:intergenic |
| GATTGGATACTGGTAATCCA+TGG | 0.610280 | 1.3:+62487474 | None:intergenic |
| AGAAATGATATAGTCAGTGT+GGG | 0.610923 | 1.3:+62488410 | None:intergenic |
| GCCTCAGCTGTTGAACCTGG+AGG | 0.611858 | 1.3:-62487823 | MS.gene03015:CDS |
| TTAGGAGTATGATCATGGAT+AGG | 0.615050 | 1.3:-62490312 | MS.gene03015:CDS |
| AACTTGCTGGACAATTGAGG+AGG | 0.616449 | 1.3:+62490028 | None:intergenic |
| TCAGACCTGCAATACTGTGA+GGG | 0.617106 | 1.3:+62487233 | None:intergenic |
| TAACACATTGCATAATCCTA+GGG | 0.617287 | 1.3:+62487860 | None:intergenic |
| ATCATGCAGCCTGGTCCAAG+GGG | 0.619178 | 1.3:-62488742 | MS.gene03015:intron |
| ACCTCCAGGTTCAACAGCTG+AGG | 0.623409 | 1.3:+62487822 | None:intergenic |
| CTGATTGGAGATTCTCTGAG+CGG | 0.624740 | 1.3:+62487719 | None:intergenic |
| ATCATATGAGACATGCACGA+TGG | 0.626290 | 1.3:+62488113 | None:intergenic |
| ACATCCCTCAAAAGCTCATG+GGG | 0.631071 | 1.3:+62490160 | None:intergenic |
| AGTATGATCATGGATAGGAA+GGG | 0.631347 | 1.3:-62490307 | MS.gene03015:CDS |
| GCAGTTTGGAAAAGTCGGAA+AGG | 0.632984 | 1.3:-62487506 | MS.gene03015:CDS |
| ATTTGGATGATGTATCAAGA+AGG | 0.634683 | 1.3:-62488383 | MS.gene03015:CDS |
| CGGAAAGGATGTGTTCACCA+TGG | 0.642135 | 1.3:-62487491 | MS.gene03015:CDS |
| TGCTATATTAAACGAAATCG+CGG | 0.643232 | 1.3:-62488706 | MS.gene03015:CDS |
| GCGACAACATTCTTCCGAGT+CGG | 0.645949 | 1.3:+62490103 | None:intergenic |
| TTTGATAAGTCAAAATGATG+GGG | 0.648482 | 1.3:-62487689 | MS.gene03015:CDS |
| GAGTTGGAGAGAAATTGTGA+AGG | 0.664353 | 1.3:-62490062 | MS.gene03015:CDS |
| TCTCCAACTCCTGCAAACAC+CGG | 0.665494 | 1.3:+62490075 | None:intergenic |
| ATCAGACCTGCAATACTGTG+AGG | 0.677842 | 1.3:+62487232 | None:intergenic |
| AAGAAATTGAGTCTGCGTCG+GGG | 0.697436 | 1.3:+62487795 | None:intergenic |
| TTGCTTGAGACTTAGCCTGG+TGG | 0.709949 | 1.3:+62488167 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAAAAGATACATC+GGG | + | chr1.3:62487592-62487611 | None:intergenic | 15.0% |
| !! | GAAAAAAATAAAAGATACAT+CGG | + | chr1.3:62487593-62487612 | None:intergenic | 15.0% |
| !! | TGAGAAAAAGATAATAAATT+TGG | + | chr1.3:62488875-62488894 | None:intergenic | 15.0% |
| !! | AAATCAAATCAACATTACAA+AGG | + | chr1.3:62489063-62489082 | None:intergenic | 20.0% |
| !! | AATTGTTCGTTTACAAAAAT+AGG | + | chr1.3:62488124-62488143 | None:intergenic | 20.0% |
| !! | ACATCTTAAATTTAAATCTC+TGG | + | chr1.3:62488920-62488939 | None:intergenic | 20.0% |
| !! | CTATATCATTTCTCTAAATT+TGG | - | chr1.3:62489152-62489171 | MS.gene03015:intron | 20.0% |
| !! | TAAATAAGAATTCAATAGCA+GGG | + | chr1.3:62489634-62489653 | None:intergenic | 20.0% |
| !! | TAGTTAACAAAATGTTAACA+GGG | - | chr1.3:62489668-62489687 | MS.gene03015:intron | 20.0% |
| !! | TTAGTTAACAAAATGTTAAC+AGG | - | chr1.3:62489667-62489686 | MS.gene03015:intron | 20.0% |
| !!! | AGATTTAAATTTAAGATGTG+TGG | - | chr1.3:62488921-62488940 | MS.gene03015:intron | 20.0% |
| ! | ACTAAGAAACAATCGATAAT+AGG | + | chr1.3:62489578-62489597 | None:intergenic | 25.0% |
| ! | AGTTAACAAAATGTTAACAG+GGG | - | chr1.3:62489669-62489688 | MS.gene03015:intron | 25.0% |
