Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027495.t1 | RHN55186.1 | 84.1 | 503 | 64 | 3 | 1 | 490 | 112 | 611 | 8.60E-182 | 646.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027495.t1 | Q67Y69 | 60.7 | 61 | 24 | 0 | 8 | 68 | 16 | 76 | 2.2e-13 | 78.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027495.t1 | G7K5M5 | 84.1 | 503 | 64 | 3 | 1 | 490 | 1 | 500 | 6.2e-182 | 646.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027495 | MS.gene79013 | PPI |
| MS.gene58579 | MS.gene027495 | PPI |
| MS.gene79013 | MS.gene027495 | PPI |
| MS.gene45165 | MS.gene027495 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027495.t1 | MTR_5g036560 | 91.054 | 503 | 29 | 3 | 1 | 490 | 1 | 500 | 0.0 | 881 |
| MS.gene027495.t1 | MTR_3g086090 | 29.878 | 328 | 193 | 11 | 10 | 316 | 31 | 342 | 5.55e-23 | 103 |
| MS.gene027495.t1 | MTR_3g086090 | 31.405 | 242 | 145 | 8 | 10 | 244 | 31 | 258 | 2.88e-21 | 97.8 |
| MS.gene027495.t1 | MTR_3g086090 | 31.405 | 242 | 145 | 8 | 10 | 244 | 12 | 239 | 3.18e-21 | 97.8 |
| MS.gene027495.t1 | MTR_6g022230 | 67.857 | 56 | 18 | 0 | 7 | 62 | 27 | 82 | 6.21e-19 | 90.1 |
| MS.gene027495.t1 | MTR_0117s0080 | 64.151 | 53 | 19 | 0 | 10 | 62 | 35 | 87 | 2.90e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027495.t1 | AT1G24160 | 36.464 | 543 | 255 | 21 | 6 | 491 | 30 | 539 | 3.28e-66 | 223 |
| MS.gene027495.t1 | AT1G24160 | 36.464 | 543 | 255 | 21 | 6 | 491 | 30 | 539 | 3.28e-66 | 223 |
| MS.gene027495.t1 | AT1G70100 | 37.747 | 506 | 209 | 24 | 6 | 457 | 20 | 473 | 8.21e-58 | 199 |
| MS.gene027495.t1 | AT1G70100 | 37.945 | 506 | 208 | 24 | 6 | 457 | 20 | 473 | 1.51e-57 | 199 |
| MS.gene027495.t1 | AT1G70100 | 37.945 | 506 | 208 | 24 | 6 | 457 | 20 | 473 | 1.51e-57 | 199 |
| MS.gene027495.t1 | AT1G70100 | 37.755 | 490 | 203 | 24 | 6 | 441 | 20 | 461 | 2.84e-55 | 192 |
| MS.gene027495.t1 | AT1G70100 | 37.755 | 490 | 203 | 24 | 6 | 441 | 20 | 461 | 2.84e-55 | 192 |
| MS.gene027495.t1 | AT1G70100 | 37.755 | 490 | 203 | 24 | 6 | 441 | 20 | 461 | 2.84e-55 | 192 |
| MS.gene027495.t1 | AT3G26050 | 52.564 | 78 | 37 | 0 | 8 | 85 | 28 | 105 | 1.48e-19 | 92.0 |
| MS.gene027495.t1 | AT3G27350 | 64.516 | 62 | 21 | 1 | 10 | 70 | 30 | 91 | 2.19e-18 | 85.5 |
| MS.gene027495.t1 | AT3G27350 | 64.516 | 62 | 21 | 1 | 10 | 70 | 30 | 91 | 6.55e-18 | 85.1 |
| MS.gene027495.t1 | AT1G70950 | 60.656 | 61 | 24 | 0 | 8 | 68 | 16 | 76 | 2.77e-17 | 84.7 |
| MS.gene027495.t1 | AT5G40700 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 7.14e-17 | 80.9 |
| MS.gene027495.t1 | AT5G40700 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 1.26e-16 | 80.9 |
| MS.gene027495.t1 | AT5G40700 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 1.30e-16 | 80.9 |
| MS.gene027495.t1 | AT1G23060 | 62.295 | 61 | 23 | 0 | 8 | 68 | 16 | 76 | 3.60e-16 | 80.5 |
| MS.gene027495.t1 | AT1G23060 | 62.295 | 61 | 23 | 0 | 8 | 68 | 16 | 76 | 3.60e-16 | 80.5 |
| MS.gene027495.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 1.82e-14 | 74.7 |
| MS.gene027495.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 1.98e-14 | 75.5 |
| MS.gene027495.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 2.30e-14 | 75.1 |
| MS.gene027495.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 2.65e-14 | 75.1 |
| MS.gene027495.t1 | AT3G27350 | 67.347 | 49 | 15 | 1 | 23 | 70 | 3 | 51 | 3.44e-13 | 70.5 |
Find 109 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCTTCCAAATACTTATT+TGG | 0.140230 | 5.4:+26219949 | None:intergenic |
| CACTGGTTTCTTCTTTGTTT+TGG | 0.160966 | 5.4:+26219225 | None:intergenic |
| ATTCTCTCCAAATAAGTATT+TGG | 0.192425 | 5.4:-26219956 | MS.gene027495:CDS |
| ATCTGCCGCTTCAACTAAAA+AGG | 0.192462 | 5.4:-26219125 | MS.gene027495:CDS |
| ATCTCTCATTATGGATAGTA+TGG | 0.195712 | 5.4:-26218948 | MS.gene027495:CDS |
| ACAACTTTGCGGAAAGAAAA+TGG | 0.230318 | 5.4:-26218651 | MS.gene027495:CDS |
| AAGCAAACCTTAGATTTCTT+TGG | 0.233076 | 5.4:+26219364 | None:intergenic |
| GAGCCAACAATTCGGCTTTC+CGG | 0.260429 | 5.4:+26219851 | None:intergenic |
| GGAGGAGGAAGTTGCGGTTT+TGG | 0.263005 | 5.4:-26219605 | MS.gene027495:CDS |
