Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027590.t1 | XP_003613269.2 | 96.6 | 526 | 14 | 2 | 18 | 539 | 34 | 559 | 5.10E-234 | 820.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027590.t1 | G7K1H4 | 96.6 | 526 | 14 | 2 | 18 | 539 | 34 | 559 | 3.7e-234 | 820.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027590 | MS.gene038604 | PPI |
| MS.gene027590 | MS.gene71002 | PPI |
| MS.gene027590 | MS.gene070347 | PPI |
| MS.gene027590 | MS.gene009144 | PPI |
| MS.gene43884 | MS.gene027590 | PPI |
| MS.gene027590 | MS.gene027598 | PPI |
| MS.gene027590 | MS.gene45070 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027590.t1 | MTR_5g034750 | 96.402 | 528 | 15 | 2 | 16 | 539 | 32 | 559 | 0.0 | 1043 |
| MS.gene027590.t1 | MTR_8g063760 | 68.362 | 531 | 111 | 6 | 16 | 537 | 35 | 517 | 0.0 | 686 |
| MS.gene027590.t1 | MTR_6g007720 | 56.234 | 393 | 147 | 8 | 18 | 385 | 31 | 423 | 5.98e-135 | 411 |
| MS.gene027590.t1 | MTR_2g075860 | 41.509 | 371 | 184 | 10 | 21 | 386 | 35 | 377 | 5.74e-72 | 244 |
| MS.gene027590.t1 | MTR_5g034550 | 66.250 | 160 | 29 | 3 | 102 | 247 | 1 | 149 | 6.19e-60 | 199 |
| MS.gene027590.t1 | MTR_8g058630 | 60.432 | 139 | 54 | 1 | 104 | 242 | 13 | 150 | 1.19e-47 | 166 |
| MS.gene027590.t1 | MTR_8g063700 | 37.313 | 201 | 119 | 4 | 54 | 250 | 31 | 228 | 1.77e-32 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027590.t1 | AT1G70280 | 66.667 | 390 | 114 | 6 | 18 | 400 | 31 | 411 | 1.19e-172 | 506 |
| MS.gene027590.t1 | AT1G70280 | 67.877 | 358 | 99 | 6 | 50 | 400 | 1 | 349 | 1.24e-163 | 481 |
| MS.gene027590.t1 | AT1G23880 | 63.452 | 394 | 126 | 7 | 18 | 400 | 91 | 477 | 4.08e-162 | 481 |
| MS.gene027590.t1 | AT1G23880 | 64.804 | 358 | 114 | 5 | 50 | 400 | 1 | 353 | 3.55e-152 | 450 |
| MS.gene027590.t1 | AT5G14890 | 52.394 | 376 | 149 | 11 | 16 | 373 | 31 | 394 | 2.71e-113 | 352 |
| MS.gene027590.t1 | AT3G14860 | 41.758 | 364 | 188 | 9 | 10 | 369 | 31 | 374 | 1.02e-75 | 254 |
| MS.gene027590.t1 | AT3G14860 | 41.484 | 364 | 188 | 9 | 10 | 369 | 31 | 373 | 2.55e-75 | 253 |
| MS.gene027590.t1 | AT1G23890 | 45.455 | 198 | 94 | 6 | 25 | 220 | 6 | 191 | 1.21e-40 | 150 |
| MS.gene027590.t1 | AT1G23890 | 45.455 | 198 | 94 | 6 | 25 | 220 | 6 | 191 | 8.12e-40 | 152 |
Find 156 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGCATTTATTTGCCTTTC+AGG | 0.119350 | 5.1:-25639964 | None:intergenic |
| TTCTTAGGGGTTGGAGTTCT+TGG | 0.127961 | 5.1:-25640042 | None:intergenic |
| CTTCTCGGTGCTGGCTTCTT+TGG | 0.219575 | 5.1:+25639128 | MS.gene027590:CDS |
| TAGTGGAAATAATGGGTTTC+AGG | 0.231590 | 5.1:+25639893 | MS.gene027590:CDS |
| ATTAGGAAAATTAGCGATTC+AGG | 0.250879 | 5.1:+25638254 | MS.gene027590:CDS |
| GCAGATCCTGCCACAAGTTT+TGG | 0.290153 | 5.1:-25638113 | None:intergenic |
| CAAGGTAGAGCGCTCTATTA+TGG | 0.290949 | 5.1:+25640114 | MS.gene027590:CDS |
| TCAGGGGTTACGACAATTGC+TGG | 0.292338 | 5.1:+25638821 | MS.gene027590:intron |
| CAAGATTCAATTCTTGAATC+TGG | 0.293017 | 5.1:+25642772 | MS.gene027590:CDS |
| TTATTTGCCTTTCAGGTTGA+TGG | 0.296462 | 5.1:-25639957 | None:intergenic |
| TGACAGATTTCAACGGCTTT+TGG | 0.297398 | 5.1:-25639774 | None:intergenic |
| TGTTGCAGATATTATGAATA+TGG | 0.304153 | 5.1:+25638229 | MS.gene027590:CDS |
| GGCCATTCTCCATAGCTTCT+TGG | 0.304744 | 5.1:-25642693 | None:intergenic |
| GAAACCAATGAGATAGTATT+TGG | 0.308736 | 5.1:+25640435 | MS.gene027590:CDS |
| GGATCTGCTGAAGGATATTC+TGG | 0.315805 | 5.1:+25638128 | MS.gene027590:CDS |
| TAATGGGGAGCTTCTGATTC+CGG | 0.316909 | 5.1:+25637942 | MS.gene027590:CDS |
| TTTGCTCATTCTAAGAATAA+TGG | 0.328101 | 5.1:+25641771 | MS.gene027590:intron |
| CTTTCAGGTTGATGGAATAA+AGG | 0.334420 | 5.1:-25639949 | None:intergenic |
| GTCTGTAGTTATCAAGCCTT+TGG | 0.338039 | 5.1:+25640485 | MS.gene027590:CDS |
| GCAGTTGAGGTGTTGTCTAA+TGG | 0.342329 | 5.1:+25637925 | MS.gene027590:CDS |
| TAGAACAAATTGACGCATTC+CGG | 0.342828 | 5.1:-25642982 | None:intergenic |
| TCTTGCTGCTTTGAGAAGTT+AGG | 0.355967 | 5.1:-25642754 | None:intergenic |
| GTTATCAAGCCTTTGGATTA+CGG | 0.356811 | 5.1:+25640492 | MS.gene027590:CDS |
| GAAGGAGGCTCGTCTTCATT+TGG | 0.360866 | 5.1:-25640012 | None:intergenic |
| TCTTAGGGGTTGGAGTTCTT+GGG | 0.370584 | 5.1:-25640041 | None:intergenic |
| GGCCTCAGTAGTGGAAATAA+TGG | 0.375297 | 5.1:+25639885 | MS.gene027590:CDS |
| GGGAAGCTTCTTACCAATGC+TGG | 0.376253 | 5.1:+25639862 | MS.gene027590:CDS |
| GGGAAAATTAAGCCGTGGAG+GGG | 0.379756 | 5.1:+25638844 | MS.gene027590:CDS |
| GGAGCTTCTGATTCCGGATT+CGG | 0.391040 | 5.1:+25637948 | MS.gene027590:CDS |
| ATATTATGAATATGGCAATT+AGG | 0.393436 | 5.1:+25638237 | MS.gene027590:CDS |
| GTTCCCTACTTGTCATTGAC+AGG | 0.393882 | 5.1:+25638939 | MS.gene027590:CDS |
| CGAGTTTGAGAAGTTGGTTT+CGG | 0.398720 | 5.1:+25642942 | MS.gene027590:CDS |
| GGAGTTCTTGGGTCAATAGA+AGG | 0.407998 | 5.1:-25640030 | None:intergenic |
| AATTCTTGAATCTGGAATCA+TGG | 0.410069 | 5.1:+25642780 | MS.gene027590:CDS |
| GAAGGTCTCTTTGCATCCAT+TGG | 0.415306 | 5.1:+25639841 | MS.gene027590:CDS |
| CAGTTGAGGTGTTGTCTAAT+GGG | 0.419303 | 5.1:+25637926 | MS.gene027590:CDS |
| CTGTACCTGCTTTCACCAAA+TGG | 0.422982 | 5.1:+25637214 | MS.gene027590:CDS |
| ATTGCAATGCTTCTCGGTGC+TGG | 0.424767 | 5.1:+25639119 | MS.gene027590:CDS |
| TTCCAACTCCAAGTTTGATT+CGG | 0.425714 | 5.1:+25642908 | MS.gene027590:CDS |
| GGATATTCTGGACACGTTGA+TGG | 0.428902 | 5.1:+25638140 | MS.gene027590:CDS |
| GAATCATGGAGTGCAAGAAT+TGG | 0.428968 | 5.1:+25642794 | MS.gene027590:CDS |
| TGCACCAAATACTATCTCAT+TGG | 0.430196 | 5.1:-25640439 | None:intergenic |
| CTTTGAAATTCATAGCTTTG+CGG | 0.434942 | 5.1:-25639922 | None:intergenic |
| GACTTTGATGTGGTTTATGT+TGG | 0.436835 | 5.1:+25638908 | MS.gene027590:CDS |
| ACTCTTCGAGTTTGAGAAGT+TGG | 0.438987 | 5.1:+25642936 | MS.gene027590:CDS |
| ACAGGAATTGCAATGCTTCT+CGG | 0.439351 | 5.1:+25639113 | MS.gene027590:intron |
| GGAAAATTAAGCCGTGGAGG+GGG | 0.440670 | 5.1:+25638845 | MS.gene027590:CDS |
| CTTGCTGCTTTGAGAAGTTA+GGG | 0.442717 | 5.1:-25642753 | None:intergenic |
| TGGCTTCTTTGGTTATATGC+TGG | 0.442934 | 5.1:+25639139 | MS.gene027590:CDS |
| TGTTGAATGACAGCGATTGC+TGG | 0.443118 | 5.1:+25637823 | MS.gene027590:intron |
| CATCAACAGTAATCCCCTTC+GGG | 0.446147 | 5.1:-25638190 | None:intergenic |