| ! | ATACTTTACTAACTTGAGAA+AGG | - | chr1.3:62487768-62487787 | MS.gene03015:CDS | 25.0% |
| ! | CTAAATAAGAATTCAATAGC+AGG | + | chr1.3:62489635-62489654 | None:intergenic | 25.0% |
| ! | CTAAGAAACAATCGATAATA+GGG | + | chr1.3:62489577-62489596 | None:intergenic | 25.0% |
| ! | CTTTGATAAGTCAAAATGAT+GGG | - | chr1.3:62489862-62489881 | MS.gene03015:intron | 25.0% |
| ! | TCTTAATATCATACAAGTTG+AGG | + | chr1.3:62489011-62489030 | None:intergenic | 25.0% |
| ! | TTTGATAAGTCAAAATGATG+GGG | - | chr1.3:62489863-62489882 | MS.gene03015:intron | 25.0% |
| !! | TCATATGATCTGAATGTTTT+GGG | - | chr1.3:62489453-62489472 | MS.gene03015:intron | 25.0% |
| !! | TTCTCAACTTTTGTTCAATT+GGG | - | chr1.3:62488660-62488679 | MS.gene03015:intron | 25.0% |
| !! | TTTCTCAACTTTTGTTCAAT+TGG | - | chr1.3:62488659-62488678 | MS.gene03015:intron | 25.0% |
| !!! | GTTTTATTCTTATCACACAA+AGG | - | chr1.3:62488729-62488748 | MS.gene03015:CDS | 25.0% |
| !!! | TTTTTTCTACTAAGATGCAA+AGG | - | chr1.3:62488592-62488611 | MS.gene03015:intron | 25.0% |
| AGAAATGATATAGTCAGTGT+GGG | + | chr1.3:62489145-62489164 | None:intergenic | 30.0% | |
| ATAACACATTGCATAATCCT+AGG | + | chr1.3:62489696-62489715 | None:intergenic | 30.0% | |
| ATTATTACCTATTGCCTTCT+GGG | - | chr1.3:62489250-62489269 | MS.gene03015:intron | 30.0% | |
| ATTCCTGCTCAACAAATATT+TGG | + | chr1.3:62487875-62487894 | None:intergenic | 30.0% | |
| ATTTGGATGATGTATCAAGA+AGG | - | chr1.3:62489169-62489188 | MS.gene03015:intron | 30.0% | |
| CCTTTGATAAGTCAAAATGA+TGG | - | chr1.3:62489861-62489880 | MS.gene03015:intron | 30.0% | |
| GAAAGAACAAGAATGATTGT+TGG | + | chr1.3:62488170-62488189 | None:intergenic | 30.0% | |
| GATGTTAATGTTATTGCCAA+TGG | - | chr1.3:62487320-62487339 | MS.gene03015:intron | 30.0% | |
| TAACACATTGCATAATCCTA+GGG | + | chr1.3:62489695-62489714 | None:intergenic | 30.0% | |
| TAACTCACTCTATTTGAATG+AGG | + | chr1.3:62487996-62488015 | None:intergenic | 30.0% | |
| TAATCAACAAGTCATGTCAT+AGG | + | chr1.3:62489234-62489253 | None:intergenic | 30.0% | |
| TAGGATTATGCAATGTGTTA+TGG | - | chr1.3:62489695-62489714 | MS.gene03015:intron | 30.0% | |
| TGCATCATACACTGTAAATT+TGG | + | chr1.3:62489325-62489344 | None:intergenic | 30.0% | |
| TGCTATATTAAACGAAATCG+CGG | - | chr1.3:62488846-62488865 | MS.gene03015:intron | 30.0% | |
| TGTAACAGATCAAACTTTCT+GGG | - | chr1.3:62489297-62489316 | MS.gene03015:intron | 30.0% | |
| TTCAGTTAAAAATTTCCAGC+TGG | - | chr1.3:62489971-62489990 | MS.gene03015:intron | 30.0% | |
| TTCTATATTCTGTGACACAT+GGG | - | chr1.3:62488953-62488972 | MS.gene03015:intron | 30.0% | |
| TTGTAACAGATCAAACTTTC+TGG | - | chr1.3:62489296-62489315 | MS.gene03015:intron | 30.0% | |
| ! | AAACCAAATATTTGTTGAGC+AGG | - | chr1.3:62487869-62487888 | MS.gene03015:intron | 30.0% |
| ! | AAATATTTGTTGAGCAGGAA+TGG | - | chr1.3:62487874-62487893 | MS.gene03015:intron | 30.0% |
| ! | CATTTTTGTAAATGAAAGCC+AGG | - | chr1.3:62488049-62488068 | MS.gene03015:intron | 30.0% |
| ! | CTCATATGATCTGAATGTTT+TGG | - | chr1.3:62489452-62489471 | MS.gene03015:intron | 30.0% |
