Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038604.t1 | XP_013445926.1 | 98.7 | 521 | 5 | 1 | 1 | 519 | 1 | 521 | 4.90E-265 | 923.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038604.t1 | A0A072TSZ3 | 98.7 | 521 | 5 | 1 | 1 | 519 | 1 | 521 | 3.6e-265 | 923.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027598 | MS.gene038604 | PPI |
| MS.gene038604 | MS.gene45070 | PPI |
| MS.gene027590 | MS.gene038604 | PPI |
| MS.gene45070 | MS.gene038604 | PPI |
| MS.gene43884 | MS.gene038604 | PPI |
| MS.gene71002 | MS.gene038604 | PPI |
| MS.gene009144 | MS.gene038604 | PPI |
| MS.gene070347 | MS.gene038604 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038604.t1 | MTR_8g063760 | 98.084 | 522 | 6 | 3 | 1 | 519 | 1 | 521 | 0.0 | 1046 |
| MS.gene038604.t1 | MTR_5g034750 | 68.421 | 551 | 113 | 8 | 22 | 519 | 18 | 560 | 0.0 | 709 |
| MS.gene038604.t1 | MTR_6g007720 | 48.264 | 576 | 225 | 12 | 1 | 519 | 1 | 560 | 3.61e-170 | 493 |
| MS.gene038604.t1 | MTR_2g075860 | 40.513 | 390 | 196 | 9 | 7 | 394 | 10 | 365 | 6.60e-79 | 256 |
| MS.gene038604.t1 | MTR_5g034550 | 63.750 | 160 | 33 | 3 | 119 | 264 | 1 | 149 | 3.26e-58 | 190 |
| MS.gene038604.t1 | MTR_8g058630 | 58.993 | 139 | 56 | 1 | 121 | 259 | 13 | 150 | 1.15e-48 | 165 |
| MS.gene038604.t1 | MTR_8g063700 | 38.916 | 203 | 113 | 6 | 71 | 267 | 31 | 228 | 2.50e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038604.t1 | AT1G70280 | 65.245 | 469 | 140 | 5 | 24 | 488 | 20 | 469 | 0.0 | 567 |
| MS.gene038604.t1 | AT1G23880 | 60.656 | 488 | 162 | 8 | 1 | 485 | 61 | 521 | 0.0 | 557 |
| MS.gene038604.t1 | AT1G70280 | 66.432 | 426 | 120 | 5 | 67 | 488 | 1 | 407 | 0.0 | 526 |
| MS.gene038604.t1 | AT1G23880 | 62.381 | 420 | 134 | 5 | 67 | 485 | 1 | 397 | 4.26e-174 | 497 |
| MS.gene038604.t1 | AT5G14890 | 47.843 | 510 | 197 | 14 | 22 | 517 | 23 | 477 | 1.19e-142 | 419 |
| MS.gene038604.t1 | AT3G14860 | 39.949 | 393 | 190 | 11 | 6 | 394 | 24 | 374 | 4.05e-75 | 246 |
| MS.gene038604.t1 | AT3G14860 | 39.440 | 393 | 191 | 10 | 6 | 394 | 24 | 373 | 4.25e-75 | 246 |
| MS.gene038604.t1 | AT1G23890 | 48.023 | 177 | 87 | 4 | 63 | 237 | 18 | 191 | 1.71e-42 | 152 |
| MS.gene038604.t1 | AT1G23890 | 49.412 | 170 | 81 | 4 | 70 | 237 | 25 | 191 | 1.93e-41 | 153 |
Find 124 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTTCAGAACTTGTTTC+TGG | 0.022910 | 8.3:+38543562 | MS.gene038604:intron |
| CTTGTTGGGGCTGGTTTCTT+TGG | 0.229956 | 8.3:+38546154 | MS.gene038604:CDS |
| TTCATTCTTCATATTCTCTT+TGG | 0.235810 | 8.3:+38543410 | MS.gene038604:CDS |
| CAGGAATTGCAATGCTTGTT+GGG | 0.255059 | 8.3:+38546140 | MS.gene038604:intron |
| TGTTGCAGATACTGCAAATA+TGG | 0.266517 | 8.3:+38545602 | MS.gene038604:CDS |
| AAGCAGGAAGAAAGTTTCTT+TGG | 0.273520 | 8.3:+38546621 | MS.gene038604:CDS |
| TCCATATTCCATACCAGTTT+TGG | 0.280048 | 8.3:-38543644 | None:intergenic |
| TCAGTGTTTGCCTTTGAAAT+TGG | 0.298813 | 8.3:-38546740 | None:intergenic |
| TCACTTGCTTCTGAGATTGT+TGG | 0.308982 | 8.3:-38546764 | None:intergenic |
| CAGAGGAAACCAAGCCATTA+GGG | 0.312716 | 8.3:+38545953 | MS.gene038604:CDS |
| GGATCAGCTGAAGGATATTC+TGG | 0.315805 | 8.3:+38545501 | MS.gene038604:CDS |
| CAACAATTGCTGGAGGAAAA+TGG | 0.329939 | 8.3:+38545826 | MS.gene038604:CDS |
| GAAAGTTTCTTTGGATCTCT+TGG | 0.345987 | 8.3:+38546630 | MS.gene038604:CDS |
| ACAGAGGAAACCAAGCCATT+AGG | 0.349242 | 8.3:+38545952 | MS.gene038604:CDS |
| GCAGGAATTGCAATGCTTGT+TGG | 0.361301 | 8.3:+38546139 | MS.gene038604:intron |
| TCATTTCAGAACTTGTTTCT+GGG | 0.363224 | 8.3:+38543563 | MS.gene038604:intron |
| ATACTGCAAATATGGCAATT+AGG | 0.364589 | 8.3:+38545610 | MS.gene038604:CDS |
| GTCATCACACCTGTTGAATA+TGG | 0.365763 | 8.3:+38547158 | MS.gene038604:CDS |
| TCAGGGGTCACAACAATTGC+TGG | 0.373460 | 8.3:+38545816 | MS.gene038604:intron |
| ATTAGGAAAATTAGTGATTC+GGG | 0.377436 | 8.3:+38545627 | MS.gene038604:CDS |
| CTTAAAGCTACCACCAAAAC+TGG | 0.381528 | 8.3:+38543631 | MS.gene038604:CDS |
| GATGATTGTGCATATCGATA+TGG | 0.382744 | 8.3:+38545993 | MS.gene038604:CDS |
| AATTAGGAAAATTAGTGATT+CGG | 0.383780 | 8.3:+38545626 | MS.gene038604:CDS |
| GCTGATCCAGCCACCAGCTT+CGG | 0.391616 | 8.3:-38545486 | None:intergenic |
| TTCGTCAATGGTGGAGATAA+TGG | 0.398053 | 8.3:+38546674 | MS.gene038604:CDS |
| TCATCAACAGTTATCCCCTT+TGG | 0.399379 | 8.3:-38545564 | None:intergenic |
| GACATGTTGATGGGAGGCTC+AGG | 0.403629 | 8.3:+38545523 | MS.gene038604:CDS |
| TGGTTTCTTTGGTTATATGC+TGG | 0.403960 | 8.3:+38546165 | MS.gene038604:CDS |
| TGTGGTCTTCTTCTGAAAAC+AGG | 0.420773 | 8.3:-38546708 | None:intergenic |
| CTTGCAGGTGAAGTGGTTGA+TGG | 0.422939 | 8.3:-38543461 | None:intergenic |
| CTCAGAAGCAAGTGAATGAT+TGG | 0.423951 | 8.3:+38546772 | MS.gene038604:CDS |
| TGGAGGCCTTACAGATTTCA+AGG | 0.434455 | 8.3:-38546571 | None:intergenic |