| AAGTACAATTGTCGCATCTC+AGG | 0.448027 | 5.1:+25639181 | MS.gene027590:CDS |
| TAAAACATGTGTACAATGGA+TGG | 0.452424 | 5.1:+25640175 | MS.gene027590:CDS |
| CAGGGGTTACGACAATTGCT+GGG | 0.462604 | 5.1:+25638822 | MS.gene027590:intron |
| TCATCAACAGTAATCCCCTT+CGG | 0.464047 | 5.1:-25638191 | None:intergenic |
| CAGGTTGATGGAATAAAGGT+TGG | 0.464853 | 5.1:-25639945 | None:intergenic |
| TTTAAGTGAGAACACCCATT+TGG | 0.465712 | 5.1:-25637229 | None:intergenic |
| GGAAGCTTCTTACCAATGCT+GGG | 0.467300 | 5.1:+25639863 | MS.gene027590:CDS |
| ATTTGGTGCAGTGCAGGAAC+AGG | 0.468187 | 5.1:+25640452 | MS.gene027590:CDS |
| GACAACACCTCAACTGCATA+AGG | 0.472947 | 5.1:-25637919 | None:intergenic |
| ATGTTACTATTCTCCGAATC+CGG | 0.475317 | 5.1:-25637961 | None:intergenic |
| GACGCATTCCGGCGGAGTTG+TGG | 0.479807 | 5.1:-25642971 | None:intergenic |
| CACTACTGAGGCCCCAGCAT+TGG | 0.480624 | 5.1:-25639875 | None:intergenic |
| GGTGAAATAGATGAGGATAA+TGG | 0.481601 | 5.1:-25637075 | None:intergenic |
| TCAGTGAATGACTTACTTGC+AGG | 0.485027 | 5.1:-25637096 | None:intergenic |
| AGTGAAAACCGAATCAAACT+TGG | 0.486092 | 5.1:-25642916 | None:intergenic |
| AATGTGGAAACTGTGTTTGA+TGG | 0.487534 | 5.1:+25637877 | MS.gene027590:CDS |
| CGAACACAATTGATTGCCAT+TGG | 0.488308 | 5.1:-25643130 | None:intergenic |
| GCCTCAGTAGTGGAAATAAT+GGG | 0.496088 | 5.1:+25639886 | MS.gene027590:CDS |
| ATTGCAAATGTGCAGATAGC+AGG | 0.500557 | 5.1:+25638090 | MS.gene027590:intron |
| GATAGTATTTGGTGCAGTGC+AGG | 0.501838 | 5.1:+25640446 | MS.gene027590:CDS |
| AAGGTCTCTTTGCATCCATT+GGG | 0.503206 | 5.1:+25639842 | MS.gene027590:CDS |
| GTGTTTGATGGAAGCAAGCT+TGG | 0.504687 | 5.1:+25637889 | MS.gene027590:CDS |
| CTGAAAGGCAAATAAATGCT+TGG | 0.505359 | 5.1:+25639965 | MS.gene027590:CDS |
| AACCGAATCAAACTTGGAGT+TGG | 0.508017 | 5.1:-25642910 | None:intergenic |
| ATTACAAAACTTTCTTGCAC+AGG | 0.511415 | 5.1:-25639988 | None:intergenic |
| TCAGAATGAATTTGTTCCAC+CGG | 0.512395 | 5.1:-25643199 | None:intergenic |
| GAAAATTTAGCCTCTTCACT+TGG | 0.515319 | 5.1:-25638881 | None:intergenic |
| TTCTCCATAGCTTCTTGGAA+TGG | 0.515697 | 5.1:-25642688 | None:intergenic |
| TTCCAAGAAGCTATGGAGAA+TGG | 0.517210 | 5.1:+25642691 | MS.gene027590:CDS |
| TTATAAGATTCGTCTTCTGA+TGG | 0.521940 | 5.1:-25639811 | None:intergenic |
| TCTGCATTTGTATTTGATCC+CGG | 0.523868 | 5.1:+25643180 | MS.gene027590:CDS |
| TTCCCTACTTGTCATTGACA+GGG | 0.526010 | 5.1:+25638940 | MS.gene027590:CDS |
| AAGCAAAATGAACTTGATAG+AGG | 0.529744 | 5.1:-25643072 | None:intergenic |
| CTGTTGCGTTTGTTTCGAGA+TGG | 0.530587 | 5.1:+25643153 | MS.gene027590:CDS |
| TCGGTGTCTTTAATCATGAA+AGG | 0.531257 | 5.1:-25640072 | None:intergenic |
| CAATGCTGGGGCCTCAGTAG+TGG | 0.531836 | 5.1:+25639876 | MS.gene027590:CDS |
| CAGAATGAATTTGTTCCACC+GGG | 0.534223 | 5.1:-25643198 | None:intergenic |
| GGGGAAAATTAAGCCGTGGA+GGG | 0.534296 | 5.1:+25638843 | MS.gene027590:CDS |
| TGTACCTGCTTTCACCAAAT+GGG | 0.534825 | 5.1:+25637215 | MS.gene027590:CDS |
| AGCAGGCCAAAACTTGTGGC+AGG | 0.539310 | 5.1:+25638107 | MS.gene027590:CDS |
| CTTTATTCCATCAACCTGAA+AGG | 0.543035 | 5.1:+25639950 | MS.gene027590:CDS |
| GAATCTTATAAGCAAGAAGA+AGG | 0.549566 | 5.1:+25639823 | MS.gene027590:CDS |
| CTTCACTTGGTCCATCGACA+TGG | 0.549805 | 5.1:-25638868 | None:intergenic |
| GTAGAGCGCTCTATTATGGA+TGG | 0.553125 | 5.1:+25640118 | MS.gene027590:CDS |
| AACACCCATTTGGTGAAAGC+AGG | 0.559076 | 5.1:-25637219 | None:intergenic |
| ATCACCATTCCAAGAAGCTA+TGG | 0.560870 | 5.1:+25642684 | MS.gene027590:CDS |
| TGCTTAGAACTTCATCATCA+CGG | 0.563423 | 5.1:-25642624 | None:intergenic |
| TGTGCTTATCAATACGAAAG+TGG | 0.563775 | 5.1:+25639004 | MS.gene027590:CDS |
| TCGTCTTCTGATGGAATCAA+AGG | 0.565286 | 5.1:-25639802 | None:intergenic |
| TTGCGTTTGTTTCGAGATGG+TGG | 0.575384 | 5.1:+25643156 | MS.gene027590:CDS |
| TCTTCATCATCTGCGAAACA+AGG | 0.575393 | 5.1:-25642714 | None:intergenic |
| GTTGAATGACAGCGATTGCT+GGG | 0.577934 | 5.1:+25637824 | MS.gene027590:intron |
| AGTGCAGGAACAGGATGAGA+AGG | 0.580723 | 5.1:+25640461 | MS.gene027590:CDS |
| ATGGAAAATTAAGAGAGGCT+AGG | 0.581572 | 5.1:+25638159 | MS.gene027590:CDS |
| CCACTAAAACATGTGTACAA+TGG | 0.582133 | 5.1:+25640171 | MS.gene027590:CDS |
| CACATCAAAGTATTCGATCC+CGG | 0.589651 | 5.1:+25643021 | MS.gene027590:CDS |
| CATCTGTATAACGGATGGGT+CGG | 0.590072 | 5.1:+25640252 | MS.gene027590:CDS |
| GGCAACAACCACAACTCCGC+CGG | 0.590133 | 5.1:+25642963 | MS.gene027590:CDS |
| AACAAATTGACGCATTCCGG+CGG | 0.590504 | 5.1:-25642979 | None:intergenic |
| AATTGAGCCTTATGCAGTTG+AGG | 0.593409 | 5.1:+25637912 | MS.gene027590:CDS |
| AATGAACTTGATAGAGGTGA+GGG | 0.593748 | 5.1:-25643066 | None:intergenic |
| TCAATGATGAAGTTTGAGAG+TGG | 0.594836 | 5.1:+25637850 | MS.gene027590:CDS |
| GCGCTCTATTATGGATGGGA+AGG | 0.596345 | 5.1:+25640123 | MS.gene027590:CDS |
| AAAACATCTGTATAACGGAT+GGG | 0.597862 | 5.1:+25640323 | MS.gene027590:CDS |
| AAAACATGTGTACAATGGAT+GGG | 0.602015 | 5.1:+25640176 | MS.gene027590:CDS |
| GCTAGGATGAACCACCCGAA+GGG | 0.604085 | 5.1:+25638176 | MS.gene027590:CDS |
| CTGCAACATAGATATTTCCT+CGG | 0.604716 | 5.1:-25638214 | None:intergenic |
| GCGCAGCTGAATCTCCCTGA+TGG | 0.608680 | 5.1:-25638972 | None:intergenic |
| GAAGCTTCTTACCAATGCTG+GGG | 0.609183 | 5.1:+25639864 | MS.gene027590:CDS |
| CATCTGTATAACGGATGGGA+CGG | 0.609816 | 5.1:+25640327 | MS.gene027590:CDS |
| CCCTACTTGTCATTGACAGG+GGG | 0.613053 | 5.1:+25638942 | MS.gene027590:CDS |
| GGCTAGGATGAACCACCCGA+AGG | 0.615525 | 5.1:+25638175 | MS.gene027590:CDS |
| AAAACATCTGTATAACGGAT+GGG | 0.615653 | 5.1:+25640248 | MS.gene027590:CDS |
| CTTGTGGCAGGATCTGCTGA+AGG | 0.620300 | 5.1:+25638119 | MS.gene027590:CDS |
| AGATAGCAGGCCAAAACTTG+TGG | 0.620856 | 5.1:+25638103 | MS.gene027590:intron |
| TCGTAATCAGTATCATTCAT+CGG | 0.624454 | 5.1:+25640380 | MS.gene027590:CDS |
| CGGGATCGAATACTTTGATG+TGG | 0.626424 | 5.1:-25643020 | None:intergenic |
| AGAGAATCACCGTAATCCAA+AGG | 0.627579 | 5.1:-25640501 | None:intergenic |
| TAGAGCGCTCTATTATGGAT+GGG | 0.629076 | 5.1:+25640119 | MS.gene027590:CDS |
| AGGGGTTACGACAATTGCTG+GGG | 0.629419 | 5.1:+25638823 | MS.gene027590:intron |
| AAATGAACTTGATAGAGGTG+AGG | 0.633172 | 5.1:-25643067 | None:intergenic |
| TGTCGATGGACCAAGTGAAG+AGG | 0.634224 | 5.1:+25638871 | MS.gene027590:CDS |