| ! | TACATCCTTTTGAACTGAAA+TGG | + | chr1.3:62488471-62488490 | None:intergenic | 30.0% |
| !! | CAATGCTTATTTCAAGTTAC+AGG | + | chr1.3:62488559-62488578 | None:intergenic | 30.0% |
| !! | GTTGATTTTGATCTGAAGAA+CGG | + | chr1.3:62489813-62489832 | None:intergenic | 30.0% |
| !! | TTATTTCAAGTTACAGGCAA+TGG | + | chr1.3:62488553-62488572 | None:intergenic | 30.0% |
| !! | TTGATTTTGATCTGAAGAAC+GGG | + | chr1.3:62489812-62489831 | None:intergenic | 30.0% |
| !!! | ACATAGTTGCTGATTTTACT+TGG | - | chr1.3:62490272-62490291 | MS.gene03015:CDS | 30.0% |
| !!! | CCATCATTTTGACTTATCAA+AGG | + | chr1.3:62489864-62489883 | None:intergenic | 30.0% |
| AAACCCAATTCAGCTCAAAA+AGG | + | chr1.3:62487693-62487712 | None:intergenic | 35.0% | |
| AAATAGAGCCAACTCTTGAA+AGG | + | chr1.3:62489611-62489630 | None:intergenic | 35.0% | |
| AAGGGATTTGACGTGAAATT+CGG | - | chr1.3:62487263-62487282 | MS.gene03015:intron | 35.0% | |
| AATCTGTCTCCATAAATTGG+AGG | + | chr1.3:62489351-62489370 | None:intergenic | 35.0% | |
| ACTCTATTTGAATGAGGTGT+GGG | + | chr1.3:62487990-62488009 | None:intergenic | 35.0% | |
| AGTATGATCATGGATAGGAA+GGG | - | chr1.3:62487245-62487264 | MS.gene03015:CDS | 35.0% | |
| ATCTGTCTCCATAAATTGGA+GGG | + | chr1.3:62489350-62489369 | None:intergenic | 35.0% | |
| ATTCTGCAGTTTGGAAAAGT+CGG | - | chr1.3:62490041-62490060 | MS.gene03015:CDS | 35.0% | |
| CATACCTGCTCAACAAATAT+GGG | - | chr1.3:62488273-62488292 | MS.gene03015:intron | 35.0% | |
| CCTAACCATTTCAGTTCAAA+AGG | - | chr1.3:62488463-62488482 | MS.gene03015:CDS | 35.0% | |
| GAAAATGTCATTCTGCAGTT+TGG | - | chr1.3:62490032-62490051 | MS.gene03015:CDS | 35.0% | |
| GAGAAATGATATAGTCAGTG+TGG | + | chr1.3:62489146-62489165 | None:intergenic | 35.0% | |
| GATTATTACCTATTGCCTTC+TGG | - | chr1.3:62489249-62489268 | MS.gene03015:intron | 35.0% | |
| GCAAATCTGTCTCCATAAAT+TGG | + | chr1.3:62489354-62489373 | None:intergenic | 35.0% | |
| GCATATTGCAAATGCTTCAA+AGG | + | chr1.3:62490108-62490127 | None:intergenic | 35.0% | |
| GTGATCGTTGAGATTAATGA+AGG | - | chr1.3:62490246-62490265 | MS.gene03015:CDS | 35.0% | |
| GTTCTATATTCTGTGACACA+TGG | - | chr1.3:62488952-62488971 | MS.gene03015:intron | 35.0% | |
| TAACTCATTCTCTTTGAGTG+AGG | - | chr1.3:62488192-62488211 | MS.gene03015:CDS | 35.0% | |
| TCATACCTGCTCAACAAATA+TGG | - | chr1.3:62488272-62488291 | MS.gene03015:intron | 35.0% | |
| TCCTAAAAATGGAGTTTCTG+AGG | - | chr1.3:62490001-62490020 | MS.gene03015:intron | 35.0% | |
| TGCTTAAACTCATGCTACAT+TGG | + | chr1.3:62488696-62488715 | None:intergenic | 35.0% | |
| TGTTAAAAAACAAGGCTCCT+AGG | - | chr1.3:62489892-62489911 | MS.gene03015:intron | 35.0% | |
| TTGAGGTTTCAGATGATACT+TGG | - | chr1.3:62487426-62487445 | MS.gene03015:CDS | 35.0% | |
| TTTAGGCAAAGAGAATATCG+TGG | - | chr1.3:62489512-62489531 | MS.gene03015:intron | 35.0% | |
| ! | AAAACCCATATTTGTTGAGC+AGG | + | chr1.3:62488280-62488299 | None:intergenic | 35.0% |
| ! | ATTATTTTCATCATGCAGCC+TGG | - | chr1.3:62488801-62488820 | MS.gene03015:intron | 35.0% |
| ! | CCTTTTGAACTGAAATGGTT+AGG | + | chr1.3:62488466-62488485 | None:intergenic | 35.0% |