| AGCCAACAATTCGGCTTTCC+GGG | 0.287622 | 5.4:+26219852 | None:intergenic |
| TTGGCTGGTTAAAATTCTTC+TGG | 0.301994 | 5.4:+26218888 | None:intergenic |
| TATGAGGAAATCTCTCATTA+TGG | 0.319055 | 5.4:-26218957 | MS.gene027495:CDS |
| GACCACGATAAGAAGTTGTT+AGG | 0.334966 | 5.4:+26216956 | None:intergenic |
| GATAGGTTATCCCTGTGAAT+AGG | 0.335244 | 5.4:-26219261 | MS.gene027495:intron |
| TTGCAAGTGTCTGTTTCTTT+TGG | 0.337585 | 5.4:-26220021 | MS.gene027495:CDS |
| ATCAGCCCGGTTGGTGATAT+CGG | 0.358999 | 5.4:-26219655 | MS.gene027495:CDS |
| TTCTTCTGTGCTACTGATCC+AGG | 0.363303 | 5.4:+26219910 | None:intergenic |
| GGATCATCCAAAGAAATCTA+AGG | 0.365888 | 5.4:-26219371 | MS.gene027495:intron |
| TTCCGCAAAGTTGTAGAAGT+TGG | 0.385654 | 5.4:+26218660 | None:intergenic |
| TTCAGATCAGAAGAAAATAA+TGG | 0.389148 | 5.4:-26219796 | MS.gene027495:CDS |
| CTAGAAGTAACTTGCCTCCT+AGG | 0.410045 | 5.4:+26219085 | None:intergenic |
| TTCTTGCTTATCGCGTTCCT+CGG | 0.421641 | 5.4:+26219684 | None:intergenic |
| GGAACAGGATCAGGCTTACT+TGG | 0.429934 | 5.4:+26219007 | None:intergenic |
| ATAGGTTATCCCTGTGAATA+GGG | 0.434793 | 5.4:-26219260 | MS.gene027495:intron |
| TTCCTCATAGTACGAGGAAC+TGG | 0.439423 | 5.4:+26218971 | None:intergenic |
| TTCCAACTTCTACAACTTTG+CGG | 0.441167 | 5.4:-26218662 | MS.gene027495:CDS |
| AAAGCTAAAGCATGATTTCA+AGG | 0.446740 | 5.4:-26216986 | MS.gene027495:CDS |
| TCCATCCTCTCAGCGGTAGC+AGG | 0.446927 | 5.4:+26218081 | None:intergenic |
| CTCCTGCCGATATCACCAAC+CGG | 0.447622 | 5.4:+26219649 | None:intergenic |
| CTTCTCTTGAGCCAACAATT+CGG | 0.451413 | 5.4:+26219843 | None:intergenic |
| GGTTCAGTAGTATGAGGAAC+AGG | 0.451705 | 5.4:+26218992 | None:intergenic |
| TTGCACATGTCTATGAGCTT+AGG | 0.451785 | 5.4:-26219031 | MS.gene027495:CDS |
| AGAAGGAGATGGAGAGGGAG+AGG | 0.454029 | 5.4:-26219825 | MS.gene027495:CDS |
| GATGTAGGCTTTGAACTTCT+CGG | 0.454715 | 5.4:+26219169 | None:intergenic |
| GGCCCGGAAAGCCGAATTGT+TGG | 0.460858 | 5.4:-26219854 | MS.gene027495:CDS |
| CATAGACATGTGCAAAGATC+TGG | 0.461378 | 5.4:+26219039 | None:intergenic |
| CCACCTCAACTGATGAACTT+TGG | 0.468288 | 5.4:+26219575 | None:intergenic |
| CTCAAGAGAAGGAGATGGAG+AGG | 0.471982 | 5.4:-26219831 | MS.gene027495:CDS |
| ACCACGATAAGAAGTTGTTA+GGG | 0.483102 | 5.4:+26216957 | None:intergenic |
| GAGAATAAAGAGGTGGAAAG+TGG | 0.486653 | 5.4:-26219553 | MS.gene027495:CDS |
| GAGTCATGCGGATGATTTGA+AGG | 0.487910 | 5.4:-26219629 | MS.gene027495:CDS |
| TGGAAGTGTTGTACAAACTT+TGG | 0.489754 | 5.4:-26218049 | MS.gene027495:CDS |
| GTCGAAATTTGAGATGCCTT+AGG | 0.493805 | 5.4:+26219193 | None:intergenic |
| GCCCGGTTGGTGATATCGGC+AGG | 0.496567 | 5.4:-26219651 | MS.gene027495:CDS |
| TTGATAATGATTCACTGTCA+TGG | 0.498358 | 5.4:-26219993 | MS.gene027495:CDS |
| GCCTGCTACCGCTGAGAGGA+TGG | 0.498899 | 5.4:-26218082 | MS.gene027495:CDS |
| TGAAGATCTGTCTTCTTCTA+CGG | 0.498983 | 5.4:+26218859 | None:intergenic |
| GAAGGAGGAGGAGGAAGTTG+CGG | 0.503678 | 5.4:-26219611 | MS.gene027495:CDS |
| TGATAATGATTCACTGTCAT+GGG | 0.504101 | 5.4:-26219992 | MS.gene027495:CDS |
| AGTGACATTAAATCAGAGAA+AGG | 0.512134 | 5.4:-26218018 | MS.gene027495:CDS |
| GGTATAGATCTGAGCGGTAA+TGG | 0.512864 | 5.4:-26219775 | MS.gene027495:CDS |
| ATCAGCTCCAACTAAAACAT+TGG | 0.513745 | 5.4:-26219149 | MS.gene027495:CDS |
| GCGTCTCCAAACAAAATTGA+AGG | 0.515742 | 5.4:-26217844 | MS.gene027495:intron |
| GTAGTATGAGGAACAGGATC+AGG | 0.516205 | 5.4:+26218998 | None:intergenic |
| GTGACATTAAATCAGAGAAA+GGG | 0.517883 | 5.4:-26218017 | MS.gene027495:CDS |
| GAAGGAGATGGAGAGGGAGA+GGG | 0.518011 | 5.4:-26219824 | MS.gene027495:CDS |
| GGATGATTTGAAGGAGGAGG+AGG | 0.520239 | 5.4:-26219620 | MS.gene027495:CDS |
| TAACGCCTGTGAGACTGATT+CGG | 0.522705 | 5.4:-26219740 | MS.gene027495:CDS |
| CAGATCTTCAGTAATAAAGC+AGG | 0.527908 | 5.4:-26218846 | MS.gene027495:intron |
| GTTGAGAAGTGTGCTACACC+TGG | 0.537623 | 5.4:-26219928 | MS.gene027495:CDS |
| TCTCTCATTATGGATAGTAT+GGG | 0.541545 | 5.4:-26218947 | MS.gene027495:CDS |
| CCAAAGTTCATCAGTTGAGG+TGG | 0.544431 | 5.4:-26219575 | MS.gene027495:CDS |
| AGTAACTTGCCTCCTAGGTA+AGG | 0.548527 | 5.4:+26219090 | None:intergenic |
| ATCCTGACAGGCTCCTCCAA+GGG | 0.550707 | 5.4:-26218700 | MS.gene027495:intron |
