Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45165.t1 | RHN55186.1 | 84.8 | 512 | 62 | 3 | 1 | 499 | 112 | 620 | 3.60E-188 | 667.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45165.t1 | Q67Y69 | 60.7 | 61 | 24 | 0 | 8 | 68 | 16 | 76 | 2.2e-13 | 78.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45165.t1 | G7K5M5 | 84.8 | 512 | 62 | 3 | 1 | 499 | 1 | 509 | 2.6e-188 | 667.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene45165 | 0.819696 | 1.01E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene45165 | 0.805096 | 1.57E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene45165 | 0.809144 | 2.19E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene45165 | 0.803442 | 3.48E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene45165 | 0.800726 | 1.26E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene45165 | 0.807027 | 6.18E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene45165 | 0.817647 | 2.96E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene45165 | 0.804361 | 2.24E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene45165 | 0.815015 | 1.15E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene45165 | 0.818794 | 1.63E-52 | -1.69E-46 |
| MS.gene056507 | MS.gene45165 | 0.821608 | 3.69E-53 | -1.69E-46 |
| MS.gene057360 | MS.gene45165 | 0.813352 | 2.67E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene45165 | 0.81251 | 4.09E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene45165 | 0.805657 | 1.20E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene45165 | 0.810759 | 9.82E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58579 | MS.gene45165 | PPI |
| MS.gene45165 | MS.gene79013 | PPI |
| MS.gene45165 | MS.gene027495 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45165.t1 | MTR_5g036560 | 91.602 | 512 | 27 | 3 | 1 | 499 | 1 | 509 | 0.0 | 904 |
| MS.gene45165.t1 | MTR_3g086090 | 30.631 | 333 | 184 | 13 | 10 | 316 | 31 | 342 | 5.05e-24 | 106 |
| MS.gene45165.t1 | MTR_3g086090 | 32.389 | 247 | 136 | 10 | 10 | 244 | 31 | 258 | 3.18e-22 | 100 |
| MS.gene45165.t1 | MTR_3g086090 | 32.389 | 247 | 136 | 10 | 10 | 244 | 12 | 239 | 3.94e-22 | 100 |
| MS.gene45165.t1 | MTR_6g022230 | 67.857 | 56 | 18 | 0 | 7 | 62 | 27 | 82 | 5.76e-19 | 90.5 |
| MS.gene45165.t1 | MTR_0117s0080 | 64.151 | 53 | 19 | 0 | 10 | 62 | 35 | 87 | 2.50e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45165.t1 | AT1G70100 | 37.352 | 506 | 211 | 23 | 6 | 457 | 20 | 473 | 3.57e-57 | 197 |
| MS.gene45165.t1 | AT1G70100 | 37.549 | 506 | 210 | 23 | 6 | 457 | 20 | 473 | 6.94e-57 | 197 |
| MS.gene45165.t1 | AT1G70100 | 37.549 | 506 | 210 | 23 | 6 | 457 | 20 | 473 | 6.94e-57 | 197 |
| MS.gene45165.t1 | AT1G70100 | 37.500 | 464 | 193 | 21 | 6 | 415 | 20 | 440 | 1.79e-54 | 190 |
| MS.gene45165.t1 | AT1G70100 | 37.500 | 464 | 193 | 21 | 6 | 415 | 20 | 440 | 1.79e-54 | 190 |
| MS.gene45165.t1 | AT1G70100 | 37.500 | 464 | 193 | 21 | 6 | 415 | 20 | 440 | 1.79e-54 | 190 |
| MS.gene45165.t1 | AT1G24160 | 46.569 | 204 | 88 | 7 | 6 | 209 | 30 | 212 | 5.61e-38 | 146 |
| MS.gene45165.t1 | AT1G24160 | 46.569 | 204 | 88 | 7 | 6 | 209 | 30 | 212 | 5.61e-38 | 146 |
| MS.gene45165.t1 | AT3G26050 | 52.564 | 78 | 37 | 0 | 8 | 85 | 28 | 105 | 1.33e-19 | 92.4 |
| MS.gene45165.t1 | AT3G27350 | 64.516 | 62 | 21 | 1 | 10 | 70 | 30 | 91 | 2.13e-18 | 85.9 |
| MS.gene45165.t1 | AT3G27350 | 64.516 | 62 | 21 | 1 | 10 | 70 | 30 | 91 | 6.61e-18 | 85.1 |
| MS.gene45165.t1 | AT1G70950 | 60.656 | 61 | 24 | 0 | 8 | 68 | 16 | 76 | 3.09e-17 | 84.7 |
| MS.gene45165.t1 | AT5G40700 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 6.86e-17 | 80.9 |
| MS.gene45165.t1 | AT5G40700 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 1.26e-16 | 80.9 |
| MS.gene45165.t1 | AT5G40700 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 1.30e-16 | 80.9 |
| MS.gene45165.t1 | AT1G23060 | 62.295 | 61 | 23 | 0 | 8 | 68 | 16 | 76 | 3.14e-16 | 80.9 |
| MS.gene45165.t1 | AT1G23060 | 62.295 | 61 | 23 | 0 | 8 | 68 | 16 | 76 | 3.14e-16 | 80.9 |
| MS.gene45165.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 1.77e-14 | 74.7 |
| MS.gene45165.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 1.97e-14 | 75.5 |
| MS.gene45165.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 2.24e-14 | 75.5 |
| MS.gene45165.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 2.62e-14 | 75.1 |
| MS.gene45165.t1 | AT3G27350 | 67.347 | 49 | 15 | 1 | 23 | 70 | 3 | 51 | 3.27e-13 | 70.5 |
Find 111 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCTTCCAAATACTTATT+TGG | 0.140230 | 5.1:+27158696 | None:intergenic |
| CACTGGTTTCTTCTTTGTTT+TGG | 0.160966 | 5.1:+27157972 | None:intergenic |
| ATTCTCTCCAAATAAGTATT+TGG | 0.192425 | 5.1:-27158703 | MS.gene45165:CDS |
| ATCTGCCGCTTCAACTAAAA+AGG | 0.192462 | 5.1:-27157872 | MS.gene45165:CDS |
| ATCTCTCATTATGGATAGTA+TGG | 0.195712 | 5.1:-27157695 | MS.gene45165:CDS |
| TCAACTTTGCGGAAAGAAAA+TGG | 0.242699 | 5.1:-27157397 | MS.gene45165:CDS |
| GAGCCAACAATTCGGCTTTC+CGG | 0.260429 | 5.1:+27158598 | None:intergenic |
| GGAGGAGGAAGTTGCGGTTT+TGG | 0.263005 | 5.1:-27158352 | MS.gene45165:CDS |
| AGCCAACAATTCGGCTTTCC+GGG | 0.287622 | 5.1:+27158599 | None:intergenic |
| TTGGCTGGTTAAAATTCTTC+TGG | 0.301994 | 5.1:+27157635 | None:intergenic |
| TATGAGGAAATCTCTCATTA+TGG | 0.319055 | 5.1:-27157704 | MS.gene45165:CDS |
| GATAGGTTATCCCTGTGAAT+AGG | 0.335244 | 5.1:-27158008 | MS.gene45165:intron |
| TTGCAAGTGTCTGTTTCTTT+TGG | 0.337585 | 5.1:-27158768 | MS.gene45165:CDS |
| ATCAGCCCGGTTGGTGATAT+CGG | 0.358999 | 5.1:-27158402 | MS.gene45165:CDS |
| TTCTTCTGTGCTACTGATCC+AGG | 0.363303 | 5.1:+27158657 | None:intergenic |
| TTCAGATCAGAAGAAAATAA+TGG | 0.389148 | 5.1:-27158543 | MS.gene45165:CDS |
