Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58579.t1 | RHN55186.1 | 83.2 | 512 | 70 | 3 | 1 | 499 | 112 | 620 | 5.90E-183 | 650.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58579.t1 | Q67Y69 | 60.7 | 61 | 24 | 0 | 8 | 68 | 16 | 76 | 2.2e-13 | 78.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58579.t1 | G7K5M5 | 83.2 | 512 | 70 | 3 | 1 | 499 | 1 | 509 | 4.3e-183 | 650.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene58579 | 0.812608 | 3.89E-51 | -1.69E-46 |
| MS.gene049178 | MS.gene58579 | 0.808325 | 3.27E-50 | -1.69E-46 |
| MS.gene049786 | MS.gene58579 | 0.800128 | 1.67E-48 | -1.69E-46 |
| MS.gene050439 | MS.gene58579 | 0.818627 | 1.78E-52 | -1.69E-46 |
| MS.gene051102 | MS.gene58579 | 0.821845 | 3.25E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene58579 | 0.810315 | 1.23E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene58579 | 0.810197 | 1.30E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene58579 | 0.826785 | 2.24E-54 | -1.69E-46 |
| MS.gene056181 | MS.gene58579 | 0.838656 | 2.53E-57 | -1.69E-46 |
| MS.gene056638 | MS.gene58579 | 0.8079 | 4.03E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene58579 | 0.80407 | 2.58E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene58579 | 0.81553 | 8.82E-52 | -1.69E-46 |
| MS.gene058639 | MS.gene58579 | 0.830243 | 3.28E-55 | -1.69E-46 |
| MS.gene059171 | MS.gene58579 | 0.808549 | 2.93E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene58579 | 0.813697 | 2.25E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene58579 | 0.814881 | 1.23E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene58579 | 0.817576 | 3.07E-52 | -1.69E-46 |
| MS.gene060840 | MS.gene58579 | 0.806676 | 7.33E-50 | -1.69E-46 |
| MS.gene060869 | MS.gene58579 | 0.814675 | 1.37E-51 | -1.69E-46 |
| MS.gene060870 | MS.gene58579 | 0.828765 | 7.50E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58579 | MS.gene45165 | PPI |
| MS.gene58579 | MS.gene027495 | PPI |
| MS.gene58579 | MS.gene79013 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58579.t1 | MTR_5g036560 | 91.016 | 512 | 30 | 3 | 1 | 499 | 1 | 509 | 0.0 | 898 |
| MS.gene58579.t1 | MTR_3g086090 | 32.249 | 338 | 172 | 13 | 10 | 316 | 31 | 342 | 1.44e-23 | 104 |
| MS.gene58579.t1 | MTR_3g086090 | 34.524 | 252 | 124 | 10 | 10 | 244 | 12 | 239 | 8.51e-22 | 99.4 |
| MS.gene58579.t1 | MTR_3g086090 | 34.524 | 252 | 124 | 10 | 10 | 244 | 31 | 258 | 9.56e-22 | 99.4 |
| MS.gene58579.t1 | MTR_6g022230 | 67.857 | 56 | 18 | 0 | 7 | 62 | 27 | 82 | 5.13e-19 | 90.5 |
| MS.gene58579.t1 | MTR_0117s0080 | 64.151 | 53 | 19 | 0 | 10 | 62 | 35 | 87 | 2.48e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58579.t1 | AT1G70100 | 37.945 | 506 | 208 | 24 | 6 | 457 | 20 | 473 | 1.96e-58 | 201 |
| MS.gene58579.t1 | AT1G70100 | 37.945 | 506 | 208 | 24 | 6 | 457 | 20 | 473 | 2.17e-57 | 199 |
| MS.gene58579.t1 | AT1G70100 | 37.945 | 506 | 208 | 24 | 6 | 457 | 20 | 473 | 2.17e-57 | 199 |
| MS.gene58579.t1 | AT1G70100 | 37.755 | 490 | 203 | 24 | 6 | 441 | 20 | 461 | 4.54e-55 | 191 |
| MS.gene58579.t1 | AT1G70100 | 37.755 | 490 | 203 | 24 | 6 | 441 | 20 | 461 | 4.54e-55 | 191 |
| MS.gene58579.t1 | AT1G70100 | 37.755 | 490 | 203 | 24 | 6 | 441 | 20 | 461 | 4.54e-55 | 191 |
| MS.gene58579.t1 | AT1G24160 | 46.569 | 204 | 88 | 7 | 6 | 209 | 30 | 212 | 3.86e-38 | 147 |
| MS.gene58579.t1 | AT1G24160 | 46.569 | 204 | 88 | 7 | 6 | 209 | 30 | 212 | 3.86e-38 | 147 |
| MS.gene58579.t1 | AT3G26050 | 52.564 | 78 | 37 | 0 | 8 | 85 | 28 | 105 | 1.31e-19 | 92.4 |
| MS.gene58579.t1 | AT3G27350 | 64.516 | 62 | 21 | 1 | 10 | 70 | 30 | 91 | 2.32e-18 | 85.5 |
| MS.gene58579.t1 | AT3G27350 | 64.516 | 62 | 21 | 1 | 10 | 70 | 30 | 91 | 6.73e-18 | 85.1 |
| MS.gene58579.t1 | AT1G70950 | 60.656 | 61 | 24 | 0 | 8 | 68 | 16 | 76 | 2.65e-17 | 84.7 |
| MS.gene58579.t1 | AT5G40700 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 7.12e-17 | 80.9 |
| MS.gene58579.t1 | AT5G40700 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 1.30e-16 | 80.9 |
| MS.gene58579.t1 | AT5G40700 | 66.038 | 53 | 18 | 0 | 10 | 62 | 30 | 82 | 1.32e-16 | 80.9 |
| MS.gene58579.t1 | AT1G23060 | 62.295 | 61 | 23 | 0 | 8 | 68 | 16 | 76 | 2.81e-16 | 80.9 |
| MS.gene58579.t1 | AT1G23060 | 62.295 | 61 | 23 | 0 | 8 | 68 | 16 | 76 | 2.81e-16 | 80.9 |
| MS.gene58579.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 1.69e-14 | 74.7 |
| MS.gene58579.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 2.03e-14 | 75.5 |
| MS.gene58579.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 2.07e-14 | 75.5 |
| MS.gene58579.t1 | AT3G01710 | 61.404 | 57 | 21 | 1 | 7 | 62 | 20 | 76 | 2.51e-14 | 75.1 |
| MS.gene58579.t1 | AT3G27350 | 67.347 | 49 | 15 | 1 | 23 | 70 | 3 | 51 | 3.21e-13 | 70.5 |
Find 110 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCTTCCAAATACTTATT+TGG | 0.140230 | 5.3:+24977132 | None:intergenic |
| CACTGGTTTCTTCTTTGTTT+TGG | 0.160966 | 5.3:+24976408 | None:intergenic |
| ATTCTCTCCAAATAAGTATT+TGG | 0.192425 | 5.3:-24977139 | MS.gene58579:CDS |
| ATCTGCCGCTTCAACTAAAA+AGG | 0.192462 | 5.3:-24976308 | MS.gene58579:CDS |
| ATCTCTCATTATGGATAGTA+TGG | 0.195712 | 5.3:-24976131 | MS.gene58579:CDS |
| ACAACTTTGCGGAAAGAAAA+TGG | 0.230318 | 5.3:-24975834 | MS.gene58579:CDS |