| CTCTCATTATGGATAGTATG+GGG | 0.551989 | 5.4:-26218946 | MS.gene027495:CDS |
| TGCGGATGATTTGAAGGAGG+AGG | 0.552581 | 5.4:-26219623 | MS.gene027495:CDS |
| TTCTGTATTTCCAACACTCA+AGG | 0.555022 | 5.4:-26219715 | MS.gene027495:CDS |
| GAAATTGAAATCAGCCCGGT+TGG | 0.555960 | 5.4:-26219664 | MS.gene027495:CDS |
| CGAATTGTTGGCTCAAGAGA+AGG | 0.556667 | 5.4:-26219842 | MS.gene027495:CDS |
| AACCAGTTCCTCGTACTATG+AGG | 0.558590 | 5.4:-26218973 | MS.gene027495:CDS |
| GAATTCCGAATCAGTCTCAC+AGG | 0.570594 | 5.4:+26219735 | None:intergenic |
| ATTCACTGTCATGGGAGAGA+TGG | 0.571273 | 5.4:-26219984 | MS.gene027495:CDS |
| TTACCAAAGTTCATCAGTTG+AGG | 0.572684 | 5.4:-26219578 | MS.gene027495:CDS |
| GGAACTGGTTCAGTAGTATG+AGG | 0.573216 | 5.4:+26218986 | None:intergenic |
| ATAAGAAGTTGTTAGGGGTG+TGG | 0.577233 | 5.4:+26216963 | None:intergenic |
| TATCCTGACAGGCTCCTCCA+AGG | 0.579565 | 5.4:-26218701 | MS.gene027495:intron |
| ACCAGTGGCAGCAAAACCTA+AGG | 0.581842 | 5.4:-26219209 | MS.gene027495:CDS |
| TGTGTACAAAGAGACAGAAA+AGG | 0.583777 | 5.4:-26219425 | MS.gene027495:CDS |
| GAGAGGATGGAGAAAAGAAG+TGG | 0.591130 | 5.4:-26218069 | MS.gene027495:CDS |
| TGAGGTGGAGAATAAAGAGG+TGG | 0.606003 | 5.4:-26219560 | MS.gene027495:CDS |
| GATCTGAGCGGTAATGGTAA+CGG | 0.615279 | 5.4:-26219769 | MS.gene027495:CDS |
| GTTGGCTCAAGAGAAGGAGA+TGG | 0.615563 | 5.4:-26219836 | MS.gene027495:CDS |
| CTTTGCGGAAAGAAAATGGA+AGG | 0.615877 | 5.4:-26218647 | MS.gene027495:intron |
| GGTACAACTACCTTGAGTGT+TGG | 0.618926 | 5.4:+26219705 | None:intergenic |
| GAGGCAAGTTACTTCTAGTG+TGG | 0.620877 | 5.4:-26219080 | MS.gene027495:CDS |
| TCAAGAGAAGGAGATGGAGA+GGG | 0.629762 | 5.4:-26219830 | MS.gene027495:CDS |
| CGTTGAAGCTGAAGATGTGA+AGG | 0.632249 | 5.4:-26219461 | MS.gene027495:CDS |
| AGTTGAGGTGGAGAATAAAG+AGG | 0.632776 | 5.4:-26219563 | MS.gene027495:CDS |
| TAAATCAGAGAAAGGGAAAG+CGG | 0.634535 | 5.4:-26218010 | MS.gene027495:intron |
| GCAAGAAATTGAAATCAGCC+CGG | 0.634918 | 5.4:-26219668 | MS.gene027495:CDS |
| ATTACAAGAAGATTGCGGCC+CGG | 0.636848 | 5.4:-26219870 | MS.gene027495:CDS |
| TCCTGACAGGCTCCTCCAAG+GGG | 0.640441 | 5.4:-26218699 | MS.gene027495:intron |
| TCCTGCCGATATCACCAACC+GGG | 0.642989 | 5.4:+26219650 | None:intergenic |
| CAAAACAAAGAAGAAACCAG+TGG | 0.646612 | 5.4:-26219224 | MS.gene027495:CDS |
| GAAATCCGCAGTCCTTACCT+AGG | 0.647614 | 5.4:-26219102 | MS.gene027495:CDS |
| CCCCTAACAACTTCTTATCG+TGG | 0.648364 | 5.4:-26216958 | MS.gene027495:CDS |
| ATCCGCAGTCCTTACCTAGG+AGG | 0.650233 | 5.4:-26219099 | MS.gene027495:CDS |
| AGCTCATTACAAGAAGATTG+CGG | 0.664583 | 5.4:-26219875 | MS.gene027495:CDS |
| CCACGATAAGAAGTTGTTAG+GGG | 0.668169 | 5.4:+26216958 | None:intergenic |
| ATAGGCCTGCTACCGCTGAG+AGG | 0.670892 | 5.4:-26218086 | MS.gene027495:intron |
| GAGGTGGAAAGTGGATCACA+TGG | 0.674354 | 5.4:-26219544 | MS.gene027495:CDS |
| TGATATCGGCAGGAGTCATG+CGG | 0.677640 | 5.4:-26219641 | MS.gene027495:CDS |
| TCTCATTATGGATAGTATGG+GGG | 0.688469 | 5.4:-26218945 | MS.gene027495:CDS |
| CACTCAAGGTAGTTGTACCG+AGG | 0.698782 | 5.4:-26219701 | MS.gene027495:CDS |
| TCATGCGGATGATTTGAAGG+AGG | 0.701389 | 5.4:-26219626 | MS.gene027495:CDS |
| AGAGATTTCCTCATAGTACG+AGG | 0.729557 | 5.4:+26218965 | None:intergenic |
| TGCCTCCTAGGTAAGGACTG+CGG | 0.746167 | 5.4:+26219097 | None:intergenic |
| CCTGACAGGCTCCTCCAAGG+GGG | 0.748791 | 5.4:-26218698 | MS.gene027495:intron |
| AATAATGGTATAGATCTGAG+CGG | 0.762921 | 5.4:-26219781 | MS.gene027495:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATATTTTTGTAATGTTT+CGG | - | chr5.4:26219411-26219430 | MS.gene027495:CDS | 10.0% |
| !!! | ATTAATTTTTTTTTGTGAAT+AGG | - | chr5.4:26218850-26218869 | MS.gene027495:CDS | 10.0% |
| !!! | CATAATGTTAAATTTTTTAA+AGG | - | chr5.4:26217643-26217662 | MS.gene027495:intron | 10.0% |
| !!! | ATGTTAAATTTTTTAAAGGT+TGG | - | chr5.4:26217647-26217666 | MS.gene027495:intron | 15.0% |
| !!! | TGTTAAATTTTTTAAAGGTT+GGG | - | chr5.4:26217648-26217667 | MS.gene027495:intron | 15.0% |
| !! | CAATTTATATATAGATTCCT+TGG | + | chr5.4:26218501-26218520 | None:intergenic | 20.0% |
| !! | CTATAAACTAAATACATGAT+TGG | + | chr5.4:26219848-26219867 | None:intergenic | 20.0% |