| AAGCAAACCTTAGATTTCTC+TGG | 0.396471 | 5.1:+27158111 | None:intergenic |
| TTCCAACTTCTTCAACTTTG+CGG | 0.397164 | 5.1:-27157408 | MS.gene45165:CDS |
| GGATCATCCAGAGAAATCTA+AGG | 0.403158 | 5.1:-27158118 | MS.gene45165:intron |
| CTAGAAGTAACTTGCCTCCT+AGG | 0.410045 | 5.1:+27157832 | None:intergenic |
| TTCCGCAAAGTTGAAGAAGT+TGG | 0.411188 | 5.1:+27157406 | None:intergenic |
| GGAACTGGATCAGGCTTACT+TGG | 0.415359 | 5.1:+27157754 | None:intergenic |
| TTCTTGCTTATCGCGTTCCT+CGG | 0.421641 | 5.1:+27158431 | None:intergenic |
| ATAGGTTATCCCTGTGAATA+GGG | 0.434793 | 5.1:-27158007 | MS.gene45165:intron |
| ATCCTGGACAGGCTCCTTCA+AGG | 0.441961 | 5.1:-27157447 | MS.gene45165:intron |
| AAAGCTAAAGCATGATTTCA+AGG | 0.446740 | 5.1:-27155339 | MS.gene45165:CDS |
| CTCCTGCCGATATCACCAAC+CGG | 0.447622 | 5.1:+27158396 | None:intergenic |
| CTTCTCTTGAGCCAACAATT+CGG | 0.451413 | 5.1:+27158590 | None:intergenic |
| TTGCACATGTCTATGAGCTT+AGG | 0.451785 | 5.1:-27157778 | MS.gene45165:CDS |
| AGAAGGAGATGGAGAGGGAG+AGG | 0.454029 | 5.1:-27158572 | MS.gene45165:CDS |
| GATGTAGGCTTTGAACTTCT+CGG | 0.454715 | 5.1:+27157916 | None:intergenic |
| GGTTCAGTAGTATGAGGAAC+TGG | 0.457148 | 5.1:+27157739 | None:intergenic |
| GGCCCGGAAAGCCGAATTGT+TGG | 0.460858 | 5.1:-27158601 | MS.gene45165:CDS |
| CATAGACATGTGCAAAGATC+TGG | 0.461378 | 5.1:+27157786 | None:intergenic |
| CCACCTCAACTGATGAACTT+TGG | 0.468288 | 5.1:+27158322 | None:intergenic |
| TTCCTCATAGTACAAGGAAC+TGG | 0.469604 | 5.1:+27157718 | None:intergenic |
| CTCAAGAGAAGGAGATGGAG+AGG | 0.471982 | 5.1:-27158578 | MS.gene45165:CDS |
| TCCTGGACAGGCTCCTTCAA+GGG | 0.472318 | 5.1:-27157446 | MS.gene45165:intron |
| TCCATCCTCTCAACGGTAGC+AGG | 0.474386 | 5.1:+27156414 | None:intergenic |
| GAGAATAAAGAGGTGGAAAG+TGG | 0.486653 | 5.1:-27158300 | MS.gene45165:CDS |
| GAGTCATGCGGATGATTTGA+AGG | 0.487910 | 5.1:-27158376 | MS.gene45165:CDS |
| TGGAAGTGTTGTACGAACTT+TGG | 0.489754 | 5.1:-27156382 | MS.gene45165:CDS |
| GTCGAAATTTGAGATGCCTT+AGG | 0.493805 | 5.1:+27157940 | None:intergenic |
| GCCCGGTTGGTGATATCGGC+AGG | 0.496567 | 5.1:-27158398 | MS.gene45165:CDS |
| TTGATAATGATTCACTGTCA+TGG | 0.498358 | 5.1:-27158740 | MS.gene45165:CDS |
| GCCTGCTACCGTTGAGAGGA+TGG | 0.498871 | 5.1:-27156415 | MS.gene45165:CDS |
| GAAGGAGGAGGAGGAAGTTG+CGG | 0.503678 | 5.1:-27158358 | MS.gene45165:CDS |
| TGATAATGATTCACTGTCAT+GGG | 0.504101 | 5.1:-27158739 | MS.gene45165:CDS |
| GTAGTATGAGGAACTGGATC+AGG | 0.506674 | 5.1:+27157745 | None:intergenic |
| AGTGACATTAAATCAGAGAA+AGG | 0.512134 | 5.1:-27156351 | MS.gene45165:CDS |
| GGTATAGATCTGAGCGGTAA+TGG | 0.512864 | 5.1:-27158522 | MS.gene45165:CDS |
| ATCAGCTCCAACTAAAACAT+TGG | 0.513745 | 5.1:-27157896 | MS.gene45165:CDS |
| ACCACGATAAGAAGTTGGTA+GGG | 0.513841 | 5.1:+27155310 | None:intergenic |
| GCGTCTCCAAACAAAATTGA+AGG | 0.515742 | 5.1:-27156176 | MS.gene45165:intron |
| GTGACATTAAATCAGAGAAA+GGG | 0.517883 | 5.1:-27156350 | MS.gene45165:CDS |
| GAAGGAGATGGAGAGGGAGA+GGG | 0.518011 | 5.1:-27158571 | MS.gene45165:CDS |
| GGATGATTTGAAGGAGGAGG+AGG | 0.520239 | 5.1:-27158367 | MS.gene45165:CDS |
| CGTTGAAGAAGACAGATCTT+CGG | 0.520469 | 5.1:-27157605 | MS.gene45165:CDS |
| TAACGCCTGTGAGACTGATT+CGG | 0.522705 | 5.1:-27158487 | MS.gene45165:CDS |
| CAGATCTTCGGTAAAACAGC+AGG | 0.523931 | 5.1:-27157593 | MS.gene45165:intron |
| TCCATCTGTGCAGCTATCGA+CGG | 0.533060 | 5.1:+27153885 | None:intergenic |
| CGAAGATCTGTCTTCTTCAA+CGG | 0.533181 | 5.1:+27157606 | None:intergenic |
| GTTGAGAAGTGTGCTACACC+TGG | 0.537623 | 5.1:-27158675 | MS.gene45165:CDS |
| TCTCTCATTATGGATAGTAT+GGG | 0.541545 | 5.1:-27157694 | MS.gene45165:CDS |
| CCAAAGTTCATCAGTTGAGG+TGG | 0.544431 | 5.1:-27158322 | MS.gene45165:CDS |
| AGTAACTTGCCTCCTAGGTA+AGG | 0.548527 | 5.1:+27157837 | None:intergenic |
| AACCAGTTCCTTGTACTATG+AGG | 0.551564 | 5.1:-27157720 | MS.gene45165:CDS |
| CTCTCATTATGGATAGTATG+GGG | 0.551989 | 5.1:-27157693 | MS.gene45165:CDS |
| TGCGGATGATTTGAAGGAGG+AGG | 0.552581 | 5.1:-27158370 | MS.gene45165:CDS |
| TTCTGTATTTCCAACACTCA+AGG | 0.555022 | 5.1:-27158462 | MS.gene45165:CDS |
| GAAATTGAAATCAGCCCGGT+TGG | 0.555960 | 5.1:-27158411 | MS.gene45165:CDS |
| CGAATTGTTGGCTCAAGAGA+AGG | 0.556667 | 5.1:-27158589 | MS.gene45165:CDS |
| GGAACTGGTTCAGTAGTATG+AGG | 0.564881 | 5.1:+27157733 | None:intergenic |
| GACCACGATAAGAAGTTGGT+AGG | 0.566421 | 5.1:+27155309 | None:intergenic |
| GAATTCCGAATCAGTCTCAC+AGG | 0.570594 | 5.1:+27158482 | None:intergenic |
| ATTCACTGTCATGGGAGAGA+TGG | 0.571273 | 5.1:-27158731 | MS.gene45165:CDS |
| TTACCAAAGTTCATCAGTTG+AGG | 0.572684 | 5.1:-27158325 | MS.gene45165:CDS |
| GAGAGGATGGAGAAAAGAAG+TGG | 0.572851 | 5.1:-27156402 | MS.gene45165:CDS |
| ACCAGTGGCAGCAAAACCTA+AGG | 0.581842 | 5.1:-27157956 | MS.gene45165:CDS |
| TGTGTACAAAGAGACAGAAA+AGG | 0.583777 | 5.1:-27158172 | MS.gene45165:CDS |
| ATAAGAAGTTGGTAGGGGTG+TGG | 0.595000 | 5.1:+27155316 | None:intergenic |
| AGAGATTTCCTCATAGTACA+AGG | 0.604826 | 5.1:+27157712 | None:intergenic |
| TGAGGTGGAGAATAAAGAGG+TGG | 0.606003 | 5.1:-27158307 | MS.gene45165:CDS |
| CTTTGCGGAAAGAAAATGGA+AGG | 0.609059 | 5.1:-27157393 | MS.gene45165:intron |
| GATCTGAGCGGTAATGGTAA+CGG | 0.615279 | 5.1:-27158516 | MS.gene45165:CDS |
| GTTGGCTCAAGAGAAGGAGA+TGG | 0.615563 | 5.1:-27158583 | MS.gene45165:CDS |
| GGTACAACTACCTTGAGTGT+TGG | 0.618926 | 5.1:+27158452 | None:intergenic |
| GAGGCAAGTTACTTCTAGTG+TGG | 0.620877 | 5.1:-27157827 | MS.gene45165:CDS |
| CCTGGACAGGCTCCTTCAAG+GGG | 0.624436 | 5.1:-27157445 | MS.gene45165:intron |
| CCACGATAAGAAGTTGGTAG+GGG | 0.628287 | 5.1:+27155311 | None:intergenic |
| TCAAGAGAAGGAGATGGAGA+GGG | 0.629762 | 5.1:-27158577 | MS.gene45165:CDS |