| AATGTGGAAACTGTGTTTGA+TGG | 0.436794 | 8.3:+38543796 | MS.gene038604:CDS |
| GACTTTGATGTGGTTTATGT+TGG | 0.439630 | 8.3:+38545903 | MS.gene038604:CDS |
| GTTGGATCTCCCTAATGGCT+TGG | 0.442364 | 8.3:-38545962 | None:intergenic |
| GGTAAGCTTCTTGCGAATGC+TGG | 0.443223 | 8.3:+38546651 | MS.gene038604:CDS |
| TGCAGATAGCAGACCGAAGC+TGG | 0.445900 | 8.3:+38545473 | MS.gene038604:intron |
| GCATTGCTGCAGCGTAGGCT+CGG | 0.449626 | 8.3:+38546187 | MS.gene038604:CDS |
| TGCAAAACCTCAACAGCATA+AGG | 0.450890 | 8.3:-38543838 | None:intergenic |
| TATGGCAGTGATTTCCCTCT+TGG | 0.451443 | 8.3:+38546011 | MS.gene038604:CDS |
| ACAGAAGGCATTACTGTTAG+TGG | 0.454864 | 8.3:-38546525 | None:intergenic |
| CGGTACAATTGTAGAATCTC+AGG | 0.455028 | 8.3:+38546207 | MS.gene038604:CDS |
| CACAATCATCAAAGTGGAGT+TGG | 0.462222 | 8.3:-38545980 | None:intergenic |
| ATTGCAATGCTTGTTGGGGC+TGG | 0.462265 | 8.3:+38546145 | MS.gene038604:CDS |
| TGCGAATGCTGGTTCGTCAA+TGG | 0.462539 | 8.3:+38546662 | MS.gene038604:CDS |
| AGCAGACCGAAGCTGGTGGC+TGG | 0.465719 | 8.3:+38545480 | MS.gene038604:CDS |
| TCGTCAATGGTGGAGATAAT+GGG | 0.467902 | 8.3:+38546675 | MS.gene038604:CDS |
| TCATATTCTGATGGAATCAA+TGG | 0.473880 | 8.3:-38546591 | None:intergenic |
| ATCACGAAACTTTCCTGTGC+TGG | 0.477387 | 8.3:-38546795 | None:intergenic |
| GCAGGAACAGGAGGGGAAGA+AGG | 0.479757 | 8.3:+38547127 | MS.gene038604:CDS |
| GAAAATTTAGCTTCTTCACT+TGG | 0.479921 | 8.3:-38545876 | None:intergenic |
| AGGAAAATGGAGCCGTGGAG+GGG | 0.481087 | 8.3:+38545839 | MS.gene038604:CDS |
| GGAAAATGGAGCCGTGGAGG+GGG | 0.481323 | 8.3:+38545840 | MS.gene038604:CDS |
| TGTTGTTGTTGATGTGGTTG+TGG | 0.483300 | 8.3:-38546984 | None:intergenic |
| TGCTGCTGTTGTTGTTGATG+TGG | 0.490699 | 8.3:-38546990 | None:intergenic |
| GGATATTCTGGACATGTTGA+TGG | 0.492558 | 8.3:+38545513 | MS.gene038604:CDS |
| AATGAGCCTCCATATTCAAC+AGG | 0.498016 | 8.3:-38547167 | None:intergenic |
| GAGGAAAATGGAGCCGTGGA+GGG | 0.498407 | 8.3:+38545838 | MS.gene038604:CDS |
| GTGGAGTTGGATCTCCCTAA+TGG | 0.498446 | 8.3:-38545967 | None:intergenic |
| ATGGGAGGCTCAGGGAGGCT+AGG | 0.499515 | 8.3:+38545532 | MS.gene038604:CDS |
| GTGTTTGATGGAAGCAAGCT+TGG | 0.504687 | 8.3:+38543808 | MS.gene038604:CDS |
| AGAATATGAACCCGAAAAGC+AGG | 0.507195 | 8.3:+38546605 | MS.gene038604:CDS |
| TTCCTCTGTCTACAACAAGC+AGG | 0.507435 | 8.3:-38545938 | None:intergenic |
| AAAAGCCCTTGAAATCTGTA+AGG | 0.509266 | 8.3:+38546565 | MS.gene038604:CDS |
| GTGAGGAAGAGATTCTGTAA+AGG | 0.524636 | 8.3:-38543900 | None:intergenic |
| TGGGGCAGTGCAGGAACAGG+AGG | 0.528931 | 8.3:+38547118 | MS.gene038604:CDS |
| AGTGAATGATTGGCCAGCAC+AGG | 0.531678 | 8.3:+38546782 | MS.gene038604:CDS |
| GCATTCTACAGCGGGTGGGA+TGG | 0.534762 | 8.3:+38546930 | MS.gene038604:CDS |
| TCTGCATCTTTCGACATGAA+AGG | 0.538618 | 8.3:-38546879 | None:intergenic |
| CAACAGTTATCCCCTTTGGA+TGG | 0.541128 | 8.3:-38545560 | None:intergenic |
| ATCTTTCGACATGAAAGGAT+AGG | 0.541256 | 8.3:-38546874 | None:intergenic |
| GGAGGAAAATGGAGCCGTGG+AGG | 0.541631 | 8.3:+38545837 | MS.gene038604:CDS |
| AATTGAGCCTTATGCTGTTG+AGG | 0.544199 | 8.3:+38543831 | MS.gene038604:CDS |
| TCGGTCTCGAATGAGTTACA+TGG | 0.544992 | 8.3:+38547208 | MS.gene038604:CDS |
| GTGTTTGCCTTTGAAATTGG+TGG | 0.549431 | 8.3:-38546737 | None:intergenic |
| AAAGTAAAGCATTCTACAGC+GGG | 0.550622 | 8.3:+38546922 | MS.gene038604:CDS |
| CTGCAACATAAATATTTCCT+CGG | 0.552933 | 8.3:-38545587 | None:intergenic |
| GCTAGGATGAACCATCCAAA+GGG | 0.554047 | 8.3:+38545549 | MS.gene038604:CDS |
| GATATTCTGGACATGTTGAT+GGG | 0.558030 | 8.3:+38545514 | MS.gene038604:CDS |
| CGGTCTCGAATGAGTTACAT+GGG | 0.565662 | 8.3:+38547209 | MS.gene038604:CDS |
| ACATGTTGATGGGAGGCTCA+GGG | 0.573249 | 8.3:+38545524 | MS.gene038604:CDS |
| GGTGCCCTTGTGTCGATAGA+CGG | 0.575046 | 8.3:-38546837 | None:intergenic |
| AAGTGTGAGGGACCGACGAT+TGG | 0.581409 | 8.3:-38547055 | None:intergenic |
| GATATGCACAATCATCAAAG+TGG | 0.588148 | 8.3:-38545986 | None:intergenic |
| GGGGCAGTGCAGGAACAGGA+GGG | 0.589930 | 8.3:+38547119 | MS.gene038604:CDS |
| TGCTGGCATTGCTGCAGCGT+AGG | 0.592474 | 8.3:+38546182 | MS.gene038604:CDS |
| GGAGGCCTTACAGATTTCAA+GGG | 0.593740 | 8.3:-38546570 | None:intergenic |
| GGCTAGGATGAACCATCCAA+AGG | 0.596756 | 8.3:+38545548 | MS.gene038604:CDS |
| AGAGCTACCACCAATTTCAA+AGG | 0.597932 | 8.3:+38546730 | MS.gene038604:CDS |
| CTGGTGGCTGGATCAGCTGA+AGG | 0.598904 | 8.3:+38545492 | MS.gene038604:CDS |
| CTTTGCTCATAGAAAGTGTG+AGG | 0.599735 | 8.3:-38547068 | None:intergenic |
| AGACTTACACAAAGAGAGTG+AGG | 0.600106 | 8.3:-38543917 | None:intergenic |
| GGACCGACGATTGGTACTGA+TGG | 0.601463 | 8.3:-38547046 | None:intergenic |
| TATGTAGTTTGAGAAACAGA+AGG | 0.609655 | 8.3:-38546540 | None:intergenic |
| GTACTTACTTGCAGGTGAAG+TGG | 0.615067 | 8.3:-38543468 | None:intergenic |