| ! | CTTTTTCTCAGTTTGAACCA+AGG | - | chr1.3:62488885-62488904 | MS.gene03015:intron | 35.0% |
| ! | GTCATTTAGGAGTATGATCA+TGG | - | chr1.3:62487235-62487254 | MS.gene03015:CDS | 35.0% |
| ! | TAAAAATGGAGTTTCTGAGG+AGG | - | chr1.3:62490004-62490023 | MS.gene03015:CDS | 35.0% |
| ! | TCATACAAGTTGAGGTTACA+AGG | + | chr1.3:62489003-62489022 | None:intergenic | 35.0% |
| ! | TTAGGAGTATGATCATGGAT+AGG | - | chr1.3:62487240-62487259 | MS.gene03015:CDS | 35.0% |
| !! | ACATCCTTTTTGAGCTGAAT+TGG | - | chr1.3:62487686-62487705 | MS.gene03015:CDS | 35.0% |
| !! | CATCCTTTTTGAGCTGAATT+GGG | - | chr1.3:62487687-62487706 | MS.gene03015:CDS | 35.0% |
| !! | TCCTCAGAAACTCCATTTTT+AGG | + | chr1.3:62490005-62490024 | None:intergenic | 35.0% |
| AAAGTGATTTCAGACCCAGA+AGG | + | chr1.3:62489267-62489286 | None:intergenic | 40.0% | |
| AATGCTTCAAAGGCAGAGAT+TGG | + | chr1.3:62490098-62490117 | None:intergenic | 40.0% | |
| AGGGATTTGACGTGAAATTC+GGG | - | chr1.3:62487264-62487283 | MS.gene03015:intron | 40.0% | |
| ATACCTCAACTTCCCAACAT+AGG | + | chr1.3:62489202-62489221 | None:intergenic | 40.0% | |
| ATATTCTGTGACACATGGGT+TGG | - | chr1.3:62488957-62488976 | MS.gene03015:intron | 40.0% | |
| ATCATATGAGACATGCACGA+TGG | + | chr1.3:62489442-62489461 | None:intergenic | 40.0% | |
| ATTCGATGCTACTCTTGCAT+TGG | + | chr1.3:62488319-62488338 | None:intergenic | 40.0% | |
| CAATCACTCACAAGCAATCT+TGG | + | chr1.3:62490147-62490166 | None:intergenic | 40.0% | |
| CACTCTATTTGAATGAGGTG+TGG | + | chr1.3:62487991-62488010 | None:intergenic | 40.0% | |
| CACTTGACGTATCTCTCTTT+AGG | - | chr1.3:62489495-62489514 | MS.gene03015:intron | 40.0% | |
| CCAACTCTTGAAAGGAAAGT+AGG | + | chr1.3:62489603-62489622 | None:intergenic | 40.0% | |
| CCTACTTTCCTTTCAAGAGT+TGG | - | chr1.3:62489600-62489619 | MS.gene03015:intron | 40.0% | |
| CTGGTTGCTTCTCCTAAAAA+TGG | - | chr1.3:62489990-62490009 | MS.gene03015:intron | 40.0% | |
| GAAAGAGCAAGAATGTTTCC+TGG | + | chr1.3:62488070-62488089 | None:intergenic | 40.0% | |
| GAGAGAGCAAGAATGATTGT+TGG | - | chr1.3:62488018-62488037 | MS.gene03015:intron | 40.0% | |
| GAGTATGATCATGGATAGGA+AGG | - | chr1.3:62487244-62487263 | MS.gene03015:CDS | 40.0% | |
| GAGTTGGAGAGAAATTGTGA+AGG | - | chr1.3:62487490-62487509 | MS.gene03015:CDS | 40.0% | |
| GATTGGATACTGGTAATCCA+TGG | + | chr1.3:62490081-62490100 | None:intergenic | 40.0% | |
| GGATGTGCTTATGAGAATTG+AGG | - | chr1.3:62487409-62487428 | MS.gene03015:intron | 40.0% | |
| GTTAAGAATTCACCGCATCA+CGG | + | chr1.3:62487968-62487987 | None:intergenic | 40.0% | |
| GTTTGATGTCATTCTCACGT+TGG | - | chr1.3:62487828-62487847 | MS.gene03015:CDS | 40.0% | |
| TAAAAAACAAGGCTCCTAGG+TGG | - | chr1.3:62489895-62489914 | MS.gene03015:intron | 40.0% | |
| TAACTCTTGTTGAGTGAGGT+TGG | - | chr1.3:62488092-62488111 | MS.gene03015:intron | 40.0% | |
| TCACTAACTCTTGTTGAGTG+AGG | - | chr1.3:62488088-62488107 | MS.gene03015:intron | 40.0% | |
| TCATATGAGACATGCACGAT+GGG | + | chr1.3:62489441-62489460 | None:intergenic | 40.0% | |
| TGAAGAAATTGAGTCTGCGT+CGG | + | chr1.3:62489762-62489781 | None:intergenic | 40.0% | |