| CGTTGAAGCTGAAGATGTGA+AGG | 0.632249 | 5.1:-27158208 | MS.gene45165:CDS |
| AGTTGAGGTGGAGAATAAAG+AGG | 0.632776 | 5.1:-27158310 | MS.gene45165:CDS |
| TAAATCAGAGAAAGGGAAAG+CGG | 0.634535 | 5.1:-27156343 | MS.gene45165:intron |
| GCAAGAAATTGAAATCAGCC+CGG | 0.634918 | 5.1:-27158415 | MS.gene45165:CDS |
| ATTACAAGAAGATTGCGGCC+CGG | 0.636848 | 5.1:-27158617 | MS.gene45165:CDS |
| ATAGGCCTGCTACCGTTGAG+AGG | 0.639643 | 5.1:-27156419 | MS.gene45165:intron |
| TCCTGCCGATATCACCAACC+GGG | 0.642989 | 5.1:+27158397 | None:intergenic |
| CAAAACAAAGAAGAAACCAG+TGG | 0.646612 | 5.1:-27157971 | MS.gene45165:CDS |
| GAAATCCGCAGTCCTTACCT+AGG | 0.647614 | 5.1:-27157849 | MS.gene45165:CDS |
| ATCCGCAGTCCTTACCTAGG+AGG | 0.650233 | 5.1:-27157846 | MS.gene45165:CDS |
| CCCCTACCAACTTCTTATCG+TGG | 0.650660 | 5.1:-27155311 | MS.gene45165:CDS |
| AGCTCATTACAAGAAGATTG+CGG | 0.664583 | 5.1:-27158622 | MS.gene45165:CDS |
| GAGGTGGAAAGTGGATCACA+TGG | 0.674354 | 5.1:-27158291 | MS.gene45165:CDS |
| TGATATCGGCAGGAGTCATG+CGG | 0.677640 | 5.1:-27158388 | MS.gene45165:CDS |
| TCTCATTATGGATAGTATGG+GGG | 0.688469 | 5.1:-27157692 | MS.gene45165:CDS |
| CACTCAAGGTAGTTGTACCG+AGG | 0.698782 | 5.1:-27158448 | MS.gene45165:CDS |
| TCATGCGGATGATTTGAAGG+AGG | 0.701389 | 5.1:-27158373 | MS.gene45165:CDS |
| CTGGACAGGCTCCTTCAAGG+GGG | 0.743728 | 5.1:-27157444 | MS.gene45165:intron |
| TGCCTCCTAGGTAAGGACTG+CGG | 0.746167 | 5.1:+27157844 | None:intergenic |
| AATAATGGTATAGATCTGAG+CGG | 0.762921 | 5.1:-27158528 | MS.gene45165:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTAATAAAATATTTCTTTT+CGG | - | chr5.1:27158350-27158369 | MS.gene45165:CDS | 10.0% |
| !!! | CATAATGTTAAATTTTTTAA+AGG | - | chr5.1:27154638-27154657 | MS.gene45165:intron | 10.0% |
| !! | TTTACATAATGAACATTATT+TGG | + | chr5.1:27158490-27158509 | None:intergenic | 15.0% |
| !!! | AGAGTTTGTAAATTTAATTT+TGG | + | chr5.1:27158592-27158611 | None:intergenic | 15.0% |
| !!! | ATAAAACTTTTTGTAATGTT+TGG | - | chr5.1:27156826-27156845 | MS.gene45165:intron | 15.0% |
| !!! | ATACCAAAAAGTTATTTTTA+AGG | + | chr5.1:27157534-27157553 | None:intergenic | 15.0% |
| !!! | TAAAACTTTTTGTAATGTTT+GGG | - | chr5.1:27156827-27156846 | MS.gene45165:intron | 15.0% |
| !!! | TGATTTTTTTAAAATCGATT+TGG | - | chr5.1:27156739-27156758 | MS.gene45165:intron | 15.0% |
| !!! | TTTGTATATAAGTTGAATTT+AGG | + | chr5.1:27158637-27158656 | None:intergenic | 15.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | - | chr5.1:27155443-27155462 | MS.gene45165:intron | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | + | chr5.1:27155462-27155443 | None:intergenic | 20.0% |
| !! | AATAAGATATTGTCAATATG+AGG | + | chr5.1:27158399-27158418 | None:intergenic | 20.0% |
| !! | AATGCAACTTATTAAGTAAA+AGG | + | chr5.1:27158081-27158100 | None:intergenic | 20.0% |
| !! | AGAACATTATTTAGATTGTT+TGG | + | chr5.1:27158035-27158054 | None:intergenic | 20.0% |
| !! | ATAAGATATTGTCAATATGA+GGG | + | chr5.1:27158398-27158417 | None:intergenic | 20.0% |
| !! | ATTATAATACCCTAAAAAAG+GGG | - | chr5.1:27157824-27157843 | MS.gene45165:CDS | 20.0% |
| !! | ATTATCAATTGTTAAACACA+AGG | + | chr5.1:27157641-27157660 | None:intergenic | 20.0% |
| !! | ATTCATAAATAATTTCCAAG+AGG | + | chr5.1:27156259-27156278 | None:intergenic | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | - | chr5.1:27155649-27155668 | MS.gene45165:intron | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | + | chr5.1:27155668-27155649 | None:intergenic | 20.0% |
| !! | CAATTTATATATAGATTCCT+TGG | + | chr5.1:27155843-27155862 | None:intergenic | 20.0% |
| !! | CTTGGAAATTATTTATGAAT+AGG | - | chr5.1:27156259-27156278 | MS.gene45165:intron | 20.0% |
| !! | GAAATTTATAAGCAAAAACT+AGG | + | chr5.1:27155725-27155744 | None:intergenic | 20.0% |
| !! | GATTATAATACCCTAAAAAA+GGG | - | chr5.1:27157823-27157842 | MS.gene45165:CDS | 20.0% |
| !! | GTTATATATGGTGATAAATT+TGG | - | chr5.1:27155161-27155180 | MS.gene45165:intron | 20.0% |
| !! | TCAACTTATATACAAAATCA+AGG | - | chr5.1:27158641-27158660 | MS.gene45165:CDS | 20.0% |
| !! | TTAACAAATATTACATATCC+AGG | - | chr5.1:27158422-27158441 | MS.gene45165:CDS | 20.0% |
| !! | TTCAATTCAATACTTAACAA+TGG | + | chr5.1:27156098-27156117 | None:intergenic | 20.0% |
| !! | TTCATAAATAATTTCCAAGA+GGG | + | chr5.1:27156258-27156277 | None:intergenic | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | - | chr5.1:27155650-27155669 | MS.gene45165:intron | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | + | chr5.1:27155669-27155650 | None:intergenic | 20.0% |
| !!! | ATGATTTTTTACATATATCC+TGG | - | chr5.1:27155233-27155252 | MS.gene45165:intron | 20.0% |
| !!! | ATTTAATTTTGGTTGAACTT+TGG | + | chr5.1:27158581-27158600 | None:intergenic | 20.0% |
| !!! | CAACCTTAAAAATAACTTTT+TGG | - | chr5.1:27157528-27157547 | MS.gene45165:intron | 20.0% |
| !!! | TATTTGATTACCGTTTATTT+TGG | - | chr5.1:27154666-27154685 | MS.gene45165:intron | 20.0% |
| !!! | TCTATTTTGATGAAATTGTA+TGG | - | chr5.1:27156209-27156228 | MS.gene45165:CDS | 20.0% |
| !!! | TGGCATTTTTATTGTTTTAT+AGG | - | chr5.1:27155339-27155358 | MS.gene45165:CDS | 20.0% |
| !!! | TGTGTTTAACAATTGATAAT+TGG | - | chr5.1:27157641-27157660 | MS.gene45165:CDS | 20.0% |
| !!! | TTTTACTTAATAAGTTGCAT+TGG | - | chr5.1:27158080-27158099 | MS.gene45165:intron | 20.0% |
| !!! | TTTTTCATCTATTTTTCTTG+AGG | + | chr5.1:27156474-27156493 | None:intergenic | 20.0% |
| ! | AATGATACTTATTGTGTGTT+TGG | - | chr5.1:27156681-27156700 | MS.gene45165:intron | 25.0% |
| ! | AATGTATTGTACTTCGTAAA+CGG | - | chr5.1:27155952-27155971 | MS.gene45165:intron | 25.0% |
| ! | ACATTATGATAACAAGATTG+TGG | + | chr5.1:27158328-27158347 | None:intergenic | 25.0% |
| ! | ACTTCTTCCAAATACTTATT+TGG | + | chr5.1:27154003-27154022 | None:intergenic | 25.0% |