| AGGAATTGCAATGCTTGTTG+GGG | 0.616374 | 8.3:+38546141 | MS.gene038604:intron |
| TCCCTGCTTGTTGTAGACAG+AGG | 0.617020 | 8.3:+38545936 | MS.gene038604:CDS |
| GGGCAGTGCAGGAACAGGAG+GGG | 0.624818 | 8.3:+38547120 | MS.gene038604:CDS |
| TCCTCTGTCTACAACAAGCA+GGG | 0.626459 | 8.3:-38545937 | None:intergenic |
| GTAAAGCATTCTACAGCGGG+TGG | 0.626899 | 8.3:+38546925 | MS.gene038604:CDS |
| TGAAATTGGTGGTAGCTCTG+TGG | 0.637791 | 8.3:-38546726 | None:intergenic |
| ATCACACCTGTTGAATATGG+AGG | 0.639031 | 8.3:+38547161 | MS.gene038604:CDS |
| AACCACCGTCTATCGACACA+AGG | 0.643306 | 8.3:+38546832 | MS.gene038604:CDS |
| TAAAGCATTCTACAGCGGGT+GGG | 0.645434 | 8.3:+38546926 | MS.gene038604:CDS |
| TATTCTGATGGAATCAATGG+AGG | 0.648038 | 8.3:-38546588 | None:intergenic |
| CTTCACTTGGTCCATCAACG+TGG | 0.652333 | 8.3:-38545863 | None:intergenic |
| TCAATGATGAAGTTTGAGAG+TGG | 0.653433 | 8.3:+38543769 | MS.gene038604:CDS |
| GGAGGGGAAGAAGGAATCTG+TGG | 0.656900 | 8.3:+38547136 | MS.gene038604:CDS |
| ATTCTGGACATGTTGATGGG+AGG | 0.671648 | 8.3:+38545517 | MS.gene038604:CDS |
| GTTTGAGAGTGGTTACAATG+TGG | 0.673385 | 8.3:+38543780 | MS.gene038604:CDS |
| AGATAGCAGACCGAAGCTGG+TGG | 0.673593 | 8.3:+38545476 | MS.gene038604:intron |
| GCTGGAGGAAAATGGAGCCG+TGG | 0.674332 | 8.3:+38545834 | MS.gene038604:CDS |
| TCGCCATCAGTACCAATCGT+CGG | 0.674819 | 8.3:+38547043 | MS.gene038604:CDS |
| GACGGTGGTTCGTCTTCACG+AGG | 0.675975 | 8.3:-38546819 | None:intergenic |
| GGGGTCACAACAATTGCTGG+AGG | 0.677079 | 8.3:+38545819 | MS.gene038604:intron |
| TTTGCTCATAGAAAGTGTGA+GGG | 0.679724 | 8.3:-38547067 | None:intergenic |
| CAAAGTAAAGCATTCTACAG+CGG | 0.680426 | 8.3:+38546921 | MS.gene038604:CDS |
| GGGATAACTGTTGATGACCG+AGG | 0.680794 | 8.3:+38545570 | MS.gene038604:CDS |
| GAATGCTGGTTCGTCAATGG+TGG | 0.699259 | 8.3:+38546665 | MS.gene038604:CDS |
| TCAATGGTGGAGATAATGGG+AGG | 0.703995 | 8.3:+38546678 | MS.gene038604:CDS |
| ACCACCGTCTATCGACACAA+GGG | 0.731163 | 8.3:+38546833 | MS.gene038604:CDS |
| GCCCTTGTGTCGATAGACGG+TGG | 0.732896 | 8.3:-38546834 | None:intergenic |
| TGTTGATGGGAGGCTCAGGG+AGG | 0.745216 | 8.3:+38545527 | MS.gene038604:CDS |
| CTAGGATGAACCATCCAAAG+GGG | 0.746879 | 8.3:+38545550 | MS.gene038604:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAGATATCTTTTTTTC+AGG | + | chr8.3:38545798-38545817 | MS.gene038604:intron | 15.0% |
| !!! | ATTAAGATATCTTTTTTTCA+GGG | + | chr8.3:38545799-38545818 | MS.gene038604:intron | 15.0% |
| !!! | TGTTTTTTAGATTCATAATT+TGG | + | chr8.3:38543982-38544001 | MS.gene038604:intron | 15.0% |
| !!! | TTGAATTTTTATAAGACAAT+TGG | + | chr8.3:38546274-38546293 | MS.gene038604:intron | 15.0% |
| !! | AATTAGGAAAATTAGTGATT+CGG | + | chr8.3:38545626-38545645 | MS.gene038604:CDS | 20.0% |
| !! | ACTAATGCTTATATAGAATT+TGG | + | chr8.3:38544190-38544209 | MS.gene038604:intron | 20.0% |
| !! | CTAATGCTTATATAGAATTT+GGG | + | chr8.3:38544191-38544210 | MS.gene038604:intron | 20.0% |
| !! | TACACAAAATTCAATCATTT+AGG | - | chr8.3:38545716-38545735 | None:intergenic | 20.0% |
| !! | TTCAATATAAATACATCAGA+AGG | - | chr8.3:38546259-38546278 | None:intergenic | 20.0% |
| !!! | ACTTTTATCATAAAGTTTAC+TGG | - | chr8.3:38545762-38545781 | None:intergenic | 20.0% |
| !!! | ATCAGTTTTGAATAGTTTAA+GGG | + | chr8.3:38544793-38544812 | MS.gene038604:intron | 20.0% |
| !!! | CTCCTTTTAAAAAAATGTAA+GGG | - | chr8.3:38544636-38544655 | None:intergenic | 20.0% |
| !!! | GTTTAAAATTAAGTTACTCA+AGG | - | chr8.3:38544479-38544498 | None:intergenic | 20.0% |
| !!! | TCCTTTTAAAAAAATGTAAG+GGG | - | chr8.3:38544635-38544654 | None:intergenic | 20.0% |
| !!! | TTAAGATATCTTTTTTTCAG+GGG | + | chr8.3:38545800-38545819 | MS.gene038604:intron | 20.0% |
| ! | AAAAACAATATATCACCAAG+AGG | - | chr8.3:38545672-38545691 | None:intergenic | 25.0% |
| ! | AAAACAATATATCACCAAGA+GGG | - | chr8.3:38545671-38545690 | None:intergenic | 25.0% |
| ! | AATCATTTAGGTATTAAGCA+TGG | - | chr8.3:38545704-38545723 | None:intergenic | 25.0% |
| ! | ATCTCTTCATTGTATCATAT+TGG | + | chr8.3:38544161-38544180 | MS.gene038604:intron | 25.0% |
| ! | ATTAAACAGGAGAAAAATGA+CGG | - | chr8.3:38544834-38544853 | None:intergenic | 25.0% |
| ! | ATTAAATTAGTGAGACTGTT+TGG | + | chr8.3:38544252-38544271 | MS.gene038604:intron | 25.0% |
| ! | ATTAGGAAAATTAGTGATTC+GGG | + | chr8.3:38545627-38545646 | MS.gene038604:CDS | 25.0% |
| ! | TTAAATTAGTGAGACTGTTT+GGG | + | chr8.3:38544253-38544272 | MS.gene038604:intron | 25.0% |
| ! | TTCATTCTTCATATTCTCTT+TGG | + | chr8.3:38543410-38543429 | MS.gene038604:CDS | 25.0% |
| !! | AGATGATAACTTTGAAGAAA+TGG | - | chr8.3:38543523-38543542 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTAACCAAAC+AGG | - | chr8.3:38545021-38545040 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTAACCAAACA+GGG | - | chr8.3:38545020-38545039 | None:intergenic | 25.0% |