| AAGCAAACCTTAGATTTCTT+TGG | 0.233076 | 5.3:+24976547 | None:intergenic |
| GAGCCAACAATTCGGCTTTC+CGG | 0.260429 | 5.3:+24977034 | None:intergenic |
| GGAGGAGGAAGTTGCGGTTT+TGG | 0.263005 | 5.3:-24976788 | MS.gene58579:CDS |
| AGCCAACAATTCGGCTTTCC+GGG | 0.287622 | 5.3:+24977035 | None:intergenic |
| TTGGCTGGTTAAAATTCTTC+TGG | 0.301994 | 5.3:+24976071 | None:intergenic |
| TATGAGGAAATCTCTCATTA+TGG | 0.319055 | 5.3:-24976140 | MS.gene58579:CDS |
| GACCACGATAAGAAGTTGTT+AGG | 0.334966 | 5.3:+24974141 | None:intergenic |
| GATAGGTTATCCCTGTGAAT+AGG | 0.335244 | 5.3:-24976444 | MS.gene58579:intron |
| TTGCAAGTGTCTGTTTCTTT+TGG | 0.337585 | 5.3:-24977204 | MS.gene58579:CDS |
| ATCAGCCCGGTTGGTGATAT+CGG | 0.358999 | 5.3:-24976838 | MS.gene58579:CDS |
| TTCTTCTGTGCTACTGATCC+AGG | 0.363303 | 5.3:+24977093 | None:intergenic |
| GGATCATCCAAAGAAATCTA+AGG | 0.365888 | 5.3:-24976554 | MS.gene58579:intron |
| TTCCGCAAAGTTGTAGAAGT+TGG | 0.385654 | 5.3:+24975843 | None:intergenic |
| TTCAGATCAGAAGAAAATAA+TGG | 0.389148 | 5.3:-24976979 | MS.gene58579:CDS |
| CTAGAAGTAACTTGCCTCCT+AGG | 0.410045 | 5.3:+24976268 | None:intergenic |
| GGAACTGGATCAGGCTTACT+TGG | 0.415359 | 5.3:+24976190 | None:intergenic |
| TTCTTGCTTATCGCGTTCCT+CGG | 0.421641 | 5.3:+24976867 | None:intergenic |
| ATAGGTTATCCCTGTGAATA+GGG | 0.434793 | 5.3:-24976443 | MS.gene58579:intron |
| TTCCTCATAGTACGAGGAAC+TGG | 0.439423 | 5.3:+24976154 | None:intergenic |
| TTCCAACTTCTACAACTTTG+CGG | 0.441167 | 5.3:-24975845 | MS.gene58579:CDS |
| AAAGCTAAAGCATGATTTCA+AGG | 0.446740 | 5.3:-24974171 | MS.gene58579:CDS |
| TCCATCCTCTCAGCGGTAGC+AGG | 0.446927 | 5.3:+24975266 | None:intergenic |
| CTCCTGCCGATATCACCAAC+CGG | 0.447622 | 5.3:+24976832 | None:intergenic |
| CTTCTCTTGAGCCAACAATT+CGG | 0.451413 | 5.3:+24977026 | None:intergenic |
| TTGCACATGTCTATGAGCTT+AGG | 0.451785 | 5.3:-24976214 | MS.gene58579:CDS |
| AGAAGGAGATGGAGAGGGAG+AGG | 0.454029 | 5.3:-24977008 | MS.gene58579:CDS |
| GATGTAGGCTTTGAACTTCT+CGG | 0.454715 | 5.3:+24976352 | None:intergenic |
| GGTTCAGTAGTATGAGGAAC+TGG | 0.457148 | 5.3:+24976175 | None:intergenic |
| GGCCCGGAAAGCCGAATTGT+TGG | 0.460858 | 5.3:-24977037 | MS.gene58579:CDS |
| CATAGACATGTGCAAAGATC+TGG | 0.461378 | 5.3:+24976222 | None:intergenic |
| CCACCTCAACTGATGAACTT+TGG | 0.468288 | 5.3:+24976758 | None:intergenic |
| CTCAAGAGAAGGAGATGGAG+AGG | 0.471982 | 5.3:-24977014 | MS.gene58579:CDS |
| ACCACGATAAGAAGTTGTTA+GGG | 0.483102 | 5.3:+24974142 | None:intergenic |
| GAGAATAAAGAGGTGGAAAG+TGG | 0.486653 | 5.3:-24976736 | MS.gene58579:CDS |
| GAGTCATGCGGATGATTTGA+AGG | 0.487910 | 5.3:-24976812 | MS.gene58579:CDS |
| TGGAAGTGTTGTACAAACTT+TGG | 0.489754 | 5.3:-24975234 | MS.gene58579:CDS |
| GTCGAAATTTGAGATGCCTT+AGG | 0.493805 | 5.3:+24976376 | None:intergenic |
| GCCCGGTTGGTGATATCGGC+AGG | 0.496567 | 5.3:-24976834 | MS.gene58579:CDS |
| TTGATAATGATTCACTGTCA+TGG | 0.498358 | 5.3:-24977176 | MS.gene58579:CDS |
| GCCTGCTACCGCTGAGAGGA+TGG | 0.498899 | 5.3:-24975267 | MS.gene58579:CDS |
| TGAAGATCTGTCTTCTTCTA+CGG | 0.498983 | 5.3:+24976042 | None:intergenic |
| GAAGGAGGAGGAGGAAGTTG+CGG | 0.503678 | 5.3:-24976794 | MS.gene58579:CDS |
| TGATAATGATTCACTGTCAT+GGG | 0.504101 | 5.3:-24977175 | MS.gene58579:CDS |
| GTAGTATGAGGAACTGGATC+AGG | 0.506674 | 5.3:+24976181 | None:intergenic |
| AGTGACATTAAATCAGAGAA+AGG | 0.512134 | 5.3:-24975203 | MS.gene58579:CDS |
| GGTATAGATCTGAGCGGTAA+TGG | 0.512864 | 5.3:-24976958 | MS.gene58579:CDS |
| ATCAGCTCCAACTAAAACAT+TGG | 0.513745 | 5.3:-24976332 | MS.gene58579:CDS |
| GCGTCTCCAAACAAAATTGA+AGG | 0.515742 | 5.3:-24975029 | MS.gene58579:intron |
| GTGACATTAAATCAGAGAAA+GGG | 0.517883 | 5.3:-24975202 | MS.gene58579:CDS |
| GAAGGAGATGGAGAGGGAGA+GGG | 0.518011 | 5.3:-24977007 | MS.gene58579:CDS |
| GGATGATTTGAAGGAGGAGG+AGG | 0.520239 | 5.3:-24976803 | MS.gene58579:CDS |
| TAACGCCTGTGAGACTGATT+CGG | 0.522705 | 5.3:-24976923 | MS.gene58579:CDS |
| CAGATCTTCAGTAATAAAGC+AGG | 0.527908 | 5.3:-24976029 | MS.gene58579:intron |
| GTTGAGAAGTGTGCTACACC+TGG | 0.537623 | 5.3:-24977111 | MS.gene58579:CDS |
| TCTCTCATTATGGATAGTAT+GGG | 0.541545 | 5.3:-24976130 | MS.gene58579:CDS |
| CCAAAGTTCATCAGTTGAGG+TGG | 0.544431 | 5.3:-24976758 | MS.gene58579:CDS |
| AGTAACTTGCCTCCTAGGTA+AGG | 0.548527 | 5.3:+24976273 | None:intergenic |
| ATCCTGACAGGCTCCTCCAA+GGG | 0.550707 | 5.3:-24975883 | MS.gene58579:intron |
| CTCTCATTATGGATAGTATG+GGG | 0.551989 | 5.3:-24976129 | MS.gene58579:CDS |
| TGCGGATGATTTGAAGGAGG+AGG | 0.552581 | 5.3:-24976806 | MS.gene58579:CDS |
| TTCTGTATTTCCAACACTCA+AGG | 0.555022 | 5.3:-24976898 | MS.gene58579:CDS |
| GAAATTGAAATCAGCCCGGT+TGG | 0.555960 | 5.3:-24976847 | MS.gene58579:CDS |
| CGAATTGTTGGCTCAAGAGA+AGG | 0.556667 | 5.3:-24977025 | MS.gene58579:CDS |
| AACCAGTTCCTCGTACTATG+AGG | 0.558590 | 5.3:-24976156 | MS.gene58579:CDS |
| GAATTCCGAATCAGTCTCAC+AGG | 0.570594 | 5.3:+24976918 | None:intergenic |
| ATTCACTGTCATGGGAGAGA+TGG | 0.571273 | 5.3:-24977167 | MS.gene58579:CDS |
| TTACCAAAGTTCATCAGTTG+AGG | 0.572684 | 5.3:-24976761 | MS.gene58579:CDS |
| GGAACTGGTTCAGTAGTATG+AGG | 0.573216 | 5.3:+24976169 | None:intergenic |
| ATAAGAAGTTGTTAGGGGTG+TGG | 0.577233 | 5.3:+24974148 | None:intergenic |
| TATCCTGACAGGCTCCTCCA+AGG | 0.579565 | 5.3:-24975884 | MS.gene58579:intron |