| ! | ATGATACTTATTGTGTGTTT+GGG | - | chr5.1:27156682-27156701 | MS.gene45165:intron | 25.0% |
| ! | ATTATTGAGTGAAATTCATG+CGG | + | chr5.1:27158150-27158169 | None:intergenic | 25.0% |
| ! | ATTCTCTCCAAATAAGTATT+TGG | - | chr5.1:27153993-27154012 | MS.gene45165:intron | 25.0% |
| ! | CAACTTATTAAGTAAAAGGA+GGG | + | chr5.1:27158077-27158096 | None:intergenic | 25.0% |
| ! | GATAACCTATCCAAAATAAA+CGG | + | chr5.1:27154679-27154698 | None:intergenic | 25.0% |
| ! | GGATTATAATACCCTAAAAA+AGG | - | chr5.1:27157822-27157841 | MS.gene45165:CDS | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | - | chr5.1:27155681-27155700 | MS.gene45165:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | + | chr5.1:27155700-27155681 | None:intergenic | 25.0% |
| ! | GTACAATACATTTCATCTAA+AGG | + | chr5.1:27155944-27155963 | None:intergenic | 25.0% |
| ! | TACAGTTTAACAGTATTTCT+AGG | - | chr5.1:27157801-27157820 | MS.gene45165:CDS | 25.0% |
| ! | TCATTTCAAGAGAAAAATCA+TGG | + | chr5.1:27156560-27156579 | None:intergenic | 25.0% |
| ! | TGAAAAACCTAATACAAAAG+TGG | - | chr5.1:27156487-27156506 | MS.gene45165:intron | 25.0% |
| ! | TGAAGAAAAAGATGTGAAAT+TGG | - | chr5.1:27154557-27154576 | MS.gene45165:intron | 25.0% |
| ! | TGGAAGGTAAATTATTGAAT+TGG | - | chr5.1:27155319-27155338 | MS.gene45165:CDS | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | - | chr5.1:27155680-27155699 | MS.gene45165:intron | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | + | chr5.1:27155699-27155680 | None:intergenic | 25.0% |
| ! | TTAATAATGTTGCGTCTAAA+AGG | - | chr5.1:27158445-27158464 | MS.gene45165:CDS | 25.0% |
| ! | TTCAGATCAGAAGAAAATAA+TGG | - | chr5.1:27154153-27154172 | MS.gene45165:intron | 25.0% |
| ! | TTTCATCATCAACTTTAGTA+TGG | + | chr5.1:27157772-27157791 | None:intergenic | 25.0% |
| ! | TTTGGGCTTAATTAATGATT+TGG | - | chr5.1:27155383-27155402 | MS.gene45165:intron | 25.0% |
| !! | AAAATATTTCTTTTCGGCAA+AGG | - | chr5.1:27158356-27158375 | MS.gene45165:CDS | 25.0% |
| !! | AACAATTGATAATTGGAGTT+TGG | - | chr5.1:27157648-27157667 | MS.gene45165:CDS | 25.0% |
| !! | ATAAAAGCATAGGTTGAATA+TGG | - | chr5.1:27158244-27158263 | MS.gene45165:CDS | 25.0% |
| !! | GAAAAGTTATATGTTGCTTA+AGG | - | chr5.1:27157495-27157514 | MS.gene45165:intron | 25.0% |
| !! | GTGAAAATTTTCATACAAGA+GGG | - | chr5.1:27157864-27157883 | MS.gene45165:CDS | 25.0% |
| !! | TAATGTTTGGGTTTGATTTA+GGG | - | chr5.1:27156839-27156858 | MS.gene45165:intron | 25.0% |
| !! | TGTGAAAATTTTCATACAAG+AGG | - | chr5.1:27157863-27157882 | MS.gene45165:CDS | 25.0% |
| !!! | AAACTACTTTTCATCACTTT+TGG | - | chr5.1:27157174-27157193 | MS.gene45165:intron | 25.0% |
| !!! | AAGAAGGTTTTTTAATCGTA+TGG | - | chr5.1:27155775-27155794 | MS.gene45165:intron | 25.0% |
| !!! | ATGTTTCATGTACTAGTTTT+TGG | - | chr5.1:27155365-27155384 | MS.gene45165:CDS | 25.0% |
| !!! | GGTTTGCTTTATTTCATATT+TGG | - | chr5.1:27154599-27154618 | MS.gene45165:intron | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | - | chr5.1:27155414-27155433 | MS.gene45165:intron | 25.0% |
| !!! | TCTGATTTAATGTCACTTTT+CGG | + | chr5.1:27156342-27156361 | None:intergenic | 25.0% |
| !!! | TGCATTGGTCTTATTAATTA+AGG | - | chr5.1:27158095-27158114 | MS.gene45165:intron | 25.0% |
| !!! | TGTTTCATGTACTAGTTTTT+GGG | - | chr5.1:27155366-27155385 | MS.gene45165:intron | 25.0% |
| AAAGCTAAAGCATGATTTCA+AGG | - | chr5.1:27157357-27157376 | MS.gene45165:intron | 30.0% | |
| AATAATGGTATAGATCTGAG+CGG | - | chr5.1:27154168-27154187 | MS.gene45165:intron | 30.0% | |
| ACTAGGCTTAATTAATGATG+TGG | + | chr5.1:27155708-27155727 | None:intergenic | 30.0% | |
| AGAAAAGAGATAAAAACTGG+TGG | + | chr5.1:27157932-27157951 | None:intergenic | 30.0% | |
| AGACGAAAACTACAAATAAG+GGG | + | chr5.1:27156416-27156435 | None:intergenic | 30.0% | |
| AGTGACATTAAATCAGAGAA+AGG | - | chr5.1:27156345-27156364 | MS.gene45165:CDS | 30.0% | |
| ATCTCTCATTATGGATAGTA+TGG | - | chr5.1:27155001-27155020 | MS.gene45165:intron | 30.0% | |
| ATTGAACCATAAAGTGTGTT+TGG | + | chr5.1:27157101-27157120 | None:intergenic | 30.0% | |
| CAAAATCCAAACACACTTTA+TGG | - | chr5.1:27157092-27157111 | MS.gene45165:intron | 30.0% | |
| CAGACGAAAACTACAAATAA+GGG | + | chr5.1:27156417-27156436 | None:intergenic | 30.0% | |
| CTCAGAAAAGAGATAAAAAC+TGG | + | chr5.1:27157935-27157954 | None:intergenic | 30.0% | |
| CTGCAGTTCATTGTTATATA+TGG | - | chr5.1:27155149-27155168 | MS.gene45165:intron | 30.0% | |
| GAAAAGAGATAAAAACTGGT+GGG | + | chr5.1:27157931-27157950 | None:intergenic | 30.0% | |
| GCAACTTATTAAGTAAAAGG+AGG | + | chr5.1:27158078-27158097 | None:intergenic | 30.0% | |
| GCTAACAGATACTAACTTAA+GGG | + | chr5.1:27155470-27155489 | None:intergenic | 30.0% | |
| GTGAAAGAAAGAACATAGTT+TGG | + | chr5.1:27156441-27156460 | None:intergenic | 30.0% | |
| GTGACATTAAATCAGAGAAA+GGG | - | chr5.1:27156346-27156365 | MS.gene45165:CDS | 30.0% | |
| TATGAGGAAATCTCTCATTA+TGG | - | chr5.1:27154992-27155011 | MS.gene45165:intron | 30.0% | |
| TCAGACGAAAACTACAAATA+AGG | + | chr5.1:27156418-27156437 | None:intergenic | 30.0% | |
| TCTCTCATTATGGATAGTAT+GGG | - | chr5.1:27155002-27155021 | MS.gene45165:intron | 30.0% | |
| TCTTAACAACACATTGAAGA+AGG | - | chr5.1:27155759-27155778 | MS.gene45165:intron | 30.0% | |
| TCTTATCATATGCTTTGTCA+AGG | + | chr5.1:27156164-27156183 | None:intergenic | 30.0% | |
| TGATACTTATTGTGTGTTTG+GGG | - | chr5.1:27156683-27156702 | MS.gene45165:intron | 30.0% | |
| TGGTGATAGTAATCAAGTTA+GGG | - | chr5.1:27157668-27157687 | MS.gene45165:CDS | 30.0% | |
| TTACTAACATATCTCAACAC+AGG | - | chr5.1:27157312-27157331 | MS.gene45165:intron | 30.0% | |
| TTATTGAGTGAAATTCATGC+GGG | + | chr5.1:27158149-27158168 | None:intergenic | 30.0% | |
