Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070347.t1 | XP_003613269.2 | 96.8 | 560 | 15 | 1 | 1 | 557 | 1 | 560 | 1.60E-253 | 885.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070347.t1 | G7K1H4 | 96.8 | 560 | 15 | 1 | 1 | 557 | 1 | 560 | 1.2e-253 | 885.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009144 | MS.gene070347 | PPI |
| MS.gene070347 | MS.gene027598 | PPI |
| MS.gene070347 | MS.gene45070 | PPI |
| MS.gene027590 | MS.gene070347 | PPI |
| MS.gene027598 | MS.gene070347 | PPI |
| MS.gene070347 | MS.gene038604 | PPI |
| MS.gene43884 | MS.gene070347 | PPI |
| MS.gene71002 | MS.gene070347 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070347.t1 | MTR_5g034750 | 96.607 | 560 | 16 | 1 | 1 | 557 | 1 | 560 | 0.0 | 1116 |
| MS.gene070347.t1 | MTR_8g063760 | 66.182 | 550 | 130 | 10 | 15 | 557 | 21 | 521 | 0.0 | 660 |
| MS.gene070347.t1 | MTR_6g007720 | 48.635 | 586 | 238 | 15 | 4 | 557 | 8 | 562 | 1.03e-162 | 475 |
| MS.gene070347.t1 | MTR_2g075860 | 39.552 | 402 | 207 | 11 | 7 | 405 | 9 | 377 | 8.63e-76 | 248 |
| MS.gene070347.t1 | MTR_5g034550 | 66.875 | 160 | 28 | 3 | 118 | 263 | 1 | 149 | 4.18e-62 | 201 |
| MS.gene070347.t1 | MTR_8g058630 | 61.151 | 139 | 53 | 1 | 120 | 258 | 13 | 150 | 3.01e-49 | 167 |
| MS.gene070347.t1 | MTR_8g063700 | 38.308 | 201 | 117 | 4 | 70 | 266 | 31 | 228 | 1.42e-34 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070347.t1 | AT1G70280 | 58.238 | 522 | 145 | 10 | 20 | 534 | 20 | 475 | 0.0 | 529 |
| MS.gene070347.t1 | AT1G23880 | 61.827 | 427 | 138 | 8 | 5 | 419 | 64 | 477 | 1.07e-173 | 502 |
| MS.gene070347.t1 | AT1G70280 | 58.613 | 476 | 127 | 9 | 66 | 534 | 1 | 413 | 3.74e-172 | 495 |
| MS.gene070347.t1 | AT1G23880 | 64.820 | 361 | 112 | 6 | 66 | 419 | 1 | 353 | 6.32e-157 | 455 |
| MS.gene070347.t1 | AT5G14890 | 52.792 | 394 | 149 | 12 | 16 | 392 | 21 | 394 | 1.45e-121 | 367 |
| MS.gene070347.t1 | AT3G14860 | 40.674 | 386 | 197 | 10 | 6 | 388 | 18 | 374 | 2.82e-79 | 258 |
| MS.gene070347.t1 | AT3G14860 | 40.674 | 386 | 196 | 10 | 6 | 388 | 18 | 373 | 1.10e-78 | 256 |
| MS.gene070347.t1 | AT1G23890 | 46.465 | 198 | 92 | 6 | 41 | 236 | 6 | 191 | 1.50e-43 | 156 |
| MS.gene070347.t1 | AT1G23890 | 46.465 | 198 | 92 | 6 | 41 | 236 | 6 | 191 | 1.72e-42 | 157 |
Find 119 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTAGGGGTTGGAGTTCT+TGG | 0.127961 | 5.4:-24814694 | None:intergenic |
| CAAGCATTTATCTGCCTTTC+AGG | 0.128350 | 5.4:-24814616 | None:intergenic |