| !! | GATGAAAGAAAAAAATAGTT+TGG | + | chr5.4:26219032-26219051 | None:intergenic | 20.0% |
| !!! | CATGTATTTAGTTTATAGAA+GGG | - | chr5.4:26219850-26219869 | MS.gene027495:CDS | 20.0% |
| !!! | GATTTTTTTTAAAATCGACT+TGG | - | chr5.4:26219327-26219346 | MS.gene027495:intron | 20.0% |
| !!! | GTCATTTTAATAGAAAATCA+CGG | + | chr5.4:26219150-26219169 | None:intergenic | 20.0% |
| !!! | TAAGTGTCATTCAATAATAA+CGG | - | chr5.4:26219492-26219511 | MS.gene027495:CDS | 20.0% |
| !!! | TAATGTTTCGGTTTAATTTA+GGG | - | chr5.4:26219423-26219442 | MS.gene027495:CDS | 20.0% |
| !!! | TATTTGATTACCGTTTATTT+TGG | - | chr5.4:26217671-26217690 | MS.gene027495:intron | 20.0% |
| !!! | TCATGTATTTAGTTTATAGA+AGG | - | chr5.4:26219849-26219868 | MS.gene027495:CDS | 20.0% |
| !!! | TCTATTTTGATGAAATTGTA+TGG | - | chr5.4:26218826-26218845 | MS.gene027495:intron | 20.0% |
| !!! | TGATTTTCTATTAAAATGAC+TGG | - | chr5.4:26219150-26219169 | MS.gene027495:CDS | 20.0% |
| !!! | TTTCTAGCTTTATAAATTCA+TGG | + | chr5.4:26219612-26219631 | None:intergenic | 20.0% |
| ! | AATAGATTCTAATGTGAAGT+TGG | - | chr5.4:26219526-26219545 | MS.gene027495:CDS | 25.0% |
| ! | AATGATACTTATTGTGTTTG+GGG | - | chr5.4:26219270-26219289 | MS.gene027495:intron | 25.0% |
| ! | AATGTATTGTACTTCGTAAA+CGG | - | chr5.4:26218610-26218629 | MS.gene027495:intron | 25.0% |
| ! | ACTTCTTCCAAATACTTATT+TGG | + | chr5.4:26217008-26217027 | None:intergenic | 25.0% |
| ! | AGAAGAAAACTACAAATAAG+GGG | + | chr5.4:26219007-26219026 | None:intergenic | 25.0% |
| ! | ATAGATTCTAATGTGAAGTT+GGG | - | chr5.4:26219527-26219546 | MS.gene027495:CDS | 25.0% |
| ! | ATTCTCTCCAAATAAGTATT+TGG | - | chr5.4:26216998-26217017 | MS.gene027495:CDS | 25.0% |
| ! | CAATGATACTTATTGTGTTT+GGG | - | chr5.4:26219269-26219288 | MS.gene027495:intron | 25.0% |
| ! | CAATTCAATACTTAACACAA+TGG | + | chr5.4:26218648-26218667 | None:intergenic | 25.0% |
| ! | CAGAAGAAAACTACAAATAA+GGG | + | chr5.4:26219008-26219027 | None:intergenic | 25.0% |
| ! | GAATTTATAAAGCTAGAAAC+TGG | - | chr5.4:26219613-26219632 | MS.gene027495:CDS | 25.0% |
| ! | GATAACCTATCCAAAATAAA+CGG | + | chr5.4:26217684-26217703 | None:intergenic | 25.0% |
| ! | GTACAATACATTTCATCTAA+AGG | + | chr5.4:26218602-26218621 | None:intergenic | 25.0% |
| ! | TCAATGATACTTATTGTGTT+TGG | - | chr5.4:26219268-26219287 | MS.gene027495:intron | 25.0% |
| ! | TCAGAAGAAAACTACAAATA+AGG | + | chr5.4:26219009-26219028 | None:intergenic | 25.0% |
| ! | TGAAGAAAAAGATGTGAAAT+TGG | - | chr5.4:26217562-26217581 | MS.gene027495:intron | 25.0% |
| ! | TGGAAGGTAAATTATTGAAT+TGG | - | chr5.4:26218323-26218342 | MS.gene027495:intron | 25.0% |
| ! | TTCAGATCAGAAGAAAATAA+TGG | - | chr5.4:26217158-26217177 | MS.gene027495:intron | 25.0% |
| !! | CTTTCAATTTTAAACATCAC+AGG | + | chr5.4:26218981-26219000 | None:intergenic | 25.0% |
| !! | GTAATGTTTCGGTTTAATTT+AGG | - | chr5.4:26219422-26219441 | MS.gene027495:CDS | 25.0% |
| !! | TTTATAGCTTTTGCTTAACA+TGG | - | chr5.4:26219551-26219570 | MS.gene027495:CDS | 25.0% |
| !!! | AAACTACTTTTCATCACTTT+TGG | - | chr5.4:26219709-26219728 | MS.gene027495:CDS | 25.0% |
| !!! | AAGAAGGTTTTTTAATCGTA+TGG | - | chr5.4:26218433-26218452 | MS.gene027495:intron | 25.0% |
| !!! | GAGATGATATTTTGAAAGAT+AGG | - | chr5.4:26219233-26219252 | MS.gene027495:CDS | 25.0% |
| !!! | GGTTTGCTTTATTTCATATT+TGG | - | chr5.4:26217604-26217623 | MS.gene027495:intron | 25.0% |
| !!! | TCTGATTTAATGTCACTTTT+CGG | + | chr5.4:26218933-26218952 | None:intergenic | 25.0% |
| !!! | TGGCACTTTTATTGTTTTAT+AGG | - | chr5.4:26218343-26218362 | MS.gene027495:intron | 25.0% |
| !!! | TTTTTCCTCTATTTTTCTTG+AGG | + | chr5.4:26219064-26219083 | None:intergenic | 25.0% |
| !!! | TTTTTTACATATATCCTGAC+AGG | - | chr5.4:26218242-26218261 | MS.gene027495:intron | 25.0% |
| AAAGCTAAAGCATGATTTCA+AGG | - | chr5.4:26219968-26219987 | MS.gene027495:CDS | 30.0% | |
| AAGCAAACCTTAGATTTCTT+TGG | + | chr5.4:26217593-26217612 | None:intergenic | 30.0% | |
| AATAATGGTATAGATCTGAG+CGG | - | chr5.4:26217173-26217192 | MS.gene027495:intron | 30.0% | |
| AGTGACATTAAATCAGAGAA+AGG | - | chr5.4:26218936-26218955 | MS.gene027495:CDS | 30.0% | |
