Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027122.t1 | XP_003600052.1 | 96.2 | 425 | 16 | 0 | 11 | 435 | 71 | 495 | 2.80E-213 | 751.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027122.t1 | Q8RWQ5 | 64.5 | 425 | 146 | 2 | 11 | 435 | 71 | 490 | 1.8e-139 | 497.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027122.t1 | G7IXK2 | 96.2 | 425 | 16 | 0 | 11 | 435 | 71 | 495 | 2.0e-213 | 751.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027122 | MS.gene016058 | PPI |
| MS.gene016060 | MS.gene027122 | PPI |
| MS.gene33133 | MS.gene027122 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027122.t1 | MTR_3g051190 | 98.353 | 425 | 7 | 0 | 11 | 435 | 71 | 495 | 0.0 | 844 |
| MS.gene027122.t1 | MTR_3g008470 | 29.496 | 417 | 236 | 3 | 11 | 427 | 156 | 514 | 1.80e-46 | 168 |
| MS.gene027122.t1 | MTR_2g031790 | 36.190 | 210 | 134 | 0 | 219 | 428 | 117 | 326 | 2.16e-38 | 142 |
| MS.gene027122.t1 | MTR_2g031810 | 35.238 | 210 | 136 | 0 | 219 | 428 | 140 | 349 | 7.01e-36 | 135 |
| MS.gene027122.t1 | MTR_1g014250 | 26.133 | 375 | 209 | 6 | 58 | 428 | 29 | 339 | 5.71e-30 | 120 |
| MS.gene027122.t1 | MTR_1g014250 | 31.222 | 221 | 143 | 3 | 216 | 428 | 243 | 462 | 5.30e-28 | 116 |
| MS.gene027122.t1 | MTR_1g103530 | 26.567 | 335 | 188 | 6 | 13 | 347 | 4 | 280 | 5.15e-19 | 89.4 |
| MS.gene027122.t1 | MTR_1g103530 | 26.724 | 348 | 191 | 7 | 12 | 359 | 168 | 451 | 7.11e-19 | 89.7 |
| MS.gene027122.t1 | MTR_2g031770 | 29.371 | 143 | 92 | 2 | 11 | 145 | 78 | 219 | 6.82e-16 | 77.4 |
| MS.gene027122.t1 | MTR_1g103540 | 44.318 | 88 | 41 | 2 | 334 | 416 | 1 | 85 | 4.76e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027122.t1 | AT5G54860 | 64.000 | 425 | 148 | 2 | 11 | 435 | 71 | 490 | 0.0 | 546 |
| MS.gene027122.t1 | AT2G33280 | 29.314 | 423 | 239 | 6 | 11 | 432 | 31 | 394 | 4.19e-39 | 146 |
| MS.gene027122.t1 | AT2G33280 | 29.314 | 423 | 239 | 6 | 11 | 432 | 139 | 502 | 7.45e-39 | 147 |
| MS.gene027122.t1 | AT2G32040 | 29.630 | 405 | 226 | 7 | 12 | 416 | 51 | 396 | 4.14e-37 | 140 |
| MS.gene027122.t1 | AT2G32040 | 29.383 | 405 | 227 | 7 | 12 | 416 | 182 | 527 | 3.46e-36 | 140 |
| MS.gene027122.t1 | AT1G04570 | 33.962 | 212 | 140 | 0 | 216 | 427 | 137 | 348 | 1.55e-34 | 133 |
| MS.gene027122.t1 | AT1G64890 | 34.906 | 212 | 138 | 0 | 219 | 430 | 221 | 432 | 8.49e-34 | 132 |
| MS.gene027122.t1 | AT1G04570 | 33.962 | 212 | 140 | 0 | 216 | 427 | 285 | 496 | 2.04e-33 | 132 |
| MS.gene027122.t1 | AT2G33280 | 29.551 | 379 | 207 | 6 | 55 | 432 | 1 | 320 | 5.82e-33 | 127 |
| MS.gene027122.t1 | AT1G79710 | 25.412 | 425 | 241 | 9 | 11 | 428 | 106 | 461 | 2.60e-32 | 128 |
| MS.gene027122.t1 | AT1G79710 | 25.412 | 425 | 241 | 9 | 11 | 428 | 106 | 461 | 2.60e-32 | 128 |
| MS.gene027122.t1 | AT5G10820 | 25.238 | 420 | 249 | 6 | 11 | 427 | 114 | 471 | 7.34e-32 | 127 |
| MS.gene027122.t1 | AT5G25040 | 25.701 | 428 | 258 | 11 | 11 | 428 | 103 | 480 | 4.16e-30 | 122 |
| MS.gene027122.t1 | AT5G25050 | 28.636 | 220 | 150 | 2 | 216 | 428 | 238 | 457 | 2.87e-26 | 111 |
| MS.gene027122.t1 | AT5G25040 | 27.442 | 215 | 153 | 1 | 217 | 428 | 94 | 308 | 5.92e-26 | 108 |
| MS.gene027122.t1 | AT5G25040 | 27.442 | 215 | 153 | 1 | 217 | 428 | 241 | 455 | 3.52e-25 | 108 |
| MS.gene027122.t1 | AT5G25040 | 26.230 | 183 | 132 | 1 | 217 | 396 | 241 | 423 | 4.47e-17 | 83.6 |
| MS.gene027122.t1 | AT1G79710 | 21.547 | 362 | 208 | 9 | 11 | 365 | 106 | 398 | 3.83e-15 | 77.4 |
Find 97 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATTGTATCCCGATTAA+AGG | 0.188248 | 3.4:+48387137 | MS.gene027122:CDS |
| TTGGAGGTCTCCTGCAAATT+TGG | 0.211585 | 3.4:-48387948 | None:intergenic |
| GATGCACCTGTTGCTTCTTT+TGG | 0.267349 | 3.4:-48390595 | None:intergenic |
| ATCCGTTTACTTCCTTTAAT+CGG | 0.280491 | 3.4:-48387149 | None:intergenic |
| CTCCAGAATCTTCGATTTGC+TGG | 0.283430 | 3.4:-48388290 | None:intergenic |
| ATGCCTTTCCTAATCTTATC+TGG | 0.289468 | 3.4:+48390367 | MS.gene027122:CDS |
| TTTGGCTCGGCACTTGTTGA+TGG | 0.295783 | 3.4:+48389415 | MS.gene027122:CDS |
| TTCTAAGCGTCATATGCTTT+AGG | 0.310369 | 3.4:-48389201 | None:intergenic |