| !!! | AAGATTTTAGTTTTACCAAG+AGG | - | chr8.3:38546029-38546048 | None:intergenic | 25.0% |
| !!! | AGATTTTAGTTTTACCAAGA+GGG | - | chr8.3:38546028-38546047 | None:intergenic | 25.0% |
| !!! | CATCAGTTTTGAATAGTTTA+AGG | + | chr8.3:38544792-38544811 | MS.gene038604:intron | 25.0% |
| !!! | GCTCCTTTTAAAAAAATGTA+AGG | - | chr8.3:38544637-38544656 | None:intergenic | 25.0% |
| !!! | TCAGTTTTGAATAGTTTAAG+GGG | + | chr8.3:38544794-38544813 | MS.gene038604:intron | 25.0% |
| !!! | TCCCCTTACATTTTTTTAAA+AGG | + | chr8.3:38544631-38544650 | MS.gene038604:intron | 25.0% |
| !!! | TTGTTGATTTATGTGTGTTT+TGG | + | chr8.3:38543726-38543745 | MS.gene038604:intron | 25.0% |
| AATCGACTACAACTTATATG+TGG | + | chr8.3:38544851-38544870 | MS.gene038604:intron | 30.0% | |
| AATGGAAGCAAAAGAAGAAA+TGG | - | chr8.3:38543505-38543524 | None:intergenic | 30.0% | |
| ATACTGCAAATATGGCAATT+AGG | + | chr8.3:38545610-38545629 | MS.gene038604:CDS | 30.0% | |
| ATGGAAGCAAAAGAAGAAAT+GGG | - | chr8.3:38543504-38543523 | None:intergenic | 30.0% | |
| ATTATGTTGTGGATAATTGG+TGG | + | chr8.3:38544061-38544080 | MS.gene038604:intron | 30.0% | |
| CAAAAACAGAAATGATCACA+AGG | - | chr8.3:38543964-38543983 | None:intergenic | 30.0% | |
| CTGCAACATAAATATTTCCT+CGG | - | chr8.3:38545590-38545609 | None:intergenic | 30.0% | |
| CTTATTTCCAAAAACTCTCT+AGG | - | chr8.3:38545162-38545181 | None:intergenic | 30.0% | |
| GATTATGTCACATGATTTCA+TGG | + | chr8.3:38544973-38544992 | MS.gene038604:intron | 30.0% | |
| GTGACATAATCTTCGATATT+TGG | - | chr8.3:38544964-38544983 | None:intergenic | 30.0% | |
| TAAGTTGTAGTCGATTAAAC+AGG | - | chr8.3:38544847-38544866 | None:intergenic | 30.0% | |
| TATGTAGTTTGAGAAACAGA+AGG | - | chr8.3:38546543-38546562 | None:intergenic | 30.0% | |
| TCATATTCTGATGGAATCAA+TGG | - | chr8.3:38546594-38546613 | None:intergenic | 30.0% | |
| TGCTTAACATTGTTCTTTCA+CGG | + | chr8.3:38544507-38544526 | MS.gene038604:intron | 30.0% | |
| TGGATTATGTTGTGGATAAT+TGG | + | chr8.3:38544058-38544077 | MS.gene038604:intron | 30.0% | |
| TTTGGAGATTAGATACTTGA+TGG | + | chr8.3:38544038-38544057 | MS.gene038604:intron | 30.0% | |
| ! | AACCAATGAAGTAGTTTTTG+GGG | + | chr8.3:38547100-38547119 | MS.gene038604:CDS | 30.0% |
| ! | ACAACCAATGAAGTAGTTTT+TGG | + | chr8.3:38547098-38547117 | MS.gene038604:CDS | 30.0% |
| ! | ATTTTCTGATGACTTTGATG+TGG | + | chr8.3:38545893-38545912 | MS.gene038604:CDS | 30.0% |
| ! | CAACCAATGAAGTAGTTTTT+GGG | + | chr8.3:38547099-38547118 | MS.gene038604:CDS | 30.0% |
| ! | GAAAATTTAGCTTCTTCACT+TGG | - | chr8.3:38545879-38545898 | None:intergenic | 30.0% |
| ! | TATAGAATTTGGGACATGTT+TGG | + | chr8.3:38544201-38544220 | MS.gene038604:intron | 30.0% |
| ! | TCATTTCAGAACTTGTTTCT+GGG | + | chr8.3:38543563-38543582 | MS.gene038604:intron | 30.0% |
| ! | TCTATCATGTTTTCAGCTTA+AGG | - | chr8.3:38544333-38544352 | None:intergenic | 30.0% |
| ! | TTCATTTCAGAACTTGTTTC+TGG | + | chr8.3:38543562-38543581 | MS.gene038604:intron | 30.0% |
| !! | AAACATCTTATGCTTTTTGC+AGG | + | chr8.3:38546494-38546513 | MS.gene038604:intron | 30.0% |
| !! | ATACTTGATGGATTATGTTG+TGG | + | chr8.3:38544050-38544069 | MS.gene038604:intron | 30.0% |
| !! | TCTATTTTCTCAAGTATTGC+TGG | + | chr8.3:38546416-38546435 | MS.gene038604:intron | 30.0% |
| !! | TGCATTTTGATATATGTCAG+CGG | + | chr8.3:38545357-38545376 | MS.gene038604:intron | 30.0% |
| !!! | CAATGTTTTTAGACGATTCA+TGG | + | chr8.3:38544664-38544683 | MS.gene038604:intron | 30.0% |
| !!! | TGTTCCTGCTTTTTCTAAAT+GGG | + | chr8.3:38543600-38543619 | MS.gene038604:CDS | 30.0% |
| !!! | TTATGTGTGTTTTGGTTGAA+GGG | + | chr8.3:38543734-38543753 | MS.gene038604:intron | 30.0% |
| !!! | TTTATGTGTGTTTTGGTTGA+AGG | + | chr8.3:38543733-38543752 | MS.gene038604:intron | 30.0% |
| AAAAGCCCTTGAAATCTGTA+AGG | + | chr8.3:38546565-38546584 | MS.gene038604:CDS | 35.0% | |
| AAGCAAAAGAAGAAATGGGT+TGG | - | chr8.3:38543500-38543519 | None:intergenic | 35.0% | |
| AAGCAGGAAGAAAGTTTCTT+TGG | + | chr8.3:38546621-38546640 | MS.gene038604:CDS | 35.0% | |
| AAGTTCATTACTGTCTGAGA+TGG | + | chr8.3:38544717-38544736 | MS.gene038604:intron | 35.0% | |
| AATATATCACCAAGAGGGAA+AGG | - | chr8.3:38545666-38545685 | None:intergenic | 35.0% | |
| AATGTGGAAACTGTGTTTGA+TGG | + | chr8.3:38543796-38543815 | MS.gene038604:CDS | 35.0% | |
| ACCAAAACTGGTATGGAATA+TGG | + | chr8.3:38543643-38543662 | MS.gene038604:intron | 35.0% | |
| ATCTTTCGACATGAAAGGAT+AGG | - | chr8.3:38546877-38546896 | None:intergenic | 35.0% | |
| CAAACCCATTTAGAAAAAGC+AGG | - | chr8.3:38543607-38543626 | None:intergenic | 35.0% | |
| CAGAAAAAATTCAACAGCTG+CGG | + | chr8.3:38546898-38546917 | MS.gene038604:CDS | 35.0% | |
| GAAAGTTTCTTTGGATCTCT+TGG | + | chr8.3:38546630-38546649 | MS.gene038604:CDS | 35.0% | |