| TGAAGTTCAAACACCAGCAT+TGG | + | chr1.3:62489932-62489951 | None:intergenic | 40.0% | |
| TGCTGGTGTTTGAACTTCAA+TGG | - | chr1.3:62489933-62489952 | MS.gene03015:intron | 40.0% | |
| TGTTATTGCCAATGGTGCTT+TGG | - | chr1.3:62487328-62487347 | MS.gene03015:intron | 40.0% | |
| TGTTGAGCAGGTATGATTGA+GGG | + | chr1.3:62488268-62488287 | None:intergenic | 40.0% | |
| TTCCTTGTGAATAGTGGCAT+TGG | - | chr1.3:62488508-62488527 | MS.gene03015:intron | 40.0% | |
| TTGTTATCTTGGTTGTTGCG+TGG | - | chr1.3:62487909-62487928 | MS.gene03015:intron | 40.0% | |
| TTGTTGAGCAGGTATGATTG+AGG | + | chr1.3:62488269-62488288 | None:intergenic | 40.0% | |
| TTTGACGTGAAATTCGGGTA+TGG | - | chr1.3:62487269-62487288 | MS.gene03015:intron | 40.0% | |
| ! | ACTAGCTTCCTTGTGAATAG+TGG | - | chr1.3:62488502-62488521 | MS.gene03015:intron | 40.0% |
| ! | ACTGCAGAATGACATTTTCC+TGG | + | chr1.3:62490031-62490050 | None:intergenic | 40.0% |
| ! | AGCTCAGAGTAGTTTGTGAT+TGG | - | chr1.3:62487659-62487678 | MS.gene03015:CDS | 40.0% |
| ! | ATCAATCACCAAAGCACCAT+TGG | + | chr1.3:62487339-62487358 | None:intergenic | 40.0% |
| ! | CTGCAGAATGACATTTTCCT+GGG | + | chr1.3:62490030-62490049 | None:intergenic | 40.0% |
| ! | GGAGCTGGTGTTAAAAAACA+AGG | - | chr1.3:62489884-62489903 | MS.gene03015:intron | 40.0% |
| ! | GTGCTTTGGTGATTGATGAT+GGG | - | chr1.3:62487342-62487361 | MS.gene03015:intron | 40.0% |
| !! | ATCTGAATGTTTTGGGCTCT+AGG | - | chr1.3:62489460-62489479 | MS.gene03015:intron | 40.0% |
| !! | CTGGGTCTGAAATCACTTTT+TGG | - | chr1.3:62489268-62489287 | MS.gene03015:intron | 40.0% |
| !! | GCAAGAATGATTGTTGGCTT+TGG | - | chr1.3:62488024-62488043 | MS.gene03015:intron | 40.0% |
| !! | TGAATAGTGGCATTGGTGTA+AGG | - | chr1.3:62488515-62488534 | MS.gene03015:intron | 40.0% |
| !! | TTATCAAAGGTGCTGCTGAT+TGG | + | chr1.3:62489851-62489870 | None:intergenic | 40.0% |
| !!! | AGTTGCTGATTTTACTTGGC+AGG | - | chr1.3:62490276-62490295 | MS.gene03015:CDS | 40.0% |
| AAAATGTTAACAGGGGCCCT+AGG | - | chr1.3:62489676-62489695 | MS.gene03015:intron | 45.0% | |
| AAGAAATTGAGTCTGCGTCG+GGG | + | chr1.3:62489760-62489779 | None:intergenic | 45.0% | |
| ACATCCCTCAAAAGCTCATG+GGG | + | chr1.3:62487395-62487414 | None:intergenic | 45.0% | |
| AGAAGGAGTAGCACCTATGT+TGG | - | chr1.3:62489186-62489205 | MS.gene03015:intron | 45.0% | |
| CAAAGGCAGAGATTGGATAC+TGG | + | chr1.3:62490091-62490110 | None:intergenic | 45.0% | |
| CACATCCCTCAAAAGCTCAT+GGG | + | chr1.3:62487396-62487415 | None:intergenic | 45.0% | |
| CACCAATGCCACTATTCACA+AGG | + | chr1.3:62488513-62488532 | None:intergenic | 45.0% | |
| CTGATTGGAGATTCTCTGAG+CGG | + | chr1.3:62489836-62489855 | None:intergenic | 45.0% | |
| CTTTGAGTGAGGTGTGAGTT+GGG | - | chr1.3:62488203-62488222 | MS.gene03015:CDS | 45.0% | |
| GAAGAAATTGAGTCTGCGTC+GGG | + | chr1.3:62489761-62489780 | None:intergenic | 45.0% | |
| GAAGGAGTAGCACCTATGTT+GGG | - | chr1.3:62489187-62489206 | MS.gene03015:intron | 45.0% | |
| GATCTGAAGAACGGGATAGA+TGG | + | chr1.3:62489804-62489823 | None:intergenic | 45.0% | |