| ATAACTGCAGTTCATTGTTA+TGG | - | chr5.4:26218150-26218169 | MS.gene027495:intron | 30.0% | |
| ATCTCTCATTATGGATAGTA+TGG | - | chr5.4:26218006-26218025 | MS.gene027495:intron | 30.0% | |
| ATGATACTTATTGTGTTTGG+GGG | - | chr5.4:26219271-26219290 | MS.gene027495:intron | 30.0% | |
| GAAGAAAACTACAAATAAGG+GGG | + | chr5.4:26219006-26219025 | None:intergenic | 30.0% | |
| GGAAAAACCTAATACAAAAG+TGG | - | chr5.4:26219077-26219096 | MS.gene027495:CDS | 30.0% | |
| GTGACATTAAATCAGAGAAA+GGG | - | chr5.4:26218937-26218956 | MS.gene027495:CDS | 30.0% | |
| GTTATGGATGGTGATAAATT+TGG | - | chr5.4:26218166-26218185 | MS.gene027495:intron | 30.0% | |
| TAATAGAAAATCACGGAATG+AGG | + | chr5.4:26219143-26219162 | None:intergenic | 30.0% | |
| TATGAGGAAATCTCTCATTA+TGG | - | chr5.4:26217997-26218016 | MS.gene027495:intron | 30.0% | |
| TCAGTAATAAAGCAGGTAAT+TGG | - | chr5.4:26218115-26218134 | MS.gene027495:intron | 30.0% | |
| TCTCTCATTATGGATAGTAT+GGG | - | chr5.4:26218007-26218026 | MS.gene027495:intron | 30.0% | |
| TCTTAACAACACATTGAAGA+AGG | - | chr5.4:26218417-26218436 | MS.gene027495:intron | 30.0% | |
| TCTTATCATATGCTTTGTCA+AGG | + | chr5.4:26218781-26218800 | None:intergenic | 30.0% | |
| TTTCGTAAAGAACGAATGTT+TGG | + | chr5.4:26219778-26219797 | None:intergenic | 30.0% | |
| ! | ACTTGGTTAAAACTGTGTTT+TGG | - | chr5.4:26219344-26219363 | MS.gene027495:intron | 30.0% |
| ! | CATTATTTTCCCTATTCACA+GGG | + | chr5.4:26217706-26217725 | None:intergenic | 30.0% |
| ! | TGATAATGATTCACTGTCAT+GGG | - | chr5.4:26216962-26216981 | MS.gene027495:CDS | 30.0% |
| !! | AGAGTACCTTCAATTTTGTT+TGG | + | chr5.4:26219119-26219138 | None:intergenic | 30.0% |
| !! | CTTTCTACCACTTTTGTATT+AGG | + | chr5.4:26219087-26219106 | None:intergenic | 30.0% |
| !! | GATATTTTGAAAGATAGGCA+GGG | - | chr5.4:26219238-26219257 | MS.gene027495:CDS | 30.0% |
| !! | TGATATTTTGAAAGATAGGC+AGG | - | chr5.4:26219237-26219256 | MS.gene027495:CDS | 30.0% |
| !! | TTGATAATGATTCACTGTCA+TGG | - | chr5.4:26216961-26216980 | MS.gene027495:CDS | 30.0% |
| !!! | ATTTCCCTTTTTAGTTGAAG+CGG | + | chr5.4:26217837-26217856 | None:intergenic | 30.0% |
| !!! | CTGATTTAATGTCACTTTTC+GGG | + | chr5.4:26218932-26218951 | None:intergenic | 30.0% |
| !!! | GATTACCGTTTATTTTGGAT+AGG | - | chr5.4:26217676-26217695 | MS.gene027495:intron | 30.0% |
| !!! | TGATTTAATGTCACTTTTCG+GGG | + | chr5.4:26218931-26218950 | None:intergenic | 30.0% |
| !!! | TTTTGTTTCTAGCTTCCTTT+TGG | - | chr5.4:26218465-26218484 | MS.gene027495:intron | 30.0% |
| ACAACTTTGCGGAAAGAAAA+TGG | - | chr5.4:26218303-26218322 | MS.gene027495:intron | 35.0% | |
| ACCACGATAAGAAGTTGTTA+GGG | + | chr5.4:26220000-26220019 | None:intergenic | 35.0% | |
| AGCTCATTACAAGAAGATTG+CGG | - | chr5.4:26217079-26217098 | MS.gene027495:intron | 35.0% | |
| AGTTTATAGAAGGGCTGATA+TGG | - | chr5.4:26219859-26219878 | MS.gene027495:CDS | 35.0% | |
| ATAGGTTATCCCTGTGAATA+GGG | - | chr5.4:26217694-26217713 | MS.gene027495:intron | 35.0% | |
| ATATGCTTTGTCAAGGAAAG+AGG | + | chr5.4:26218774-26218793 | None:intergenic | 35.0% | |
| ATCAGCTCCAACTAAAACAT+TGG | - | chr5.4:26217805-26217824 | MS.gene027495:intron | 35.0% | |
| ATTGAACCATACAGTGTGTT+TGG | + | chr5.4:26219683-26219702 | None:intergenic | 35.0% | |
| CAAAACAAAGAAGAAACCAG+TGG | - | chr5.4:26217730-26217749 | MS.gene027495:intron | 35.0% | |
| CAAGTCGCAAATGATATTGT+TGG | + | chr5.4:26218567-26218586 | None:intergenic | 35.0% | |
| CAGATCTTCAGTAATAAAGC+AGG | - | chr5.4:26218108-26218127 | MS.gene027495:intron | 35.0% | |
| CATTTCCTATATTCCTGTGT+TGG | - | chr5.4:26219173-26219192 | MS.gene027495:CDS | 35.0% | |
| CTCTCATTATGGATAGTATG+GGG | - | chr5.4:26218008-26218027 | MS.gene027495:intron | 35.0% | |
| GGAGACATAAAAGTGATTGT+AGG | - | chr5.4:26219444-26219463 | MS.gene027495:CDS | 35.0% | |
| GGATCATCCAAAGAAATCTA+AGG | - | chr5.4:26217583-26217602 | MS.gene027495:intron | 35.0% | |
| GTTTATAGAAGGGCTGATAT+GGG | - | chr5.4:26219860-26219879 | MS.gene027495:CDS | 35.0% | |
| TAAATCAGAGAAAGGGAAAG+CGG | - | chr5.4:26218944-26218963 | MS.gene027495:CDS | 35.0% | |
| TCAGTCCTCAAGAAAAATAG+AGG | - | chr5.4:26219056-26219075 | MS.gene027495:CDS | 35.0% | |