| GAATGAAGTATACACATGCA+AGG | - | chr8.3:38545423-38545442 | None:intergenic | 35.0% | |
| GACTTTGATGTGGTTTATGT+TGG | + | chr8.3:38545903-38545922 | MS.gene038604:CDS | 35.0% | |
| GATATGCACAATCATCAAAG+TGG | - | chr8.3:38545989-38546008 | None:intergenic | 35.0% | |
| GATATTCTGGACATGTTGAT+GGG | + | chr8.3:38545514-38545533 | MS.gene038604:CDS | 35.0% | |
| GATGATTGTGCATATCGATA+TGG | + | chr8.3:38545993-38546012 | MS.gene038604:CDS | 35.0% | |
| GATGTGATACGTCTTCATTA+AGG | - | chr8.3:38545330-38545349 | None:intergenic | 35.0% | |
| GCATTTCTTATCATGCAACT+TGG | + | chr8.3:38544576-38544595 | MS.gene038604:intron | 35.0% | |
| GTCATAGGATCTGTTAGAAT+TGG | - | chr8.3:38545308-38545327 | None:intergenic | 35.0% | |
| TACGTCTTCATTAAGGTCAT+AGG | - | chr8.3:38545323-38545342 | None:intergenic | 35.0% | |
| TATTCTGATGGAATCAATGG+AGG | - | chr8.3:38546591-38546610 | None:intergenic | 35.0% | |
| TCAATGATGAAGTTTGAGAG+TGG | + | chr8.3:38543769-38543788 | MS.gene038604:CDS | 35.0% | |
| TGGTTTCTTTGGTTATATGC+TGG | + | chr8.3:38546165-38546184 | MS.gene038604:CDS | 35.0% | |
| TGTTGCAGATACTGCAAATA+TGG | + | chr8.3:38545602-38545621 | MS.gene038604:CDS | 35.0% | |
| TTCATGATTATGACCCTGTT+TGG | + | chr8.3:38545004-38545023 | MS.gene038604:intron | 35.0% | |
| TTCTTATCATGCAACTTGGA+TGG | + | chr8.3:38544580-38544599 | MS.gene038604:intron | 35.0% | |
| ! | AAAGTAAAGCATTCTACAGC+GGG | + | chr8.3:38546922-38546941 | MS.gene038604:CDS | 35.0% |
| ! | AATTTGGGACATGTTTGGAT+TGG | + | chr8.3:38544206-38544225 | MS.gene038604:intron | 35.0% |
| ! | ATGAAAGGATAGGTTTTTCG+AGG | - | chr8.3:38546867-38546886 | None:intergenic | 35.0% |
| ! | CAAAGTAAAGCATTCTACAG+CGG | + | chr8.3:38546921-38546940 | MS.gene038604:CDS | 35.0% |
| ! | CTGTTGAGGTTTTGCATAAT+GGG | + | chr8.3:38543845-38543864 | MS.gene038604:CDS | 35.0% |
| ! | TCCATATTCCATACCAGTTT+TGG | - | chr8.3:38543647-38543666 | None:intergenic | 35.0% |
| ! | TGTTGAGGTTTTGCATAATG+GGG | + | chr8.3:38543846-38543865 | MS.gene038604:CDS | 35.0% |
| ! | TTTGCTCATAGAAAGTGTGA+GGG | - | chr8.3:38547070-38547089 | None:intergenic | 35.0% |
| !! | AAACTTTCTTCCTGCTTTTC+GGG | - | chr8.3:38546618-38546637 | None:intergenic | 35.0% |
| !! | ATATTCCATACCAGTTTTGG+TGG | - | chr8.3:38543644-38543663 | None:intergenic | 35.0% |
| !! | CATTTTGATATATGTCAGCG+GGG | + | chr8.3:38545359-38545378 | MS.gene038604:intron | 35.0% |
| !! | GAAACTTTCTTCCTGCTTTT+CGG | - | chr8.3:38546619-38546638 | None:intergenic | 35.0% |
| !! | GCATTTTGATATATGTCAGC+GGG | + | chr8.3:38545358-38545377 | MS.gene038604:intron | 35.0% |
| !! | TCAGTGTTTGCCTTTGAAAT+TGG | - | chr8.3:38546743-38546762 | None:intergenic | 35.0% |
| !! | TGAAAGGATAGGTTTTTCGA+GGG | - | chr8.3:38546866-38546885 | None:intergenic | 35.0% |
| !! | TTCCAAAAACTCTCTAGGAT+AGG | - | chr8.3:38545157-38545176 | None:intergenic | 35.0% |
| !!! | AGTTTTGGTGGTAGCTTTAA+GGG | - | chr8.3:38543632-38543651 | None:intergenic | 35.0% |
| !!! | CTGCTTTTTCTAAATGGGTT+TGG | + | chr8.3:38543605-38543624 | MS.gene038604:CDS | 35.0% |
| !!! | CTGTTCCTGCTTTTTCTAAA+TGG | + | chr8.3:38543599-38543618 | MS.gene038604:CDS | 35.0% |
| !!! | GGAATGCTTTTTTCCGAATT+CGG | + | chr8.3:38544086-38544105 | MS.gene038604:intron | 35.0% |
| !!! | TATGTGTGTTTTGGTTGAAG+GGG | + | chr8.3:38543735-38543754 | MS.gene038604:intron | 35.0% |
| !!! | TTTTCGGGTTCATATTCTGA+TGG | - | chr8.3:38546603-38546622 | None:intergenic | 35.0% |
| AAAATGTAAGGGGAATGCCA+CGG | - | chr8.3:38544625-38544644 | None:intergenic | 40.0% | |
| AAGTTACTCAAGGCTCTGTT+TGG | - | chr8.3:38544469-38544488 | None:intergenic | 40.0% | |
| AATGAGCCTCCATATTCAAC+AGG | - | chr8.3:38547170-38547189 | None:intergenic | 40.0% | |
| ACATCAGAAGGAAGAAGACA+AGG | - | chr8.3:38546247-38546266 | None:intergenic | 40.0% | |
| AGAAAAAGCAGGAACAGCAT+TGG | - | chr8.3:38543596-38543615 | None:intergenic | 40.0% | |
| AGAATATGAACCCGAAAAGC+AGG | + | chr8.3:38546605-38546624 | MS.gene038604:CDS | 40.0% | |
| AGACTTACACAAAGAGAGTG+AGG | - | chr8.3:38543920-38543939 | None:intergenic | 40.0% | |
| AGAGCTACCACCAATTTCAA+AGG | + | chr8.3:38546730-38546749 | MS.gene038604:CDS | 40.0% | |
| ATCACACCTGTTGAATATGG+AGG | + | chr8.3:38547161-38547180 | MS.gene038604:CDS | 40.0% | |
| CAACAATTGCTGGAGGAAAA+TGG | + | chr8.3:38545826-38545845 | MS.gene038604:CDS | 40.0% | |
| CACAATCATCAAAGTGGAGT+TGG | - | chr8.3:38545983-38546002 | None:intergenic | 40.0% | |
| CAGGAATTGCAATGCTTGTT+GGG | + | chr8.3:38546140-38546159 | MS.gene038604:intron | 40.0% | |
| CGGTACAATTGTAGAATCTC+AGG | + | chr8.3:38546207-38546226 | MS.gene038604:CDS | 40.0% | |
| CTCAGAAGCAAGTGAATGAT+TGG | + | chr8.3:38546772-38546791 | MS.gene038604:CDS | 40.0% | |
| CTTAAAGCTACCACCAAAAC+TGG | + | chr8.3:38543631-38543650 | MS.gene038604:CDS | 40.0% | |