| GATGCACACCCTCCAATTTA+TGG | - | chr1.3:62489339-62489358 | MS.gene03015:intron | 45.0% | |
| GATTGCTTGTGAGTGATTGC+TGG | - | chr1.3:62490148-62490167 | MS.gene03015:CDS | 45.0% | |
| GCAAAGAGAATATCGTGGTC+TGG | - | chr1.3:62489517-62489536 | MS.gene03015:intron | 45.0% | |
| GCAGTTTGGAAAAGTCGGAA+AGG | - | chr1.3:62490046-62490065 | MS.gene03015:CDS | 45.0% | |
| GTTGAGCAGGTATGATTGAG+GGG | + | chr1.3:62488267-62488286 | None:intergenic | 45.0% | |
| TAGTTTCCTGCAGGAACTCT+TGG | + | chr1.3:62489417-62489436 | None:intergenic | 45.0% | |
| TCAGACCTGCAATACTGTGA+GGG | + | chr1.3:62490322-62490341 | None:intergenic | 45.0% | |
| TCTTTGAGTGAGGTGTGAGT+TGG | - | chr1.3:62488202-62488221 | MS.gene03015:CDS | 45.0% | |
| TGATTGGAGATTCTCTGAGC+GGG | + | chr1.3:62489835-62489854 | None:intergenic | 45.0% | |
| TTGTGAGTGATTGCTGGAAC+AGG | - | chr1.3:62490154-62490173 | MS.gene03015:CDS | 45.0% | |
| TTGTTGAGCAGGAATGGTTG+AGG | - | chr1.3:62487880-62487899 | MS.gene03015:intron | 45.0% | |
| TTTCAGACCCAGAAGGCAAT+AGG | + | chr1.3:62489260-62489279 | None:intergenic | 45.0% | |
| TTTGCAGCCTCAACTGATGA+CGG | - | chr1.3:62489081-62489100 | MS.gene03015:intron | 45.0% | |
| ! | AAGTCAAAATGATGGGGAGC+TGG | - | chr1.3:62489869-62489888 | MS.gene03015:intron | 45.0% |
| ! | ATGGGTTGAGTCAGAGTTGT+TGG | - | chr1.3:62487360-62487379 | MS.gene03015:intron | 45.0% |
| ! | GGTGCTTTGGTGATTGATGA+TGG | - | chr1.3:62487341-62487360 | MS.gene03015:intron | 45.0% |
| ! | TGGGTTGAGTCAGAGTTGTT+GGG | - | chr1.3:62487361-62487380 | MS.gene03015:intron | 45.0% |
| !! | AACTTGCTGGACAATTGAGG+AGG | + | chr1.3:62487527-62487546 | None:intergenic | 45.0% |
| !! | AGGTTTTAGCCAGGTGGAAT+TGG | - | chr1.3:62490296-62490315 | MS.gene03015:CDS | 45.0% |
| !! | CTGTTACTTTGGTTGTTGCG+TGG | + | chr1.3:62488240-62488259 | None:intergenic | 45.0% |
| !! | GTCAACTTGCTGGACAATTG+AGG | + | chr1.3:62487530-62487549 | None:intergenic | 45.0% |
| !! | TCTTGGTGTCAAAGCTGCTA+AGG | + | chr1.3:62490130-62490149 | None:intergenic | 45.0% |
| !! | TGAGGAGTGGGTTGTTATCT+TGG | - | chr1.3:62487898-62487917 | MS.gene03015:intron | 45.0% |
| !! | TTACTTGGCAGGTTTTAGCC+AGG | - | chr1.3:62490287-62490306 | MS.gene03015:CDS | 45.0% |
| !! | TTGTTGAGTGAGGTTGGCTT+TGG | - | chr1.3:62488098-62488117 | MS.gene03015:CDS | 45.0% |
| !! | TTTTAGGAGAAGCAACCAGC+TGG | + | chr1.3:62489989-62490008 | None:intergenic | 45.0% |
| ACCTTGGTTGTTCCGTGATG+CGG | - | chr1.3:62487953-62487972 | MS.gene03015:intron | 50.0% | |
| ACGATGGGATAGTTTCCTGC+AGG | + | chr1.3:62489426-62489445 | None:intergenic | 50.0% | |
| AGCAGGAATGGTTGAGGAGT+GGG | - | chr1.3:62487886-62487905 | MS.gene03015:intron | 50.0% | |
| AGCAGGTATGATTGAGGGGT+GGG | + | chr1.3:62488263-62488282 | None:intergenic | 50.0% | |
| ATCACGGAACAACCAAGGTG+TGG | + | chr1.3:62487952-62487971 | None:intergenic | 50.0% | |
| ATCTTGGTTGTTGCGTGGCT+CGG | - | chr1.3:62487914-62487933 | MS.gene03015:intron | 50.0% | |
| ATTCCCTGTCTCCTTGAAGC+AGG | - | chr1.3:62487550-62487569 | MS.gene03015:CDS | 50.0% | |
| ATTGGCCCTCACAGTATTGC+AGG | - | chr1.3:62490314-62490333 | MS.gene03015:CDS | 50.0% | |