| TTGGTCAGGGCCAAATTTGC+AGG | 0.328122 | 3.4:+48387938 | MS.gene027122:intron |
| GGAATATGCGGGAGTTTGTT+AGG | 0.329268 | 3.4:+48388001 | MS.gene027122:CDS |
| ATCATAAATTGCTTTCTTCA+AGG | 0.337183 | 3.4:-48388347 | None:intergenic |
| AATAAAGTTCCTTCAATTCC+TGG | 0.338588 | 3.4:-48390403 | None:intergenic |
| TACCAGCAAATCGAAGATTC+TGG | 0.353963 | 3.4:+48388288 | MS.gene027122:CDS |
| TCGCCTTTGGTGTACCAGAT+AGG | 0.358572 | 3.4:+48389380 | MS.gene027122:CDS |
| GATAGGGTTATGGTGCTCTT+TGG | 0.362387 | 3.4:+48389397 | MS.gene027122:CDS |
| GAATAAGACTGTTGAAAGAT+TGG | 0.368387 | 3.4:-48389074 | None:intergenic |
| AAAGCTCGAAGCATCATTCT+TGG | 0.370525 | 3.4:+48389117 | MS.gene027122:CDS |
| TCTATATTGAACATAGATTC+AGG | 0.374425 | 3.4:+48390493 | MS.gene027122:CDS |
| ATTGGTTACCTCAAAATCAT+TGG | 0.394424 | 3.4:-48388391 | None:intergenic |
| TCCGTTTACTTCCTTTAATC+GGG | 0.395107 | 3.4:-48387148 | None:intergenic |
| AAGTAAACGGATTTCGTACT+TGG | 0.400717 | 3.4:+48387160 | MS.gene027122:CDS |
| TGAAAGAAGGCAAGATCTTA+AGG | 0.404521 | 3.4:+48386892 | MS.gene027122:CDS |
| AAGAGCACCATAACCCTATC+TGG | 0.416214 | 3.4:-48389394 | None:intergenic |
| ATCTTGGTCTTCAATGGCTG+TGG | 0.416452 | 3.4:+48387976 | MS.gene027122:CDS |
| GAATATGCGGGAGTTTGTTA+GGG | 0.418448 | 3.4:+48388002 | MS.gene027122:CDS |
| AAGCTCGAAGCATCATTCTT+GGG | 0.419923 | 3.4:+48389118 | MS.gene027122:CDS |
| GTACGCGTTGTTGGTTGGTT+AGG | 0.423916 | 3.4:+48389145 | MS.gene027122:CDS |
| AAGGCAAGATCTTAAGGTTA+AGG | 0.427752 | 3.4:+48386898 | MS.gene027122:CDS |
| TTGGGGACGGTACGCGTTGT+TGG | 0.428599 | 3.4:+48389136 | MS.gene027122:CDS |
| TGGTGTACCAGATAGGGTTA+TGG | 0.430972 | 3.4:+48389387 | MS.gene027122:CDS |
| GCAAAGGATTTGCATACAAA+TGG | 0.433365 | 3.4:+48388160 | MS.gene027122:CDS |
| ATCAGAAACAGAAAAGCAAT+TGG | 0.433826 | 3.4:-48390571 | None:intergenic |
| GAGACCTCCAATCGTTATCT+TGG | 0.445839 | 3.4:+48387960 | MS.gene027122:CDS |
| ATCGTTATCTTGGTCTTCAA+TGG | 0.449351 | 3.4:+48387970 | MS.gene027122:CDS |
| AATAAGACTGTTGAAAGATT+GGG | 0.450409 | 3.4:-48389073 | None:intergenic |
| CTGTGCTCTCCCTTGTACCA+TGG | 0.460291 | 3.4:+48387192 | MS.gene027122:CDS |
| CTATGCCCTCCAGGAATTGA+AGG | 0.462869 | 3.4:+48390394 | MS.gene027122:CDS |
| CGCCTTTGGTGTACCAGATA+GGG | 0.464246 | 3.4:+48389381 | MS.gene027122:CDS |
| TTTCATGTCAATAAACAACT+TGG | 0.464904 | 3.4:+48390432 | MS.gene027122:CDS |
| ATAGTTGTCCAGATAAGATT+AGG | 0.465222 | 3.4:-48390375 | None:intergenic |
| TGGAGGACAGACCTATGTCT+TGG | 0.476709 | 3.4:+48389026 | MS.gene027122:intron |
| TTCTTGACTGTGCAAAACTT+AGG | 0.479731 | 3.4:+48387269 | MS.gene027122:CDS |
| TCCCGATTAAAGGAAGTAAA+CGG | 0.487254 | 3.4:+48387147 | MS.gene027122:CDS |
| TCTGGAGAAAGGAGATTCCT+TGG | 0.489789 | 3.4:+48388306 | MS.gene027122:CDS |
| CTAAAATAAACCATGGTACA+AGG | 0.490097 | 3.4:-48387202 | None:intergenic |
| CTGATACCAAAAGAAGCAAC+AGG | 0.498367 | 3.4:+48390589 | MS.gene027122:CDS |
| GGTTATGGTGCTCTTTGGCT+CGG | 0.505871 | 3.4:+48389402 | MS.gene027122:CDS |
| TCTTGGTCTTCAATGGCTGT+GGG | 0.509990 | 3.4:+48387977 | MS.gene027122:CDS |
| CAGGTATGCTCATGTTGCGT+TGG | 0.512392 | 3.4:+48389312 | MS.gene027122:intron |
| TCTGGACAACTATGCCCTCC+AGG | 0.515434 | 3.4:+48390385 | MS.gene027122:CDS |
| AACAACTTGGGAACAACGAT+AGG | 0.523273 | 3.4:+48390445 | MS.gene027122:CDS |
| TGCAGATTGCCGTTGTGTCT+AGG | 0.528098 | 3.4:+48389350 | MS.gene027122:CDS |
| GGACGGTACGCGTTGTTGGT+TGG | 0.528967 | 3.4:+48389140 | MS.gene027122:CDS |
| TTCATGTCAATAAACAACTT+GGG | 0.529203 | 3.4:+48390433 | MS.gene027122:CDS |
| AAATCGAAGATTCTGGAGAA+AGG | 0.536470 | 3.4:+48388295 | MS.gene027122:CDS |
| TTGAAGACCAAGATAACGAT+TGG | 0.540367 | 3.4:-48387967 | None:intergenic |
| AGTTGAGGATTATATTGCAA+AGG | 0.550493 | 3.4:+48388144 | MS.gene027122:CDS |
| CTTGTCATATCTTACAGCCT+CGG | 0.554473 | 3.4:-48387330 | None:intergenic |
| GCGTCATATGCTTTAGGTGA+CGG | 0.557890 | 3.4:-48389195 | None:intergenic |
| AGTCTTATTCTACTACGAAA+CGG | 0.561877 | 3.4:+48389087 | MS.gene027122:CDS |
| AAATTGCTTTCTTCAAGGAA+CGG | 0.565734 | 3.4:-48388342 | None:intergenic |
| GCACAGTCAAGAATACCATC+AGG | 0.566177 | 3.4:-48387259 | None:intergenic |