| ACCAGTGGCAGCAAAACCTA+AGG | 0.581842 | 5.3:-24976392 | MS.gene58579:CDS |
| TGTGTACAAAGAGACAGAAA+AGG | 0.583777 | 5.3:-24976608 | MS.gene58579:CDS |
| GAGAGGATGGAGAAAAGAAG+TGG | 0.591130 | 5.3:-24975254 | MS.gene58579:CDS |
| TGAGGTGGAGAATAAAGAGG+TGG | 0.606003 | 5.3:-24976743 | MS.gene58579:CDS |
| ACCACTTGTGCAGCTATCGA+CGG | 0.610344 | 5.3:+24972675 | None:intergenic |
| GATCTGAGCGGTAATGGTAA+CGG | 0.615279 | 5.3:-24976952 | MS.gene58579:CDS |
| GTTGGCTCAAGAGAAGGAGA+TGG | 0.615563 | 5.3:-24977019 | MS.gene58579:CDS |
| CTTTGCGGAAAGAAAATGGA+AGG | 0.615877 | 5.3:-24975830 | MS.gene58579:intron |
| GGTACAACTACCTTGAGTGT+TGG | 0.618926 | 5.3:+24976888 | None:intergenic |
| GAGGCAAGTTACTTCTAGTG+TGG | 0.620877 | 5.3:-24976263 | MS.gene58579:CDS |
| TCAAGAGAAGGAGATGGAGA+GGG | 0.629762 | 5.3:-24977013 | MS.gene58579:CDS |
| CGTTGAAGCTGAAGATGTGA+AGG | 0.632249 | 5.3:-24976644 | MS.gene58579:CDS |
| AGTTGAGGTGGAGAATAAAG+AGG | 0.632776 | 5.3:-24976746 | MS.gene58579:CDS |
| TAAATCAGAGAAAGGGAAAG+CGG | 0.634535 | 5.3:-24975195 | MS.gene58579:intron |
| GCAAGAAATTGAAATCAGCC+CGG | 0.634918 | 5.3:-24976851 | MS.gene58579:CDS |
| ATTACAAGAAGATTGCGGCC+CGG | 0.636848 | 5.3:-24977053 | MS.gene58579:CDS |
| TCCTGACAGGCTCCTCCAAG+GGG | 0.640441 | 5.3:-24975882 | MS.gene58579:intron |
| TCCTGCCGATATCACCAACC+GGG | 0.642989 | 5.3:+24976833 | None:intergenic |
| CAAAACAAAGAAGAAACCAG+TGG | 0.646612 | 5.3:-24976407 | MS.gene58579:CDS |
| GAAATCCGCAGTCCTTACCT+AGG | 0.647614 | 5.3:-24976285 | MS.gene58579:CDS |
| CCCCTAACAACTTCTTATCG+TGG | 0.648364 | 5.3:-24974143 | MS.gene58579:CDS |
| ATCCGCAGTCCTTACCTAGG+AGG | 0.650233 | 5.3:-24976282 | MS.gene58579:CDS |
| AGCTCATTACAAGAAGATTG+CGG | 0.664583 | 5.3:-24977058 | MS.gene58579:CDS |
| CCACGATAAGAAGTTGTTAG+GGG | 0.668169 | 5.3:+24974143 | None:intergenic |
| ATAGGCCTGCTACCGCTGAG+AGG | 0.670892 | 5.3:-24975271 | MS.gene58579:intron |
| GAGGTGGAAAGTGGATCACA+TGG | 0.674354 | 5.3:-24976727 | MS.gene58579:CDS |
| TGATATCGGCAGGAGTCATG+CGG | 0.677640 | 5.3:-24976824 | MS.gene58579:CDS |
| TCTCATTATGGATAGTATGG+GGG | 0.688469 | 5.3:-24976128 | MS.gene58579:CDS |
| CACTCAAGGTAGTTGTACCG+AGG | 0.698782 | 5.3:-24976884 | MS.gene58579:CDS |
| TCATGCGGATGATTTGAAGG+AGG | 0.701389 | 5.3:-24976809 | MS.gene58579:CDS |
| AGAGATTTCCTCATAGTACG+AGG | 0.729557 | 5.3:+24976148 | None:intergenic |
| TGCCTCCTAGGTAAGGACTG+CGG | 0.746167 | 5.3:+24976280 | None:intergenic |
| CCTGACAGGCTCCTCCAAGG+GGG | 0.748791 | 5.3:-24975881 | MS.gene58579:intron |
| AATAATGGTATAGATCTGAG+CGG | 0.762921 | 5.3:-24976964 | MS.gene58579:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAAAAAAAAAAATTTGA+GGG | + | chr5.3:24976467-24976486 | None:intergenic | 10.0% |
| !!! | AATATATTTTTGTAATGTTT+CGG | - | chr5.3:24975194-24975213 | MS.gene58579:intron | 10.0% |
| !!! | ACAAATAAAATATTTCTTTT+CGG | - | chr5.3:24976768-24976787 | MS.gene58579:CDS | 10.0% |
| !!! | ATTAATTTTTTTTTGTGAAT+AGG | - | chr5.3:24974633-24974652 | MS.gene58579:intron | 10.0% |
| !!! | CATAATGTTAAATTTTTTAA+AGG | - | chr5.3:24973428-24973447 | MS.gene58579:intron | 10.0% |
| !! | AAATCATGTTTGATATATAT+TGG | - | chr5.3:24976798-24976817 | MS.gene58579:CDS | 15.0% |
| !! | AAGATATTGTTAAAATATGA+GGG | + | chr5.3:24976832-24976851 | None:intergenic | 15.0% |
| !! | CTCAAAAAAAAAAAAATTTG+AGG | + | chr5.3:24976468-24976487 | None:intergenic | 15.0% |
| !! | TAAGATATTGTTAAAATATG+AGG | + | chr5.3:24976833-24976852 | None:intergenic | 15.0% |
| !! | TTCTTAGAAAATTATTTAGA+TGG | + | chr5.3:24976430-24976449 | None:intergenic | 15.0% |
| !! | TTTACATAATGAACATTATT+TGG | + | chr5.3:24976926-24976945 | None:intergenic | 15.0% |
| !!! | ATACCAAAAAGTTATTTTTA+AGG | + | chr5.3:24975928-24975947 | None:intergenic | 15.0% |
| !!! | CTCAAATTTTTTTTTTTTTG+AGG | - | chr5.3:24976466-24976485 | MS.gene58579:intron | 15.0% |
| !! | ATTCAGAATAGACATAAAAA+TGG | + | chr5.3:24976312-24976331 | None:intergenic | 20.0% |
| !! | CAATTTATATATAGATTCCT+TGG | + | chr5.3:24974285-24974304 | None:intergenic | 20.0% |
| !! | CTATAAACTAAATACATGAT+TGG | + | chr5.3:24975631-24975650 | None:intergenic | 20.0% |
| !! | GATGAAAGAAAAAAATAGTT+TGG | + | chr5.3:24974815-24974834 | None:intergenic | 20.0% |
| !! | TAATAATGTTGCATCTAAAA+GGG | - | chr5.3:24976882-24976901 | MS.gene58579:CDS | 20.0% |
| !! | TAGATGCAACATTATTAATA+TGG | + | chr5.3:24976879-24976898 | None:intergenic | 20.0% |
| !! | TTAATAATGTTGCATCTAAA+AGG | - | chr5.3:24976881-24976900 | MS.gene58579:CDS | 20.0% |
| !! | TTCAGAATAGACATAAAAAT+GGG | + | chr5.3:24976311-24976330 | None:intergenic | 20.0% |
| !!! | AGAGTTTGTAAATTTGATTT+TGG | + | chr5.3:24977028-24977047 | None:intergenic | 20.0% |
| !!! | CAACCTTAAAAATAACTTTT+TGG | - | chr5.3:24975922-24975941 | MS.gene58579:intron | 20.0% |
| !!! | CATGTATTTAGTTTATAGAA+GGG | - | chr5.3:24975633-24975652 | MS.gene58579:intron | 20.0% |
| !!! | GAAAATTTTACCACTTTTTA+GGG | + | chr5.3:24976232-24976251 | None:intergenic | 20.0% |
| !!! | GACTTTTACTTAATAATAGA+GGG | + | chr5.3:24976504-24976523 | None:intergenic | 20.0% |
| !!! | GATTTTTTTTAAAATCGACT+TGG | - | chr5.3:24975110-24975129 | MS.gene58579:intron | 20.0% |
| !!! | GTCATTTTAATAGAAAATCA+CGG | + | chr5.3:24974933-24974952 | None:intergenic | 20.0% |