| GATTTATTTCCTTCGTTCGC+AGG | + | chr8.3:38546121-38546140 | MS.gene038604:intron | 40.0% | |
| GGATATTCTGGACATGTTGA+TGG | + | chr8.3:38545513-38545532 | MS.gene038604:CDS | 40.0% | |
| GTCATCACACCTGTTGAATA+TGG | + | chr8.3:38547158-38547177 | MS.gene038604:CDS | 40.0% | |
| GTGAGGAAGAGATTCTGTAA+AGG | - | chr8.3:38543903-38543922 | None:intergenic | 40.0% | |
| GTTTGAGAGTGGTTACAATG+TGG | + | chr8.3:38543780-38543799 | MS.gene038604:CDS | 40.0% | |
| TCATCAACAGTTATCCCCTT+TGG | - | chr8.3:38545567-38545586 | None:intergenic | 40.0% | |
| TCCAAATCTTTGACGCAAAG+AGG | - | chr8.3:38544917-38544936 | None:intergenic | 40.0% | |
| TCCTCTTTGCGTCAAAGATT+TGG | + | chr8.3:38544913-38544932 | MS.gene038604:intron | 40.0% | |
| TCTGCATCTTTCGACATGAA+AGG | - | chr8.3:38546882-38546901 | None:intergenic | 40.0% | |
| TGCAAAACCTCAACAGCATA+AGG | - | chr8.3:38543841-38543860 | None:intergenic | 40.0% | |
| TGCAAGGACATAAACTGTCA+CGG | - | chr8.3:38545407-38545426 | None:intergenic | 40.0% | |
| TGCCCCAAAAACTACTTCAT+TGG | - | chr8.3:38547105-38547124 | None:intergenic | 40.0% | |
| TGTCAAACACCGATAGATGT+CGG | - | chr8.3:38546371-38546390 | None:intergenic | 40.0% | |
| TTTCTTCATCCTTTCCCTCT+TGG | + | chr8.3:38545654-38545673 | MS.gene038604:intron | 40.0% | |
| ! | AATTGAGCCTTATGCTGTTG+AGG | + | chr8.3:38543831-38543850 | MS.gene038604:CDS | 40.0% |
| ! | AGGAATTGCAATGCTTGTTG+GGG | + | chr8.3:38546141-38546160 | MS.gene038604:intron | 40.0% |
| ! | CTTTGCTCATAGAAAGTGTG+AGG | - | chr8.3:38547071-38547090 | None:intergenic | 40.0% |
| ! | GACCTATCCTAGAGAGTTTT+TGG | + | chr8.3:38545152-38545171 | MS.gene038604:intron | 40.0% |
| ! | GCTGTTGAGGTTTTGCATAA+TGG | + | chr8.3:38543844-38543863 | MS.gene038604:CDS | 40.0% |
| ! | TCGTCAATGGTGGAGATAAT+GGG | + | chr8.3:38546675-38546694 | MS.gene038604:CDS | 40.0% |
| ! | TGGATGGTTTTCTTTGCCTT+GGG | + | chr8.3:38544596-38544615 | MS.gene038604:intron | 40.0% |
| ! | TGTACGAACATCGCGATTTT+CGG | + | chr8.3:38547189-38547208 | MS.gene038604:CDS | 40.0% |
| ! | TGTGGTCTTCTTCTGAAAAC+AGG | - | chr8.3:38546711-38546730 | None:intergenic | 40.0% |
| ! | TGTTGTGGATAATTGGTGGT+TGG | + | chr8.3:38544065-38544084 | MS.gene038604:intron | 40.0% |
| ! | TGTTGTTGTTGATGTGGTTG+TGG | - | chr8.3:38546987-38547006 | None:intergenic | 40.0% |
| ! | TTCGTCAATGGTGGAGATAA+TGG | + | chr8.3:38546674-38546693 | MS.gene038604:CDS | 40.0% |
| ! | TTCTCAAGTATTGCTGGTGT+TGG | + | chr8.3:38546422-38546441 | MS.gene038604:intron | 40.0% |
| ! | TTGGATGGTTTTCTTTGCCT+TGG | + | chr8.3:38544595-38544614 | MS.gene038604:intron | 40.0% |
| !! | ACAGAAGGCATTACTGTTAG+TGG | - | chr8.3:38546528-38546547 | None:intergenic | 40.0% |
| !! | ACTTTGATAAGCACTGACAC+AGG | - | chr8.3:38546470-38546489 | None:intergenic | 40.0% |
| !! | CAAAAGAAGAAATGGGTTGG+TGG | - | chr8.3:38543497-38543516 | None:intergenic | 40.0% |
| !! | CAGTTTTGGTGGTAGCTTTA+AGG | - | chr8.3:38543633-38543652 | None:intergenic | 40.0% |
| !! | GTGTTTGCCTTTGAAATTGG+TGG | - | chr8.3:38546740-38546759 | None:intergenic | 40.0% |
| !! | GTTTTTAGACGATTCATGGC+AGG | + | chr8.3:38544668-38544687 | MS.gene038604:intron | 40.0% |
| !! | TCACTTGCTTCTGAGATTGT+TGG | - | chr8.3:38546767-38546786 | None:intergenic | 40.0% |
| !!! | AATGCCGATGAGCTAGTTTT+GGG | + | chr8.3:38544109-38544128 | MS.gene038604:intron | 40.0% |
| !!! | GAAAGGATAGGTTTTTCGAG+GGG | - | chr8.3:38546865-38546884 | None:intergenic | 40.0% |
| ACAGAGGAAACCAAGCCATT+AGG | + | chr8.3:38545952-38545971 | MS.gene038604:CDS | 45.0% | |
| ACGCAAAGAGGAGTTGAACT+GGG | - | chr8.3:38544905-38544924 | None:intergenic | 45.0% | |
| AGCTACCACCAAAACTGGTA+TGG | + | chr8.3:38543636-38543655 | MS.gene038604:intron | 45.0% | |
| ATCACGAAACTTTCCTGTGC+TGG | - | chr8.3:38546798-38546817 | None:intergenic | 45.0% | |
| ATTGCAATTCCTGCGAACGA+AGG | - | chr8.3:38546133-38546152 | None:intergenic | 45.0% | |
| CAACAGTTATCCCCTTTGGA+TGG | - | chr8.3:38545563-38545582 | None:intergenic | 45.0% | |
| CACACCCAAAACTAGCTCAT+CGG | - | chr8.3:38544116-38544135 | None:intergenic | 45.0% | |
| CAGAGGAAACCAAGCCATTA+GGG | + | chr8.3:38545953-38545972 | MS.gene038604:CDS | 45.0% | |
| CGGTCTCGAATGAGTTACAT+GGG | + | chr8.3:38547209-38547228 | MS.gene038604:CDS | 45.0% | |
| CTAGGATGAACCATCCAAAG+GGG | + | chr8.3:38545550-38545569 | MS.gene038604:CDS | 45.0% | |
| CTTCAAATTGAAGACGTGCC+CGG | + | chr8.3:38546342-38546361 | MS.gene038604:intron | 45.0% | |
| GCAGGAATTGCAATGCTTGT+TGG | + | chr8.3:38546139-38546158 | MS.gene038604:intron | 45.0% | |
| GCTAGGATGAACCATCCAAA+GGG | + | chr8.3:38545549-38545568 | MS.gene038604:CDS | 45.0% | |
| GGAGGCCTTACAGATTTCAA+GGG | - | chr8.3:38546573-38546592 | None:intergenic | 45.0% | |
| GGAGTTGAACTGGGAAAAAG+TGG | - | chr8.3:38544896-38544915 | None:intergenic | 45.0% | |