| AGTAGTACGCTGGATGAAGA+TGG | 0.570136 | 3.4:+48388187 | MS.gene027122:CDS |
| CATGACAATAACTGTATGCA+AGG | 0.574447 | 3.4:-48388082 | None:intergenic |
| ACGGAACCACTTTGTTGCCA+AGG | 0.579684 | 3.4:-48388323 | None:intergenic |
| AATATGCGGGAGTTTGTTAG+GGG | 0.585466 | 3.4:+48388003 | MS.gene027122:CDS |
| AAAGATTGGGAACAGTAATG+TGG | 0.587892 | 3.4:-48389060 | None:intergenic |
| GGTTGGTTAGGACTTATGCT+CGG | 0.594212 | 3.4:+48389157 | MS.gene027122:CDS |
| TGGGAACAGTAATGTGGGCA+AGG | 0.597103 | 3.4:-48389054 | None:intergenic |
| ACAACTTGGGAACAACGATA+GGG | 0.598636 | 3.4:+48390446 | MS.gene027122:CDS |
| AAGACCAAGATAACGATTGG+AGG | 0.600085 | 3.4:-48387964 | None:intergenic |
| GAATTCAACATGGCACCTGA+TGG | 0.602006 | 3.4:+48387244 | MS.gene027122:CDS |
| AGCTCGAAGCATCATTCTTG+GGG | 0.605840 | 3.4:+48389119 | MS.gene027122:CDS |
| ATCAACAACAACATCTGCCA+TGG | 0.606162 | 3.4:-48387297 | None:intergenic |
| CGAAGCATCATTCTTGGGGA+CGG | 0.607115 | 3.4:+48389123 | MS.gene027122:CDS |
| ATGGCTGTGGGAGGAATATG+CGG | 0.607957 | 3.4:+48387989 | MS.gene027122:CDS |
| TGTCCAGATAAGATTAGGAA+AGG | 0.608005 | 3.4:-48390370 | None:intergenic |
| TAAAATAAACCATGGTACAA+GGG | 0.610741 | 3.4:-48387201 | None:intergenic |
| AAGATTGGGAACAGTAATGT+GGG | 0.612894 | 3.4:-48389059 | None:intergenic |
| CAACCTTGAGGAATTCAACA+TGG | 0.615312 | 3.4:+48387234 | MS.gene027122:CDS |
| TGGTCTTCAATGGCTGTGGG+AGG | 0.618541 | 3.4:+48387980 | MS.gene027122:CDS |
| GTGCCATGTTGAATTCCTCA+AGG | 0.618903 | 3.4:-48387237 | None:intergenic |
| AAATGGTAGTAGTAGTACGC+TGG | 0.623642 | 3.4:+48388177 | MS.gene027122:CDS |
| CTTAAACCTAAAATAAACCA+TGG | 0.629672 | 3.4:-48387209 | None:intergenic |
| TAGGTGACGGTTATAAACGA+AGG | 0.632468 | 3.4:-48389182 | None:intergenic |
| GAGATTCCTTGGCAACAAAG+TGG | 0.632737 | 3.4:+48388317 | MS.gene027122:CDS |
| AACCCTATCTGGTACACCAA+AGG | 0.632946 | 3.4:-48389383 | None:intergenic |
| TAGGTTTAAGTTCAACCTTG+AGG | 0.633543 | 3.4:+48387222 | MS.gene027122:CDS |
| AAGTTCCTTCAATTCCTGGA+GGG | 0.637778 | 3.4:-48390399 | None:intergenic |
| TGGCTGTGGGAGGAATATGC+GGG | 0.640200 | 3.4:+48387990 | MS.gene027122:CDS |
| TAAAACTTCGCTATTTACAG+AGG | 0.655075 | 3.4:-48388122 | None:intergenic |
| AATCTGCAGAAGATTCAAGA+AGG | 0.662867 | 3.4:-48389335 | None:intergenic |
| GCAAAACTTAGGATCAGCCA+TGG | 0.664884 | 3.4:+48387280 | MS.gene027122:CDS |
| AAAGTTCCTTCAATTCCTGG+AGG | 0.671510 | 3.4:-48390400 | None:intergenic |
| CTTATTCTACTACGAAACGG+AGG | 0.704156 | 3.4:+48389090 | MS.gene027122:CDS |
| TGTTGATGCGATGATAGCCG+AGG | 0.715574 | 3.4:+48387313 | MS.gene027122:CDS |
| ATATGCGGGAGTTTGTTAGG+GGG | 0.728603 | 3.4:+48388004 | MS.gene027122:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATATAATTATATATGAA+TGG | - | chr3.4:48388506-48388525 | None:intergenic | 10.0% |
| !!! | AAACTATAATGTTTTATATA+GGG | + | chr3.4:48389874-48389893 | MS.gene027122:intron | 10.0% |
| !!! | TTTTTGTAAGTTAAAATAAT+TGG | - | chr3.4:48388755-48388774 | None:intergenic | 10.0% |
| !! | AAAAAAAAATACTATCTTTC+AGG | - | chr3.4:48389671-48389690 | None:intergenic | 15.0% |
| !! | AAAAAAAATACTATCTTTCA+GGG | - | chr3.4:48389670-48389689 | None:intergenic | 15.0% |
| !! | ACTAATAAAAAGTAATGTTT+CGG | + | chr3.4:48388845-48388864 | MS.gene027122:intron | 15.0% |
| !!! | AAAGTAGATATTTGAAATTT+TGG | + | chr3.4:48388418-48388437 | MS.gene027122:intron | 15.0% |
| !!! | ATAGTATTTTTTTTTGCTTA+TGG | + | chr3.4:48389676-48389695 | MS.gene027122:intron | 15.0% |
| !!! | CAAACTATAATGTTTTATAT+AGG | + | chr3.4:48389873-48389892 | MS.gene027122:intron | 15.0% |
| !! | AATACTTAATCATAGAGAAT+AGG | - | chr3.4:48387911-48387930 | None:intergenic | 20.0% |
| !! | AGAAATATATCCATCATAAA+AGG | - | chr3.4:48387567-48387586 | None:intergenic | 20.0% |
| !! | CAAATATCTACTTTAATGAT+TGG | - | chr3.4:48388412-48388431 | None:intergenic | 20.0% |
| !! | TTGATCTATCAACTAAAATA+AGG | - | chr3.4:48387532-48387551 | None:intergenic | 20.0% |
| !!! | AAAAGATGATATCTTCATTT+TGG | + | chr3.4:48389571-48389590 | MS.gene027122:intron | 20.0% |
| !!! | ATGGAGATTATCTTTTTAAT+TGG | - | chr3.4:48388715-48388734 | None:intergenic | 20.0% |