| GCATTTGTATTTGATCCCGG+TGG | 0.636243 | 5.1:+25643183 | MS.gene027590:CDS |
| ACCCATTATTTCCACTACTG+AGG | 0.636531 | 5.1:-25639887 | None:intergenic |
| GAAATAGATGAGGATAATGG+TGG | 0.640252 | 5.1:-25637072 | None:intergenic |
| GGCGGTCTGACAGATTTCAA+CGG | 0.642172 | 5.1:-25639781 | None:intergenic |
| TACGAAAGTGGATTTCCACT+CGG | 0.643863 | 5.1:+25639016 | MS.gene027590:CDS |
| TCCCTACTTGTCATTGACAG+GGG | 0.647961 | 5.1:+25638941 | MS.gene027590:CDS |
| AAAATGCAACAATTGTGGCA+AGG | 0.653611 | 5.1:+25640096 | MS.gene027590:CDS |
| CATGTGTACAATGGATGGGA+AGG | 0.653998 | 5.1:+25640180 | MS.gene027590:CDS |
| CTAGGATGAACCACCCGAAG+GGG | 0.655646 | 5.1:+25638177 | MS.gene027590:CDS |
| ACTTGCAGGTGAAATAGATG+AGG | 0.661290 | 5.1:-25637082 | None:intergenic |
| ATTGGTAAGAAGCTTCCCAA+TGG | 0.665400 | 5.1:-25639857 | None:intergenic |
| TCTTCTGATGGAATCAAAGG+CGG | 0.665746 | 5.1:-25639799 | None:intergenic |
| CAACAGTAATCCCCTTCGGG+TGG | 0.668291 | 5.1:-25638187 | None:intergenic |
| CGTTGATGGAAAATTAAGAG+AGG | 0.669642 | 5.1:+25638154 | MS.gene027590:CDS |
| TTACTATGAGCAAAGTCGCG+AGG | 0.674883 | 5.1:+25640413 | MS.gene027590:CDS |
| TCTATGATCATCATAATATG+CGG | 0.675458 | 5.1:+25640523 | MS.gene027590:CDS |
| GTTCTTGGGTCAATAGAAGG+AGG | 0.680904 | 5.1:-25640027 | None:intergenic |
| GGGATTACTGTTGATGACCG+AGG | 0.686913 | 5.1:+25638197 | MS.gene027590:CDS |
| GTTTGAGAGTGGATACAATG+TGG | 0.694884 | 5.1:+25637861 | MS.gene027590:CDS |
| AGTTGAGGTGTTGTCTAATG+GGG | 0.701689 | 5.1:+25637927 | MS.gene027590:CDS |
| GGGGTTACGACAATTGCTGG+GGG | 0.722033 | 5.1:+25638824 | MS.gene027590:intron |
| AGTTGGAAACAAGAACGCAG+TGG | 0.728260 | 5.1:-25642893 | None:intergenic |
| ATCAAAGTATTCGATCCCGG+TGG | 0.756174 | 5.1:+25643024 | MS.gene027590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTGATAAATGAAAAAT+TGG | - | chr5.1:25637131-25637150 | None:intergenic | 10.0% |
| !! | AAATTGATAAATGAAAAATT+GGG | - | chr5.1:25637130-25637149 | None:intergenic | 10.0% |
| !! | GAAAATAATAATTAGATAAA+TGG | + | chr5.1:25641743-25641762 | MS.gene027590:intron | 10.0% |
| !!! | ATGAAACTTAATAATTTTAA+TGG | + | chr5.1:25642029-25642048 | MS.gene027590:intron | 10.0% |
| !!! | TGAAACTTAATAATTTTAAT+GGG | + | chr5.1:25642030-25642049 | MS.gene027590:intron | 10.0% |
| !!! | TTATAATGATTTCTTTTAAA+TGG | + | chr5.1:25640644-25640663 | MS.gene027590:intron | 10.0% |
| !! | AAAAAAACTTAAAATCGATT+TGG | - | chr5.1:25641530-25641549 | None:intergenic | 15.0% |
| !! | AAACTTGTAGTAAATTTAAA+CGG | - | chr5.1:25640957-25640976 | None:intergenic | 15.0% |
| !! | AGAATCTTAAAAACTAAATT+GGG | + | chr5.1:25641999-25642018 | MS.gene027590:intron | 15.0% |
| !! | TACTAGTGATATAAAATAAT+AGG | + | chr5.1:25641464-25641483 | MS.gene027590:intron | 15.0% |
| !! | TAGAATAGTCATAAATAAAT+CGG | + | chr5.1:25639422-25639441 | MS.gene027590:intron | 15.0% |
| !! | TATTAAAACTATATTGTATC+TGG | - | chr5.1:25637399-25637418 | None:intergenic | 15.0% |
| !!! | AAAAAACTTAAAATCGATTT+GGG | - | chr5.1:25641529-25641548 | None:intergenic | 15.0% |
| !!! | AGTTTTAATATATGTAGTTT+TGG | + | chr5.1:25637409-25637428 | MS.gene027590:intron | 15.0% |
| !!! | ATTAACTGTATTGTTTTTTA+CGG | - | chr5.1:25641230-25641249 | None:intergenic | 15.0% |
| !!! | CTATTATTTTTGTTTTGTTT+TGG | + | chr5.1:25637781-25637800 | MS.gene027590:intron | 15.0% |
| !!! | GATTTTTTTATTGGAATTAT+GGG | + | chr5.1:25641965-25641984 | MS.gene027590:intron | 15.0% |
| !!! | TGATTTTTTTATTGGAATTA+TGG | + | chr5.1:25641964-25641983 | MS.gene027590:intron | 15.0% |
| !!! | TTCTAAAATTCTTATTGATA+TGG | + | chr5.1:25642158-25642177 | MS.gene027590:intron | 15.0% |
| !!! | TTGTGTATTTTTTTTATTGA+AGG | + | chr5.1:25642057-25642076 | MS.gene027590:intron | 15.0% |
| !! | AAGAGTAAGAAATCTAAAAA+AGG | + | chr5.1:25641876-25641895 | MS.gene027590:intron | 20.0% |
| !! | ACAATTCATAATGAATTCTA+AGG | + | chr5.1:25642426-25642445 | MS.gene027590:intron | 20.0% |
| !! | ACATTATATCATTGTTTAAG+TGG | + | chr5.1:25641147-25641166 | MS.gene027590:intron | 20.0% |
| !! | ATATTATGAATATGGCAATT+AGG | + | chr5.1:25638237-25638256 | MS.gene027590:CDS | 20.0% |
| !! | ATCCAAAAACAAAATATGAT+TGG | + | chr5.1:25639459-25639478 | MS.gene027590:intron | 20.0% |
| !! | CAATTCATAATGAATTCTAA+GGG | + | chr5.1:25642427-25642446 | MS.gene027590:intron | 20.0% |
| !! | CTTCATATTAAAGTTGTATT+TGG | - | chr5.1:25637556-25637575 | None:intergenic | 20.0% |
| !! | GAGAATCTTAAAAACTAAAT+TGG | + | chr5.1:25641998-25642017 | MS.gene027590:intron | 20.0% |
| !! | GTTATAATTTGATTAATCTC+TGG | + | chr5.1:25638287-25638306 | MS.gene027590:intron | 20.0% |
| !! | TAAAAAAGGAATAATGATGT+TGG | + | chr5.1:25641890-25641909 | MS.gene027590:intron | 20.0% |
| !! | TAGAATTTAACATAATTGGA+TGG | - | chr5.1:25641605-25641624 | None:intergenic | 20.0% |
| !! | TATACAGTAAAAAATGTTTG+CGG | + | chr5.1:25640579-25640598 | MS.gene027590:intron | 20.0% |
| !! | TCATTTGTGTATATATGTAT+AGG | + | chr5.1:25638340-25638359 | MS.gene027590:intron | 20.0% |
| !! | TCCAATTATGTTAAATTCTA+AGG | + | chr5.1:25641605-25641624 | MS.gene027590:intron | 20.0% |
| !! | TTAGTAAAGTTAGTTAGAAT+TGG | + | chr5.1:25642306-25642325 | MS.gene027590:intron | 20.0% |
| !!! | AAAACCAAATTGAGTTTTTT+TGG | + | chr5.1:25641841-25641860 | MS.gene027590:intron | 20.0% |
| !!! | AATGATTTCTTTTAAATGGT+AGG | + | chr5.1:25640648-25640667 | MS.gene027590:intron | 20.0% |
| !!! | CTCAGTTTTGATTTTTTTAT+TGG | + | chr5.1:25641956-25641975 | MS.gene027590:intron | 20.0% |
| !!! | TACCAATCATATTTTGTTTT+TGG | - | chr5.1:25639464-25639483 | None:intergenic | 20.0% |
| !!! | TATTTAGAATAGATGCAAAA+AGG | - | chr5.1:25641194-25641213 | None:intergenic | 20.0% |
| !!! | TGCAATTTACATGTTATTTT+TGG | - | chr5.1:25638076-25638095 | None:intergenic | 20.0% |
| !!! | TTTTTTCAGACATTGTTAAT+GGG | + | chr5.1:25637178-25637197 | MS.gene027590:intron | 20.0% |
| ! | AAGCATTTGTAAGATTGTTT+GGG | + | chr5.1:25638500-25638519 | MS.gene027590:intron | 25.0% |
| ! | ACAGTTAATTTCGACAAAAT+TGG | + | chr5.1:25641241-25641260 | MS.gene027590:intron | 25.0% |
| ! | AGATATGAATGTTAAGATGA+AGG | + | chr5.1:25642086-25642105 | MS.gene027590:intron | 25.0% |
| ! | ATAGTTAGTTACAAGTAGTT+AGG | + | chr5.1:25642352-25642371 | MS.gene027590:intron | 25.0% |