| TTGACGAAAGATGACTTAAA+GGG | - | chr5.1:27155621-27155640 | MS.gene45165:intron | 30.0% | |
| TTTCGTAAAGAACGAATGTT+TGG | + | chr5.1:27157243-27157262 | None:intergenic | 30.0% | |
| ! | CATTATTTTCCCTATTCACA+GGG | + | chr5.1:27154701-27154720 | None:intergenic | 30.0% |
| ! | CTATCACTGAATAAAAGCAT+AGG | - | chr5.1:27158234-27158253 | MS.gene45165:CDS | 30.0% |
| ! | CTTTTGCCAAAACGTTAAAT+AGG | - | chr5.1:27155512-27155531 | MS.gene45165:intron | 30.0% |
| ! | GTAATGTTTGGGTTTGATTT+AGG | - | chr5.1:27156838-27156857 | MS.gene45165:intron | 30.0% |
| ! | TGATAATGATTCACTGTCAT+GGG | - | chr5.1:27153957-27153976 | MS.gene45165:intron | 30.0% |
| ! | TTAGAGCTTTTACTTAACAG+TGG | - | chr5.1:27156969-27156988 | MS.gene45165:intron | 30.0% |
| ! | TTGGTGATAGTAATCAAGTT+AGG | - | chr5.1:27157667-27157686 | MS.gene45165:CDS | 30.0% |
| ! | TTTTCGTAGCAAGAACATTA+TGG | + | chr5.1:27156072-27156091 | None:intergenic | 30.0% |
| ! | TTTTTACATATATCCTGGAC+AGG | - | chr5.1:27155238-27155257 | MS.gene45165:intron | 30.0% |
| ! | TTTTTCTTGAGGACTGATAT+AGG | + | chr5.1:27156463-27156482 | None:intergenic | 30.0% |
| !! | AGAGTACCTTCAATTTTGTT+TGG | + | chr5.1:27156529-27156548 | None:intergenic | 30.0% |
| !! | ATACAAAATCAAGGTGTTGT+TGG | - | chr5.1:27158650-27158669 | MS.gene45165:CDS | 30.0% |
| !! | CTTTCTACCACTTTTGTATT+AGG | + | chr5.1:27156497-27156516 | None:intergenic | 30.0% |
| !! | GCTATTTTGAAAGATAGGTA+GGG | - | chr5.1:27156649-27156668 | MS.gene45165:intron | 30.0% |
| !! | GGTCTTATTAATTAAGGAGT+GGG | - | chr5.1:27158101-27158120 | MS.gene45165:intron | 30.0% |
| !! | TGGTCTTATTAATTAAGGAG+TGG | - | chr5.1:27158100-27158119 | MS.gene45165:intron | 30.0% |
| !! | TTGATAATGATTCACTGTCA+TGG | - | chr5.1:27153956-27153975 | MS.gene45165:intron | 30.0% |
| !! | TTTCTGGCTTTGTAAATTCA+TGG | + | chr5.1:27157030-27157049 | None:intergenic | 30.0% |
| !!! | AGAGTGAGTTGATTGATTTT+TGG | + | chr5.1:27158535-27158554 | None:intergenic | 30.0% |
| !!! | ATTTCCCTTTTTAGTTGAAG+CGG | + | chr5.1:27154832-27154851 | None:intergenic | 30.0% |
| !!! | CTGATTTAATGTCACTTTTC+GGG | + | chr5.1:27156341-27156360 | None:intergenic | 30.0% |
| !!! | GAGATGCTATTTTGAAAGAT+AGG | - | chr5.1:27156644-27156663 | MS.gene45165:intron | 30.0% |
| !!! | GATTACCGTTTATTTTGGAT+AGG | - | chr5.1:27154671-27154690 | MS.gene45165:intron | 30.0% |
| !!! | TGATTTAATGTCACTTTTCG+GGG | + | chr5.1:27156340-27156359 | None:intergenic | 30.0% |
| !!! | TGCTATTTTGAAAGATAGGT+AGG | - | chr5.1:27156648-27156667 | MS.gene45165:intron | 30.0% |
| AACACAATAAGGCCTTAGAA+TGG | + | chr5.1:27158726-27158745 | None:intergenic | 35.0% | |
| AAGCAAACCTTAGATTTCTC+TGG | + | chr5.1:27154588-27154607 | None:intergenic | 35.0% | |
| AATACCCTAAAAAAGGGGAA+TGG | - | chr5.1:27157829-27157848 | MS.gene45165:CDS | 35.0% | |
| AATAGATTCTAACGCGAAGT+TGG | - | chr5.1:27156943-27156962 | MS.gene45165:intron | 35.0% | |
| AATAGCATTGTTTAGGGGAT+TGG | + | chr5.1:27157994-27158013 | None:intergenic | 35.0% | |
| AGAGATTTCCTCATAGTACA+AGG | + | chr5.1:27154987-27155006 | None:intergenic | 35.0% | |
| AGAGGTCAATAGCATTGTTT+AGG | + | chr5.1:27158001-27158020 | None:intergenic | 35.0% | |
| AGCTCATTACAAGAAGATTG+CGG | - | chr5.1:27154074-27154093 | MS.gene45165:intron | 35.0% | |
| AGGTCAATAGCATTGTTTAG+GGG | + | chr5.1:27157999-27158018 | None:intergenic | 35.0% | |
| ATAACAAAAACAAGACAGCC+AGG | + | chr5.1:27157706-27157725 | None:intergenic | 35.0% | |
| ATAGATTCTAACGCGAAGTT+GGG | - | chr5.1:27156944-27156963 | MS.gene45165:intron | 35.0% | |
| ATAGGTTATCCCTGTGAATA+GGG | - | chr5.1:27154689-27154708 | MS.gene45165:intron | 35.0% | |
| ATATGCTTTGTCAAGGAAAG+AGG | + | chr5.1:27156157-27156176 | None:intergenic | 35.0% | |
| ATCAGCTCCAACTAAAACAT+TGG | - | chr5.1:27154800-27154819 | MS.gene45165:intron | 35.0% | |
| CAAAACAAAGAAGAAACCAG+TGG | - | chr5.1:27154725-27154744 | MS.gene45165:intron | 35.0% | |
| CAAGTCGCAAATGATATTGT+TGG | + | chr5.1:27155909-27155928 | None:intergenic | 35.0% | |
| CTCTAATCCAAACATACACT+AGG | - | chr5.1:27158608-27158627 | MS.gene45165:CDS | 35.0% | |
| CTCTCATTATGGATAGTATG+GGG | - | chr5.1:27155003-27155022 | MS.gene45165:intron | 35.0% | |
| CTTGGTTGAAGTTCTTGAAA+AGG | + | chr5.1:27155825-27155844 | None:intergenic | 35.0% | |
| GAACTCAATGGAACACAATA+AGG | + | chr5.1:27158737-27158756 | None:intergenic | 35.0% | |
| GAATTTACAAAGCCAGAAAC+TGG | - | chr5.1:27157031-27157050 | MS.gene45165:intron | 35.0% | |
| GACGAAAACTACAAATAAGG+GGG | + | chr5.1:27156415-27156434 | None:intergenic | 35.0% | |
| GAGGTCAATAGCATTGTTTA+GGG | + | chr5.1:27158000-27158019 | None:intergenic | 35.0% | |
| GATACTTATTGTGTGTTTGG+GGG | - | chr5.1:27156684-27156703 | MS.gene45165:intron | 35.0% | |
| GGAGACATAAAAGTGATTGT+AGG | - | chr5.1:27156860-27156879 | MS.gene45165:intron | 35.0% | |
| GGCTAACAGATACTAACTTA+AGG | + | chr5.1:27155471-27155490 | None:intergenic | 35.0% | |
| GGTATATGTTGTGACATGTT+TGG | - | chr5.1:27158270-27158289 | MS.gene45165:CDS | 35.0% | |
| GTTGACGAAAGATGACTTAA+AGG | - | chr5.1:27155620-27155639 | MS.gene45165:intron | 35.0% | |
| TAAATCAGAGAAAGGGAAAG+CGG | - | chr5.1:27156353-27156372 | MS.gene45165:CDS | 35.0% | |
| TAGACGCAACATTATTAACC+TGG | + | chr5.1:27158443-27158462 | None:intergenic | 35.0% | |
| TAGGAAACCTAGTGTATGTT+TGG | + | chr5.1:27158618-27158637 | None:intergenic | 35.0% | |
| TCAACTTTGCGGAAAGAAAA+TGG | - | chr5.1:27155299-27155318 | MS.gene45165:CDS | 35.0% | |
| TCTCATTATGGATAGTATGG+GGG | - | chr5.1:27155004-27155023 | MS.gene45165:intron | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | - | chr5.1:27155403-27155422 | MS.gene45165:intron | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | + | chr5.1:27155422-27155403 | None:intergenic | 35.0% | |