| TCTCATTATGGATAGTATGG+GGG | - | chr5.4:26218009-26218028 | MS.gene027495:intron | 35.0% | |
| TGAAGATCTGTCTTCTTCTA+CGG | + | chr5.4:26218098-26218117 | None:intergenic | 35.0% | |
| TGACTAACATATCTCAACAC+AGG | - | chr5.4:26219923-26219942 | MS.gene027495:CDS | 35.0% | |
| TGTGTACAAAGAGACAGAAA+AGG | - | chr5.4:26217529-26217548 | MS.gene027495:intron | 35.0% | |
| TTACCAAAGTTCATCAGTTG+AGG | - | chr5.4:26217376-26217395 | MS.gene027495:intron | 35.0% | |
| TTCCAACTTCTACAACTTTG+CGG | - | chr5.4:26218292-26218311 | MS.gene027495:intron | 35.0% | |
| TTCTGTATTTCCAACACTCA+AGG | - | chr5.4:26217239-26217258 | MS.gene027495:intron | 35.0% | |
| ! | AAAAGTGATTGTAGGAGCAT+AGG | - | chr5.4:26219452-26219471 | MS.gene027495:CDS | 35.0% |
| ! | AATTGAATCTGCTTGCTAGT+TGG | - | chr5.4:26218728-26218747 | MS.gene027495:intron | 35.0% |
| ! | GCATTATTTTCCCTATTCAC+AGG | + | chr5.4:26217707-26217726 | None:intergenic | 35.0% |
| ! | TCTTCTTCTACGGAAGTTTT+TGG | + | chr5.4:26218088-26218107 | None:intergenic | 35.0% |
| ! | TTGGCTGGTTAAAATTCTTC+TGG | + | chr5.4:26218069-26218088 | None:intergenic | 35.0% |
| ! | TTTATGCACACCTCTTTTTC+AGG | + | chr5.4:26217455-26217474 | None:intergenic | 35.0% |
| !! | ATACATGATTGGTTTCACAG+TGG | + | chr5.4:26219837-26219856 | None:intergenic | 35.0% |
| !! | TAGGAGCATAGGATTGATTT+TGG | - | chr5.4:26219463-26219482 | MS.gene027495:CDS | 35.0% |
| !! | TGGAAGTGTTGTACAAACTT+TGG | - | chr5.4:26218905-26218924 | MS.gene027495:CDS | 35.0% |
| !! | TTGCAAGTGTCTGTTTCTTT+TGG | - | chr5.4:26216933-26216952 | MS.gene027495:CDS | 35.0% |
| !!! | CACTGGTTTCTTCTTTGTTT+TGG | + | chr5.4:26217732-26217751 | None:intergenic | 35.0% |
| AGAGATTTCCTCATAGTACG+AGG | + | chr5.4:26217992-26218011 | None:intergenic | 40.0% | |
| AGTTGAGGTGGAGAATAAAG+AGG | - | chr5.4:26217391-26217410 | MS.gene027495:intron | 40.0% | |
| ATAAGAAGTTGTTAGGGGTG+TGG | + | chr5.4:26219994-26220013 | None:intergenic | 40.0% | |
| ATCAAAAAGTCGCGCAGAAA+AGG | - | chr5.4:26220028-26220047 | MS.gene027495:CDS | 40.0% | |
| CATAGACATGTGCAAAGATC+TGG | + | chr5.4:26217918-26217937 | None:intergenic | 40.0% | |
| CCACGATAAGAAGTTGTTAG+GGG | + | chr5.4:26219999-26220018 | None:intergenic | 40.0% | |
| CGAAATCCAAACACACTGTA+TGG | - | chr5.4:26219674-26219693 | MS.gene027495:CDS | 40.0% | |
| CTAACATATCTCAACACAGG+AGG | - | chr5.4:26219926-26219945 | MS.gene027495:CDS | 40.0% | |
| CTGCAGTTCATTGTTATGGA+TGG | - | chr5.4:26218154-26218173 | MS.gene027495:intron | 40.0% | |
| CTTCTCTTGAGCCAACAATT+CGG | + | chr5.4:26217114-26217133 | None:intergenic | 40.0% | |
| CTTGGTTGAAGTTCTCCAAA+AGG | + | chr5.4:26218483-26218502 | None:intergenic | 40.0% | |
| CTTTGCGGAAAGAAAATGGA+AGG | - | chr5.4:26218307-26218326 | MS.gene027495:intron | 40.0% | |
| GACCACGATAAGAAGTTGTT+AGG | + | chr5.4:26220001-26220020 | None:intergenic | 40.0% | |
| GAGAATAAAGAGGTGGAAAG+TGG | - | chr5.4:26217401-26217420 | MS.gene027495:intron | 40.0% | |
| GATAGACGAACCTGAAAAAG+AGG | - | chr5.4:26217442-26217461 | MS.gene027495:intron | 40.0% | |
| GATAGGTTATCCCTGTGAAT+AGG | - | chr5.4:26217693-26217712 | MS.gene027495:intron | 40.0% | |
| GCAAGAAATTGAAATCAGCC+CGG | - | chr5.4:26217286-26217305 | MS.gene027495:intron | 40.0% | |
| GCGTCTCCAAACAAAATTGA+AGG | - | chr5.4:26219110-26219129 | MS.gene027495:CDS | 40.0% | |
| TATGGATAGTATGGGGGATA+AGG | - | chr5.4:26218015-26218034 | MS.gene027495:CDS | 40.0% | |
| TGAAGCCAACACAGGAATAT+AGG | + | chr5.4:26219181-26219200 | None:intergenic | 40.0% | |
| TTCCGCAAAGTTGTAGAAGT+TGG | + | chr5.4:26218297-26218316 | None:intergenic | 40.0% | |
| TTGCACATGTCTATGAGCTT+AGG | - | chr5.4:26217923-26217942 | MS.gene027495:intron | 40.0% | |
| ! | ATCTGCCGCTTCAACTAAAA+AGG | - | chr5.4:26217829-26217848 | MS.gene027495:intron | 40.0% |
| ! | CTTTTGGTCGAATTGAGGTT+TGG | - | chr5.4:26219725-26219744 | MS.gene027495:CDS | 40.0% |
| ! | GTCGAAATTTGAGATGCCTT+AGG | + | chr5.4:26217764-26217783 | None:intergenic | 40.0% |
| ! | TCTGCCGCTTCAACTAAAAA+GGG | - | chr5.4:26217830-26217849 | MS.gene027495:intron | 40.0% |
| !! | CATCACTTTTGGTCGAATTG+AGG | - | chr5.4:26219720-26219739 | MS.gene027495:CDS | 40.0% |