| ! | ATCAAAACTGAGAAAATCAA+AGG | - | chr5.1:25641948-25641967 | None:intergenic | 25.0% |
| ! | ATCTAACCTATAAATATGAC+CGG | - | chr5.1:25637657-25637676 | None:intergenic | 25.0% |
| ! | ATTCCTGTAAATGTTTCTTT+AGG | + | chr5.1:25638413-25638432 | MS.gene027590:intron | 25.0% |
| ! | ATTCTTATTGATATGGTTAC+TGG | + | chr5.1:25642165-25642184 | MS.gene027590:intron | 25.0% |
| ! | CAACAAAAACATCTGTATAA+CGG | + | chr5.1:25640243-25640262 | MS.gene027590:CDS | 25.0% |
| ! | CATTGAATAATGAATGTATC+CGG | + | chr5.1:25637635-25637654 | MS.gene027590:intron | 25.0% |
| ! | GAACATTGAGCATAATTTAA+AGG | + | chr5.1:25640760-25640779 | MS.gene027590:intron | 25.0% |
| ! | GATACCATATCAGAAATAAT+AGG | - | chr5.1:25642517-25642536 | None:intergenic | 25.0% |
| ! | GCCTTAGAATTTAACATAAT+TGG | - | chr5.1:25641609-25641628 | None:intergenic | 25.0% |
| ! | GGAAAAACGTAAAACTTAAA+AGG | - | chr5.1:25641508-25641527 | None:intergenic | 25.0% |
| ! | TAAATGTTGTGCAACTTAAA+AGG | - | chr5.1:25641567-25641586 | None:intergenic | 25.0% |
| ! | TAAGCATTTGTAAGATTGTT+TGG | + | chr5.1:25638499-25638518 | MS.gene027590:intron | 25.0% |
| ! | TAGTTAGGTCTATCTATAAA+AGG | + | chr5.1:25642367-25642386 | MS.gene027590:intron | 25.0% |
| ! | TCTATGATCATCATAATATG+CGG | + | chr5.1:25640523-25640542 | MS.gene027590:CDS | 25.0% |
| ! | TGTTGCAGATATTATGAATA+TGG | + | chr5.1:25638229-25638248 | MS.gene027590:CDS | 25.0% |
| !! | AATTAAGATGTCTGTTTTCA+GGG | + | chr5.1:25638804-25638823 | MS.gene027590:intron | 25.0% |
| !! | ATGAAAGGATATGTTTTCTT+AGG | - | chr5.1:25640060-25640079 | None:intergenic | 25.0% |
| !! | ATTTTCTAATGACTTTGATG+TGG | + | chr5.1:25638898-25638917 | MS.gene027590:CDS | 25.0% |
| !! | CAGAAACTTATTTGTTTCTT+CGG | + | chr5.1:25640697-25640716 | MS.gene027590:intron | 25.0% |
| !! | GATATCTGTTTTCTCTTTTA+TGG | + | chr5.1:25638775-25638794 | MS.gene027590:intron | 25.0% |
| !! | GTGTTTGAATTTAAGAGTAT+TGG | - | chr5.1:25641643-25641662 | None:intergenic | 25.0% |
| !! | TGAAAGGATATGTTTTCTTA+GGG | - | chr5.1:25640059-25640078 | None:intergenic | 25.0% |
| !! | TGTTTTCTCTTTTATGGAAA+AGG | + | chr5.1:25638781-25638800 | MS.gene027590:intron | 25.0% |
| !! | TTGATTTTGCTAGATTTATC+AGG | + | chr5.1:25641315-25641334 | MS.gene027590:intron | 25.0% |
| !! | TTTGCTCATTCTAAGAATAA+TGG | + | chr5.1:25641771-25641790 | MS.gene027590:intron | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr5.1:25637729-25637710 | None:intergenic | 25.0% |
| !!! | AGATAGATCTATACCTTTTT+TGG | - | chr5.1:25637262-25637281 | None:intergenic | 25.0% |
| !!! | CTTTTTTCAGACATTGTTAA+TGG | + | chr5.1:25637177-25637196 | MS.gene027590:intron | 25.0% |
| !!! | GTATTACGTATTTGTTATGT+TGG | + | chr5.1:25640986-25641005 | MS.gene027590:intron | 25.0% |
| !!! | TTATACAGATGTTTTTGTTG+TGG | - | chr5.1:25640243-25640262 | None:intergenic | 25.0% |
| AAAACATGTGTACAATGGAT+GGG | + | chr5.1:25640176-25640195 | MS.gene027590:CDS | 30.0% | |
| AAATAAATCGGATAGACAGT+TGG | + | chr5.1:25639434-25639453 | MS.gene027590:intron | 30.0% | |
| AACTGTCTTGTAGAAATTCA+AGG | + | chr5.1:25638381-25638400 | MS.gene027590:intron | 30.0% | |
| AAGCAAAATGAACTTGATAG+AGG | - | chr5.1:25643075-25643094 | None:intergenic | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | - | chr5.1:25638547-25638566 | None:intergenic | 30.0% | |
| AATCATCTCATCAACTAGAA+AGG | + | chr5.1:25641690-25641709 | MS.gene027590:intron | 30.0% | |
| ACAAAAATGAGATGAACAAG+AGG | + | chr5.1:25641806-25641825 | MS.gene027590:CDS | 30.0% | |
| AGATTACATGAATGAGTACA+TGG | - | chr5.1:25642398-25642417 | None:intergenic | 30.0% | |
| AGGTAAATAAAACTAGTGAG+AGG | - | chr5.1:25641174-25641193 | None:intergenic | 30.0% | |
| ATAAGCTGAAAACAGCTTAT+GGG | - | chr5.1:25638546-25638565 | None:intergenic | 30.0% | |
| ATGTATCCGGTCATATTTAT+AGG | + | chr5.1:25637648-25637667 | MS.gene027590:intron | 30.0% | |
| ATTACAAAACTTTCTTGCAC+AGG | - | chr5.1:25639991-25640010 | None:intergenic | 30.0% | |
| ATTAGGAAAATTAGCGATTC+AGG | + | chr5.1:25638254-25638273 | MS.gene027590:CDS | 30.0% | |
| ATTTAAGCATGACCATCAAA+AGG | - | chr5.1:25640814-25640833 | None:intergenic | 30.0% | |
| CAAACCCTTGAATATAAGTT+TGG | - | chr5.1:25638439-25638458 | None:intergenic | 30.0% | |
| CAAGATTCAATTCTTGAATC+TGG | + | chr5.1:25642772-25642791 | MS.gene027590:CDS | 30.0% | |
| CTTAAACCAACTACCAAAAA+AGG | + | chr5.1:25637246-25637265 | MS.gene027590:CDS | 30.0% | |
| GAAACCAATGAGATAGTATT+TGG | + | chr5.1:25640435-25640454 | MS.gene027590:CDS | 30.0% | |
| GAATATAGCTATGAAGATCT+GGG | + | chr5.1:25642112-25642131 | MS.gene027590:intron | 30.0% | |
| GAATCTTATAAGCAAGAAGA+AGG | + | chr5.1:25639823-25639842 | MS.gene027590:CDS | 30.0% | |
| GATTGATAGGAAGAAACATA+GGG | - | chr5.1:25642457-25642476 | None:intergenic | 30.0% | |
| GTAAAACTTAAAAGGACCTT+AGG | - | chr5.1:25641500-25641519 | None:intergenic | 30.0% | |
| GTTGTTATAACTCTTCCTTT+CGG | + | chr5.1:25641034-25641053 | MS.gene027590:intron | 30.0% | |
| TAAAACATGTGTACAATGGA+TGG | + | chr5.1:25640175-25640194 | MS.gene027590:CDS | 30.0% | |
| TAACAACCATCATGTTTGAA+TGG | - | chr5.1:25641021-25641040 | None:intergenic | 30.0% | |
| TAGGCCAAACTTATATTCAA+GGG | + | chr5.1:25638432-25638451 | MS.gene027590:intron | 30.0% | |
| TATTGGAATTATGGGTTTGA+TGG | + | chr5.1:25641973-25641992 | MS.gene027590:intron | 30.0% | |
| TCCAGATTTCTTGAGAAAAA+AGG | + | chr5.1:25639514-25639533 | MS.gene027590:intron | 30.0% | |
| TCGTAATCAGTATCATTCAT+CGG | + | chr5.1:25640380-25640399 | MS.gene027590:CDS | 30.0% | |
| TGAATATAGCTATGAAGATC+TGG | + | chr5.1:25642111-25642130 | MS.gene027590:intron | 30.0% | |
| TGATTGATAGGAAGAAACAT+AGG | - | chr5.1:25642458-25642477 | None:intergenic | 30.0% | |
| TTAGGCCAAACTTATATTCA+AGG | + | chr5.1:25638431-25638450 | MS.gene027590:intron | 30.0% | |
| TTAGTACCATTCAAACATGA+TGG | + | chr5.1:25641012-25641031 | MS.gene027590:intron | 30.0% | |
| TTATAAGATTCGTCTTCTGA+TGG | - | chr5.1:25639814-25639833 | None:intergenic | 30.0% | |
| TTCAGTATCATACTTCAACA+AGG | - | chr5.1:25640881-25640900 | None:intergenic | 30.0% | |
| TTGAATGTAACCAAATGTGT+CGG | - | chr5.1:25639327-25639346 | None:intergenic | 30.0% | |
| ! | AAAAACATCTGTATAACGGA+TGG | + | chr5.1:25640247-25640266 | MS.gene027590:CDS | 30.0% |
| ! | AAGGCAAGATCAAGAAATTT+TGG | + | chr5.1:25640779-25640798 | MS.gene027590:intron | 30.0% |