| !!! | CTGTTTACTTTTTAAGATTA+TGG | + | chr3.4:48388441-48388460 | MS.gene027122:intron | 20.0% |
| !!! | TATGTTCTTCTTTTTATTAC+AGG | + | chr3.4:48389293-48389312 | MS.gene027122:intron | 20.0% |
| ! | AAAATTGTGATCACATAAGT+TGG | + | chr3.4:48388773-48388792 | MS.gene027122:intron | 25.0% |
| ! | AAGGATGTAACACAAAAAAA+TGG | - | chr3.4:48390071-48390090 | None:intergenic | 25.0% |
| ! | AATAAGACTGTTGAAAGATT+GGG | - | chr3.4:48389076-48389095 | None:intergenic | 25.0% |
| ! | AATAATTGGCCATAATGTAA+AGG | - | chr3.4:48388741-48388760 | None:intergenic | 25.0% |
| ! | AGTACAAGAAAAAGAAAGAA+GGG | + | chr3.4:48388235-48388254 | MS.gene027122:CDS | 25.0% |
| ! | ATCATAAATTGCTTTCTTCA+AGG | - | chr3.4:48388350-48388369 | None:intergenic | 25.0% |
| ! | ATTAACCAAACCAGAATATA+AGG | - | chr3.4:48387101-48387120 | None:intergenic | 25.0% |
| ! | CAAACATATACATGTAAACA+CGG | - | chr3.4:48387052-48387071 | None:intergenic | 25.0% |
| ! | CTTAAACCTAAAATAAACCA+TGG | - | chr3.4:48387212-48387231 | None:intergenic | 25.0% |
| ! | GCTTATAGATTATACGAAAA+CGG | + | chr3.4:48387810-48387829 | MS.gene027122:intron | 25.0% |
| ! | TAAAATAAACCATGGTACAA+GGG | - | chr3.4:48387204-48387223 | None:intergenic | 25.0% |
| ! | TAAAGGGACTAATTCAATAT+GGG | - | chr3.4:48389740-48389759 | None:intergenic | 25.0% |
| ! | TAGTACAAGAAAAAGAAAGA+AGG | + | chr3.4:48388234-48388253 | MS.gene027122:CDS | 25.0% |
| ! | TCAAATACATTATCTACCAA+GGG | + | chr3.4:48388818-48388837 | MS.gene027122:intron | 25.0% |
| ! | TCAATATGCACAATGAAATT+AGG | - | chr3.4:48387375-48387394 | None:intergenic | 25.0% |
| ! | TCTATATTGAACATAGATTC+AGG | + | chr3.4:48390493-48390512 | MS.gene027122:CDS | 25.0% |
| ! | TGAAGCATAATGATTTGATA+TGG | + | chr3.4:48390044-48390063 | MS.gene027122:intron | 25.0% |
| ! | TGATTAAGTATTTGCTTTGT+TGG | + | chr3.4:48387919-48387938 | MS.gene027122:intron | 25.0% |
| ! | TTAAAGGGACTAATTCAATA+TGG | - | chr3.4:48389741-48389760 | None:intergenic | 25.0% |
| ! | TTCAAATACATTATCTACCA+AGG | + | chr3.4:48388817-48388836 | MS.gene027122:intron | 25.0% |
| ! | TTCATGTCAATAAACAACTT+GGG | + | chr3.4:48390433-48390452 | MS.gene027122:CDS | 25.0% |
| ! | TTTCATGTCAATAAACAACT+TGG | + | chr3.4:48390432-48390451 | MS.gene027122:CDS | 25.0% |
| !! | ACCGAAAAAGTGTATATTAA+AGG | + | chr3.4:48389903-48389922 | MS.gene027122:intron | 25.0% |
| !! | CCGAAAAAGTGTATATTAAA+GGG | + | chr3.4:48389904-48389923 | MS.gene027122:intron | 25.0% |
| !! | TGTTTTCAACACATATTAGT+CGG | - | chr3.4:48387001-48387020 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGTGTTACATCCT+TGG | + | chr3.4:48390070-48390089 | MS.gene027122:intron | 25.0% |
| !!! | CCCTTTAATATACACTTTTT+CGG | - | chr3.4:48389907-48389926 | None:intergenic | 25.0% |
| !!! | CTTTTTAATTGGCTGAAAAT+TGG | - | chr3.4:48388704-48388723 | None:intergenic | 25.0% |
| !!! | TCCAATGTTTGTGTTTTTAT+CGG | + | chr3.4:48388630-48388649 | MS.gene027122:intron | 25.0% |
| AAATTGCTTTCTTCAAGGAA+CGG | - | chr3.4:48388345-48388364 | None:intergenic | 30.0% | |
| AATAAAGTTCCTTCAATTCC+TGG | - | chr3.4:48390406-48390425 | None:intergenic | 30.0% | |
| AATATGTGTTGAAAACAGCA+AGG | + | chr3.4:48387004-48387023 | MS.gene027122:intron | 30.0% | |
| AATTCTCATGTAAGCAACTA+AGG | + | chr3.4:48389225-48389244 | MS.gene027122:intron | 30.0% | |
| ACAAACCTTTAATGTCTACA+TGG | - | chr3.4:48388678-48388697 | None:intergenic | 30.0% | |
| ACCGATAAAAACACAAACAT+TGG | - | chr3.4:48388634-48388653 | None:intergenic | 30.0% | |
| AGTTGAGGATTATATTGCAA+AGG | + | chr3.4:48388144-48388163 | MS.gene027122:CDS | 30.0% | |
| ATAGTTGTCCAGATAAGATT+AGG | - | chr3.4:48390378-48390397 | None:intergenic | 30.0% | |
| ATCAGAAACAGAAAAGCAAT+TGG | - | chr3.4:48390574-48390593 | None:intergenic | 30.0% | |
| ATCCGTTTACTTCCTTTAAT+CGG | - | chr3.4:48387152-48387171 | None:intergenic | 30.0% | |
| ATTGGTTACCTCAAAATCAT+TGG | - | chr3.4:48388394-48388413 | None:intergenic | 30.0% | |
| CTAAAATAAACCATGGTACA+AGG | - | chr3.4:48387205-48387224 | None:intergenic | 30.0% | |
| CTATCTTTCAGGGATTAAAA+AGG | - | chr3.4:48389660-48389679 | None:intergenic | 30.0% | |