| CACTGAATAAGAGAGCCCCT+TGG | + | chr1.3:62488828-62488847 | None:intergenic | 50.0% | |
| CACTTGCTTGAGACTTAGCC+TGG | + | chr1.3:62489391-62489410 | None:intergenic | 50.0% | |
| CAGATGATACTTGGCCGACT+CGG | - | chr1.3:62487435-62487454 | MS.gene03015:CDS | 50.0% | |
| CGGAAAGGATGTGTTCACCA+TGG | - | chr1.3:62490061-62490080 | MS.gene03015:CDS | 50.0% | |
| CTACCTGCTTCAAGGAGACA+GGG | + | chr1.3:62487556-62487575 | None:intergenic | 50.0% | |
| GAACAACCAAGGTGTGGGTT+GGG | + | chr1.3:62487946-62487965 | None:intergenic | 50.0% | |
| GAACTTGCCGTCATCAGTTG+AGG | + | chr1.3:62489091-62489110 | None:intergenic | 50.0% | |
| GACAAGTGCTACCTGCTTCA+AGG | + | chr1.3:62487564-62487583 | None:intergenic | 50.0% | |
| GACAGGGAATGTCAACTTGC+TGG | + | chr1.3:62487540-62487559 | None:intergenic | 50.0% | |
| GCACATCCCTCAAAAGCTCA+TGG | + | chr1.3:62487397-62487416 | None:intergenic | 50.0% | |
| GCACCTATGTTGGGAAGTTG+AGG | - | chr1.3:62489196-62489215 | MS.gene03015:intron | 50.0% | |
| GCGACAACATTCTTCCGAGT+CGG | + | chr1.3:62487452-62487471 | None:intergenic | 50.0% | |
| GGCATGAACAACTCCAATGC+TGG | - | chr1.3:62489916-62489935 | MS.gene03015:intron | 50.0% | |
| TCACGGAACAACCAAGGTGT+GGG | + | chr1.3:62487951-62487970 | None:intergenic | 50.0% | |
| TCTCCAACTCCTGCAAACAC+CGG | + | chr1.3:62487480-62487499 | None:intergenic | 50.0% | |
| TGAATTCCCAACCCACACCT+TGG | - | chr1.3:62487937-62487956 | MS.gene03015:intron | 50.0% | |
| TGGAGTTGTTCATGCCACCT+AGG | + | chr1.3:62489912-62489931 | None:intergenic | 50.0% | |
| TTGCTTGAGACTTAGCCTGG+TGG | + | chr1.3:62489388-62489407 | None:intergenic | 50.0% | |
| ! | ACATGCCCCATGAGCTTTTG+AGG | - | chr1.3:62487387-62487406 | MS.gene03015:intron | 50.0% |
| ! | CATGCCCCATGAGCTTTTGA+GGG | - | chr1.3:62487388-62487407 | MS.gene03015:intron | 50.0% |
| !! | TGTGACACATGGGTTGGACT+GGG | - | chr1.3:62488963-62488982 | MS.gene03015:intron | 50.0% |
| AAGAATGTTGTCGCGTGCGC+CGG | - | chr1.3:62487458-62487477 | MS.gene03015:CDS | 55.0% | |
| ACCGCATCACGGAACAACCA+AGG | + | chr1.3:62487957-62487976 | None:intergenic | 55.0% | |
| ACCTCCAGGTTCAACAGCTG+AGG | + | chr1.3:62489733-62489752 | None:intergenic | 55.0% | |
| AGCTGTTGAACCTGGAGGTG+TGG | - | chr1.3:62489734-62489753 | MS.gene03015:intron | 55.0% | |
| ATAAGAGAGCCCCTTGGACC+AGG | + | chr1.3:62488822-62488841 | None:intergenic | 55.0% | |
| ATCATGCAGCCTGGTCCAAG+GGG | - | chr1.3:62488810-62488829 | MS.gene03015:intron | 55.0% | |
| ATCTCTGGCAGCACTCACCT+TGG | + | chr1.3:62488905-62488924 | None:intergenic | 55.0% | |
| CAGGTTCAACAGCTGAGGCA+GGG | + | chr1.3:62489728-62489747 | None:intergenic | 55.0% | |
| CATCATGCAGCCTGGTCCAA+GGG | - | chr1.3:62488809-62488828 | MS.gene03015:intron | 55.0% | |
| GACACTTGCGTGCAGCAAGA+AGG | + | chr1.3:62489113-62489132 | None:intergenic | 55.0% | |
| GAGCAGGAATGGTTGAGGAG+TGG | - | chr1.3:62487885-62487904 | MS.gene03015:intron | 55.0% | |
| GAGCAGGTATGATTGAGGGG+TGG | + | chr1.3:62488264-62488283 | None:intergenic | 55.0% | |
| GCTACCTGCTTCAAGGAGAC+AGG | + | chr1.3:62487557-62487576 | None:intergenic | 55.0% | |