| ! | AATTCATCTCATGCTTTTGT+AGG | + | chr5.1:25639711-25639730 | MS.gene027590:intron | 30.0% |
| ! | AATTCTTGAATCTGGAATCA+TGG | + | chr5.1:25642780-25642799 | MS.gene027590:CDS | 30.0% |
| ! | ATAGGAGAAGTATGATTGAT+AGG | - | chr5.1:25642470-25642489 | None:intergenic | 30.0% |
| ! | ATCTCTTTCATTTTCAGATC+TGG | + | chr5.1:25641663-25641682 | MS.gene027590:intron | 30.0% |
| ! | ATTAAGATGTCTGTTTTCAG+GGG | + | chr5.1:25638805-25638824 | MS.gene027590:intron | 30.0% |
| ! | CTTATATTCAAGGGTTTGTT+TGG | + | chr5.1:25638441-25638460 | MS.gene027590:intron | 30.0% |
| ! | GAAAGGATATGTTTTCTTAG+GGG | - | chr5.1:25640058-25640077 | None:intergenic | 30.0% |
| ! | GAATTAAGATGTCTGTTTTC+AGG | + | chr5.1:25638803-25638822 | MS.gene027590:intron | 30.0% |
| ! | TTCAATTTGTTTACACACCA+GGG | - | chr5.1:25640743-25640762 | None:intergenic | 30.0% |
| !! | AAAACATCTGTATAACGGAT+GGG | + | chr5.1:25640248-25640267 | MS.gene027590:CDS | 30.0% |
| !! | CGATCCTATTATTTCTGATA+TGG | + | chr5.1:25642510-25642529 | MS.gene027590:intron | 30.0% |
| !! | CTTTGAAATTCATAGCTTTG+CGG | - | chr5.1:25639925-25639944 | None:intergenic | 30.0% |
| !! | GTATAGTTAGTAGAAGTATC+TGG | + | chr5.1:25637357-25637376 | MS.gene027590:intron | 30.0% |
| !! | TAGATGTAGATTAGCTTCAT+AGG | - | chr5.1:25642488-25642507 | None:intergenic | 30.0% |
| !! | TGTTCATCTCATTTTTGTAC+TGG | - | chr5.1:25641804-25641823 | None:intergenic | 30.0% |
| !!! | AAGGAGGAAGATTTTTTGTA+AGG | - | chr5.1:25640862-25640881 | None:intergenic | 30.0% |
| !!! | CCACAATTGTTGCATTTTTT+CGG | - | chr5.1:25640094-25640113 | None:intergenic | 30.0% |
| !!! | GATTTGTTTTATTTACCGAG+TGG | - | chr5.1:25639034-25639053 | None:intergenic | 30.0% |
| !!! | TCCTTTTTTCTCAAGAAATC+TGG | - | chr5.1:25639518-25639537 | None:intergenic | 30.0% |
| !!! | TCTATACCTTTTTTGGTAGT+TGG | - | chr5.1:25637255-25637274 | None:intergenic | 30.0% |
| AAAATGCAACAATTGTGGCA+AGG | + | chr5.1:25640096-25640115 | MS.gene027590:CDS | 35.0% | |
| AAACTTAAAAGGACCTTAGG+AGG | - | chr5.1:25641497-25641516 | None:intergenic | 35.0% | |
| AAATGAACTTGATAGAGGTG+AGG | - | chr5.1:25643070-25643089 | None:intergenic | 35.0% | |
| AAGTTATCCTGGAAAGCTTA+TGG | - | chr5.1:25638571-25638590 | None:intergenic | 35.0% | |
| AATGAACTTGATAGAGGTGA+GGG | - | chr5.1:25643069-25643088 | None:intergenic | 35.0% | |
| AATGTGGAAACTGTGTTTGA+TGG | + | chr5.1:25637877-25637896 | MS.gene027590:CDS | 35.0% | |
| ACTGGTAGTTGTAAGTTTAG+TGG | + | chr5.1:25642183-25642202 | MS.gene027590:intron | 35.0% | |
| AGTATCATACTTCAACAAGG+AGG | - | chr5.1:25640878-25640897 | None:intergenic | 35.0% | |
| AGTGAAAACCGAATCAAACT+TGG | - | chr5.1:25642919-25642938 | None:intergenic | 35.0% | |
| ATCATTGTGATCTATCACTC+TGG | - | chr5.1:25637732-25637751 | None:intergenic | 35.0% | |
| ATGGAAAATTAAGAGAGGCT+AGG | + | chr5.1:25638159-25638178 | MS.gene027590:CDS | 35.0% | |
| ATGTTACTATTCTCCGAATC+CGG | - | chr5.1:25637964-25637983 | None:intergenic | 35.0% | |
| CAAGCATTTATTTGCCTTTC+AGG | - | chr5.1:25639967-25639986 | None:intergenic | 35.0% | |
| CCACTAAAACATGTGTACAA+TGG | + | chr5.1:25640171-25640190 | MS.gene027590:CDS | 35.0% | |
| CCGAAAAAATGCAACAATTG+TGG | + | chr5.1:25640091-25640110 | MS.gene027590:CDS | 35.0% | |
| CGCACCAAAAAAACTCAATT+TGG | - | chr5.1:25641848-25641867 | None:intergenic | 35.0% | |
| CTGAAAGGCAAATAAATGCT+TGG | + | chr5.1:25639965-25639984 | MS.gene027590:CDS | 35.0% | |
| CTGCAACATAGATATTTCCT+CGG | - | chr5.1:25638217-25638236 | None:intergenic | 35.0% | |
| CTGTATATACTCAGTACTTG+TGG | - | chr5.1:25640566-25640585 | None:intergenic | 35.0% | |
| CTTATTTCCATAAGCTTTCC+AGG | + | chr5.1:25638561-25638580 | MS.gene027590:intron | 35.0% | |
| CTTTATTCCATCAACCTGAA+AGG | + | chr5.1:25639950-25639969 | MS.gene027590:CDS | 35.0% | |
| GAAAAAAGAAACGTCTCTAG+AGG | - | chr5.1:25638322-25638341 | None:intergenic | 35.0% | |
| GAAAATTTAGCCTCTTCACT+TGG | - | chr5.1:25638884-25638903 | None:intergenic | 35.0% | |
| GACTTTGATGTGGTTTATGT+TGG | + | chr5.1:25638908-25638927 | MS.gene027590:CDS | 35.0% | |
| GGTGAAATAGATGAGGATAA+TGG | - | chr5.1:25637078-25637097 | None:intergenic | 35.0% | |
| GTTATCAAGCCTTTGGATTA+CGG | + | chr5.1:25640492-25640511 | MS.gene027590:CDS | 35.0% | |
| TACATGAATGAGTACATGGT+AGG | - | chr5.1:25642394-25642413 | None:intergenic | 35.0% | |
| TAGAACAAATTGACGCATTC+CGG | - | chr5.1:25642985-25643004 | None:intergenic | 35.0% | |
| TCAATGATGAAGTTTGAGAG+TGG | + | chr5.1:25637850-25637869 | MS.gene027590:CDS | 35.0% | |
| TCTGCATTTGTATTTGATCC+CGG | + | chr5.1:25643180-25643199 | MS.gene027590:CDS | 35.0% | |
| TGAATCGCAAAAATTACCAC+CGG | - | chr5.1:25643043-25643062 | None:intergenic | 35.0% | |
| TGCACCAAATACTATCTCAT+TGG | - | chr5.1:25640442-25640461 | None:intergenic | 35.0% | |
| TGCTTAGAACTTCATCATCA+CGG | - | chr5.1:25642627-25642646 | None:intergenic | 35.0% | |
| TGGCCTAAAGAAACATTTAC+AGG | - | chr5.1:25638419-25638438 | None:intergenic | 35.0% | |
| TGTGCTTATCAATACGAAAG+TGG | + | chr5.1:25639004-25639023 | MS.gene027590:CDS | 35.0% | |
| TTCCAACTCCAAGTTTGATT+CGG | + | chr5.1:25642908-25642927 | MS.gene027590:CDS | 35.0% | |
| TTGCAATTCCTGTAGATTGA+AGG | - | chr5.1:25639106-25639125 | None:intergenic | 35.0% | |
| TTTAAGTGAGAACACCCATT+TGG | - | chr5.1:25637232-25637251 | None:intergenic | 35.0% | |
| TTTAGTATCAATCTCGTGTC+CGG | - | chr5.1:25637319-25637338 | None:intergenic | 35.0% | |
| ! | CGTTGATGGAAAATTAAGAG+AGG | + | chr5.1:25638154-25638173 | MS.gene027590:CDS | 35.0% |
| ! | GAAATAGATGAGGATAATGG+TGG | - | chr5.1:25637075-25637094 | None:intergenic | 35.0% |
| ! | GTTCAATTTGTTTACACACC+AGG | - | chr5.1:25640744-25640763 | None:intergenic | 35.0% |
| ! | TCAGAATGAATTTGTTCCAC+CGG | - | chr5.1:25643202-25643221 | None:intergenic | 35.0% |
| ! | TCGGTGTCTTTAATCATGAA+AGG | - | chr5.1:25640075-25640094 | None:intergenic | 35.0% |
| !! | AAGAGTATTGGTCTTGAACT+TGG | - | chr5.1:25641631-25641650 | None:intergenic | 35.0% |
| !! | AGACAGTTGTGTTCTAGTTT+AGG | - | chr5.1:25638369-25638388 | None:intergenic | 35.0% |
| !! | ATGCTAGCTTTAGAGAACAA+AGG | - | chr5.1:25639638-25639657 | None:intergenic | 35.0% |
| !! | CCATTGTACACATGTTTTAG+TGG | - | chr5.1:25640174-25640193 | None:intergenic | 35.0% |