| !!! | TAAGTGTCATTCAATAATAA+CGG | - | chr5.3:24975275-24975294 | MS.gene58579:intron | 20.0% |
| !!! | TAATGTTTCGGTTTAATTTA+GGG | - | chr5.3:24975206-24975225 | MS.gene58579:CDS | 20.0% |
| !!! | TATTTGATTACCGTTTATTT+TGG | - | chr5.3:24973456-24973475 | MS.gene58579:intron | 20.0% |
| !!! | TCATGTATTTAGTTTATAGA+AGG | - | chr5.3:24975632-24975651 | MS.gene58579:intron | 20.0% |
| !!! | TCTATTTTGATGAAATTGTA+TGG | - | chr5.3:24974609-24974628 | MS.gene58579:intron | 20.0% |
| !!! | TGAAAATTTTACCACTTTTT+AGG | + | chr5.3:24976233-24976252 | None:intergenic | 20.0% |
| !!! | TGATTTTCTATTAAAATGAC+TGG | - | chr5.3:24974933-24974952 | MS.gene58579:intron | 20.0% |
| !!! | TTTCATCATTATTTCTAGTA+TGG | + | chr5.3:24976167-24976186 | None:intergenic | 20.0% |
| !!! | TTTCTAGCTTTATAAATTCA+TGG | + | chr5.3:24975395-24975414 | None:intergenic | 20.0% |
| ! | AATAGATTCTAATGTGAAGT+TGG | - | chr5.3:24975309-24975328 | MS.gene58579:intron | 25.0% |
| ! | AATGATACTTATTGTGTTTG+GGG | - | chr5.3:24975053-24975072 | MS.gene58579:CDS | 25.0% |
| ! | AATGTATTGTACTTCGTAAA+CGG | - | chr5.3:24974394-24974413 | MS.gene58579:intron | 25.0% |
| ! | ACATTATGATAACAAGATCA+TGG | + | chr5.3:24976746-24976765 | None:intergenic | 25.0% |
| ! | ACTTCTTCCAAATACTTATT+TGG | + | chr5.3:24972793-24972812 | None:intergenic | 25.0% |
| ! | AGAAGAAAACTACAAATAAG+GGG | + | chr5.3:24974790-24974809 | None:intergenic | 25.0% |
| ! | ATAGATTCTAATGTGAAGTT+GGG | - | chr5.3:24975310-24975329 | MS.gene58579:intron | 25.0% |
| ! | ATTATTAAGTAAAAGTCGCA+TGG | - | chr5.3:24976507-24976526 | MS.gene58579:intron | 25.0% |
| ! | ATTATTGAGTGAAATTCATG+TGG | + | chr5.3:24976578-24976597 | None:intergenic | 25.0% |
| ! | ATTCTCTCCAAATAAGTATT+TGG | - | chr5.3:24972783-24972802 | MS.gene58579:intron | 25.0% |
| ! | CAATGATACTTATTGTGTTT+GGG | - | chr5.3:24975052-24975071 | MS.gene58579:CDS | 25.0% |
| ! | CAATTCAATACTTAACACAA+TGG | + | chr5.3:24974432-24974451 | None:intergenic | 25.0% |
| ! | CAGAAGAAAACTACAAATAA+GGG | + | chr5.3:24974791-24974810 | None:intergenic | 25.0% |
| ! | GAATTTATAAAGCTAGAAAC+TGG | - | chr5.3:24975396-24975415 | MS.gene58579:intron | 25.0% |
| ! | GATAACCTATCCAAAATAAA+CGG | + | chr5.3:24973469-24973488 | None:intergenic | 25.0% |
| ! | GATTATTATACCCTAAAAAG+TGG | - | chr5.3:24976219-24976238 | MS.gene58579:CDS | 25.0% |
| ! | GTACAATACATTTCATCTAA+AGG | + | chr5.3:24974386-24974405 | None:intergenic | 25.0% |
| ! | TACAGTTAAACAAGAATTGT+AGG | - | chr5.3:24976197-24976216 | MS.gene58579:CDS | 25.0% |
| ! | TCAACTTAAATGCAAAATCT+AGG | - | chr5.3:24977077-24977096 | MS.gene58579:CDS | 25.0% |
| ! | TCAATGATACTTATTGTGTT+TGG | - | chr5.3:24975051-24975070 | MS.gene58579:CDS | 25.0% |
| ! | TCAGAAGAAAACTACAAATA+AGG | + | chr5.3:24974792-24974811 | None:intergenic | 25.0% |
| ! | TGAAGAAAAAGATGTGAAAT+TGG | - | chr5.3:24973347-24973366 | MS.gene58579:intron | 25.0% |
| ! | TGGAAGGTAAATTATTGAAT+TGG | - | chr5.3:24974108-24974127 | MS.gene58579:intron | 25.0% |
| ! | TGTGTTTAACAACTGATAAT+TGG | - | chr5.3:24976035-24976054 | MS.gene58579:CDS | 25.0% |
| ! | TTATTAAGTAAAAGTCGCAT+GGG | - | chr5.3:24976508-24976527 | MS.gene58579:intron | 25.0% |
| ! | TTCAGATCAGAAGAAAATAA+TGG | - | chr5.3:24972943-24972962 | MS.gene58579:intron | 25.0% |
| !! | AAAATATTTCTTTTCGGCAA+AGG | - | chr5.3:24976774-24976793 | MS.gene58579:CDS | 25.0% |
| !! | CGACTTTTACTTAATAATAG+AGG | + | chr5.3:24976505-24976524 | None:intergenic | 25.0% |
| !! | CTTTCAATTTTAAACATCAC+AGG | + | chr5.3:24974764-24974783 | None:intergenic | 25.0% |
| !! | GGTAAAATTTTCATATGAGA+GGG | - | chr5.3:24976240-24976259 | MS.gene58579:CDS | 25.0% |
| !! | GTAATGTTTCGGTTTAATTT+AGG | - | chr5.3:24975205-24975224 | MS.gene58579:CDS | 25.0% |
| !! | TAAGTTGAATTTAGAAAACC+TGG | + | chr5.3:24977065-24977084 | None:intergenic | 25.0% |
| !! | TGGTAAAATTTTCATATGAG+AGG | - | chr5.3:24976239-24976258 | MS.gene58579:CDS | 25.0% |
| !! | TTTATAGCTTTTGCTTAACA+TGG | - | chr5.3:24975334-24975353 | MS.gene58579:intron | 25.0% |
| !!! | AAACTACTTTTCATCACTTT+TGG | - | chr5.3:24975492-24975511 | MS.gene58579:intron | 25.0% |
| !!! | AAGAAGGTTTTTTAATCGTA+TGG | - | chr5.3:24974217-24974236 | MS.gene58579:intron | 25.0% |
| !!! | ATTTGATTTTGGTTGAACTT+TGG | + | chr5.3:24977017-24977036 | None:intergenic | 25.0% |
| !!! | GAACTTGTTTTTTATTTCGT+CGG | + | chr5.3:24976556-24976575 | None:intergenic | 25.0% |
| !!! | GAGATGATATTTTGAAAGAT+AGG | - | chr5.3:24975016-24975035 | MS.gene58579:intron | 25.0% |
| !!! | GGTCTTATTAATTAAGGATT+GGG | - | chr5.3:24976529-24976548 | MS.gene58579:intron | 25.0% |
| !!! | GGTTTGCTTTATTTCATATT+TGG | - | chr5.3:24973389-24973408 | MS.gene58579:intron | 25.0% |
| !!! | TCTGATTTAATGTCACTTTT+CGG | + | chr5.3:24974716-24974735 | None:intergenic | 25.0% |
| !!! | TTGGCACTTTTATTGTTTTA+TGG | - | chr5.3:24974127-24974146 | MS.gene58579:CDS | 25.0% |
| !!! | TTTTTCCTCTATTTTTCTTG+AGG | + | chr5.3:24974847-24974866 | None:intergenic | 25.0% |
| !!! | TTTTTTACATATATCCTGAC+AGG | - | chr5.3:24974027-24974046 | MS.gene58579:intron | 25.0% |
| AAAGCTAAAGCATGATTTCA+AGG | - | chr5.3:24975751-24975770 | MS.gene58579:intron | 30.0% | |
| AACAACTGATAATTGGAGTT+TGG | - | chr5.3:24976042-24976061 | MS.gene58579:CDS | 30.0% | |
| AACACAATAAGACCTTAGAA+TGG | + | chr5.3:24977162-24977181 | None:intergenic | 30.0% | |