| CTTCTCGGTGCTGGCTTCTT+TGG | 0.219575 | 5.4:+24813785 | MS.gene070347:CDS |
| TAATGGAAATAATGGGTTTC+AGG | 0.238542 | 5.4:+24814545 | MS.gene070347:CDS |
| ATTAGGAAAATTAGCGATTC+AGG | 0.250879 | 5.4:+24812907 | MS.gene070347:CDS |
| CAATGGGGAACTTCTGATTC+TGG | 0.274823 | 5.4:+24811997 | MS.gene070347:CDS |
| TTATCTGCCTTTCAGGTTGA+TGG | 0.275148 | 5.4:-24814609 | None:intergenic |
| GCAGATCCTGCCACAAGTTT+TGG | 0.290153 | 5.4:-24812766 | None:intergenic |
| TGACAGACTTCAACGGCTTT+TGG | 0.297538 | 5.4:-24814426 | None:intergenic |
| TGTTGCAGATATTATGAATA+TGG | 0.304153 | 5.4:+24812882 | MS.gene070347:CDS |
| GAAACCAATGAGATAGTATT+TGG | 0.308736 | 5.4:+24815081 | MS.gene070347:CDS |
| GGATCTGCTGAAGGATATTC+TGG | 0.315805 | 5.4:+24812781 | MS.gene070347:CDS |
| GGCCTCAGTAATGGAAATAA+TGG | 0.317699 | 5.4:+24814537 | MS.gene070347:CDS |
| CTTTCAGGTTGATGGAATAA+AGG | 0.331937 | 5.4:-24814601 | None:intergenic |
| GTCTGTAGTTATCAAGCCTT+TGG | 0.338039 | 5.4:+24815131 | MS.gene070347:CDS |
| GAAGGAGGCTCGTCTTCATT+TGG | 0.360866 | 5.4:-24814664 | None:intergenic |
| GTTCCCTTCTTGTCATTGAC+AGG | 0.369268 | 5.4:+24813586 | MS.gene070347:CDS |
| TCTTAGGGGTTGGAGTTCTT+GGG | 0.370584 | 5.4:-24814693 | None:intergenic |
| TCAGGGGTTACAACAATTGC+TGG | 0.374378 | 5.4:+24813468 | MS.gene070347:intron |
| GGGAAGCTTCTTACCAATGC+TGG | 0.376253 | 5.4:+24814514 | MS.gene070347:CDS |
| CAAGGTCGAGCGCTCTATAA+TGG | 0.384552 | 5.4:+24814766 | MS.gene070347:CDS |
| AAGTACAATTGTTGCATCTC+AGG | 0.391018 | 5.4:+24813838 | MS.gene070347:CDS |
| ATATTATGAATATGGCAATT+AGG | 0.393436 | 5.4:+24812890 | MS.gene070347:CDS |
| GGAGTTCTTGGGTCAATAGA+AGG | 0.407998 | 5.4:-24814682 | None:intergenic |
| GAAGGTCTCTTTGCATCCAT+TGG | 0.415306 | 5.4:+24814493 | MS.gene070347:CDS |
| CTGTACCTGCTTTCACCAAA+TGG | 0.422982 | 5.4:+24811412 | MS.gene070347:CDS |
| ATTGCAATGCTTCTCGGTGC+TGG | 0.424767 | 5.4:+24813776 | MS.gene070347:CDS |
| GCAGGAATTGCAATGCTTCT+CGG | 0.424774 | 5.4:+24813770 | MS.gene070347:intron |
| TGCACCAAATACTATCTCAT+TGG | 0.430196 | 5.4:-24815085 | None:intergenic |
| GACTTTGATGTGGTTTATGT+TGG | 0.436835 | 5.4:+24813555 | MS.gene070347:CDS |
| TGGCTTCTTTGGTTATATGC+TGG | 0.442934 | 5.4:+24813796 | MS.gene070347:CDS |
| TGTTGAATGACAGCGATTGC+TGG | 0.443118 | 5.4:+24811878 | MS.gene070347:intron |
| ATTTGGTGCAGTGCAGGAAC+AGG | 0.458482 | 5.4:+24815098 | MS.gene070347:CDS |
| TCATCAACAGTAATCCCCTT+TGG | 0.462701 | 5.4:-24812844 | None:intergenic |