| !! | CTTTCAGGTTGATGGAATAA+AGG | - | chr5.1:25639952-25639971 | None:intergenic | 35.0% |
| !! | GATCTTCCTCAACTGTTTTT+CGG | + | chr5.1:25642820-25642839 | MS.gene027590:CDS | 35.0% |
| !! | GCTGTTTTCATAAGTTATCC+TGG | - | chr5.1:25638582-25638601 | None:intergenic | 35.0% |
| !! | TAGTGGAAATAATGGGTTTC+AGG | + | chr5.1:25639893-25639912 | MS.gene027590:CDS | 35.0% |
| !! | TTATTTGCCTTTCAGGTTGA+TGG | - | chr5.1:25639960-25639979 | None:intergenic | 35.0% |
| !! | TTTTGGTTGTGATGTGGAAT+TGG | + | chr5.1:25637798-25637817 | MS.gene027590:intron | 35.0% |
| !!! | GTTTTGTTTTGGTTGTGATG+TGG | + | chr5.1:25637792-25637811 | MS.gene027590:intron | 35.0% |
| AACCGAATCAAACTTGGAGT+TGG | - | chr5.1:25642913-25642932 | None:intergenic | 40.0% | |
| AAGGTCTCTTTGCATCCATT+GGG | + | chr5.1:25639842-25639861 | MS.gene027590:CDS | 40.0% | |
| AAGTACAATTGTCGCATCTC+AGG | + | chr5.1:25639181-25639200 | MS.gene027590:CDS | 40.0% | |
| AATAGGCCAAATACCTCCTA+AGG | + | chr5.1:25641481-25641500 | MS.gene027590:intron | 40.0% | |
| AATGAATCTCCAATAGGGGA+GGG | + | chr5.1:25640603-25640622 | MS.gene027590:intron | 40.0% | |
| ACAGGAATTGCAATGCTTCT+CGG | + | chr5.1:25639113-25639132 | MS.gene027590:intron | 40.0% | |
| ACCCATTATTTCCACTACTG+AGG | - | chr5.1:25639890-25639909 | None:intergenic | 40.0% | |
| ACTACAATACATGCTCCGAA+AGG | - | chr5.1:25641052-25641071 | None:intergenic | 40.0% | |
| ACTTGCAGGTGAAATAGATG+AGG | - | chr5.1:25637085-25637104 | None:intergenic | 40.0% | |
| AGAGAATCACCGTAATCCAA+AGG | - | chr5.1:25640504-25640523 | None:intergenic | 40.0% | |
| AGTGTATGCCTTCAATCTAC+AGG | + | chr5.1:25639095-25639114 | MS.gene027590:intron | 40.0% | |
| ATAAGGTGAAGTTACCGCAT+TGG | - | chr5.1:25638025-25638044 | None:intergenic | 40.0% | |
| ATCACCATTCCAAGAAGCTA+TGG | + | chr5.1:25642684-25642703 | MS.gene027590:CDS | 40.0% | |
| ATCTGGGTTTGAACTCATTG+TGG | + | chr5.1:25642128-25642147 | MS.gene027590:intron | 40.0% | |
| ATTGCAAATGTGCAGATAGC+AGG | + | chr5.1:25638090-25638109 | MS.gene027590:intron | 40.0% | |
| ATTGGTAAGAAGCTTCCCAA+TGG | - | chr5.1:25639860-25639879 | None:intergenic | 40.0% | |
| CACGTGTATTAGTGTCTTGT+TGG | + | chr5.1:25637527-25637546 | MS.gene027590:intron | 40.0% | |
| CACTATAGATTGATGCGCAA+CGG | - | chr5.1:25642549-25642568 | None:intergenic | 40.0% | |
| CCAGTTTCGTCATACTTAGA+GGG | + | chr5.1:25642263-25642282 | MS.gene027590:intron | 40.0% | |
| CGAACACAATTGATTGCCAT+TGG | - | chr5.1:25643133-25643152 | None:intergenic | 40.0% | |
| CGGTAATGAATCTCCAATAG+GGG | + | chr5.1:25640599-25640618 | MS.gene027590:intron | 40.0% | |
| GAATCATGGAGTGCAAGAAT+TGG | + | chr5.1:25642794-25642813 | MS.gene027590:CDS | 40.0% | |
| GAATCGCAAAAATTACCACC+GGG | - | chr5.1:25643042-25643061 | None:intergenic | 40.0% | |
| GAGCAATGAGTGAGATCATA+AGG | - | chr5.1:25638042-25638061 | None:intergenic | 40.0% | |
| GCGGTAATGAATCTCCAATA+GGG | + | chr5.1:25640598-25640617 | MS.gene027590:intron | 40.0% | |
| GTCTGTAGTTATCAAGCCTT+TGG | + | chr5.1:25640485-25640504 | MS.gene027590:CDS | 40.0% | |
| GTTTGAGAGTGGATACAATG+TGG | + | chr5.1:25637861-25637880 | MS.gene027590:CDS | 40.0% | |
| TAATGAATCTCCAATAGGGG+AGG | + | chr5.1:25640602-25640621 | MS.gene027590:intron | 40.0% | |
| TATAACACTGACACCTCAGA+TGG | + | chr5.1:25639278-25639297 | MS.gene027590:intron | 40.0% | |
| TCAGTGAATGACTTACTTGC+AGG | - | chr5.1:25637099-25637118 | None:intergenic | 40.0% | |
| TCATCAACAGTAATCCCCTT+CGG | - | chr5.1:25638194-25638213 | None:intergenic | 40.0% | |
| TCCAGTTTCGTCATACTTAG+AGG | + | chr5.1:25642262-25642281 | MS.gene027590:intron | 40.0% | |
| TCGTCTTCTGATGGAATCAA+AGG | - | chr5.1:25639805-25639824 | None:intergenic | 40.0% | |
| TCTACGTGTCAATGTAGTCT+CGG | - | chr5.1:25637465-25637484 | None:intergenic | 40.0% | |
| TCTACTTTGAACAGCAGAGT+TGG | + | chr5.1:25638728-25638747 | MS.gene027590:intron | 40.0% | |
| TCTTCATCATCTGCGAAACA+AGG | - | chr5.1:25642717-25642736 | None:intergenic | 40.0% | |
| TCTTCTGATGGAATCAAAGG+CGG | - | chr5.1:25639802-25639821 | None:intergenic | 40.0% | |
| TGCGGTAATGAATCTCCAAT+AGG | + | chr5.1:25640597-25640616 | MS.gene027590:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | - | chr5.1:25637596-25637615 | None:intergenic | 40.0% | |
| TGGAATTATGGGTTTGATGG+AGG | + | chr5.1:25641976-25641995 | MS.gene027590:intron | 40.0% | |
| TGGCTTCTTTGGTTATATGC+TGG | + | chr5.1:25639139-25639158 | MS.gene027590:CDS | 40.0% | |
| TGTACCTGCTTTCACCAAAT+GGG | + | chr5.1:25637215-25637234 | MS.gene027590:CDS | 40.0% | |
| TTCCAAGAAGCTATGGAGAA+TGG | + | chr5.1:25642691-25642710 | MS.gene027590:CDS | 40.0% | |
| TTCCCTACTTGTCATTGACA+GGG | + | chr5.1:25638940-25638959 | MS.gene027590:CDS | 40.0% | |
| TTCTCCATAGCTTCTTGGAA+TGG | - | chr5.1:25642691-25642710 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | - | chr5.1:25637597-25637616 | None:intergenic | 40.0% | |
| ! | AACGGCTTTTGGTAAAGACT+CGG | - | chr5.1:25639766-25639785 | None:intergenic | 40.0% |
| ! | AATTGAGCCTTATGCAGTTG+AGG | + | chr5.1:25637912-25637931 | MS.gene027590:CDS | 40.0% |
| ! | ACTCTTCGAGTTTGAGAAGT+TGG | + | chr5.1:25642936-25642955 | MS.gene027590:CDS | 40.0% |
| ! | ATGATGTTGGTGTGTTGTTG+TGG | + | chr5.1:25641903-25641922 | MS.gene027590:intron | 40.0% |
| ! | ATTTTCGTGCTCGATTCCAA+TGG | + | chr5.1:25643114-25643133 | MS.gene027590:CDS | 40.0% |
| ! | CACATCAAAGTATTCGATCC+CGG | + | chr5.1:25643021-25643040 | MS.gene027590:CDS | 40.0% |
| ! | CAGAATGAATTTGTTCCACC+GGG | - | chr5.1:25643201-25643220 | None:intergenic | 40.0% |
| ! | CATGCCAATCTAAAGCCAAA+AGG | - | chr5.1:25642242-25642261 | None:intergenic | 40.0% |
| ! | CGAGTTTGAGAAGTTGGTTT+CGG | + | chr5.1:25642942-25642961 | MS.gene027590:CDS | 40.0% |
| ! | GCCTCAGTAGTGGAAATAAT+GGG | + | chr5.1:25639886-25639905 | MS.gene027590:CDS | 40.0% |
| ! | GGATATGTTTTCTTAGGGGT+TGG | - | chr5.1:25640054-25640073 | None:intergenic | 40.0% |
| ! | TACGAAAGTGGATTTCCACT+CGG | + | chr5.1:25639016-25639035 | MS.gene027590:CDS | 40.0% |
| ! | TAGAGCGCTCTATTATGGAT+GGG | + | chr5.1:25640119-25640138 | MS.gene027590:CDS | 40.0% |
| ! | TGACAGATTTCAACGGCTTT+TGG | - | chr5.1:25639777-25639796 | None:intergenic | 40.0% |
| ! | TGCTGTTGTTGTTGTTGTTG+CGG | - | chr5.1:25640294-25640313 | None:intergenic | 40.0% |