| AAGCAAACCTTAGATTTCTT+TGG | + | chr5.3:24973378-24973397 | None:intergenic | 30.0% | |
| AATAATGGTATAGATCTGAG+CGG | - | chr5.3:24972958-24972977 | MS.gene58579:intron | 30.0% | |
| AGAATAGACATAAAAATGGG+AGG | + | chr5.3:24976308-24976327 | None:intergenic | 30.0% | |
| AGTGACATTAAATCAGAGAA+AGG | - | chr5.3:24974719-24974738 | MS.gene58579:intron | 30.0% | |
| ATAACTGCAGTTCATTGTTA+TGG | - | chr5.3:24973935-24973954 | MS.gene58579:intron | 30.0% | |
| ATCTCTCATTATGGATAGTA+TGG | - | chr5.3:24973791-24973810 | MS.gene58579:intron | 30.0% | |
| ATGATACTTATTGTGTTTGG+GGG | - | chr5.3:24975054-24975073 | MS.gene58579:CDS | 30.0% | |
| GAAGAAAACTACAAATAAGG+GGG | + | chr5.3:24974789-24974808 | None:intergenic | 30.0% | |
| GAATAGACATAAAAATGGGA+GGG | + | chr5.3:24976307-24976326 | None:intergenic | 30.0% | |
| GGAAAAACCTAATACAAAAG+TGG | - | chr5.3:24974860-24974879 | MS.gene58579:intron | 30.0% | |
| GTGACATTAAATCAGAGAAA+GGG | - | chr5.3:24974720-24974739 | MS.gene58579:intron | 30.0% | |
| GTTATGGATGGTGATAAATT+TGG | - | chr5.3:24973951-24973970 | MS.gene58579:intron | 30.0% | |
| TAATAGAAAATCACGGAATG+AGG | + | chr5.3:24974926-24974945 | None:intergenic | 30.0% | |
| TATGAGGAAATCTCTCATTA+TGG | - | chr5.3:24973782-24973801 | MS.gene58579:intron | 30.0% | |
| TCAGTAATAAAGCAGGTAAT+TGG | - | chr5.3:24973900-24973919 | MS.gene58579:intron | 30.0% | |
| TCTCTCATTATGGATAGTAT+GGG | - | chr5.3:24973792-24973811 | MS.gene58579:intron | 30.0% | |
| TCTTAACAACACATTGAAGA+AGG | - | chr5.3:24974201-24974220 | MS.gene58579:intron | 30.0% | |
| TCTTATCATATGCTTTGTCA+AGG | + | chr5.3:24974564-24974583 | None:intergenic | 30.0% | |
| TGGTGATAGTAATCAAGTTA+GGG | - | chr5.3:24976062-24976081 | MS.gene58579:CDS | 30.0% | |
| TTCATTGTCCTTACACTTAA+TGG | - | chr5.3:24977116-24977135 | MS.gene58579:CDS | 30.0% | |
| TTCCATATTCACATCTGAAA+TGG | - | chr5.3:24975868-24975887 | MS.gene58579:CDS | 30.0% | |
| TTCCATTTCAGATGTGAATA+TGG | + | chr5.3:24975873-24975892 | None:intergenic | 30.0% | |
| TTTCGTAAAGAACGAATGTT+TGG | + | chr5.3:24975561-24975580 | None:intergenic | 30.0% | |
| ! | ACTTGGTTAAAACTGTGTTT+TGG | - | chr5.3:24975127-24975146 | MS.gene58579:intron | 30.0% |
| ! | CATTATTTTCCCTATTCACA+GGG | + | chr5.3:24973491-24973510 | None:intergenic | 30.0% |
| ! | CTAAAAGCATAGGTTGAATA+TGG | - | chr5.3:24976662-24976681 | MS.gene58579:CDS | 30.0% |
| ! | GGAAAGTTATATGTTGCTTA+AGG | - | chr5.3:24975889-24975908 | MS.gene58579:intron | 30.0% |
| ! | TAGACTATCACTAAAAGCAT+AGG | - | chr5.3:24976652-24976671 | MS.gene58579:CDS | 30.0% |
| ! | TATCTCTCAGTATTCAAGTT+TGG | - | chr5.3:24976271-24976290 | MS.gene58579:CDS | 30.0% |
| ! | TATGCTTTTAGTGATAGTCT+AGG | + | chr5.3:24976653-24976672 | None:intergenic | 30.0% |
| ! | TGATAATGATTCACTGTCAT+GGG | - | chr5.3:24972747-24972766 | MS.gene58579:intron | 30.0% |
| ! | TTGGTGATAGTAATCAAGTT+AGG | - | chr5.3:24976061-24976080 | MS.gene58579:CDS | 30.0% |
| !! | AGAGTACCTTCAATTTTGTT+TGG | + | chr5.3:24974902-24974921 | None:intergenic | 30.0% |
| !! | CTTTCTACCACTTTTGTATT+AGG | + | chr5.3:24974870-24974889 | None:intergenic | 30.0% |
| !! | GATATTTTGAAAGATAGGCA+GGG | - | chr5.3:24975021-24975040 | MS.gene58579:intron | 30.0% |
| !! | GGGTCTTATTAATTAAGGAT+TGG | - | chr5.3:24976528-24976547 | MS.gene58579:intron | 30.0% |
| !! | TGATATTTTGAAAGATAGGC+AGG | - | chr5.3:24975020-24975039 | MS.gene58579:intron | 30.0% |
| !! | TTGATAATGATTCACTGTCA+TGG | - | chr5.3:24972746-24972765 | MS.gene58579:intron | 30.0% |
| !!! | ATTTCCCTTTTTAGTTGAAG+CGG | + | chr5.3:24973622-24973641 | None:intergenic | 30.0% |
| !!! | CTGATTTAATGTCACTTTTC+GGG | + | chr5.3:24974715-24974734 | None:intergenic | 30.0% |
| !!! | GATTACCGTTTATTTTGGAT+AGG | - | chr5.3:24973461-24973480 | MS.gene58579:intron | 30.0% |
| !!! | TGATTTAATGTCACTTTTCG+GGG | + | chr5.3:24974714-24974733 | None:intergenic | 30.0% |
| !!! | TTTTGTTTCTAGCTTCCTTT+TGG | - | chr5.3:24974249-24974268 | MS.gene58579:intron | 30.0% |
| ACAACTTTGCGGAAAGAAAA+TGG | - | chr5.3:24974088-24974107 | MS.gene58579:intron | 35.0% | |
| ACCACGATAAGAAGTTGTTA+GGG | + | chr5.3:24975783-24975802 | None:intergenic | 35.0% | |
| AGCTCATTACAAGAAGATTG+CGG | - | chr5.3:24972864-24972883 | MS.gene58579:intron | 35.0% | |
| AGTTTATAGAAGGGCTGATA+TGG | - | chr5.3:24975642-24975661 | MS.gene58579:intron | 35.0% | |
| ATAGGTTATCCCTGTGAATA+GGG | - | chr5.3:24973479-24973498 | MS.gene58579:intron | 35.0% | |
| ATATGCTTTGTCAAGGAAAG+AGG | + | chr5.3:24974557-24974576 | None:intergenic | 35.0% | |
| ATCAGCTCCAACTAAAACAT+TGG | - | chr5.3:24973590-24973609 | MS.gene58579:intron | 35.0% | |
| ATTGAACCATACAGTGTGTT+TGG | + | chr5.3:24975466-24975485 | None:intergenic | 35.0% | |
| CAAAACAAAGAAGAAACCAG+TGG | - | chr5.3:24973515-24973534 | MS.gene58579:intron | 35.0% | |
| CAAGTCGCAAATGATATTGT+TGG | + | chr5.3:24974351-24974370 | None:intergenic | 35.0% | |
| CAGATCTTCAGTAATAAAGC+AGG | - | chr5.3:24973893-24973912 | MS.gene58579:intron | 35.0% | |
| CATTTCCTATATTCCTGTGT+TGG | - | chr5.3:24974956-24974975 | MS.gene58579:intron | 35.0% | |
| CTAACATATCTCAACACAGA+AGG | - | chr5.3:24975709-24975728 | MS.gene58579:intron | 35.0% | |
| CTCTCATTATGGATAGTATG+GGG | - | chr5.3:24973793-24973812 | MS.gene58579:intron | 35.0% | |