| TTTAAGTGAGAACACCCATT+TGG | 0.465712 | 5.4:-24811427 | None:intergenic |
| GGAAGCTTCTTACCAATGCT+GGG | 0.467300 | 5.4:+24814515 | MS.gene070347:CDS |
| GACAACACCTCAACTGCATA+AGG | 0.469296 | 5.4:-24811974 | None:intergenic |
| GGATATTCTGGACATGTTGA+TGG | 0.471604 | 5.4:+24812793 | MS.gene070347:CDS |
| ATCTGTATAACGGATGGGAC+GGG | 0.471877 | 5.4:+24814905 | MS.gene070347:CDS |
| CAATGCTGGGGCCTCAGTAA+TGG | 0.474328 | 5.4:+24814528 | MS.gene070347:CDS |
| ATTGCAAATGTGCAGATAGC+AGG | 0.474396 | 5.4:+24812743 | MS.gene070347:intron |
| GCCTCAGTAATGGAAATAAT+GGG | 0.479278 | 5.4:+24814538 | MS.gene070347:CDS |
| GGTGAAATAGATGAGGATAA+TGG | 0.481601 | 5.4:-24811272 | None:intergenic |
| CAGGTTGATGGAATAAAGGT+TGG | 0.481740 | 5.4:-24814597 | None:intergenic |
| AATGTGGAAACTGTGTTTGA+TGG | 0.487534 | 5.4:+24811932 | MS.gene070347:CDS |
| CATTACTGAGGCCCCAGCAT+TGG | 0.498957 | 5.4:-24814527 | None:intergenic |
| TTCCCTTCTTGTCATTGACA+GGG | 0.499403 | 5.4:+24813587 | MS.gene070347:CDS |
| GATAGTATTTGGTGCAGTGC+AGG | 0.501838 | 5.4:+24815092 | MS.gene070347:CDS |
| AAGGTCTCTTTGCATCCATT+GGG | 0.503206 | 5.4:+24814494 | MS.gene070347:CDS |
| GTGTTTGATGGAAGCAAGCT+TGG | 0.504687 | 5.4:+24811944 | MS.gene070347:CDS |
| CCCTTCTTGTCATTGACAGG+GGG | 0.505062 | 5.4:+24813589 | MS.gene070347:CDS |
| ATTACAAAACTTTCTTGCAC+AGG | 0.511415 | 5.4:-24814640 | None:intergenic |
| AGGAAAATTAAGCCGTGGAG+GGG | 0.513958 | 5.4:+24813491 | MS.gene070347:CDS |
| GAAAATTTAGCCTCTTCACT+TGG | 0.515319 | 5.4:-24813528 | None:intergenic |
| CAGTTGAGGTGTTGTCCAAT+GGG | 0.518028 | 5.4:+24811981 | MS.gene070347:CDS |
| GTCGAGCGCTCTATAATGGA+TGG | 0.520041 | 5.4:+24814770 | MS.gene070347:CDS |
| TTATAAGATTCGTCTTCTGA+TGG | 0.521940 | 5.4:-24814463 | None:intergenic |
| GGAAAATTAAGCCGTGGAGG+GGG | 0.524556 | 5.4:+24813492 | MS.gene070347:CDS |
| TCGGTGTCTTTAATCATGAA+AGG | 0.531257 | 5.4:-24814724 | None:intergenic |
| TGTACCTGCTTTCACCAAAT+GGG | 0.534825 | 5.4:+24811413 | MS.gene070347:CDS |
| CATCTGTATAACGGATGGGA+CGG | 0.535895 | 5.4:+24814904 | MS.gene070347:CDS |
| GCAGTTGAGGTGTTGTCCAA+TGG | 0.538251 | 5.4:+24811980 | MS.gene070347:CDS |
| AGCAGGCCAAAACTTGTGGC+AGG | 0.539310 | 5.4:+24812760 | MS.gene070347:CDS |
| GCTAGGATGAACCATCCAAA+GGG | 0.540888 | 5.4:+24812829 | MS.gene070347:CDS |
| CACATGTACAATGGATGGGA+AGG | 0.543065 | 5.4:+24814832 | MS.gene070347:CDS |
| CTGAAAGGCAGATAAATGCT+TGG | 0.545419 | 5.4:+24814617 | MS.gene070347:CDS |