| ! | TGGTACGCTATTCCTTTTGA+TGG | + | chr5.1:25640799-25640818 | MS.gene027590:intron | 40.0% |
| !! | AAAGGACCTTAGGAGGTATT+TGG | - | chr5.1:25641490-25641509 | None:intergenic | 40.0% |
| !! | AGTTGAGGTGTTGTCTAATG+GGG | + | chr5.1:25637927-25637946 | MS.gene027590:CDS | 40.0% |
| !! | CAGGTTGATGGAATAAAGGT+TGG | - | chr5.1:25639948-25639967 | None:intergenic | 40.0% |
| !! | CAGTTGAGGTGTTGTCTAAT+GGG | + | chr5.1:25637926-25637945 | MS.gene027590:CDS | 40.0% |
| !! | CTTGCTGCTTTGAGAAGTTA+GGG | - | chr5.1:25642756-25642775 | None:intergenic | 40.0% |
| !! | TATTCTATGAAGCACCGACA+CGG | - | chr5.1:25639409-25639428 | None:intergenic | 40.0% |
| !! | TCTTGCTGCTTTGAGAAGTT+AGG | - | chr5.1:25642757-25642776 | None:intergenic | 40.0% |
| !!! | GCAACCTTTTGGCTTTAGAT+TGG | + | chr5.1:25642235-25642254 | MS.gene027590:intron | 40.0% |
| !!! | GTGTGTTGTTGTGGTTTTGA+TGG | + | chr5.1:25641912-25641931 | MS.gene027590:intron | 40.0% |
| !!! | GTTATTTTTGGCCTGCTAGT+AGG | - | chr5.1:25638064-25638083 | None:intergenic | 40.0% |
| AACAAATTGACGCATTCCGG+CGG | - | chr5.1:25642982-25643001 | None:intergenic | 45.0% | |
| AGATAGCAGGCCAAAACTTG+TGG | + | chr5.1:25638103-25638122 | MS.gene027590:intron | 45.0% | |
| AGTTGGAAACAAGAACGCAG+TGG | - | chr5.1:25642896-25642915 | None:intergenic | 45.0% | |
| CATCAACAGTAATCCCCTTC+GGG | - | chr5.1:25638193-25638212 | None:intergenic | 45.0% | |
| CATGTGTACAATGGATGGGA+AGG | + | chr5.1:25640180-25640199 | MS.gene027590:CDS | 45.0% | |
| CCCTCTAAGTATGACGAAAC+TGG | - | chr5.1:25642266-25642285 | None:intergenic | 45.0% | |
| CGGGATCGAATACTTTGATG+TGG | - | chr5.1:25643023-25643042 | None:intergenic | 45.0% | |
| CTCATTGTAGCTGCATGACA+TGG | + | chr5.1:25639554-25639573 | MS.gene027590:intron | 45.0% | |
| CTGTACCTGCTTTCACCAAA+TGG | + | chr5.1:25637214-25637233 | MS.gene027590:CDS | 45.0% | |
| CTGTTGCGTTTGTTTCGAGA+TGG | + | chr5.1:25643153-25643172 | MS.gene027590:CDS | 45.0% | |
| GAAGCTTCTTACCAATGCTG+GGG | + | chr5.1:25639864-25639883 | MS.gene027590:CDS | 45.0% | |
| GAAGGTCTCTTTGCATCCAT+TGG | + | chr5.1:25639841-25639860 | MS.gene027590:CDS | 45.0% | |
| GACAACACCTCAACTGCATA+AGG | - | chr5.1:25637922-25637941 | None:intergenic | 45.0% | |
| GCATTTGTATTTGATCCCGG+TGG | + | chr5.1:25643183-25643202 | MS.gene027590:CDS | 45.0% | |
| GGAAGCTTCTTACCAATGCT+GGG | + | chr5.1:25639863-25639882 | MS.gene027590:CDS | 45.0% | |
| GGAGTTCTTGGGTCAATAGA+AGG | - | chr5.1:25640033-25640052 | None:intergenic | 45.0% | |
| GGATATTCTGGACACGTTGA+TGG | + | chr5.1:25638140-25638159 | MS.gene027590:CDS | 45.0% | |
| GGATCTGCTGAAGGATATTC+TGG | + | chr5.1:25638128-25638147 | MS.gene027590:CDS | 45.0% | |
| GTGACACCGAAAAACAGTTG+AGG | - | chr5.1:25642829-25642848 | None:intergenic | 45.0% | |
| GTGTTTGATGGAAGCAAGCT+TGG | + | chr5.1:25637889-25637908 | MS.gene027590:CDS | 45.0% | |
| GTTCCCTACTTGTCATTGAC+AGG | + | chr5.1:25638939-25638958 | MS.gene027590:CDS | 45.0% | |
| GTTCTTGGGTCAATAGAAGG+AGG | - | chr5.1:25640030-25640049 | None:intergenic | 45.0% | |
| GTTGAATGACAGCGATTGCT+GGG | + | chr5.1:25637824-25637843 | MS.gene027590:intron | 45.0% | |
| GTTGTGTAAGTGTGCCAATG+CGG | + | chr5.1:25638008-25638027 | MS.gene027590:intron | 45.0% | |
| GTTTCGTCATACTTAGAGGG+AGG | + | chr5.1:25642266-25642285 | MS.gene027590:intron | 45.0% | |
| TAATGGGGAGCTTCTGATTC+CGG | + | chr5.1:25637942-25637961 | MS.gene027590:CDS | 45.0% | |
| TCCCTACTTGTCATTGACAG+GGG | + | chr5.1:25638941-25638960 | MS.gene027590:CDS | 45.0% | |
| TCTTAGGGGTTGGAGTTCTT+GGG | - | chr5.1:25640044-25640063 | None:intergenic | 45.0% | |
| TGTTGAATGACAGCGATTGC+TGG | + | chr5.1:25637823-25637842 | MS.gene027590:intron | 45.0% | |
| TTACTATGAGCAAAGTCGCG+AGG | + | chr5.1:25640413-25640432 | MS.gene027590:CDS | 45.0% | |
| TTCTTAGGGGTTGGAGTTCT+TGG | - | chr5.1:25640045-25640064 | None:intergenic | 45.0% | |
| TTGATTTCACCCTCCCCTAT+TGG | - | chr5.1:25640615-25640634 | None:intergenic | 45.0% | |
| TTGCGTTTGTTTCGAGATGG+TGG | + | chr5.1:25643156-25643175 | MS.gene027590:CDS | 45.0% | |
| TTGTTGCTACATACTCCCTC+CGG | + | chr5.1:25637578-25637597 | MS.gene027590:intron | 45.0% | |
| ! | AACACCCATTTGGTGAAAGC+AGG | - | chr5.1:25637222-25637241 | None:intergenic | 45.0% |
| ! | ATCAAAGTATTCGATCCCGG+TGG | + | chr5.1:25643024-25643043 | MS.gene027590:CDS | 45.0% |
| ! | CAAGGTAGAGCGCTCTATTA+TGG | + | chr5.1:25640114-25640133 | MS.gene027590:CDS | 45.0% |
| ! | GGCCTCAGTAGTGGAAATAA+TGG | + | chr5.1:25639885-25639904 | MS.gene027590:CDS | 45.0% |
| ! | GTAGAGCGCTCTATTATGGA+TGG | + | chr5.1:25640118-25640137 | MS.gene027590:CDS | 45.0% |
| !! | ATTCTATGAAGCACCGACAC+GGG | - | chr5.1:25639408-25639427 | None:intergenic | 45.0% |
| !! | CAAATGTGTCGGTGTCGTAT+CGG | - | chr5.1:25639316-25639335 | None:intergenic | 45.0% |
| !! | CATCTGTATAACGGATGGGA+CGG | + | chr5.1:25640327-25640346 | MS.gene027590:CDS | 45.0% |
| !! | CATCTGTATAACGGATGGGT+CGG | + | chr5.1:25640252-25640271 | MS.gene027590:CDS | 45.0% |
| !! | GATAGTATTTGGTGCAGTGC+AGG | + | chr5.1:25640446-25640465 | MS.gene027590:CDS | 45.0% |
| !! | GCAGTTGAGGTGTTGTCTAA+TGG | + | chr5.1:25637925-25637944 | MS.gene027590:CDS | 45.0% |
| !! | TGAGTGCTTGTCTAGTTCTC+TGG | + | chr5.1:25639216-25639235 | MS.gene027590:intron | 45.0% |
| !! | AAAATAATAATTAGATAAAT+GGG | + | chr5.1:25641744-25641763 | MS.gene027590:intron | 5.0% |
| AGGGGTTACGACAATTGCTG+GGG | + | chr5.1:25638823-25638842 | MS.gene027590:intron | 50.0% | |
| AGTGCAGGAACAGGATGAGA+AGG | + | chr5.1:25640461-25640480 | MS.gene027590:CDS | 50.0% | |
| CACCAGGGCGACTGAAAATT+TGG | - | chr5.1:25640728-25640747 | None:intergenic | 50.0% | |
| CACTCATTGCTCCTACTAGC+AGG | + | chr5.1:25638050-25638069 | MS.gene027590:intron | 50.0% | |
| CAGGGGTTACGACAATTGCT+GGG | + | chr5.1:25638822-25638841 | MS.gene027590:intron | 50.0% | |
| CCCCCTGTCAATGACAAGTA+GGG | - | chr5.1:25638945-25638964 | None:intergenic | 50.0% | |
| CCCTACTTGTCATTGACAGG+GGG | + | chr5.1:25638942-25638961 | MS.gene027590:CDS | 50.0% | |
| CGATACGACACCGACACATT+TGG | + | chr5.1:25639314-25639333 | MS.gene027590:intron | 50.0% | |
| CTTCACTTGGTCCATCGACA+TGG | - | chr5.1:25638871-25638890 | None:intergenic | 50.0% | |