| GGAGACATAAAAGTGATTGT+AGG | - | chr5.3:24975227-24975246 | MS.gene58579:CDS | 35.0% | |
| GGATCATCCAAAGAAATCTA+AGG | - | chr5.3:24973368-24973387 | MS.gene58579:intron | 35.0% | |
| GGTTTGATAAGAAATAGCAG+AGG | + | chr5.3:24976409-24976428 | None:intergenic | 35.0% | |
| GTTTATAGAAGGGCTGATAT+GGG | - | chr5.3:24975643-24975662 | MS.gene58579:intron | 35.0% | |
| TAAATCAGAGAAAGGGAAAG+CGG | - | chr5.3:24974727-24974746 | MS.gene58579:intron | 35.0% | |
| TAGAAAACCTGGTGTATGTT+TGG | + | chr5.3:24977054-24977073 | None:intergenic | 35.0% | |
| TCACATTGTACTCCATTCTA+AGG | - | chr5.3:24977147-24977166 | MS.gene58579:CDS | 35.0% | |
| TCAGTCCTCAAGAAAAATAG+AGG | - | chr5.3:24974839-24974858 | MS.gene58579:intron | 35.0% | |
| TCTCATTATGGATAGTATGG+GGG | - | chr5.3:24973794-24973813 | MS.gene58579:intron | 35.0% | |
| TGAAGATCTGTCTTCTTCTA+CGG | + | chr5.3:24973883-24973902 | None:intergenic | 35.0% | |
| TGTGTACAAAGAGACAGAAA+AGG | - | chr5.3:24973314-24973333 | MS.gene58579:intron | 35.0% | |
| TTACCAAAGTTCATCAGTTG+AGG | - | chr5.3:24973161-24973180 | MS.gene58579:intron | 35.0% | |
| TTCCAACTTCTACAACTTTG+CGG | - | chr5.3:24974077-24974096 | MS.gene58579:intron | 35.0% | |
| TTCTGTATTTCCAACACTCA+AGG | - | chr5.3:24973024-24973043 | MS.gene58579:intron | 35.0% | |
| ! | AAAAGTGATTGTAGGAGCAT+AGG | - | chr5.3:24975235-24975254 | MS.gene58579:CDS | 35.0% |
| ! | AATTGAATCTGCTTGCTAGT+TGG | - | chr5.3:24974511-24974530 | MS.gene58579:intron | 35.0% |
| ! | ATGCAAAATCTAGGTCTTGT+TGG | - | chr5.3:24977086-24977105 | MS.gene58579:CDS | 35.0% |
| ! | GCATTATTTTCCCTATTCAC+AGG | + | chr5.3:24973492-24973511 | None:intergenic | 35.0% |
| ! | TCAGTATTCAAGTTTGGAAG+AGG | - | chr5.3:24976277-24976296 | MS.gene58579:CDS | 35.0% |
| ! | TCTTCTTCTACGGAAGTTTT+TGG | + | chr5.3:24973873-24973892 | None:intergenic | 35.0% |
| ! | TTGGCTGGTTAAAATTCTTC+TGG | + | chr5.3:24973854-24973873 | None:intergenic | 35.0% |
| ! | TTTATGCACACGTCTTTTTC+AGG | + | chr5.3:24973240-24973259 | None:intergenic | 35.0% |
| !! | ATACATGATTGGTTTCACAG+TGG | + | chr5.3:24975620-24975639 | None:intergenic | 35.0% |
| !! | CGCATGGGTCTTATTAATTA+AGG | - | chr5.3:24976523-24976542 | MS.gene58579:intron | 35.0% |
| !! | TAGGAGCATAGGATTGATTT+TGG | - | chr5.3:24975246-24975265 | MS.gene58579:CDS | 35.0% |
| !! | TGGAAGTGTTGTACAAACTT+TGG | - | chr5.3:24974688-24974707 | MS.gene58579:intron | 35.0% |
| !! | TTGCAAGTGTCTGTTTCTTT+TGG | - | chr5.3:24972718-24972737 | MS.gene58579:intron | 35.0% |
| !!! | AGAGTGAGTTGATTGACTTT+TGG | + | chr5.3:24976971-24976990 | None:intergenic | 35.0% |
| !!! | CACTGGTTTCTTCTTTGTTT+TGG | + | chr5.3:24973517-24973536 | None:intergenic | 35.0% |
| AATCAAGTTAGGGAGACCTA+TGG | - | chr5.3:24976072-24976091 | MS.gene58579:CDS | 40.0% | |
| ACTGTCGACCATTAAGTGTA+AGG | + | chr5.3:24977127-24977146 | None:intergenic | 40.0% | |
| AGAGATTTCCTCATAGTACG+AGG | + | chr5.3:24973777-24973796 | None:intergenic | 40.0% | |
| AGGACATTGTCAGAACTCAA+TGG | + | chr5.3:24977185-24977204 | None:intergenic | 40.0% | |
| AGTTGAGGTGGAGAATAAAG+AGG | - | chr5.3:24973176-24973195 | MS.gene58579:intron | 40.0% | |
| ATAACCAAAACAAGACAGCC+AGG | + | chr5.3:24976100-24976119 | None:intergenic | 40.0% | |
| ATAAGAAGTTGTTAGGGGTG+TGG | + | chr5.3:24975777-24975796 | None:intergenic | 40.0% | |
| ATCAAAAAGTCGCGCAGAAA+AGG | - | chr5.3:24975811-24975830 | MS.gene58579:intron | 40.0% | |
| ATCAAGTTAGGGAGACCTAT+GGG | - | chr5.3:24976073-24976092 | MS.gene58579:CDS | 40.0% | |
| ATTTCGCAAAAATCACAGCG+CGG | + | chr5.3:24975443-24975462 | None:intergenic | 40.0% | |
| CATAGACATGTGCAAAGATC+TGG | + | chr5.3:24973703-24973722 | None:intergenic | 40.0% | |
| CCACGATAAGAAGTTGTTAG+GGG | + | chr5.3:24975782-24975801 | None:intergenic | 40.0% | |
| CGAAATCCAAACACACTGTA+TGG | - | chr5.3:24975457-24975476 | MS.gene58579:intron | 40.0% | |
| CTCAACACAGAAGGAAAAAG+AGG | - | chr5.3:24975718-24975737 | MS.gene58579:intron | 40.0% | |
| CTCTAATCCAAACATACACC+AGG | - | chr5.3:24977044-24977063 | MS.gene58579:CDS | 40.0% | |
| CTGCAGTTCATTGTTATGGA+TGG | - | chr5.3:24973939-24973958 | MS.gene58579:intron | 40.0% | |
| CTTCTCTTGAGCCAACAATT+CGG | + | chr5.3:24972899-24972918 | None:intergenic | 40.0% | |
| CTTGGTTGAAGTTCTCCAAA+AGG | + | chr5.3:24974267-24974286 | None:intergenic | 40.0% | |
| CTTTGCGGAAAGAAAATGGA+AGG | - | chr5.3:24974092-24974111 | MS.gene58579:intron | 40.0% | |
| GACCACGATAAGAAGTTGTT+AGG | + | chr5.3:24975784-24975803 | None:intergenic | 40.0% | |
| GAGAATAAAGAGGTGGAAAG+TGG | - | chr5.3:24973186-24973205 | MS.gene58579:intron | 40.0% | |
| GATAGGTTATCCCTGTGAAT+AGG | - | chr5.3:24973478-24973497 | MS.gene58579:intron | 40.0% | |
| GCAAGAAATTGAAATCAGCC+CGG | - | chr5.3:24973071-24973090 | MS.gene58579:intron | 40.0% | |
| GCAAGAGTAGTCATGAAAAC+AGG | + | chr5.3:24977205-24977224 | None:intergenic | 40.0% | |
| GCGTCTCCAAACAAAATTGA+AGG | - | chr5.3:24974893-24974912 | MS.gene58579:intron | 40.0% | |
| GGAATATGTGGTGACATGTT+TGG | - | chr5.3:24976688-24976707 | MS.gene58579:CDS | 40.0% | |
| TATGGATAGTATGGGGGATA+AGG | - | chr5.3:24973800-24973819 | MS.gene58579:intron | 40.0% | |
| TGAAGCCAACACAGGAATAT+AGG | + | chr5.3:24974964-24974983 | None:intergenic | 40.0% | |
| TTCCGCAAAGTTGTAGAAGT+TGG | + | chr5.3:24974082-24974101 | None:intergenic | 40.0% | |