| GAATAAGACTGTTGAAAGAT+TGG | - | chr3.4:48389077-48389096 | None:intergenic | 30.0% | |
| TAAAACTTCGCTATTTACAG+AGG | - | chr3.4:48388125-48388144 | None:intergenic | 30.0% | |
| TACAAGAACTAATTCAGCAT+AGG | + | chr3.4:48389813-48389832 | MS.gene027122:intron | 30.0% | |
| TCAAATTAGTCAATCCAAAC+AGG | - | chr3.4:48387689-48387708 | None:intergenic | 30.0% | |
| TCCAAAGACAAAAATCAGAA+GGG | - | chr3.4:48390331-48390350 | None:intergenic | 30.0% | |
| TTCCAAAGACAAAAATCAGA+AGG | - | chr3.4:48390332-48390351 | None:intergenic | 30.0% | |
| TTTGCAGAGTTATCTTTCTA+AGG | + | chr3.4:48387663-48387682 | MS.gene027122:intron | 30.0% | |
| ! | AATAGGTATTACTAGCTTAG+AGG | + | chr3.4:48389989-48390008 | MS.gene027122:intron | 30.0% |
| ! | AGAATCTCTGTTTTATGTTG+TGG | + | chr3.4:48389006-48389025 | MS.gene027122:intron | 30.0% |
| ! | ATAGGTATTACTAGCTTAGA+GGG | + | chr3.4:48389990-48390009 | MS.gene027122:intron | 30.0% |
| ! | ATTATTAGCTTCATTCTGTG+AGG | - | chr3.4:48388957-48388976 | None:intergenic | 30.0% |
| ! | CATTTGTCAACCTTTTATGA+TGG | + | chr3.4:48387554-48387573 | MS.gene027122:intron | 30.0% |
| ! | CTTTTTATTAGTTGAACCCT+TGG | - | chr3.4:48388837-48388856 | None:intergenic | 30.0% |
| ! | GATATTTTTCCTAGACACAA+CGG | - | chr3.4:48389362-48389381 | None:intergenic | 30.0% |
| ! | TCTTTTGACAATCTTCTGTT+AGG | + | chr3.4:48390517-48390536 | MS.gene027122:CDS | 30.0% |
| ! | TGTCTTTGGAAAAAAAATGC+AGG | + | chr3.4:48390341-48390360 | MS.gene027122:intron | 30.0% |
| ! | TTTTTGCTTAAGCATGTGTA+TGG | + | chr3.4:48389491-48389510 | MS.gene027122:intron | 30.0% |
| !! | ACTGTGTGACTTTTTAGTAA+AGG | - | chr3.4:48388215-48388234 | None:intergenic | 30.0% |
| !! | AGTCTTATTCTACTACGAAA+CGG | + | chr3.4:48389087-48389106 | MS.gene027122:CDS | 30.0% |
| !! | CTAAGGATTGTTTTATTGGT+TGG | + | chr3.4:48389242-48389261 | MS.gene027122:intron | 30.0% |
| !! | CTTGTACCATGGTTTATTTT+AGG | + | chr3.4:48387203-48387222 | MS.gene027122:CDS | 30.0% |
| !! | GCAACTAAGGATTGTTTTAT+TGG | + | chr3.4:48389238-48389257 | MS.gene027122:intron | 30.0% |
| !!! | AAATAGCGAAGTTTTAGTTG+AGG | + | chr3.4:48388129-48388148 | MS.gene027122:CDS | 30.0% |
| !!! | AGCTGTTTTTGTAAGCTATT+CGG | - | chr3.4:48387793-48387812 | None:intergenic | 30.0% |
| !!! | TAGTTTGTTCCTCATTGTTT+TGG | - | chr3.4:48389860-48389879 | None:intergenic | 30.0% |
| !!! | TTTTTCAAGCACATCTCAAT+AGG | + | chr3.4:48389972-48389991 | MS.gene027122:intron | 30.0% |
| AAAGATTGGGAACAGTAATG+TGG | - | chr3.4:48389063-48389082 | None:intergenic | 35.0% | |
| AACAAACACACACTCTAATG+AGG | - | chr3.4:48388917-48388936 | None:intergenic | 35.0% | |
| AACATGAAAATCAGCACGAA+TGG | + | chr3.4:48389537-48389556 | MS.gene027122:intron | 35.0% | |
| AAGATTGGGAACAGTAATGT+GGG | - | chr3.4:48389062-48389081 | None:intergenic | 35.0% | |
| AAGGCAAGATCTTAAGGTTA+AGG | + | chr3.4:48386898-48386917 | MS.gene027122:CDS | 35.0% | |
| AATCTGCAGAAGATTCAAGA+AGG | - | chr3.4:48389338-48389357 | None:intergenic | 35.0% | |
| AATTGGCCATAATGTAAAGG+AGG | - | chr3.4:48388738-48388757 | None:intergenic | 35.0% | |
| AGCATAGGCCAAATATTACA+CGG | + | chr3.4:48389828-48389847 | MS.gene027122:intron | 35.0% | |
| AGTCACAAAATTAACCGATC+TGG | - | chr3.4:48387484-48387503 | None:intergenic | 35.0% | |
| ATCAATCCAAATAGACTCCA+AGG | - | chr3.4:48390090-48390109 | None:intergenic | 35.0% | |
| ATGCCTTTCCTAATCTTATC+TGG | + | chr3.4:48390367-48390386 | MS.gene027122:CDS | 35.0% | |
| ATTTACTTTATCACTGCACC+TGG | + | chr3.4:48389942-48389961 | MS.gene027122:intron | 35.0% | |
| CATGACAATAACTGTATGCA+AGG | - | chr3.4:48388085-48388104 | None:intergenic | 35.0% | |
| CCTTTAATGTCTACATGGTT+CGG | - | chr3.4:48388673-48388692 | None:intergenic | 35.0% | |
| CGCATACAATGCAAAGAAAT+TGG | - | chr3.4:48387601-48387620 | None:intergenic | 35.0% | |
| CTTCCAATCTCTCAATACAA+TGG | + | chr3.4:48387428-48387447 | MS.gene027122:intron | 35.0% | |
| GCAAAGGATTTGCATACAAA+TGG | + | chr3.4:48388160-48388179 | MS.gene027122:CDS | 35.0% | |
| GGTTTAGTCCGTGTAATATT+TGG | - | chr3.4:48389839-48389858 | None:intergenic | 35.0% | |
| TCATAGAGAATAGGCATGTT+TGG | - | chr3.4:48387902-48387921 | None:intergenic | 35.0% | |