| GAAGGAGGCTCGTCTTCATT+TGG | - | chr5.1:25640015-25640034 | None:intergenic | 50.0% | |
| GCGCTCTATTATGGATGGGA+AGG | + | chr5.1:25640123-25640142 | MS.gene027590:CDS | 50.0% | |
| GGAAAATTAAGCCGTGGAGG+GGG | + | chr5.1:25638845-25638864 | MS.gene027590:CDS | 50.0% | |
| GGAGCTTCTGATTCCGGATT+CGG | + | chr5.1:25637948-25637967 | MS.gene027590:CDS | 50.0% | |
| GGCCATTCTCCATAGCTTCT+TGG | - | chr5.1:25642696-25642715 | None:intergenic | 50.0% | |
| GGCGGTCTGACAGATTTCAA+CGG | - | chr5.1:25639784-25639803 | None:intergenic | 50.0% | |
| GGGAAAATTAAGCCGTGGAG+GGG | + | chr5.1:25638844-25638863 | MS.gene027590:CDS | 50.0% | |
| GGGAAGCTTCTTACCAATGC+TGG | + | chr5.1:25639862-25639881 | MS.gene027590:CDS | 50.0% | |
| GGGGAAAATTAAGCCGTGGA+GGG | + | chr5.1:25638843-25638862 | MS.gene027590:CDS | 50.0% | |
| TAGTGGAGTCATTCCCACGT+TGG | + | chr5.1:25642200-25642219 | MS.gene027590:intron | 50.0% | |
| TCAGGGGTTACGACAATTGC+TGG | + | chr5.1:25638821-25638840 | MS.gene027590:intron | 50.0% | |
| TCCCCCTGTCAATGACAAGT+AGG | - | chr5.1:25638946-25638965 | None:intergenic | 50.0% | |
| TGTCGATGGACCAAGTGAAG+AGG | + | chr5.1:25638871-25638890 | MS.gene027590:CDS | 50.0% | |
| ! | ATTGCAATGCTTCTCGGTGC+TGG | + | chr5.1:25639119-25639138 | MS.gene027590:CDS | 50.0% |
| ! | GCAGATCCTGCCACAAGTTT+TGG | - | chr5.1:25638116-25638135 | None:intergenic | 50.0% |
| ! | TGCCAAATTTTCAGTCGCCC+TGG | + | chr5.1:25640723-25640742 | MS.gene027590:intron | 50.0% |
| !! | ATTTGGTGCAGTGCAGGAAC+AGG | + | chr5.1:25640452-25640471 | MS.gene027590:CDS | 50.0% |
| !! | CAAAGCACTGACACAGACAC+CGG | + | chr5.1:25637297-25637316 | MS.gene027590:intron | 50.0% |
| !! | GGGATTACTGTTGATGACCG+AGG | + | chr5.1:25638197-25638216 | MS.gene027590:CDS | 50.0% |
| ACAGGGGGAATCAAGCCATC+AGG | + | chr5.1:25638957-25638976 | MS.gene027590:CDS | 55.0% | |
| AGCAGGCCAAAACTTGTGGC+AGG | + | chr5.1:25638107-25638126 | MS.gene027590:CDS | 55.0% | |
| CAACAGTAATCCCCTTCGGG+TGG | - | chr5.1:25638190-25638209 | None:intergenic | 55.0% | |
| CAGGGGGAATCAAGCCATCA+GGG | + | chr5.1:25638958-25638977 | MS.gene027590:CDS | 55.0% | |
| CTAGGATGAACCACCCGAAG+GGG | + | chr5.1:25638177-25638196 | MS.gene027590:CDS | 55.0% | |
| CTTGTGGCAGGATCTGCTGA+AGG | + | chr5.1:25638119-25638138 | MS.gene027590:CDS | 55.0% | |
| GAGTCATTCCCACGTTGGTG+CGG | + | chr5.1:25642205-25642224 | MS.gene027590:intron | 55.0% | |
| GCTAGGATGAACCACCCGAA+GGG | + | chr5.1:25638176-25638195 | MS.gene027590:CDS | 55.0% | |
| GCTGGGGGAAAATTAAGCCG+TGG | + | chr5.1:25638839-25638858 | MS.gene027590:CDS | 55.0% | |
| GGGGGAAAATTAAGCCGTGG+AGG | + | chr5.1:25638842-25638861 | MS.gene027590:CDS | 55.0% | |
| GGGGTTACGACAATTGCTGG+GGG | + | chr5.1:25638824-25638843 | MS.gene027590:intron | 55.0% | |
| TCCAGTGTTTGTGCCCGTGT+CGG | + | chr5.1:25639392-25639411 | MS.gene027590:intron | 55.0% | |
| ! | GCGGCGTATTCGCAACCTTT+TGG | + | chr5.1:25642224-25642243 | MS.gene027590:intron | 55.0% |
| !! | CTTCTCGGTGCTGGCTTCTT+TGG | + | chr5.1:25639128-25639147 | MS.gene027590:CDS | 55.0% |
| ACCGACACGGGCACAAACAC+TGG | - | chr5.1:25639396-25639415 | None:intergenic | 60.0% | |
| CAATGCTGGGGCCTCAGTAG+TGG | + | chr5.1:25639876-25639895 | MS.gene027590:CDS | 60.0% | |
| CACTACTGAGGCCCCAGCAT+TGG | - | chr5.1:25639878-25639897 | None:intergenic | 60.0% | |
| CGAATACGCCGCACCAACGT+GGG | - | chr5.1:25642216-25642235 | None:intergenic | 60.0% | |
| GACACCAGACACGCCATCTG+AGG | - | chr5.1:25639294-25639313 | None:intergenic | 60.0% | |
| GACACCTCAGATGGCGTGTC+TGG | + | chr5.1:25639287-25639306 | MS.gene027590:intron | 60.0% | |
| GCGCAGCTGAATCTCCCTGA+TGG | - | chr5.1:25638975-25638994 | None:intergenic | 60.0% | |
| GGCAACAACCACAACTCCGC+CGG | + | chr5.1:25642963-25642982 | MS.gene027590:CDS | 60.0% | |
| GGCTAGGATGAACCACCCGA+AGG | + | chr5.1:25638175-25638194 | MS.gene027590:CDS | 60.0% | |
| CATCGACATGGCCCCCTCCA+CGG | - | chr5.1:25638859-25638878 | None:intergenic | 65.0% | |
| GACGCATTCCGGCGGAGTTG+TGG | - | chr5.1:25642974-25642993 | None:intergenic | 65.0% | |
| GCGAATACGCCGCACCAACG+TGG | - | chr5.1:25642217-25642236 | None:intergenic | 65.0% | |
| CGTGGAGGGGGCCATGTCGA+TGG | + | chr5.1:25638857-25638876 | MS.gene027590:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 25637058 | 25643221 | 25637058 | ID=MS.gene027590 |
| chr5.1 | mRNA | 25637058 | 25643221 | 25637058 | ID=MS.gene027590.t1;Parent=MS.gene027590 |
| chr5.1 | exon | 25637058 | 25637106 | 25637058 | ID=MS.gene027590.t1.exon1;Parent=MS.gene027590.t1 |
| chr5.1 | CDS | 25637058 | 25637106 | 25637058 | ID=cds.MS.gene027590.t1;Parent=MS.gene027590.t1 |
| chr5.1 | exon | 25637187 | 25637267 | 25637187 | ID=MS.gene027590.t1.exon2;Parent=MS.gene027590.t1 |
| chr5.1 | CDS | 25637187 | 25637267 | 25637187 | ID=cds.MS.gene027590.t1;Parent=MS.gene027590.t1 |
| chr5.1 | exon | 25637836 | 25638012 | 25637836 | ID=MS.gene027590.t1.exon3;Parent=MS.gene027590.t1 |
| chr5.1 | CDS | 25637836 | 25638012 | 25637836 | ID=cds.MS.gene027590.t1;Parent=MS.gene027590.t1 |
| chr5.1 | exon | 25638105 | 25638275 | 25638105 | ID=MS.gene027590.t1.exon4;Parent=MS.gene027590.t1 |
| chr5.1 | CDS | 25638105 | 25638275 | 25638105 | ID=cds.MS.gene027590.t1;Parent=MS.gene027590.t1 |
| chr5.1 | exon | 25638825 | 25639037 | 25638825 | ID=MS.gene027590.t1.exon5;Parent=MS.gene027590.t1 |
| chr5.1 | CDS | 25638825 | 25639037 | 25638825 | ID=cds.MS.gene027590.t1;Parent=MS.gene027590.t1 |
| chr5.1 | exon | 25639117 | 25639205 | 25639117 | ID=MS.gene027590.t1.exon6;Parent=MS.gene027590.t1 |
| chr5.1 | CDS | 25639117 | 25639205 | 25639117 | ID=cds.MS.gene027590.t1;Parent=MS.gene027590.t1 |
| chr5.1 | exon | 25639733 | 25640568 | 25639733 | ID=MS.gene027590.t1.exon7;Parent=MS.gene027590.t1 |
| chr5.1 | CDS | 25639733 | 25640568 | 25639733 | ID=cds.MS.gene027590.t1;Parent=MS.gene027590.t1 |
| chr5.1 | exon | 25641786 | 25641827 | 25641786 | ID=MS.gene027590.t1.exon8;Parent=MS.gene027590.t1 |
| chr5.1 | CDS | 25641786 | 25641827 | 25641786 | ID=cds.MS.gene027590.t1;Parent=MS.gene027590.t1 |
| chr5.1 | exon | 25642567 | 25643221 | 25642567 | ID=MS.gene027590.t1.exon9;Parent=MS.gene027590.t1 |
| chr5.1 | CDS | 25642567 | 25643221 | 25642567 | ID=cds.MS.gene027590.t1;Parent=MS.gene027590.t1 |
| Gene Sequence |
| Protein sequence |