| GGAACAACCAAGGTGTGGGT+TGG | + | chr1.3:62487947-62487966 | None:intergenic | 55.0% | |
| GTGTCTCCAAGAGTTCCTGC+AGG | - | chr1.3:62489408-62489427 | MS.gene03015:intron | 55.0% | |
| TCATCATGCAGCCTGGTCCA+AGG | - | chr1.3:62488808-62488827 | MS.gene03015:intron | 55.0% | |
| TTCAACAGCTGAGGCAGGGA+TGG | + | chr1.3:62489724-62489743 | None:intergenic | 55.0% | |
| ! | TGAGACTTAGCCTGGTGGTG+CGG | + | chr1.3:62489383-62489402 | None:intergenic | 55.0% |
| !! | CTGTGACACATGGGTTGGAC+TGG | - | chr1.3:62488962-62488981 | MS.gene03015:intron | 55.0% |
| !! | CTTGGCAGGTTTTAGCCAGG+TGG | - | chr1.3:62490290-62490309 | MS.gene03015:CDS | 55.0% |
| !! | TGAGGGGTGGGCTGTTACTT+TGG | + | chr1.3:62488251-62488270 | None:intergenic | 55.0% |
| CCAGGTTCAACAGCTGAGGC+AGG | + | chr1.3:62489729-62489748 | None:intergenic | 60.0% | |
| CCTGCCTCAGCTGTTGAACC+TGG | - | chr1.3:62489726-62489745 | MS.gene03015:intron | 60.0% | |
| CTGTGAGGGCCAATTCCACC+TGG | + | chr1.3:62490308-62490327 | None:intergenic | 60.0% | |
| GCCTCAGCTGTTGAACCTGG+AGG | - | chr1.3:62489729-62489748 | MS.gene03015:intron | 60.0% | |
| TTGCAAAGTCCCGCACCACC+AGG | - | chr1.3:62489370-62489389 | MS.gene03015:intron | 60.0% | |
| ! | GAGACTTAGCCTGGTGGTGC+GGG | + | chr1.3:62489382-62489401 | None:intergenic | 60.0% |
| ! | TGGAGTTTCTGAGGAGGCCC+AGG | - | chr1.3:62490010-62490029 | MS.gene03015:CDS | 60.0% |
| ! | GCGCCGGTGTTTGCAGGAGT+TGG | - | chr1.3:62487474-62487493 | MS.gene03015:CDS | 65.0% |
| ! | TCGCGTGCGCCGGTGTTTGC+AGG | - | chr1.3:62487468-62487487 | MS.gene03015:CDS | 70.0% |
| TGCGTCGGGGCCACACCTCC+AGG | + | chr1.3:62489747-62489766 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 62487233 | 62490341 | 62487233 | ID=MS.gene03015 |
| chr1.3 | mRNA | 62487233 | 62490341 | 62487233 | ID=MS.gene03015.t1;Parent=MS.gene03015 |
| chr1.3 | exon | 62490003 | 62490341 | 62490003 | ID=MS.gene03015.t1.exon1;Parent=MS.gene03015.t1 |
| chr1.3 | CDS | 62490003 | 62490341 | 62490003 | ID=cds.MS.gene03015.t1;Parent=MS.gene03015.t1 |
| chr1.3 | exon | 62488668 | 62488755 | 62488668 | ID=MS.gene03015.t1.exon2;Parent=MS.gene03015.t1 |
| chr1.3 | CDS | 62488668 | 62488755 | 62488668 | ID=cds.MS.gene03015.t1;Parent=MS.gene03015.t1 |
| chr1.3 | exon | 62488357 | 62488486 | 62488357 | ID=MS.gene03015.t1.exon3;Parent=MS.gene03015.t1 |
| chr1.3 | CDS | 62488357 | 62488486 | 62488357 | ID=cds.MS.gene03015.t1;Parent=MS.gene03015.t1 |
| chr1.3 | exon | 62488093 | 62488269 | 62488093 | ID=MS.gene03015.t1.exon4;Parent=MS.gene03015.t1 |
| chr1.3 | CDS | 62488093 | 62488269 | 62488093 | ID=cds.MS.gene03015.t1;Parent=MS.gene03015.t1 |
| chr1.3 | exon | 62487419 | 62487885 | 62487419 | ID=MS.gene03015.t1.exon5;Parent=MS.gene03015.t1 |
| chr1.3 | CDS | 62487419 | 62487885 | 62487419 | ID=cds.MS.gene03015.t1;Parent=MS.gene03015.t1 |
| chr1.3 | exon | 62487233 | 62487276 | 62487233 | ID=MS.gene03015.t1.exon6;Parent=MS.gene03015.t1 |
| chr1.3 | CDS | 62487233 | 62487276 | 62487233 | ID=cds.MS.gene03015.t1;Parent=MS.gene03015.t1 |
| Gene Sequence |
| Protein sequence |