| TCCCGATTAAAGGAAGTAAA+CGG | + | chr3.4:48387147-48387166 | MS.gene027122:CDS | 35.0% | |
| TCCGTTTACTTCCTTTAATC+GGG | - | chr3.4:48387151-48387170 | None:intergenic | 35.0% | |
| TCTAGGAAAAATATCGCCTT+TGG | + | chr3.4:48389367-48389386 | MS.gene027122:CDS | 35.0% | |
| TCTGATTGTATCCCGATTAA+AGG | + | chr3.4:48387137-48387156 | MS.gene027122:CDS | 35.0% | |
| TGAAAGAAGGCAAGATCTTA+AGG | + | chr3.4:48386892-48386911 | MS.gene027122:CDS | 35.0% | |
| TGAATTATGCATGCACTTCA+TGG | + | chr3.4:48387636-48387655 | MS.gene027122:intron | 35.0% | |
| TGCTTGAAAAAGATGAATCC+AGG | - | chr3.4:48389963-48389982 | None:intergenic | 35.0% | |
| TGTCCAGATAAGATTAGGAA+AGG | - | chr3.4:48390373-48390392 | None:intergenic | 35.0% | |
| TTACATCCTTGGAGTCTATT+TGG | + | chr3.4:48390081-48390100 | MS.gene027122:intron | 35.0% | |
| TTCTAAGCGTCATATGCTTT+AGG | - | chr3.4:48389204-48389223 | None:intergenic | 35.0% | |
| TTCTTGACTGTGCAAAACTT+AGG | + | chr3.4:48387269-48387288 | MS.gene027122:CDS | 35.0% | |
| TTGAAGACCAAGATAACGAT+TGG | - | chr3.4:48387970-48387989 | None:intergenic | 35.0% | |
| TTGGAAGCTTATCTATATGC+AGG | - | chr3.4:48387415-48387434 | None:intergenic | 35.0% | |
| ! | AAATCGAAGATTCTGGAGAA+AGG | + | chr3.4:48388295-48388314 | MS.gene027122:CDS | 35.0% |
| ! | AAGTAAACGGATTTCGTACT+TGG | + | chr3.4:48387160-48387179 | MS.gene027122:CDS | 35.0% |
| ! | AAGTATTTGCTTTGTTGGTC+AGG | + | chr3.4:48387924-48387943 | MS.gene027122:intron | 35.0% |
| ! | AGTATTTGCTTTGTTGGTCA+GGG | + | chr3.4:48387925-48387944 | MS.gene027122:intron | 35.0% |
| ! | ATCGTTATCTTGGTCTTCAA+TGG | + | chr3.4:48387970-48387989 | MS.gene027122:CDS | 35.0% |
| ! | ATCTCTGTTTTATGTTGTGG+AGG | + | chr3.4:48389009-48389028 | MS.gene027122:intron | 35.0% |
| ! | ATTGTCATGCTTTTCTGTGA+AGG | + | chr3.4:48388096-48388115 | MS.gene027122:CDS | 35.0% |
| ! | TAACAGTTTTCATTCCTCAC+TGG | + | chr3.4:48389622-48389641 | MS.gene027122:intron | 35.0% |
| ! | TAGGTTTAAGTTCAACCTTG+AGG | + | chr3.4:48387222-48387241 | MS.gene027122:CDS | 35.0% |
| ! | TGCTTCCTTATATTCTGGTT+TGG | + | chr3.4:48387093-48387112 | MS.gene027122:intron | 35.0% |
| ! | TTAGACAGCCAATGATTTTG+AGG | + | chr3.4:48388383-48388402 | MS.gene027122:CDS | 35.0% |
| !! | TGGTTTGGTTAATGATGAAC+AGG | + | chr3.4:48387108-48387127 | MS.gene027122:intron | 35.0% |
| !! | TTATCTTTCTAAGGCCTGTT+TGG | + | chr3.4:48387672-48387691 | MS.gene027122:intron | 35.0% |
| !!! | ATTCGTGCTGATTTTCATGT+TGG | - | chr3.4:48389538-48389557 | None:intergenic | 35.0% |
| !!! | GCTGTTTTTGTAAGCTATTC+GGG | - | chr3.4:48387792-48387811 | None:intergenic | 35.0% |
| AAAGTTCCTTCAATTCCTGG+AGG | - | chr3.4:48390403-48390422 | None:intergenic | 40.0% | |
| AAATGGTAGTAGTAGTACGC+TGG | + | chr3.4:48388177-48388196 | MS.gene027122:CDS | 40.0% | |
| AACAACTTGGGAACAACGAT+AGG | + | chr3.4:48390445-48390464 | MS.gene027122:CDS | 40.0% | |
| AAGACCAAGATAACGATTGG+AGG | - | chr3.4:48387967-48387986 | None:intergenic | 40.0% | |
| AAGTTCCTTCAATTCCTGGA+GGG | - | chr3.4:48390402-48390421 | None:intergenic | 40.0% | |
| ACAACTTGGGAACAACGATA+GGG | + | chr3.4:48390446-48390465 | MS.gene027122:CDS | 40.0% | |
| ATCAACAACAACATCTGCCA+TGG | - | chr3.4:48387300-48387319 | None:intergenic | 40.0% | |
| CAACCTTGAGGAATTCAACA+TGG | + | chr3.4:48387234-48387253 | MS.gene027122:CDS | 40.0% | |
| CACACTGCTTCCTTATATTC+TGG | + | chr3.4:48387088-48387107 | MS.gene027122:intron | 40.0% | |
| CATAAGCTCTTCACTCTTCA+GGG | + | chr3.4:48390210-48390229 | MS.gene027122:intron | 40.0% | |
| CCGAACCATGTAGACATTAA+AGG | + | chr3.4:48388670-48388689 | MS.gene027122:intron | 40.0% | |
| CGGACTAAACCAAAACAATG+AGG | + | chr3.4:48389848-48389867 | MS.gene027122:intron | 40.0% | |
| CTCCATCCTCCTTTACATTA+TGG | + | chr3.4:48388729-48388748 | MS.gene027122:intron | 40.0% | |
| CTGATACCAAAAGAAGCAAC+AGG | + | chr3.4:48390589-48390608 | MS.gene027122:CDS | 40.0% | |
| CTTATTCTACTACGAAACGG+AGG | + | chr3.4:48389090-48389109 | MS.gene027122:CDS | 40.0% | |
| CTTGTCATATCTTACAGCCT+CGG | - | chr3.4:48387333-48387352 | None:intergenic | 40.0% | |
| GCAAGGAAAAACCAAGACAT+AGG | - | chr3.4:48389040-48389059 | None:intergenic | 40.0% | |