| !! | CTTTTGGAGAACTTCAACCA+AGG | - | chr5.4:26218481-26218500 | MS.gene027495:intron | 40.0% |
| !! | GATGTAGGCTTTGAACTTCT+CGG | + | chr5.4:26217788-26217807 | None:intergenic | 40.0% |
| !!! | GCAGATGCCAATGTTTTAGT+TGG | + | chr5.4:26217815-26217834 | None:intergenic | 40.0% |
| !!! | GTTTTAGTTGGAGCTGATGT+AGG | + | chr5.4:26217803-26217822 | None:intergenic | 40.0% |
| AACCAGTTCCTCGTACTATG+AGG | - | chr5.4:26217981-26218000 | MS.gene027495:intron | 45.0% | |
| ATTACAAGAAGATTGCGGCC+CGG | - | chr5.4:26217084-26217103 | MS.gene027495:intron | 45.0% | |
| ATTCACTGTCATGGGAGAGA+TGG | - | chr5.4:26216970-26216989 | MS.gene027495:CDS | 45.0% | |
| CACTTAAGTGAAGCCAACAC+AGG | + | chr5.4:26219189-26219208 | None:intergenic | 45.0% | |
| CCAAAGTTCATCAGTTGAGG+TGG | - | chr5.4:26217379-26217398 | MS.gene027495:intron | 45.0% | |
| CCACCTCAACTGATGAACTT+TGG | + | chr5.4:26217382-26217401 | None:intergenic | 45.0% | |
| CCCCTAACAACTTCTTATCG+TGG | - | chr5.4:26219996-26220015 | MS.gene027495:CDS | 45.0% | |
| CGTTGAAGCTGAAGATGTGA+AGG | - | chr5.4:26217493-26217512 | MS.gene027495:intron | 45.0% | |
| CTCAACACAGGAGGAAAAAG+AGG | - | chr5.4:26219935-26219954 | MS.gene027495:CDS | 45.0% | |
| GAAATTGAAATCAGCCCGGT+TGG | - | chr5.4:26217290-26217309 | MS.gene027495:intron | 45.0% | |
| GAATTCCGAATCAGTCTCAC+AGG | + | chr5.4:26217222-26217241 | None:intergenic | 45.0% | |
| GAGAGGATGGAGAAAAGAAG+TGG | - | chr5.4:26218885-26218904 | MS.gene027495:CDS | 45.0% | |
| GAGGCAAGTTACTTCTAGTG+TGG | - | chr5.4:26217874-26217893 | MS.gene027495:CDS | 45.0% | |
| GAGTCATGCGGATGATTTGA+AGG | - | chr5.4:26217325-26217344 | MS.gene027495:intron | 45.0% | |
| GGCTGATATGGGATATGAGT+TGG | - | chr5.4:26219871-26219890 | MS.gene027495:CDS | 45.0% | |
| GGTACAACTACCTTGAGTGT+TGG | + | chr5.4:26217252-26217271 | None:intergenic | 45.0% | |
| GGTATAGATCTGAGCGGTAA+TGG | - | chr5.4:26217179-26217198 | MS.gene027495:intron | 45.0% | |
| GGTTCAGTAGTATGAGGAAC+AGG | + | chr5.4:26217965-26217984 | None:intergenic | 45.0% | |
| GTAGTATGAGGAACAGGATC+AGG | + | chr5.4:26217959-26217978 | None:intergenic | 45.0% | |
| TAACGCCTGTGAGACTGATT+CGG | - | chr5.4:26217214-26217233 | MS.gene027495:intron | 45.0% | |
| TCAAGAGAAGGAGATGGAGA+GGG | - | chr5.4:26217124-26217143 | MS.gene027495:intron | 45.0% | |
| TCATGCGGATGATTTGAAGG+AGG | - | chr5.4:26217328-26217347 | MS.gene027495:intron | 45.0% | |
| TGAGGTGGAGAATAAAGAGG+TGG | - | chr5.4:26217394-26217413 | MS.gene027495:intron | 45.0% | |
| TTCCTCATAGTACGAGGAAC+TGG | + | chr5.4:26217986-26218005 | None:intergenic | 45.0% | |
| TTCTTGCTTATCGCGTTCCT+CGG | + | chr5.4:26217273-26217292 | None:intergenic | 45.0% | |
| ! | AGTAACTTGCCTCCTAGGTA+AGG | + | chr5.4:26217867-26217886 | None:intergenic | 45.0% |
| ! | CTAGAAGTAACTTGCCTCCT+AGG | + | chr5.4:26217872-26217891 | None:intergenic | 45.0% |
| ! | GATCTGAGCGGTAATGGTAA+CGG | - | chr5.4:26217185-26217204 | MS.gene027495:intron | 45.0% |
| ! | GGAACTGGTTCAGTAGTATG+AGG | + | chr5.4:26217971-26217990 | None:intergenic | 45.0% |
| ! | TCTTTTCTCCATCCTCTCAG+CGG | + | chr5.4:26218883-26218902 | None:intergenic | 45.0% |
| ! | TTCTTCTGTGCTACTGATCC+AGG | + | chr5.4:26217047-26217066 | None:intergenic | 45.0% |
| !! | CGAATTGTTGGCTCAAGAGA+AGG | - | chr5.4:26217112-26217131 | MS.gene027495:intron | 45.0% |
| !!! | CTTCTACGGAAGTTTTTGGC+TGG | + | chr5.4:26218084-26218103 | None:intergenic | 45.0% |
| ACCAGTGGCAGCAAAACCTA+AGG | - | chr5.4:26217745-26217764 | MS.gene027495:intron | 50.0% | |
| AGCCAACAATTCGGCTTTCC+GGG | + | chr5.4:26217105-26217124 | None:intergenic | 50.0% | |
| CACTCAAGGTAGTTGTACCG+AGG | - | chr5.4:26217253-26217272 | MS.gene027495:intron | 50.0% | |
| CTCAAGAGAAGGAGATGGAG+AGG | - | chr5.4:26217123-26217142 | MS.gene027495:intron | 50.0% | |
| GAAATCCGCAGTCCTTACCT+AGG | - | chr5.4:26217852-26217871 | MS.gene027495:CDS | 50.0% | |
| GAGCCAACAATTCGGCTTTC+CGG | + | chr5.4:26217106-26217125 | None:intergenic | 50.0% | |
| GAGGTGGAAAGTGGATCACA+TGG | - | chr5.4:26217410-26217429 | MS.gene027495:intron | 50.0% | |
| GGAACAGGATCAGGCTTACT+TGG | + | chr5.4:26217950-26217969 | None:intergenic | 50.0% | |