| TTGTATATACTCAGTACTTG+TGG | 0.545744 | 5.4:-24815209 | None:intergenic |
| GAATCTTATAAGCAAGAAGA+AGG | 0.549566 | 5.4:+24814475 | MS.gene070347:CDS |
| CTTCACTTGGTCCATCGACA+TGG | 0.549805 | 5.4:-24813515 | None:intergenic |
| TGTGCTTATCAATACGAAAG+TGG | 0.552302 | 5.4:+24813651 | MS.gene070347:CDS |
| AACACCCATTTGGTGAAAGC+AGG | 0.559076 | 5.4:-24811417 | None:intergenic |
| GAGGAAAATTAAGCCGTGGA+GGG | 0.560020 | 5.4:+24813490 | MS.gene070347:CDS |
| TCGTCTTCTGATGGAATCAA+AGG | 0.565286 | 5.4:-24814454 | None:intergenic |
| CAACAGTAATCCCCTTTGGA+TGG | 0.565390 | 5.4:-24812840 | None:intergenic |
| CTTTATTCCATCAACCTGAA+AGG | 0.572841 | 5.4:+24814602 | MS.gene070347:CDS |
| TCGTAATCAGTATCATTCAT+CGG | 0.576911 | 5.4:+24815026 | MS.gene070347:CDS |
| TCCCTTCTTGTCATTGACAG+GGG | 0.577472 | 5.4:+24813588 | MS.gene070347:CDS |
| CAGAATCAGAAGTTCCCCAT+TGG | 0.578098 | 5.4:-24811996 | None:intergenic |
| GTTGAATGACAGCGATTGCT+GGG | 0.579249 | 5.4:+24811879 | MS.gene070347:intron |
| TGTGGTTGCTGTTGTTGTTG+CGG | 0.581099 | 5.4:-24814943 | None:intergenic |
| ATGGAAAATTAAGAGAGGCT+AGG | 0.581572 | 5.4:+24812812 | MS.gene070347:CDS |
| AGAGAATCATTGTAATCCAA+AGG | 0.587333 | 5.4:-24815147 | None:intergenic |
| GCGCTCTATAATGGATGGGA+AGG | 0.591158 | 5.4:+24814775 | MS.gene070347:CDS |
| AATTGAGCCTTATGCAGTTG+AGG | 0.593409 | 5.4:+24811967 | MS.gene070347:CDS |
| ACCCATTATTTCCATTACTG+AGG | 0.593842 | 5.4:-24814539 | None:intergenic |
| TCAATGATGAAGTTTGAGAG+TGG | 0.594836 | 5.4:+24811905 | MS.gene070347:CDS |
| AAAACATCTGTATAACGGAT+GGG | 0.597862 | 5.4:+24814969 | MS.gene070347:CDS |
| AAAACACATGTACAATGGAT+GGG | 0.602015 | 5.4:+24814828 | MS.gene070347:CDS |
| CTGCAACATAGATATTTCCT+CGG | 0.604716 | 5.4:-24812867 | None:intergenic |
| TCGCAGCTGAATCTCCCTGA+TGG | 0.605029 | 5.4:-24813619 | None:intergenic |
| AGTGCAGGAACAGGACATGA+AGG | 0.606038 | 5.4:+24815107 | MS.gene070347:CDS |
| GAAGCTTCTTACCAATGCTG+GGG | 0.609183 | 5.4:+24814516 | MS.gene070347:CDS |
| CATCTGTATAACGGATGGGA+CGG | 0.609816 | 5.4:+24814973 | MS.gene070347:CDS |
| TCTGTATAACGGATGGGACG+GGG | 0.611830 | 5.4:+24814906 | MS.gene070347:CDS |
| GGCTAGGATGAACCATCCAA+AGG | 0.617213 | 5.4:+24812828 | MS.gene070347:CDS |
| CTTGTGGCAGGATCTGCTGA+AGG | 0.620300 | 5.4:+24812772 | MS.gene070347:CDS |
| AGATAGCAGGCCAAAACTTG+TGG | 0.620856 | 5.4:+24812756 | MS.gene070347:intron |
| TCGAGCGCTCTATAATGGAT+GGG | 0.623889 | 5.4:+24814771 | MS.gene070347:CDS |