| GGACAAAATTTAAGCCAGTG+AGG | - | chr3.4:48389639-48389658 | None:intergenic | 40.0% | |
| GGTCCATTGTATTGAGAGAT+TGG | - | chr3.4:48387434-48387453 | None:intergenic | 40.0% | |
| TACCAGCAAATCGAAGATTC+TGG | + | chr3.4:48388288-48388307 | MS.gene027122:CDS | 40.0% | |
| TCAATACAATGGACCAGTGA+AGG | + | chr3.4:48387439-48387458 | MS.gene027122:intron | 40.0% | |
| TCATAAGCTCTTCACTCTTC+AGG | + | chr3.4:48390209-48390228 | MS.gene027122:intron | 40.0% | |
| ! | AAAGCTCGAAGCATCATTCT+TGG | + | chr3.4:48389117-48389136 | MS.gene027122:CDS | 40.0% |
| ! | AAGCTCGAAGCATCATTCTT+GGG | + | chr3.4:48389118-48389137 | MS.gene027122:CDS | 40.0% |
| ! | ACAACGATAGGGTCTTTTGT+AGG | + | chr3.4:48390457-48390476 | MS.gene027122:CDS | 40.0% |
| ! | GCCCTTCTGATTTTTGTCTT+TGG | + | chr3.4:48390327-48390346 | MS.gene027122:intron | 40.0% |
| ! | TAGGTGACGGTTATAAACGA+AGG | - | chr3.4:48389185-48389204 | None:intergenic | 40.0% |
| !! | AATATGCGGGAGTTTGTTAG+GGG | + | chr3.4:48388003-48388022 | MS.gene027122:CDS | 40.0% |
| !! | GAATATGCGGGAGTTTGTTA+GGG | + | chr3.4:48388002-48388021 | MS.gene027122:CDS | 40.0% |
| !! | GGGAGTGTTTAATACCAGAT+CGG | + | chr3.4:48387467-48387486 | MS.gene027122:intron | 40.0% |
| AACCCTATCTGGTACACCAA+AGG | - | chr3.4:48389386-48389405 | None:intergenic | 45.0% | |
| AAGCATGTGTATGGTACGAG+AGG | + | chr3.4:48389500-48389519 | MS.gene027122:intron | 45.0% | |
| AAGCTATTCGGGAGAGCTTA+TGG | - | chr3.4:48387781-48387800 | None:intergenic | 45.0% | |
| AGTAGTACGCTGGATGAAGA+TGG | + | chr3.4:48388187-48388206 | MS.gene027122:CDS | 45.0% | |
| ATGTCCGACATCAACACATC+TGG | + | chr3.4:48388556-48388575 | MS.gene027122:intron | 45.0% | |
| CACACACTCTAATGAGGAGT+AGG | - | chr3.4:48388911-48388930 | None:intergenic | 45.0% | |
| GAATTCAACATGGCACCTGA+TGG | + | chr3.4:48387244-48387263 | MS.gene027122:CDS | 45.0% | |
| GAGACCTCCAATCGTTATCT+TGG | + | chr3.4:48387960-48387979 | MS.gene027122:CDS | 45.0% | |
| GAGATTCCTTGGCAACAAAG+TGG | + | chr3.4:48388317-48388336 | MS.gene027122:CDS | 45.0% | |
| GATAGGGTTATGGTGCTCTT+TGG | + | chr3.4:48389397-48389416 | MS.gene027122:CDS | 45.0% | |
| GCAAAACTTAGGATCAGCCA+TGG | + | chr3.4:48387280-48387299 | MS.gene027122:CDS | 45.0% | |
| GCACAGTCAAGAATACCATC+AGG | - | chr3.4:48387262-48387281 | None:intergenic | 45.0% | |
| GGCCATAATGTAAAGGAGGA+TGG | - | chr3.4:48388734-48388753 | None:intergenic | 45.0% | |
| GTGCCATGTTGAATTCCTCA+AGG | - | chr3.4:48387240-48387259 | None:intergenic | 45.0% | |
| TCTGGAGAAAGGAGATTCCT+TGG | + | chr3.4:48388306-48388325 | MS.gene027122:CDS | 45.0% | |
| TGGTGTACCAGATAGGGTTA+TGG | + | chr3.4:48389387-48389406 | MS.gene027122:CDS | 45.0% | |
| TGTCCGACATCAACACATCT+GGG | + | chr3.4:48388557-48388576 | MS.gene027122:intron | 45.0% | |
| TTGGAGGTCTCCTGCAAATT+TGG | - | chr3.4:48387951-48387970 | None:intergenic | 45.0% | |
| ! | AGCTCGAAGCATCATTCTTG+GGG | + | chr3.4:48389119-48389138 | MS.gene027122:CDS | 45.0% |
| ! | ATAGGGTCTTTTGTAGGTGC+TGG | + | chr3.4:48390463-48390482 | MS.gene027122:CDS | 45.0% |
| ! | ATCTTGGTCTTCAATGGCTG+TGG | + | chr3.4:48387976-48387995 | MS.gene027122:CDS | 45.0% |
| ! | CTCCAGAATCTTCGATTTGC+TGG | - | chr3.4:48388293-48388312 | None:intergenic | 45.0% |
| ! | GAGAGCACACTTCAGATTGA+TGG | + | chr3.4:48388525-48388544 | MS.gene027122:intron | 45.0% |
| ! | GCGTCATATGCTTTAGGTGA+CGG | - | chr3.4:48389198-48389217 | None:intergenic | 45.0% |
| ! | GGAATATGCGGGAGTTTGTT+AGG | + | chr3.4:48388001-48388020 | MS.gene027122:CDS | 45.0% |
| ! | GGTTGGTTAGGACTTATGCT+CGG | + | chr3.4:48389157-48389176 | MS.gene027122:CDS | 45.0% |
| ! | GTACCCAGATGTGTTGATGT+CGG | - | chr3.4:48388563-48388582 | None:intergenic | 45.0% |
| ! | TCTTGGTCTTCAATGGCTGT+GGG | + | chr3.4:48387977-48387996 | MS.gene027122:CDS | 45.0% |
| !! | AAGAGCACCATAACCCTATC+TGG | - | chr3.4:48389397-48389416 | None:intergenic | 45.0% |
| !! | ATATGCGGGAGTTTGTTAGG+GGG | + | chr3.4:48388004-48388023 | MS.gene027122:CDS | 45.0% |
| !! | GATGCACCTGTTGCTTCTTT+TGG | - | chr3.4:48390598-48390617 | None:intergenic | 45.0% |