| TGTGTACAAAGAGACAGAAA+AGG | - | chr5.1:27154524-27154543 | MS.gene45165:intron | 35.0% | |
| TTACCAAAGTTCATCAGTTG+AGG | - | chr5.1:27154371-27154390 | MS.gene45165:intron | 35.0% | |
| TTAGTGCATTTATCTCTCAG+TGG | + | chr5.1:27157144-27157163 | None:intergenic | 35.0% | |
| TTCATTGTGCTTACACATAG+TGG | - | chr5.1:27158680-27158699 | MS.gene45165:CDS | 35.0% | |
| TTCCAACTTCTTCAACTTTG+CGG | - | chr5.1:27155288-27155307 | MS.gene45165:CDS | 35.0% | |
| TTCTGTATTTCCAACACTCA+AGG | - | chr5.1:27154234-27154253 | MS.gene45165:intron | 35.0% | |
| ! | AAAAGTGATTGTAGGAGCAT+AGG | - | chr5.1:27156868-27156887 | MS.gene45165:intron | 35.0% |
| ! | AGCATAGGTTGAATATGGTT+TGG | - | chr5.1:27158249-27158268 | MS.gene45165:CDS | 35.0% |
| ! | CATGTGCCTATTTAACGTTT+TGG | + | chr5.1:27155521-27155540 | None:intergenic | 35.0% |
| ! | CTTCGCGTTAGAATCTATTT+TGG | + | chr5.1:27156942-27156961 | None:intergenic | 35.0% |
| ! | GCATTATTTTCCCTATTCAC+AGG | + | chr5.1:27154702-27154721 | None:intergenic | 35.0% |
| ! | GTTGTTGTTGTTGTTGTTGT+TGG | + | chr5.1:27155990-27156009 | None:intergenic | 35.0% |
| ! | TCTTCTTCAACGGAAGTTTT+TGG | + | chr5.1:27155083-27155102 | None:intergenic | 35.0% |
| ! | TTGGCTGGTTAAAATTCTTC+TGG | + | chr5.1:27155064-27155083 | None:intergenic | 35.0% |
| ! | TTTATGCACACGTCTTTTTC+AGG | + | chr5.1:27154450-27154469 | None:intergenic | 35.0% |
| ! | TTTTGACCACGATAAGAAGT+TGG | + | chr5.1:27157394-27157413 | None:intergenic | 35.0% |
| ! | TTTTTGTATGATGACCCTCT+TGG | - | chr5.1:27156241-27156260 | MS.gene45165:intron | 35.0% |
| !! | CATCACTTTTGGTTGAATTG+AGG | - | chr5.1:27157185-27157204 | MS.gene45165:intron | 35.0% |
| !! | CTTTTCAAGAACTTCAACCA+AGG | - | chr5.1:27155823-27155842 | MS.gene45165:intron | 35.0% |
| !! | CTTTTGGTTGAATTGAGGTT+TGG | - | chr5.1:27157190-27157209 | MS.gene45165:intron | 35.0% |
| !! | GCCTCGTATTTTATTTAGTC+GGG | + | chr5.1:27158127-27158146 | None:intergenic | 35.0% |
| !! | GGCCTCGTATTTTATTTAGT+CGG | + | chr5.1:27158128-27158147 | None:intergenic | 35.0% |
| !! | TAGGAGCATAGGATTGATTT+TGG | - | chr5.1:27156879-27156898 | MS.gene45165:intron | 35.0% |
| !! | TGTTTGGTGTGATATAGTAG+AGG | + | chr5.1:27158019-27158038 | None:intergenic | 35.0% |
| !! | TTGCAAGTGTCTGTTTCTTT+TGG | - | chr5.1:27153928-27153947 | MS.gene45165:intron | 35.0% |
| !!! | CAATCCATTCCCCTTTTTTA+GGG | + | chr5.1:27157836-27157855 | None:intergenic | 35.0% |
| !!! | CACTGGTTTCTTCTTTGTTT+TGG | + | chr5.1:27154727-27154746 | None:intergenic | 35.0% |
| AACCAGTTCCTTGTACTATG+AGG | - | chr5.1:27154976-27154995 | MS.gene45165:intron | 40.0% | |
| AACCGTTAAGCCAATGTCTA+AGG | + | chr5.1:27155579-27155598 | None:intergenic | 40.0% | |
| AATCAAGTTAGGGAGACCTA+TGG | - | chr5.1:27157678-27157697 | MS.gene45165:CDS | 40.0% | |
| AATTGAATCTGCTTGCGAGT+TGG | - | chr5.1:27156111-27156130 | MS.gene45165:intron | 40.0% | |
| ACTGACGGTGAGGATTTATT+TGG | + | chr5.1:27155492-27155511 | None:intergenic | 40.0% | |
| AGGACATTGTCAGAACTCAA+TGG | + | chr5.1:27158749-27158768 | None:intergenic | 40.0% | |
| AGTTGAGGTGGAGAATAAAG+AGG | - | chr5.1:27154386-27154405 | MS.gene45165:intron | 40.0% | |
| ATCAAAAACTCGCGCAGAAA+AGG | - | chr5.1:27157417-27157436 | MS.gene45165:CDS | 40.0% | |
| ATCAAGTTAGGGAGACCTAT+GGG | - | chr5.1:27157679-27157698 | MS.gene45165:CDS | 40.0% | |
| ATTCAGTGATAGTCGAGTCA+AGG | + | chr5.1:27158226-27158245 | None:intergenic | 40.0% | |
| CATAGACATGTGCAAAGATC+TGG | + | chr5.1:27154913-27154932 | None:intergenic | 40.0% | |
| CATTTAAGTGAAACCAACGC+AGG | + | chr5.1:27156600-27156619 | None:intergenic | 40.0% | |
| CATTTCCTATATTCCTGCGT+TGG | - | chr5.1:27156584-27156603 | MS.gene45165:intron | 40.0% | |
| CCTAAAAAAGGGGAATGGAT+TGG | - | chr5.1:27157834-27157853 | MS.gene45165:CDS | 40.0% | |
| CGAAGATCTGTCTTCTTCAA+CGG | + | chr5.1:27155093-27155112 | None:intergenic | 40.0% | |
| CGTTGAAGAAGACAGATCTT+CGG | - | chr5.1:27155091-27155110 | MS.gene45165:intron | 40.0% | |
| CTAACATATCTCAACACAGG+AGG | - | chr5.1:27157315-27157334 | MS.gene45165:intron | 40.0% | |
| CTTCTCTTGAGCCAACAATT+CGG | + | chr5.1:27154109-27154128 | None:intergenic | 40.0% | |
| CTTTGCGGAAAGAAAATGGA+AGG | - | chr5.1:27155303-27155322 | MS.gene45165:CDS | 40.0% | |
| GAGAATAAAGAGGTGGAAAG+TGG | - | chr5.1:27154396-27154415 | MS.gene45165:intron | 40.0% | |
| GATAGGTTATCCCTGTGAAT+AGG | - | chr5.1:27154688-27154707 | MS.gene45165:intron | 40.0% | |
| GCAAGAAATTGAAATCAGCC+CGG | - | chr5.1:27154281-27154300 | MS.gene45165:intron | 40.0% | |
| GCCCGACTAAATAAAATACG+AGG | - | chr5.1:27158123-27158142 | MS.gene45165:CDS | 40.0% | |
| GCGTCTCCAAACAAAATTGA+AGG | - | chr5.1:27156520-27156539 | MS.gene45165:intron | 40.0% | |
| GGATCATCCAGAGAAATCTA+AGG | - | chr5.1:27154578-27154597 | MS.gene45165:intron | 40.0% | |
| TATGGATAGTATGGGGGATA+AGG | - | chr5.1:27155010-27155029 | MS.gene45165:intron | 40.0% | |
| TCGGTAAAACAGCAGGTAAT+TGG | - | chr5.1:27155110-27155129 | MS.gene45165:intron | 40.0% | |
| TCGTAGCAAGAACATTATGG+CGG | + | chr5.1:27156069-27156088 | None:intergenic | 40.0% | |
| TGAAACCAACGCAGGAATAT+AGG | + | chr5.1:27156592-27156611 | None:intergenic | 40.0% | |
| TGTGTATCCACCTTAGACAT+TGG | - | chr5.1:27155566-27155585 | MS.gene45165:intron | 40.0% | |
| TTCCGCAAAGTTGAAGAAGT+TGG | + | chr5.1:27155293-27155312 | None:intergenic | 40.0% | |
| TTCCTCATAGTACAAGGAAC+TGG | + | chr5.1:27154981-27155000 | None:intergenic | 40.0% | |
| TTGCACATGTCTATGAGCTT+AGG | - | chr5.1:27154918-27154937 | MS.gene45165:intron | 40.0% | |
| ! | ATCTGCCGCTTCAACTAAAA+AGG | - | chr5.1:27154824-27154843 | MS.gene45165:intron | 40.0% |
| ! | GTCGAAATTTGAGATGCCTT+AGG | + | chr5.1:27154759-27154778 | None:intergenic | 40.0% |