| TGTCGATGGACCAAGTGAAG+AGG | 0.634224 | 5.4:+24813518 | MS.gene070347:CDS |
| AAAACATCTGTATAACGGAT+GGG | 0.636760 | 5.4:+24814900 | MS.gene070347:CDS |
| GAAATAGATGAGGATAATGG+TGG | 0.640252 | 5.4:-24811269 | None:intergenic |
| TACGAAAGTGGATTTCCACT+CGG | 0.643863 | 5.4:+24813663 | MS.gene070347:CDS |
| AAAATGCAACAATTGTGGCA+AGG | 0.645223 | 5.4:+24814748 | MS.gene070347:CDS |
| GGGGTTACAACAATTGCTGG+AGG | 0.651254 | 5.4:+24813471 | MS.gene070347:intron |
| GGAGGAAAATTAAGCCGTGG+AGG | 0.659080 | 5.4:+24813489 | MS.gene070347:CDS |
| ACTTGCAGGTGAAATAGATG+AGG | 0.661290 | 5.4:-24811279 | None:intergenic |
| ATTGGTAAGAAGCTTCCCAA+TGG | 0.665400 | 5.4:-24814509 | None:intergenic |
| TCTTCTGATGGAATCAAAGG+CGG | 0.665746 | 5.4:-24814451 | None:intergenic |
| GGCGGTCTGACAGACTTCAA+CGG | 0.670229 | 5.4:-24814433 | None:intergenic |
| GGTTGCTGTTGTTGTTGCTG+CGG | 0.673295 | 5.4:-24814871 | None:intergenic |
| TCTATGATCATCATAATATG+CGG | 0.675458 | 5.4:+24815169 | MS.gene070347:CDS |
| TGTTGATGGAAAATTAAGAG+AGG | 0.676240 | 5.4:+24812807 | MS.gene070347:CDS |
| TTACTATGAGCAAAGTCGTG+AGG | 0.679818 | 5.4:+24815059 | MS.gene070347:CDS |
| GTTCTTGGGTCAATAGAAGG+AGG | 0.680904 | 5.4:-24814679 | None:intergenic |
| GGGATTACTGTTGATGACCG+AGG | 0.687615 | 5.4:+24812850 | MS.gene070347:CDS |
| GTTTGAGAGTGGATACAATG+TGG | 0.694884 | 5.4:+24811916 | MS.gene070347:CDS |
| GCTGGAGGAAAATTAAGCCG+TGG | 0.705826 | 5.4:+24813486 | MS.gene070347:CDS |
| CTAGGATGAACCATCCAAAG+GGG | 0.746879 | 5.4:+24812830 | MS.gene070347:CDS |
| AGTTGAGGTGTTGTCCAATG+GGG | 0.770067 | 5.4:+24811982 | MS.gene070347:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTTGATAAATGAAAAAT+TGG | - | chr5.4:24811328-24811347 | None:intergenic | 15.0% |
| !! | AGTTAATAATATTTCAAATC+AGG | - | chr5.4:24812250-24812269 | None:intergenic | 15.0% |
| !! | AGTTTGATAAATGAAAAATT+GGG | - | chr5.4:24811327-24811346 | None:intergenic | 15.0% |
| !! | TAGAATAGTCATAAAAAAAT+CGG | + | chr5.4:24814074-24814093 | MS.gene070347:intron | 15.0% |
| !! | TATTAAAACTATATTGTATC+TGG | - | chr5.4:24811601-24811620 | None:intergenic | 15.0% |
| !!! | AATTGTTGTTATTATGAAAT+CGG | + | chr5.4:24812142-24812161 | MS.gene070347:intron | 15.0% |
| !!! | ATAGTTTTAATATAAAGTGT+TGG | + | chr5.4:24811609-24811628 | MS.gene070347:intron | 15.0% |
| !!! | CTATTATTTTTGTTTTGTTT+TGG | + | chr5.4:24811836-24811855 | MS.gene070347:intron | 15.0% |
| !! | ATATTATGAATATGGCAATT+AGG | + | chr5.4:24812890-24812909 | MS.gene070347:CDS | 20.0% |