| TTGCACATGTCTATGAGCTT+AGG | - | chr5.3:24973708-24973727 | MS.gene58579:intron | 40.0% | |
| ! | ATCTGCCGCTTCAACTAAAA+AGG | - | chr5.3:24973614-24973633 | MS.gene58579:intron | 40.0% |
| ! | CTTTTGGTCGAATTGAGGTT+TGG | - | chr5.3:24975508-24975527 | MS.gene58579:intron | 40.0% |
| ! | GTATTCAAGTTTGGAAGAGG+TGG | - | chr5.3:24976280-24976299 | MS.gene58579:CDS | 40.0% |
| ! | GTCGAAATTTGAGATGCCTT+AGG | + | chr5.3:24973549-24973568 | None:intergenic | 40.0% |
| ! | GTTTTCATGACTACTCTTGC+AGG | - | chr5.3:24977205-24977224 | MS.gene58579:CDS | 40.0% |
| ! | TCTGCCGCTTCAACTAAAAA+GGG | - | chr5.3:24973615-24973634 | MS.gene58579:intron | 40.0% |
| !! | AGAGGTTGATAGCATTGCTT+AGG | + | chr5.3:24976391-24976410 | None:intergenic | 40.0% |
| !! | AGGTTGATAGCATTGCTTAG+GGG | + | chr5.3:24976389-24976408 | None:intergenic | 40.0% |
| !! | CATCACTTTTGGTCGAATTG+AGG | - | chr5.3:24975503-24975522 | MS.gene58579:intron | 40.0% |
| !! | CGTGTGACATTTTGACATGA+GGG | + | chr5.3:24976354-24976373 | None:intergenic | 40.0% |
| !! | CTTTTGGAGAACTTCAACCA+AGG | - | chr5.3:24974265-24974284 | MS.gene58579:intron | 40.0% |
| !! | GAGGTTGATAGCATTGCTTA+GGG | + | chr5.3:24976390-24976409 | None:intergenic | 40.0% |
| !! | GATGTAGGCTTTGAACTTCT+CGG | + | chr5.3:24973573-24973592 | None:intergenic | 40.0% |
| !! | TCGTGTGACATTTTGACATG+AGG | + | chr5.3:24976355-24976374 | None:intergenic | 40.0% |
| !!! | GCAGATGCCAATGTTTTAGT+TGG | + | chr5.3:24973600-24973619 | None:intergenic | 40.0% |
| !!! | GTTTTAGTTGGAGCTGATGT+AGG | + | chr5.3:24973588-24973607 | None:intergenic | 40.0% |
| AACCAGTTCCTCGTACTATG+AGG | - | chr5.3:24973766-24973785 | MS.gene58579:intron | 45.0% | |
| ACCACCAACACATGCTCATT+TGG | + | chr5.3:24976144-24976163 | None:intergenic | 45.0% | |
| ATTACAAGAAGATTGCGGCC+CGG | - | chr5.3:24972869-24972888 | MS.gene58579:intron | 45.0% | |
| ATTCACTGTCATGGGAGAGA+TGG | - | chr5.3:24972755-24972774 | MS.gene58579:intron | 45.0% | |
| CACTTAAGTGAAGCCAACAC+AGG | + | chr5.3:24974972-24974991 | None:intergenic | 45.0% | |
| CCAAAGTTCATCAGTTGAGG+TGG | - | chr5.3:24973164-24973183 | MS.gene58579:intron | 45.0% | |
| CCACCTCAACTGATGAACTT+TGG | + | chr5.3:24973167-24973186 | None:intergenic | 45.0% | |
| CCCCTAACAACTTCTTATCG+TGG | - | chr5.3:24975779-24975798 | MS.gene58579:intron | 45.0% | |
| CGTTGAAGCTGAAGATGTGA+AGG | - | chr5.3:24973278-24973297 | MS.gene58579:intron | 45.0% | |
| GAAATTGAAATCAGCCCGGT+TGG | - | chr5.3:24973075-24973094 | MS.gene58579:intron | 45.0% | |
| GAATTCCGAATCAGTCTCAC+AGG | + | chr5.3:24973007-24973026 | None:intergenic | 45.0% | |
| GAGAGGATGGAGAAAAGAAG+TGG | - | chr5.3:24974668-24974687 | MS.gene58579:intron | 45.0% | |
| GAGGCAAGTTACTTCTAGTG+TGG | - | chr5.3:24973659-24973678 | MS.gene58579:intron | 45.0% | |
| GAGTCATGCGGATGATTTGA+AGG | - | chr5.3:24973110-24973129 | MS.gene58579:intron | 45.0% | |
| GATAGCATTGCTTAGGGGAA+TGG | + | chr5.3:24976384-24976403 | None:intergenic | 45.0% | |
| GGCTGATATGGGATATGAGT+TGG | - | chr5.3:24975654-24975673 | MS.gene58579:intron | 45.0% | |
| GGTACAACTACCTTGAGTGT+TGG | + | chr5.3:24973037-24973056 | None:intergenic | 45.0% | |
| GGTATAGATCTGAGCGGTAA+TGG | - | chr5.3:24972964-24972983 | MS.gene58579:intron | 45.0% | |
| GGTTCAGTAGTATGAGGAAC+TGG | + | chr5.3:24973750-24973769 | None:intergenic | 45.0% | |
| GTAGTATGAGGAACTGGATC+AGG | + | chr5.3:24973744-24973763 | None:intergenic | 45.0% | |
| TAACGCCTGTGAGACTGATT+CGG | - | chr5.3:24972999-24973018 | MS.gene58579:intron | 45.0% | |
| TCAAGAGAAGGAGATGGAGA+GGG | - | chr5.3:24972909-24972928 | MS.gene58579:intron | 45.0% | |
| TCATGCGGATGATTTGAAGG+AGG | - | chr5.3:24973113-24973132 | MS.gene58579:intron | 45.0% | |
| TGAGGTGGAGAATAAAGAGG+TGG | - | chr5.3:24973179-24973198 | MS.gene58579:intron | 45.0% | |
| TTCCTCATAGTACGAGGAAC+TGG | + | chr5.3:24973771-24973790 | None:intergenic | 45.0% | |
| TTCTTGCTTATCGCGTTCCT+CGG | + | chr5.3:24973058-24973077 | None:intergenic | 45.0% | |
| ! | AGTAACTTGCCTCCTAGGTA+AGG | + | chr5.3:24973652-24973671 | None:intergenic | 45.0% |
| ! | CTAGAAGTAACTTGCCTCCT+AGG | + | chr5.3:24973657-24973676 | None:intergenic | 45.0% |
| ! | GATCTGAGCGGTAATGGTAA+CGG | - | chr5.3:24972970-24972989 | MS.gene58579:intron | 45.0% |
| ! | GGAACTGGTTCAGTAGTATG+AGG | + | chr5.3:24973756-24973775 | None:intergenic | 45.0% |
| ! | TCTTTTCTCCATCCTCTCAG+CGG | + | chr5.3:24974666-24974685 | None:intergenic | 45.0% |
| ! | TTCTTCTGTGCTACTGATCC+AGG | + | chr5.3:24972832-24972851 | None:intergenic | 45.0% |
| !! | ATCTAGGTCTTGTTGGCTTC+TGG | - | chr5.3:24977093-24977112 | MS.gene58579:CDS | 45.0% |
| !! | CGAATTGTTGGCTCAAGAGA+AGG | - | chr5.3:24972897-24972916 | MS.gene58579:intron | 45.0% |
| !!! | CTTCTACGGAAGTTTTTGGC+TGG | + | chr5.3:24973869-24973888 | None:intergenic | 45.0% |
| AAGACTGAGAGCCGTCGATA+GGG | - | chr5.3:24977236-24977255 | MS.gene58579:CDS | 50.0% | |
| ACCAGTGGCAGCAAAACCTA+AGG | - | chr5.3:24973530-24973549 | MS.gene58579:intron | 50.0% | |
| AGCCAACAATTCGGCTTTCC+GGG | + | chr5.3:24972890-24972909 | None:intergenic | 50.0% | |
| CACTCAAGGTAGTTGTACCG+AGG | - | chr5.3:24973038-24973057 | MS.gene58579:intron | 50.0% | |
| CCAACACATGCTCATTTGGC+AGG | + | chr5.3:24976140-24976159 | None:intergenic | 50.0% | |