| GGATCAGCTGAAGGATATTC+TGG | + | chr8.3:38545501-38545520 | MS.gene038604:CDS | 45.0% | |
| GTACTTACTTGCAGGTGAAG+TGG | - | chr8.3:38543471-38543490 | None:intergenic | 45.0% | |
| GTGTTTGATGGAAGCAAGCT+TGG | + | chr8.3:38543808-38543827 | MS.gene038604:CDS | 45.0% | |
| TATGGCAGTGATTTCCCTCT+TGG | + | chr8.3:38546011-38546030 | MS.gene038604:CDS | 45.0% | |
| TCCTCTGTCTACAACAAGCA+GGG | - | chr8.3:38545940-38545959 | None:intergenic | 45.0% | |
| TCGGTCTCGAATGAGTTACA+TGG | + | chr8.3:38547208-38547227 | MS.gene038604:CDS | 45.0% | |
| TGGAGGCCTTACAGATTTCA+AGG | - | chr8.3:38546574-38546593 | None:intergenic | 45.0% | |
| TTCCTCTGTCTACAACAAGC+AGG | - | chr8.3:38545941-38545960 | None:intergenic | 45.0% | |
| ! | ATTCTGGACATGTTGATGGG+AGG | + | chr8.3:38545517-38545536 | MS.gene038604:CDS | 45.0% |
| ! | TAAAGCATTCTACAGCGGGT+GGG | + | chr8.3:38546926-38546945 | MS.gene038604:CDS | 45.0% |
| ! | TGAAATTGGTGGTAGCTCTG+TGG | - | chr8.3:38546729-38546748 | None:intergenic | 45.0% |
| ! | TGCTGCTGTTGTTGTTGATG+TGG | - | chr8.3:38546993-38547012 | None:intergenic | 45.0% |
| !! | CTTATGCTTTTTGCAGGCTC+AGG | + | chr8.3:38546500-38546519 | MS.gene038604:intron | 45.0% |
| !! | GAATGCCGATGAGCTAGTTT+TGG | + | chr8.3:38544108-38544127 | MS.gene038604:intron | 45.0% |
| !! | TCAATGGTGGAGATAATGGG+AGG | + | chr8.3:38546678-38546697 | MS.gene038604:CDS | 45.0% |
| !! | AAAATTAAAAAAACAAAAAA+TGG | - | chr8.3:38543693-38543712 | None:intergenic | 5.0% |
| !!! | AATTAATTATTATTACTTTT+TGG | + | chr8.3:38544020-38544039 | MS.gene038604:intron | 5.0% |
| AACCACCGTCTATCGACACA+AGG | + | chr8.3:38546832-38546851 | MS.gene038604:CDS | 50.0% | |
| ACCACCGTCTATCGACACAA+GGG | + | chr8.3:38546833-38546852 | MS.gene038604:CDS | 50.0% | |
| AGACGATTCATGGCAGGTCA+GGG | + | chr8.3:38544674-38544693 | MS.gene038604:intron | 50.0% | |
| CTGTGGCTGTGTAACTCTCA+TGG | + | chr8.3:38544747-38544766 | MS.gene038604:intron | 50.0% | |
| CTTCACTTGGTCCATCAACG+TGG | - | chr8.3:38545866-38545885 | None:intergenic | 50.0% | |
| CTTGCAGGTGAAGTGGTTGA+TGG | - | chr8.3:38543464-38543483 | None:intergenic | 50.0% | |
| GACGCAAAGAGGAGTTGAAC+TGG | - | chr8.3:38544906-38544925 | None:intergenic | 50.0% | |
| GCTCATCGGCATTCCGAATT+CGG | - | chr8.3:38544102-38544121 | None:intergenic | 50.0% | |
| GGCTAGGATGAACCATCCAA+AGG | + | chr8.3:38545548-38545567 | MS.gene038604:CDS | 50.0% | |
| GGTAAGCTTCTTGCGAATGC+TGG | + | chr8.3:38546651-38546670 | MS.gene038604:CDS | 50.0% | |
| GGTGGTGAGTACTTACTTGC+AGG | - | chr8.3:38543479-38543498 | None:intergenic | 50.0% | |
| GTGGAGTTGGATCTCCCTAA+TGG | - | chr8.3:38545970-38545989 | None:intergenic | 50.0% | |
| GTTGGATCTCCCTAATGGCT+TGG | - | chr8.3:38545965-38545984 | None:intergenic | 50.0% | |
| TAGACGATTCATGGCAGGTC+AGG | + | chr8.3:38544673-38544692 | MS.gene038604:intron | 50.0% | |
| TCAGGGGTCACAACAATTGC+TGG | + | chr8.3:38545816-38545835 | MS.gene038604:intron | 50.0% | |
| TCGCCATCAGTACCAATCGT+CGG | + | chr8.3:38547043-38547062 | MS.gene038604:CDS | 50.0% | |
| ! | ACATGTTGATGGGAGGCTCA+GGG | + | chr8.3:38545524-38545543 | MS.gene038604:CDS | 50.0% |
| ! | AGTGAATGATTGGCCAGCAC+AGG | + | chr8.3:38546782-38546801 | MS.gene038604:CDS | 50.0% |
| ! | ATTGCAATGCTTGTTGGGGC+TGG | + | chr8.3:38546145-38546164 | MS.gene038604:CDS | 50.0% |
| ! | GTAAAGCATTCTACAGCGGG+TGG | + | chr8.3:38546925-38546944 | MS.gene038604:CDS | 50.0% |
| !! | ATAAGCACTGACACAGGCAC+CGG | - | chr8.3:38546464-38546483 | None:intergenic | 50.0% |
| !! | CTTGTTGGGGCTGGTTTCTT+TGG | + | chr8.3:38546154-38546173 | MS.gene038604:CDS | 50.0% |
| !! | GAATGCTGGTTCGTCAATGG+TGG | + | chr8.3:38546665-38546684 | MS.gene038604:CDS | 50.0% |
| !! | GGGATAACTGTTGATGACCG+AGG | + | chr8.3:38545570-38545589 | MS.gene038604:CDS | 50.0% |
| !! | TCCCTGCTTGTTGTAGACAG+AGG | + | chr8.3:38545936-38545955 | MS.gene038604:CDS | 50.0% |
| !! | TGCGAATGCTGGTTCGTCAA+TGG | + | chr8.3:38546662-38546681 | MS.gene038604:CDS | 50.0% |
| !!! | AGCTAGTTTTGGGTGTGGTG+TGG | + | chr8.3:38544119-38544138 | MS.gene038604:intron | 50.0% |
| !!! | AGTAGTTTTTGGGGCAGTGC+AGG | + | chr8.3:38547109-38547128 | MS.gene038604:CDS | 50.0% |
| !!! | CGATGAGCTAGTTTTGGGTG+TGG | + | chr8.3:38544114-38544133 | MS.gene038604:intron | 50.0% |
| !!! | GGATAGGTTTTTCGAGGGGT+TGG | - | chr8.3:38546861-38546880 | None:intergenic | 50.0% |
| AAGTGTGAGGGACCGACGAT+TGG | - | chr8.3:38547058-38547077 | None:intergenic | 55.0% | |
| ACCGATAGATGTCGGACACC+GGG | - | chr8.3:38546363-38546382 | None:intergenic | 55.0% | |
| AGATAGCAGACCGAAGCTGG+TGG | + | chr8.3:38545476-38545495 | MS.gene038604:intron | 55.0% | |
| AGGAAAATGGAGCCGTGGAG+GGG | + | chr8.3:38545839-38545858 | MS.gene038604:CDS | 55.0% | |
| CACCGATAGATGTCGGACAC+CGG | - | chr8.3:38546364-38546383 | None:intergenic | 55.0% | |