| !! | ATCCAAAAACAAAATATGAT+TGG | + | chr5.4:24814111-24814130 | MS.gene070347:intron | 20.0% |
| !! | GTTATACTTAGATTAATCTT+TGG | + | chr5.4:24812940-24812959 | MS.gene070347:intron | 20.0% |
| !!! | TACCAATCATATTTTGTTTT+TGG | - | chr5.4:24814116-24814135 | None:intergenic | 20.0% |
| !!! | TTTTTTCAGAGATTGTTAAT+GGG | + | chr5.4:24811376-24811395 | MS.gene070347:intron | 20.0% |
| ! | ATGAAATCGGAATAATCTTT+CGG | + | chr5.4:24812155-24812174 | MS.gene070347:intron | 25.0% |
| ! | CAACAAAAACATCTGTATAA+CGG | + | chr5.4:24814964-24814983 | MS.gene070347:CDS | 25.0% |
| ! | GTTCATTTGTGTGTATATAT+AGG | + | chr5.4:24812989-24813008 | MS.gene070347:intron | 25.0% |
| ! | TCTATGATCATCATAATATG+CGG | + | chr5.4:24815169-24815188 | MS.gene070347:CDS | 25.0% |
| ! | TGTTGCAGATATTATGAATA+TGG | + | chr5.4:24812882-24812901 | MS.gene070347:CDS | 25.0% |
| !! | AATTAAGATGTCTGTTTTCA+GGG | + | chr5.4:24813451-24813470 | MS.gene070347:intron | 25.0% |
| !! | ATGAAAGGATATGTTTTCTT+AGG | - | chr5.4:24814712-24814731 | None:intergenic | 25.0% |
| !! | ATTTTCTAATGACTTTGATG+TGG | + | chr5.4:24813545-24813564 | MS.gene070347:CDS | 25.0% |
| !! | CAACTATTATACATCTTTTG+TGG | + | chr5.4:24812387-24812406 | MS.gene070347:intron | 25.0% |
| !! | GATATCTGTTTTCTCTTTTA+TGG | + | chr5.4:24813422-24813441 | MS.gene070347:intron | 25.0% |
| !! | TGAAAGGATATGTTTTCTTA+GGG | - | chr5.4:24814711-24814730 | None:intergenic | 25.0% |
| !! | TGTTTTCTCTTTTATGGAAA+AGG | + | chr5.4:24813428-24813447 | MS.gene070347:intron | 25.0% |
| !!! | AATGTATAGTTAGAAGTATC+TGG | + | chr5.4:24811552-24811571 | MS.gene070347:intron | 25.0% |
| !!! | AGATAGATCTATACCTTTTT+TGG | - | chr5.4:24811460-24811479 | None:intergenic | 25.0% |
| !!! | CTTTTTTCAGAGATTGTTAA+TGG | + | chr5.4:24811375-24811394 | MS.gene070347:intron | 25.0% |
| !!! | GATTTATTTTATTTACCGAG+TGG | - | chr5.4:24813681-24813700 | None:intergenic | 25.0% |
| !!! | TTATACAGATGTTTTTGTTG+TGG | - | chr5.4:24814964-24814983 | None:intergenic | 25.0% |
| !!! | TTTTGAAATTCATAGCTTTG+TGG | - | chr5.4:24814577-24814596 | None:intergenic | 25.0% |
| AAAAAAATCGGATAGACAGT+TGG | + | chr5.4:24814086-24814105 | MS.gene070347:intron | 30.0% | |
| AAAAACACATGTACAATGGA+TGG | + | chr5.4:24814827-24814846 | MS.gene070347:CDS | 30.0% | |
| AAAACACATGTACAATGGAT+GGG | + | chr5.4:24814828-24814847 | MS.gene070347:CDS | 30.0% | |
| AAGCATTTGTAAGATGGTTT+GGG | + | chr5.4:24813147-24813166 | MS.gene070347:intron | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | - | chr5.4:24813194-24813213 | None:intergenic | 30.0% | |