| ! | TCAACATTCAAGTTTGGGAG+AGG | - | chr5.1:27157901-27157920 | MS.gene45165:CDS | 40.0% |
| ! | TCTGCCGCTTCAACTAAAAA+GGG | - | chr5.1:27154825-27154844 | MS.gene45165:intron | 40.0% |
| ! | TCTTTTCTCCATCCTCTCAA+CGG | + | chr5.1:27156292-27156311 | None:intergenic | 40.0% |
| ! | TTTTCATGACTACTCGTGCA+GGG | - | chr5.1:27158770-27158789 | MS.gene45165:CDS | 40.0% |
| !! | ACCACGATAAGAAGTTGGTA+GGG | + | chr5.1:27157389-27157408 | None:intergenic | 40.0% |
| !! | ACGTTTTGGCAAAAGACTGA+CGG | + | chr5.1:27155507-27155526 | None:intergenic | 40.0% |
| !! | CACCTTAGACATTGGCTTAA+CGG | - | chr5.1:27155574-27155593 | MS.gene45165:intron | 40.0% |
| !! | GATGTAGGCTTTGAACTTCT+CGG | + | chr5.1:27154783-27154802 | None:intergenic | 40.0% |
| !! | TGGAAGTGTTGTACGAACTT+TGG | - | chr5.1:27156314-27156333 | MS.gene45165:intron | 40.0% |
| !!! | CATTGGCTTAACGGTTTTGA+CGG | - | chr5.1:27155583-27155602 | MS.gene45165:intron | 40.0% |
| !!! | CCAATCCATTCCCCTTTTTT+AGG | + | chr5.1:27157837-27157856 | None:intergenic | 40.0% |
| !!! | GCAGATGCCAATGTTTTAGT+TGG | + | chr5.1:27154810-27154829 | None:intergenic | 40.0% |
| !!! | GTTTTAGTTGGAGCTGATGT+AGG | + | chr5.1:27154798-27154817 | None:intergenic | 40.0% |
| ACCACCAACACATGCTCATT+TGG | + | chr5.1:27157749-27157768 | None:intergenic | 45.0% | |
| ATTACAAGAAGATTGCGGCC+CGG | - | chr5.1:27154079-27154098 | MS.gene45165:intron | 45.0% | |
| ATTCACTGTCATGGGAGAGA+TGG | - | chr5.1:27153965-27153984 | MS.gene45165:intron | 45.0% | |
| CAGATCTTCGGTAAAACAGC+AGG | - | chr5.1:27155103-27155122 | MS.gene45165:intron | 45.0% | |
| CCAAAGTTCATCAGTTGAGG+TGG | - | chr5.1:27154374-27154393 | MS.gene45165:intron | 45.0% | |
| CCACATTGTGCTCCATTCTA+AGG | - | chr5.1:27158711-27158730 | MS.gene45165:CDS | 45.0% | |
| CCACCTCAACTGATGAACTT+TGG | + | chr5.1:27154377-27154396 | None:intergenic | 45.0% | |
| CCTTAGAATGGAGCACAATG+TGG | + | chr5.1:27158714-27158733 | None:intergenic | 45.0% | |
| CGTTAAGCCAATGTCTAAGG+TGG | + | chr5.1:27155576-27155595 | None:intergenic | 45.0% | |
| CGTTGAAGCTGAAGATGTGA+AGG | - | chr5.1:27154488-27154507 | MS.gene45165:intron | 45.0% | |
| CTCAACACAGGAGGAAAAAG+AGG | - | chr5.1:27157324-27157343 | MS.gene45165:intron | 45.0% | |
| GAAATTGAAATCAGCCCGGT+TGG | - | chr5.1:27154285-27154304 | MS.gene45165:intron | 45.0% | |
| GAATTCCGAATCAGTCTCAC+AGG | + | chr5.1:27154217-27154236 | None:intergenic | 45.0% | |
| GAGAGGATGGAGAAAAGAAG+TGG | - | chr5.1:27156294-27156313 | MS.gene45165:intron | 45.0% | |
| GAGGCAAGTTACTTCTAGTG+TGG | - | chr5.1:27154869-27154888 | MS.gene45165:intron | 45.0% | |
| GAGTCATGCGGATGATTTGA+AGG | - | chr5.1:27154320-27154339 | MS.gene45165:intron | 45.0% | |
| GCACGAGTAGTCATGAAAAC+AGG | + | chr5.1:27158769-27158788 | None:intergenic | 45.0% | |
| GGTACAACTACCTTGAGTGT+TGG | + | chr5.1:27154247-27154266 | None:intergenic | 45.0% | |
| GGTATAGATCTGAGCGGTAA+TGG | - | chr5.1:27154174-27154193 | MS.gene45165:intron | 45.0% | |
| GGTTCAGTAGTATGAGGAAC+TGG | + | chr5.1:27154960-27154979 | None:intergenic | 45.0% | |
| GTAGTATGAGGAACTGGATC+AGG | + | chr5.1:27154954-27154973 | None:intergenic | 45.0% | |
| TAACGCCTGTGAGACTGATT+CGG | - | chr5.1:27154209-27154228 | MS.gene45165:intron | 45.0% | |
| TCAAGAGAAGGAGATGGAGA+GGG | - | chr5.1:27154119-27154138 | MS.gene45165:intron | 45.0% | |
| TCATGCGGATGATTTGAAGG+AGG | - | chr5.1:27154323-27154342 | MS.gene45165:intron | 45.0% | |
| TGAGGTGGAGAATAAAGAGG+TGG | - | chr5.1:27154389-27154408 | MS.gene45165:intron | 45.0% | |
| TTCTTGCTTATCGCGTTCCT+CGG | + | chr5.1:27154268-27154287 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.1:27156023-27156042 | MS.gene45165:intron | 45.0% |
| ! | AGTAACTTGCCTCCTAGGTA+AGG | + | chr5.1:27154862-27154881 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.1:27156022-27156041 | MS.gene45165:intron | 45.0% |
| ! | CATTCAAGTTTGGGAGAGGT+CGG | - | chr5.1:27157905-27157924 | MS.gene45165:CDS | 45.0% |
| ! | CTAGAAGTAACTTGCCTCCT+AGG | + | chr5.1:27154867-27154886 | None:intergenic | 45.0% |
| ! | GACCACGATAAGAAGTTGGT+AGG | + | chr5.1:27157390-27157409 | None:intergenic | 45.0% |
| ! | GATCTGAGCGGTAATGGTAA+CGG | - | chr5.1:27154180-27154199 | MS.gene45165:intron | 45.0% |
| ! | GGAACTGGTTCAGTAGTATG+AGG | + | chr5.1:27154966-27154985 | None:intergenic | 45.0% |
| ! | GTTTTCATGACTACTCGTGC+AGG | - | chr5.1:27158769-27158788 | MS.gene45165:CDS | 45.0% |
| ! | TTCTTCTGTGCTACTGATCC+AGG | + | chr5.1:27154042-27154061 | None:intergenic | 45.0% |
| !! | ATAAGAAGTTGGTAGGGGTG+TGG | + | chr5.1:27157383-27157402 | None:intergenic | 45.0% |
| !! | CCACGATAAGAAGTTGGTAG+GGG | + | chr5.1:27157388-27157407 | None:intergenic | 45.0% |
| !! | CGAATTGTTGGCTCAAGAGA+AGG | - | chr5.1:27154107-27154126 | MS.gene45165:intron | 45.0% |
| !!! | CTTCAACGGAAGTTTTTGGC+TGG | + | chr5.1:27155079-27155098 | None:intergenic | 45.0% |
| ACCAGTGGCAGCAAAACCTA+AGG | - | chr5.1:27154740-27154759 | MS.gene45165:intron | 50.0% | |
| AGCCAACAATTCGGCTTTCC+GGG | + | chr5.1:27154100-27154119 | None:intergenic | 50.0% | |
| CACTCAAGGTAGTTGTACCG+AGG | - | chr5.1:27154248-27154267 | MS.gene45165:intron | 50.0% | |
| CCAACACATGCTCATTTGGC+AGG | + | chr5.1:27157745-27157764 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.1:27156024-27156043 | None:intergenic | 50.0% | |
| CCCCTACCAACTTCTTATCG+TGG | - | chr5.1:27157385-27157404 | MS.gene45165:intron | 50.0% | |
| CCTGCCAAATGAGCATGTGT+TGG | - | chr5.1:27157742-27157761 | MS.gene45165:CDS | 50.0% | |
| CTCAAGAGAAGGAGATGGAG+AGG | - | chr5.1:27154118-27154137 | MS.gene45165:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.1:27156027-27156046 | MS.gene45165:intron | 50.0% | |
| GAAATCCGCAGTCCTTACCT+AGG | - | chr5.1:27154847-27154866 | MS.gene45165:intron | 50.0% | |