| CCTGCCAAATGAGCATGTGT+TGG | - | chr5.3:24976137-24976156 | MS.gene58579:CDS | 50.0% | |
| CTCAAGAGAAGGAGATGGAG+AGG | - | chr5.3:24972908-24972927 | MS.gene58579:intron | 50.0% | |
| GAAATCCGCAGTCCTTACCT+AGG | - | chr5.3:24973637-24973656 | MS.gene58579:intron | 50.0% | |
| GAGCCAACAATTCGGCTTTC+CGG | + | chr5.3:24972891-24972910 | None:intergenic | 50.0% | |
| GAGGTGGAAAGTGGATCACA+TGG | - | chr5.3:24973195-24973214 | MS.gene58579:intron | 50.0% | |
| GCCAAATGAGCATGTGTTGG+TGG | - | chr5.3:24976140-24976159 | MS.gene58579:CDS | 50.0% | |
| GGAACTGGATCAGGCTTACT+TGG | + | chr5.3:24973735-24973754 | None:intergenic | 50.0% | |
| GGATGATTTGAAGGAGGAGG+AGG | - | chr5.3:24973119-24973138 | MS.gene58579:intron | 50.0% | |
| TAAGACTGAGAGCCGTCGAT+AGG | - | chr5.3:24977235-24977254 | MS.gene58579:CDS | 50.0% | |
| TCAGAGAAAGGGAAAGCGGT+AGG | - | chr5.3:24974731-24974750 | MS.gene58579:intron | 50.0% | |
| TGATATCGGCAGGAGTCATG+CGG | - | chr5.3:24973098-24973117 | MS.gene58579:intron | 50.0% | |
| TGCGGATGATTTGAAGGAGG+AGG | - | chr5.3:24973116-24973135 | MS.gene58579:intron | 50.0% | |
| ! | GTTGAGAAGTGTGCTACACC+TGG | - | chr5.3:24972811-24972830 | MS.gene58579:intron | 50.0% |
| ! | GTTGGCTCAAGAGAAGGAGA+TGG | - | chr5.3:24972903-24972922 | MS.gene58579:intron | 50.0% |
| !! | ATCAGCCCGGTTGGTGATAT+CGG | - | chr5.3:24973084-24973103 | MS.gene58579:intron | 50.0% |
| ACAAGACAGCCAGGTCCCAT+AGG | + | chr5.3:24976091-24976110 | None:intergenic | 55.0% | |
| AGAAGGAGATGGAGAGGGAG+AGG | - | chr5.3:24972914-24972933 | MS.gene58579:intron | 55.0% | |
| ATCCGCAGTCCTTACCTAGG+AGG | - | chr5.3:24973640-24973659 | MS.gene58579:intron | 55.0% | |
| ATCCTGACAGGCTCCTCCAA+GGG | - | chr5.3:24974039-24974058 | MS.gene58579:intron | 55.0% | |
| CTCCTGCCGATATCACCAAC+CGG | + | chr5.3:24973093-24973112 | None:intergenic | 55.0% | |
| GAAGGAGATGGAGAGGGAGA+GGG | - | chr5.3:24972915-24972934 | MS.gene58579:intron | 55.0% | |
| GAAGGAGGAGGAGGAAGTTG+CGG | - | chr5.3:24973128-24973147 | MS.gene58579:intron | 55.0% | |
| TATCCTGACAGGCTCCTCCA+AGG | - | chr5.3:24974038-24974057 | MS.gene58579:intron | 55.0% | |
| TCCTGCCGATATCACCAACC+GGG | + | chr5.3:24973092-24973111 | None:intergenic | 55.0% | |
| TGCCTCCTAGGTAAGGACTG+CGG | + | chr5.3:24973645-24973664 | None:intergenic | 55.0% | |
| TTAGGGAGACCTATGGGACC+TGG | - | chr5.3:24976079-24976098 | MS.gene58579:CDS | 55.0% | |
| ! | GCCTTAGGTTTTGCTGCCAC+TGG | + | chr5.3:24973534-24973553 | None:intergenic | 55.0% |
| ! | GGAGGAGGAAGTTGCGGTTT+TGG | - | chr5.3:24973134-24973153 | MS.gene58579:intron | 55.0% |
| !!! | GGGACCTGGCTGTCTTGTTT+TGG | - | chr5.3:24976093-24976112 | MS.gene58579:CDS | 55.0% |
| ATAGGCCTGCTACCGCTGAG+AGG | - | chr5.3:24974651-24974670 | MS.gene58579:intron | 60.0% | |
| GGCCCGGAAAGCCGAATTGT+TGG | - | chr5.3:24972885-24972904 | MS.gene58579:intron | 60.0% | |
| TCCATCCTCTCAGCGGTAGC+AGG | + | chr5.3:24974659-24974678 | None:intergenic | 60.0% | |
| TCCTGACAGGCTCCTCCAAG+GGG | - | chr5.3:24974040-24974059 | MS.gene58579:intron | 60.0% | |
| ACCTTCGACGCAGTCCCCCT+TGG | + | chr5.3:24974058-24974077 | None:intergenic | 65.0% | |
| CCTGACAGGCTCCTCCAAGG+GGG | - | chr5.3:24974041-24974060 | MS.gene58579:intron | 65.0% | |
| GCCTGCTACCGCTGAGAGGA+TGG | - | chr5.3:24974655-24974674 | MS.gene58579:intron | 65.0% | |
| TCCAAGGGGGACTGCGTCGA+AGG | - | chr5.3:24974054-24974073 | MS.gene58579:intron | 65.0% | |
| TTCGACGCAGTCCCCCTTGG+AGG | + | chr5.3:24974055-24974074 | None:intergenic | 65.0% | |
| !! | GCCCGGTTGGTGATATCGGC+AGG | - | chr5.3:24973088-24973107 | MS.gene58579:intron | 65.0% |
| CCCCCTTGGAGGAGCCTGTC+AGG | + | chr5.3:24974044-24974063 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 24972688 | 24977256 | 24972688 | ID=MS.gene58579 |
| chr5.3 | mRNA | 24972688 | 24977256 | 24972688 | ID=MS.gene58579.t1;Parent=MS.gene58579 |
| chr5.3 | exon | 24976555 | 24977256 | 24976555 | ID=MS.gene58579.t1.exon1;Parent=MS.gene58579.t1 |
| chr5.3 | CDS | 24976555 | 24977256 | 24976555 | ID=cds.MS.gene58579.t1;Parent=MS.gene58579.t1 |
| chr5.3 | exon | 24976030 | 24976461 | 24976030 | ID=MS.gene58579.t1.exon2;Parent=MS.gene58579.t1 |
| chr5.3 | CDS | 24976030 | 24976461 | 24976030 | ID=cds.MS.gene58579.t1;Parent=MS.gene58579.t1 |
| chr5.3 | exon | 24975831 | 24975895 | 24975831 | ID=MS.gene58579.t1.exon3;Parent=MS.gene58579.t1 |
| chr5.3 | CDS | 24975831 | 24975895 | 24975831 | ID=cds.MS.gene58579.t1;Parent=MS.gene58579.t1 |
| chr5.3 | exon | 24975196 | 24975289 | 24975196 | ID=MS.gene58579.t1.exon4;Parent=MS.gene58579.t1 |
| chr5.3 | CDS | 24975196 | 24975289 | 24975196 | ID=cds.MS.gene58579.t1;Parent=MS.gene58579.t1 |
| chr5.3 | exon | 24975030 | 24975101 | 24975030 | ID=MS.gene58579.t1.exon5;Parent=MS.gene58579.t1 |
| chr5.3 | CDS | 24975030 | 24975101 | 24975030 | ID=cds.MS.gene58579.t1;Parent=MS.gene58579.t1 |
| chr5.3 | exon | 24974112 | 24974216 | 24974112 | ID=MS.gene58579.t1.exon6;Parent=MS.gene58579.t1 |
| chr5.3 | CDS | 24974112 | 24974216 | 24974112 | ID=cds.MS.gene58579.t1;Parent=MS.gene58579.t1 |
| chr5.3 | exon | 24972688 | 24972717 | 24972688 | ID=MS.gene58579.t1.exon7;Parent=MS.gene58579.t1 |
| chr5.3 | CDS | 24972688 | 24972717 | 24972688 | ID=cds.MS.gene58579.t1;Parent=MS.gene58579.t1 |
| Gene Sequence |
| Protein sequence |