| GAGAGTTACACAGCCACAGC+AGG | - | chr8.3:38544746-38544765 | None:intergenic | 55.0% | |
| GAGGAAAATGGAGCCGTGGA+GGG | + | chr8.3:38545838-38545857 | MS.gene038604:CDS | 55.0% | |
| GGAGGGGAAGAAGGAATCTG+TGG | + | chr8.3:38547136-38547155 | MS.gene038604:CDS | 55.0% | |
| GGGGTCACAACAATTGCTGG+AGG | + | chr8.3:38545819-38545838 | MS.gene038604:intron | 55.0% | |
| TGCAGATAGCAGACCGAAGC+TGG | + | chr8.3:38545473-38545492 | MS.gene038604:intron | 55.0% | |
| ! | GACATGTTGATGGGAGGCTC+AGG | + | chr8.3:38545523-38545542 | MS.gene038604:CDS | 55.0% |
| ! | GGACCGACGATTGGTACTGA+TGG | - | chr8.3:38547049-38547068 | None:intergenic | 55.0% |
| ! | GGTGCCCTTGTGTCGATAGA+CGG | - | chr8.3:38546840-38546859 | None:intergenic | 55.0% |
| ! | TTCTTTGCCTTGGGTTGCCG+TGG | + | chr8.3:38544605-38544624 | MS.gene038604:intron | 55.0% |
| !! | TAAGCACTGACACAGGCACC+GGG | - | chr8.3:38546463-38546482 | None:intergenic | 55.0% |
| !!! | TTTTGGGGCAGTGCAGGAAC+AGG | + | chr8.3:38547115-38547134 | MS.gene038604:CDS | 55.0% |
| CTGGTGGCTGGATCAGCTGA+AGG | + | chr8.3:38545492-38545511 | MS.gene038604:CDS | 60.0% | |
| GACGGTGGTTCGTCTTCACG+AGG | - | chr8.3:38546822-38546841 | None:intergenic | 60.0% | |
| GCAGGAACAGGAGGGGAAGA+AGG | + | chr8.3:38547127-38547146 | MS.gene038604:CDS | 60.0% | |
| GCATTCTACAGCGGGTGGGA+TGG | + | chr8.3:38546930-38546949 | MS.gene038604:CDS | 60.0% | |
| GCATTGCTGCAGCGTAGGCT+CGG | + | chr8.3:38546187-38546206 | MS.gene038604:CDS | 60.0% | |
| GCCCGGTGTCCGACATCTAT+CGG | + | chr8.3:38546359-38546378 | MS.gene038604:intron | 60.0% | |
| GCTGATCCAGCCACCAGCTT+CGG | - | chr8.3:38545489-38545508 | None:intergenic | 60.0% | |
| GCTGGAGGAAAATGGAGCCG+TGG | + | chr8.3:38545834-38545853 | MS.gene038604:CDS | 60.0% | |
| GGAAAATGGAGCCGTGGAGG+GGG | + | chr8.3:38545840-38545859 | MS.gene038604:CDS | 60.0% | |
| GGAGGAAAATGGAGCCGTGG+AGG | + | chr8.3:38545837-38545856 | MS.gene038604:CDS | 60.0% | |
| TGCTGGCATTGCTGCAGCGT+AGG | + | chr8.3:38546182-38546201 | MS.gene038604:CDS | 60.0% | |
| TGGCGTGTCAGTGTCATGCC+CGG | + | chr8.3:38546442-38546461 | MS.gene038604:intron | 60.0% | |
| ! | GCCCTTGTGTCGATAGACGG+TGG | - | chr8.3:38546837-38546856 | None:intergenic | 60.0% |
| ! | TCTGAGATGGCAGCCTGCTG+TGG | + | chr8.3:38544730-38544749 | MS.gene038604:intron | 60.0% |
| ! | TGTTGATGGGAGGCTCAGGG+AGG | + | chr8.3:38545527-38545546 | MS.gene038604:CDS | 60.0% |
| AGCAGACCGAAGCTGGTGGC+TGG | + | chr8.3:38545480-38545499 | MS.gene038604:CDS | 65.0% | |
| ATGGGAGGCTCAGGGAGGCT+AGG | + | chr8.3:38545532-38545551 | MS.gene038604:CDS | 65.0% | |
| CATCAACGTGGCCCCCTCCA+CGG | - | chr8.3:38545854-38545873 | None:intergenic | 65.0% | |
| GGGAATGCCACGGCAACCCA+AGG | - | chr8.3:38544615-38544634 | None:intergenic | 65.0% | |
| GGGCAGTGCAGGAACAGGAG+GGG | + | chr8.3:38547120-38547139 | MS.gene038604:CDS | 65.0% | |
| GGGGCAGTGCAGGAACAGGA+GGG | + | chr8.3:38547119-38547138 | MS.gene038604:CDS | 65.0% | |
| TGGGGCAGTGCAGGAACAGG+AGG | + | chr8.3:38547118-38547137 | MS.gene038604:CDS | 65.0% | |
| CGTGGAGGGGGCCACGTTGA+TGG | + | chr8.3:38545852-38545871 | MS.gene038604:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 38543383 | 38547244 | 38543383 | ID=MS.gene038604 |
| chr8.3 | mRNA | 38543383 | 38547244 | 38543383 | ID=MS.gene038604.t1;Parent=MS.gene038604 |
| chr8.3 | exon | 38543383 | 38543482 | 38543383 | ID=MS.gene038604.t1.exon1;Parent=MS.gene038604.t1 |
| chr8.3 | CDS | 38543383 | 38543482 | 38543383 | ID=cds.MS.gene038604.t1;Parent=MS.gene038604.t1 |
| chr8.3 | exon | 38543572 | 38543652 | 38543572 | ID=MS.gene038604.t1.exon2;Parent=MS.gene038604.t1 |
| chr8.3 | CDS | 38543572 | 38543652 | 38543572 | ID=cds.MS.gene038604.t1;Parent=MS.gene038604.t1 |
| chr8.3 | exon | 38543755 | 38543931 | 38543755 | ID=MS.gene038604.t1.exon3;Parent=MS.gene038604.t1 |
| chr8.3 | CDS | 38543755 | 38543931 | 38543755 | ID=cds.MS.gene038604.t1;Parent=MS.gene038604.t1 |
| chr8.3 | exon | 38545478 | 38545648 | 38545478 | ID=MS.gene038604.t1.exon4;Parent=MS.gene038604.t1 |
| chr8.3 | CDS | 38545478 | 38545648 | 38545478 | ID=cds.MS.gene038604.t1;Parent=MS.gene038604.t1 |
| chr8.3 | exon | 38545820 | 38546032 | 38545820 | ID=MS.gene038604.t1.exon5;Parent=MS.gene038604.t1 |
| chr8.3 | CDS | 38545820 | 38546032 | 38545820 | ID=cds.MS.gene038604.t1;Parent=MS.gene038604.t1 |
| chr8.3 | exon | 38546143 | 38546231 | 38546143 | ID=MS.gene038604.t1.exon6;Parent=MS.gene038604.t1 |
| chr8.3 | CDS | 38546143 | 38546231 | 38546143 | ID=cds.MS.gene038604.t1;Parent=MS.gene038604.t1 |
| chr8.3 | exon | 38546516 | 38547244 | 38546516 | ID=MS.gene038604.t1.exon7;Parent=MS.gene038604.t1 |
| chr8.3 | CDS | 38546516 | 38547244 | 38546516 | ID=cds.MS.gene038604.t1;Parent=MS.gene038604.t1 |
| Gene Sequence |
| Protein sequence |