| GAGCCAACAATTCGGCTTTC+CGG | + | chr5.1:27154101-27154120 | None:intergenic | 50.0% | |
| GAGGTGGAAAGTGGATCACA+TGG | - | chr5.1:27154405-27154424 | MS.gene45165:intron | 50.0% | |
| GCCAAATGAGCATGTGTTGG+TGG | - | chr5.1:27157745-27157764 | MS.gene45165:CDS | 50.0% | |
| GGAACTGGATCAGGCTTACT+TGG | + | chr5.1:27154945-27154964 | None:intergenic | 50.0% | |
| GGATGATTTGAAGGAGGAGG+AGG | - | chr5.1:27154329-27154348 | MS.gene45165:intron | 50.0% | |
| TCAGAGAAAGGGAAAGCGGT+AGG | - | chr5.1:27156357-27156376 | MS.gene45165:CDS | 50.0% | |
| TGATATCGGCAGGAGTCATG+CGG | - | chr5.1:27154308-27154327 | MS.gene45165:intron | 50.0% | |
| TGCGGATGATTTGAAGGAGG+AGG | - | chr5.1:27154326-27154345 | MS.gene45165:intron | 50.0% | |
| TTGGCAAAAGACTGACGGTG+AGG | + | chr5.1:27155502-27155521 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.1:27156021-27156040 | MS.gene45165:intron | 50.0% |
| ! | GTTGAGAAGTGTGCTACACC+TGG | - | chr5.1:27154021-27154040 | MS.gene45165:intron | 50.0% |
| ! | GTTGGCTCAAGAGAAGGAGA+TGG | - | chr5.1:27154113-27154132 | MS.gene45165:intron | 50.0% |
| !! | ATCAGCCCGGTTGGTGATAT+CGG | - | chr5.1:27154294-27154313 | MS.gene45165:intron | 50.0% |
| !! | CTTAACGGTTTTGACGGTGG+GGG | - | chr5.1:27155589-27155608 | MS.gene45165:intron | 50.0% |
| !! | GCTTAACGGTTTTGACGGTG+GGG | - | chr5.1:27155588-27155607 | MS.gene45165:intron | 50.0% |
| !! | GGCTTAACGGTTTTGACGGT+GGG | - | chr5.1:27155587-27155606 | MS.gene45165:intron | 50.0% |
| !! | TGGCTTAACGGTTTTGACGG+TGG | - | chr5.1:27155586-27155605 | MS.gene45165:intron | 50.0% |
| ACAAGACAGCCAGGTCCCAT+AGG | + | chr5.1:27157697-27157716 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr5.1:27156035-27156054 | MS.gene45165:intron | 55.0% | |
| AGAAGGAGATGGAGAGGGAG+AGG | - | chr5.1:27154124-27154143 | MS.gene45165:intron | 55.0% | |
| ATAGGCCTGCTACCGTTGAG+AGG | - | chr5.1:27156277-27156296 | MS.gene45165:intron | 55.0% | |
| ATCCGCAGTCCTTACCTAGG+AGG | - | chr5.1:27154850-27154869 | MS.gene45165:intron | 55.0% | |
| ATCCTGGACAGGCTCCTTCA+AGG | - | chr5.1:27155249-27155268 | MS.gene45165:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.1:27156036-27156055 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.1:27156029-27156048 | None:intergenic | 55.0% | |
| CTCCTGCCGATATCACCAAC+CGG | + | chr5.1:27154303-27154322 | None:intergenic | 55.0% | |
| GAAGGAGATGGAGAGGGAGA+GGG | - | chr5.1:27154125-27154144 | MS.gene45165:intron | 55.0% | |
| GAAGGAGGAGGAGGAAGTTG+CGG | - | chr5.1:27154338-27154357 | MS.gene45165:intron | 55.0% | |
| GAGCGAGAAGCTCCAGTTTC+TGG | + | chr5.1:27157046-27157065 | None:intergenic | 55.0% | |
| TCCATCCTCTCAACGGTAGC+AGG | + | chr5.1:27156285-27156304 | None:intergenic | 55.0% | |
| TCCTGCCGATATCACCAACC+GGG | + | chr5.1:27154302-27154321 | None:intergenic | 55.0% | |
| TCCTGGACAGGCTCCTTCAA+GGG | - | chr5.1:27155250-27155269 | MS.gene45165:intron | 55.0% | |
| TGCCTCCTAGGTAAGGACTG+CGG | + | chr5.1:27154855-27154874 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.1:27156035-27156054 | None:intergenic | 55.0% | |
| TTAGGGAGACCTATGGGACC+TGG | - | chr5.1:27157685-27157704 | MS.gene45165:CDS | 55.0% | |
| TTCAAGGGGGACTGCGTCAA+AGG | - | chr5.1:27155265-27155284 | MS.gene45165:intron | 55.0% | |
| TTTGACGCAGTCCCCCTTGA+AGG | + | chr5.1:27155266-27155285 | None:intergenic | 55.0% | |
| ! | GCCTTAGGTTTTGCTGCCAC+TGG | + | chr5.1:27154744-27154763 | None:intergenic | 55.0% |
| ! | GGAGGAGGAAGTTGCGGTTT+TGG | - | chr5.1:27154344-27154363 | MS.gene45165:intron | 55.0% |
| CCTGGACAGGCTCCTTCAAG+GGG | - | chr5.1:27155251-27155270 | MS.gene45165:intron | 60.0% | |
| CTGGACAGGCTCCTTCAAGG+GGG | - | chr5.1:27155252-27155271 | MS.gene45165:intron | 60.0% | |
| GCCTGCTACCGTTGAGAGGA+TGG | - | chr5.1:27156281-27156300 | MS.gene45165:intron | 60.0% | |
| GGCCCGGAAAGCCGAATTGT+TGG | - | chr5.1:27154095-27154114 | MS.gene45165:intron | 60.0% | |
| CCCCTTGAAGGAGCCTGTCC+AGG | + | chr5.1:27155254-27155273 | None:intergenic | 65.0% | |
| !! | GCCCGGTTGGTGATATCGGC+AGG | - | chr5.1:27154298-27154317 | MS.gene45165:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 27153898 | 27158820 | 27153898 | ID=MS.gene45165 |
| chr5.1 | mRNA | 27153898 | 27158820 | 27153898 | ID=MS.gene45165.t1;Parent=MS.gene45165 |
| chr5.1 | exon | 27158119 | 27158820 | 27158119 | ID=MS.gene45165.t1.exon1;Parent=MS.gene45165.t1 |
| chr5.1 | CDS | 27158119 | 27158820 | 27158119 | ID=cds.MS.gene45165.t1;Parent=MS.gene45165.t1 |
| chr5.1 | exon | 27157594 | 27158025 | 27157594 | ID=MS.gene45165.t1.exon2;Parent=MS.gene45165.t1 |
| chr5.1 | CDS | 27157594 | 27158025 | 27157594 | ID=cds.MS.gene45165.t1;Parent=MS.gene45165.t1 |
| chr5.1 | exon | 27157394 | 27157458 | 27157394 | ID=MS.gene45165.t1.exon3;Parent=MS.gene45165.t1 |
| chr5.1 | CDS | 27157394 | 27157458 | 27157394 | ID=cds.MS.gene45165.t1;Parent=MS.gene45165.t1 |
| chr5.1 | exon | 27156344 | 27156437 | 27156344 | ID=MS.gene45165.t1.exon4;Parent=MS.gene45165.t1 |
| chr5.1 | CDS | 27156344 | 27156437 | 27156344 | ID=cds.MS.gene45165.t1;Parent=MS.gene45165.t1 |
| chr5.1 | exon | 27156177 | 27156248 | 27156177 | ID=MS.gene45165.t1.exon5;Parent=MS.gene45165.t1 |
| chr5.1 | CDS | 27156177 | 27156248 | 27156177 | ID=cds.MS.gene45165.t1;Parent=MS.gene45165.t1 |
| chr5.1 | exon | 27155280 | 27155384 | 27155280 | ID=MS.gene45165.t1.exon6;Parent=MS.gene45165.t1 |
| chr5.1 | CDS | 27155280 | 27155384 | 27155280 | ID=cds.MS.gene45165.t1;Parent=MS.gene45165.t1 |
| chr5.1 | exon | 27153898 | 27153927 | 27153898 | ID=MS.gene45165.t1.exon7;Parent=MS.gene45165.t1 |
| chr5.1 | CDS | 27153898 | 27153927 | 27153898 | ID=cds.MS.gene45165.t1;Parent=MS.gene45165.t1 |
| Gene Sequence |
| Protein sequence |