| !!! | ATATATCAATTTTATTTTAA+AGG | - | chr3.4:48389757-48389776 | None:intergenic | 5.0% |
| !!! | TAAAATTGATATATATTTTA+TGG | + | chr3.4:48389763-48389782 | MS.gene027122:intron | 5.0% |
| !!! | TATATCAATTTTATTTTAAA+GGG | - | chr3.4:48389756-48389775 | None:intergenic | 5.0% |
| !!! | TTTGTTTATATTTTTATTTA+TGG | + | chr3.4:48388931-48388950 | MS.gene027122:intron | 5.0% |
| AATGGACCAGTGAAGGTCGA+AGG | + | chr3.4:48387446-48387465 | MS.gene027122:intron | 50.0% | |
| ACGGAACCACTTTGTTGCCA+AGG | - | chr3.4:48388326-48388345 | None:intergenic | 50.0% | |
| ATGGACCAGTGAAGGTCGAA+GGG | + | chr3.4:48387447-48387466 | MS.gene027122:intron | 50.0% | |
| ATGGCTGTGGGAGGAATATG+CGG | + | chr3.4:48387989-48388008 | MS.gene027122:CDS | 50.0% | |
| CAGGTATGCTCATGTTGCGT+TGG | + | chr3.4:48389312-48389331 | MS.gene027122:intron | 50.0% | |
| CTATGCCCTCCAGGAATTGA+AGG | + | chr3.4:48390394-48390413 | MS.gene027122:CDS | 50.0% | |
| GGTTATGGTGCTCTTTGGCT+CGG | + | chr3.4:48389402-48389421 | MS.gene027122:CDS | 50.0% | |
| TGCAGATTGCCGTTGTGTCT+AGG | + | chr3.4:48389350-48389369 | MS.gene027122:CDS | 50.0% | |
| TGGAGGACAGACCTATGTCT+TGG | + | chr3.4:48389026-48389045 | MS.gene027122:intron | 50.0% | |
| TGGGAACAGTAATGTGGGCA+AGG | - | chr3.4:48389057-48389076 | None:intergenic | 50.0% | |
| TGTTGATGCGATGATAGCCG+AGG | + | chr3.4:48387313-48387332 | MS.gene027122:CDS | 50.0% | |
| TTGGTCAGGGCCAAATTTGC+AGG | + | chr3.4:48387938-48387957 | MS.gene027122:intron | 50.0% | |
| ! | CGAAGCATCATTCTTGGGGA+CGG | + | chr3.4:48389123-48389142 | MS.gene027122:CDS | 50.0% |
| ! | CGCCTTTGGTGTACCAGATA+GGG | + | chr3.4:48389381-48389400 | MS.gene027122:CDS | 50.0% |
| ! | GTACGCGTTGTTGGTTGGTT+AGG | + | chr3.4:48389145-48389164 | MS.gene027122:CDS | 50.0% |
| ! | TCGCCTTTGGTGTACCAGAT+AGG | + | chr3.4:48389380-48389399 | MS.gene027122:CDS | 50.0% |
| !! | TTTGGCTCGGCACTTGTTGA+TGG | + | chr3.4:48389415-48389434 | MS.gene027122:CDS | 50.0% |
| !!! | GTCTTTTGTAGGTGCTGGCT+TGG | + | chr3.4:48390468-48390487 | MS.gene027122:CDS | 50.0% |
| ACACTCCCTTCGACCTTCAC+TGG | - | chr3.4:48387455-48387474 | None:intergenic | 55.0% | |
| CTGTGCTCTCCCTTGTACCA+TGG | + | chr3.4:48387192-48387211 | MS.gene027122:CDS | 55.0% | |
| TCTGGACAACTATGCCCTCC+AGG | + | chr3.4:48390385-48390404 | MS.gene027122:CDS | 55.0% | |
| TGGCTGTGGGAGGAATATGC+GGG | + | chr3.4:48387990-48388009 | MS.gene027122:CDS | 55.0% | |
| TGGTCTTCAATGGCTGTGGG+AGG | + | chr3.4:48387980-48387999 | MS.gene027122:CDS | 55.0% | |
| GGACGGTACGCGTTGTTGGT+TGG | + | chr3.4:48389140-48389159 | MS.gene027122:CDS | 60.0% | |
| TTGGGGACGGTACGCGTTGT+TGG | + | chr3.4:48389136-48389155 | MS.gene027122:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 48386891 | 48390624 | 48386891 | ID=MS.gene027122 |
| chr3.4 | mRNA | 48386891 | 48390624 | 48386891 | ID=MS.gene027122.t1;Parent=MS.gene027122 |
| chr3.4 | exon | 48386891 | 48386919 | 48386891 | ID=MS.gene027122.t1.exon1;Parent=MS.gene027122.t1 |
| chr3.4 | CDS | 48386891 | 48386919 | 48386891 | ID=cds.MS.gene027122.t1;Parent=MS.gene027122.t1 |
| chr3.4 | exon | 48387130 | 48387351 | 48387130 | ID=MS.gene027122.t1.exon2;Parent=MS.gene027122.t1 |
| chr3.4 | CDS | 48387130 | 48387351 | 48387130 | ID=cds.MS.gene027122.t1;Parent=MS.gene027122.t1 |
| chr3.4 | exon | 48387946 | 48388404 | 48387946 | ID=MS.gene027122.t1.exon3;Parent=MS.gene027122.t1 |
| chr3.4 | CDS | 48387946 | 48388404 | 48387946 | ID=cds.MS.gene027122.t1;Parent=MS.gene027122.t1 |
| chr3.4 | exon | 48389036 | 48389233 | 48389036 | ID=MS.gene027122.t1.exon4;Parent=MS.gene027122.t1 |
| chr3.4 | CDS | 48389036 | 48389233 | 48389036 | ID=cds.MS.gene027122.t1;Parent=MS.gene027122.t1 |
| chr3.4 | exon | 48389315 | 48389452 | 48389315 | ID=MS.gene027122.t1.exon5;Parent=MS.gene027122.t1 |
| chr3.4 | CDS | 48389315 | 48389452 | 48389315 | ID=cds.MS.gene027122.t1;Parent=MS.gene027122.t1 |
| chr3.4 | exon | 48390363 | 48390624 | 48390363 | ID=MS.gene027122.t1.exon6;Parent=MS.gene027122.t1 |
| chr3.4 | CDS | 48390363 | 48390624 | 48390363 | ID=cds.MS.gene027122.t1;Parent=MS.gene027122.t1 |
| Gene Sequence |
| Protein sequence |