| GGATGATTTGAAGGAGGAGG+AGG | - | chr5.4:26217334-26217353 | MS.gene027495:intron | 50.0% | |
| TCAGAGAAAGGGAAAGCGGT+AGG | - | chr5.4:26218948-26218967 | MS.gene027495:CDS | 50.0% | |
| TGATATCGGCAGGAGTCATG+CGG | - | chr5.4:26217313-26217332 | MS.gene027495:intron | 50.0% | |
| TGCGGATGATTTGAAGGAGG+AGG | - | chr5.4:26217331-26217350 | MS.gene027495:intron | 50.0% | |
| ! | GTTGAGAAGTGTGCTACACC+TGG | - | chr5.4:26217026-26217045 | MS.gene027495:intron | 50.0% |
| ! | GTTGGCTCAAGAGAAGGAGA+TGG | - | chr5.4:26217118-26217137 | MS.gene027495:intron | 50.0% |
| !! | ATCAGCCCGGTTGGTGATAT+CGG | - | chr5.4:26217299-26217318 | MS.gene027495:intron | 50.0% |
| AGAAGGAGATGGAGAGGGAG+AGG | - | chr5.4:26217129-26217148 | MS.gene027495:intron | 55.0% | |
| ATCCGCAGTCCTTACCTAGG+AGG | - | chr5.4:26217855-26217874 | MS.gene027495:CDS | 55.0% | |
| ATCCTGACAGGCTCCTCCAA+GGG | - | chr5.4:26218254-26218273 | MS.gene027495:intron | 55.0% | |
| CTCCTGCCGATATCACCAAC+CGG | + | chr5.4:26217308-26217327 | None:intergenic | 55.0% | |
| GAAGGAGATGGAGAGGGAGA+GGG | - | chr5.4:26217130-26217149 | MS.gene027495:intron | 55.0% | |
| GAAGGAGGAGGAGGAAGTTG+CGG | - | chr5.4:26217343-26217362 | MS.gene027495:intron | 55.0% | |
| TATCCTGACAGGCTCCTCCA+AGG | - | chr5.4:26218253-26218272 | MS.gene027495:intron | 55.0% | |
| TCCTGCCGATATCACCAACC+GGG | + | chr5.4:26217307-26217326 | None:intergenic | 55.0% | |
| TGCCTCCTAGGTAAGGACTG+CGG | + | chr5.4:26217860-26217879 | None:intergenic | 55.0% | |
| ! | GCCTTAGGTTTTGCTGCCAC+TGG | + | chr5.4:26217749-26217768 | None:intergenic | 55.0% |
| ! | GGAGGAGGAAGTTGCGGTTT+TGG | - | chr5.4:26217349-26217368 | MS.gene027495:intron | 55.0% |
| ATAGGCCTGCTACCGCTGAG+AGG | - | chr5.4:26218868-26218887 | MS.gene027495:CDS | 60.0% | |
| GGCCCGGAAAGCCGAATTGT+TGG | - | chr5.4:26217100-26217119 | MS.gene027495:intron | 60.0% | |
| TCCATCCTCTCAGCGGTAGC+AGG | + | chr5.4:26218876-26218895 | None:intergenic | 60.0% | |
| TCCTGACAGGCTCCTCCAAG+GGG | - | chr5.4:26218255-26218274 | MS.gene027495:intron | 60.0% | |
| ACCTTCGACGCAGTCCCCCT+TGG | + | chr5.4:26218273-26218292 | None:intergenic | 65.0% | |
| CCTGACAGGCTCCTCCAAGG+GGG | - | chr5.4:26218256-26218275 | MS.gene027495:intron | 65.0% | |
| GCCTGCTACCGCTGAGAGGA+TGG | - | chr5.4:26218872-26218891 | MS.gene027495:CDS | 65.0% | |
| TCCAAGGGGGACTGCGTCGA+AGG | - | chr5.4:26218269-26218288 | MS.gene027495:intron | 65.0% | |
| TTCGACGCAGTCCCCCTTGG+AGG | + | chr5.4:26218270-26218289 | None:intergenic | 65.0% | |
| !! | GCCCGGTTGGTGATATCGGC+AGG | - | chr5.4:26217303-26217322 | MS.gene027495:intron | 65.0% |
| CCCCCTTGGAGGAGCCTGTC+AGG | + | chr5.4:26218259-26218278 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 26216903 | 26220073 | 26216903 | ID=MS.gene027495 |
| chr5.4 | mRNA | 26216903 | 26220073 | 26216903 | ID=MS.gene027495.t1;Parent=MS.gene027495 |
| chr5.4 | exon | 26219372 | 26220073 | 26219372 | ID=MS.gene027495.t1.exon1;Parent=MS.gene027495.t1 |
| chr5.4 | CDS | 26219372 | 26220073 | 26219372 | ID=cds.MS.gene027495.t1;Parent=MS.gene027495.t1 |
| chr5.4 | exon | 26218847 | 26219278 | 26218847 | ID=MS.gene027495.t1.exon2;Parent=MS.gene027495.t1 |
| chr5.4 | CDS | 26218847 | 26219278 | 26218847 | ID=cds.MS.gene027495.t1;Parent=MS.gene027495.t1 |
| chr5.4 | exon | 26218648 | 26218712 | 26218648 | ID=MS.gene027495.t1.exon3;Parent=MS.gene027495.t1 |
| chr5.4 | CDS | 26218648 | 26218712 | 26218648 | ID=cds.MS.gene027495.t1;Parent=MS.gene027495.t1 |
| chr5.4 | exon | 26218011 | 26218104 | 26218011 | ID=MS.gene027495.t1.exon4;Parent=MS.gene027495.t1 |
| chr5.4 | CDS | 26218011 | 26218104 | 26218011 | ID=cds.MS.gene027495.t1;Parent=MS.gene027495.t1 |
| chr5.4 | exon | 26217845 | 26217916 | 26217845 | ID=MS.gene027495.t1.exon5;Parent=MS.gene027495.t1 |
| chr5.4 | CDS | 26217845 | 26217916 | 26217845 | ID=cds.MS.gene027495.t1;Parent=MS.gene027495.t1 |
| chr5.4 | exon | 26216903 | 26217031 | 26216903 | ID=MS.gene027495.t1.exon6;Parent=MS.gene027495.t1 |
| chr5.4 | CDS | 26216903 | 26217031 | 26216903 | ID=cds.MS.gene027495.t1;Parent=MS.gene027495.t1 |
| Gene Sequence |
| Protein sequence |