| ACTTTATGCTACACAATGAA+TGG | - | chr5.4:24812292-24812311 | None:intergenic | 30.0% | |
| AGAGAATCATTGTAATCCAA+AGG | - | chr5.4:24815150-24815169 | None:intergenic | 30.0% | |
| ATAAGCTGAAAACAGCTTAT+GGG | - | chr5.4:24813193-24813212 | None:intergenic | 30.0% | |
| ATTACAAAACTTTCTTGCAC+AGG | - | chr5.4:24814643-24814662 | None:intergenic | 30.0% | |
| ATTAGGAAAATTAGCGATTC+AGG | + | chr5.4:24812907-24812926 | MS.gene070347:CDS | 30.0% | |
| ATTTCAAATCAGGTCAAAAG+AGG | - | chr5.4:24812240-24812259 | None:intergenic | 30.0% | |
| CAAACCCTTGAATATAAGTT+TGG | - | chr5.4:24813088-24813107 | None:intergenic | 30.0% | |
| CAACAAAAACACATGTACAA+TGG | + | chr5.4:24814823-24814842 | MS.gene070347:CDS | 30.0% | |
| CAATATGACATCAAAGAGTT+TGG | + | chr5.4:24812515-24812534 | MS.gene070347:intron | 30.0% | |
| CAGCAAAAACATCTGTATAA+CGG | + | chr5.4:24814895-24814914 | MS.gene070347:CDS | 30.0% | |
| CATAAAGTAATGTGTGGAAA+TGG | + | chr5.4:24812304-24812323 | MS.gene070347:intron | 30.0% | |
| GAAACCAATGAGATAGTATT+TGG | + | chr5.4:24815081-24815100 | MS.gene070347:CDS | 30.0% | |
| GAATCTTATAAGCAAGAAGA+AGG | + | chr5.4:24814475-24814494 | MS.gene070347:CDS | 30.0% | |
| TAAGCATTTGTAAGATGGTT+TGG | + | chr5.4:24813146-24813165 | MS.gene070347:intron | 30.0% | |
| TAGGCCAAACTTATATTCAA+GGG | + | chr5.4:24813081-24813100 | MS.gene070347:intron | 30.0% | |
| TCCAGATTTCTTGAGAAAAA+AGG | + | chr5.4:24814166-24814185 | MS.gene070347:intron | 30.0% | |
| TCGTAATCAGTATCATTCAT+CGG | + | chr5.4:24815026-24815045 | MS.gene070347:CDS | 30.0% | |
| TCTTTCGGTGATTATAAGTT+TGG | + | chr5.4:24812170-24812189 | MS.gene070347:intron | 30.0% | |
| TGACATAAGCATTTGTAAGA+TGG | + | chr5.4:24813141-24813160 | MS.gene070347:intron | 30.0% | |
| TTACTTCTTACTTCTCATTG+TGG | + | chr5.4:24814193-24814212 | MS.gene070347:intron | 30.0% | |
| TTAGGCCAAACTTATATTCA+AGG | + | chr5.4:24813080-24813099 | MS.gene070347:intron | 30.0% | |
| TTATAAGATTCGTCTTCTGA+TGG | - | chr5.4:24814466-24814485 | None:intergenic | 30.0% | |
| TTCTGATTCTACAATCCAAA+GGG | - | chr5.4:24812481-24812500 | None:intergenic | 30.0% | |
| TTGAATGTAACCAAATGTGT+CGG | - | chr5.4:24813979-24813998 | None:intergenic | 30.0% | |
| TTTCTGATTCTACAATCCAA+AGG | - | chr5.4:24812482-24812501 | None:intergenic | 30.0% | |
| ! | AAAAACATCTGTATAACGGA+TGG | + | chr5.4:24814899-24814918 | MS.gene070347:CDS | 30.0% |
| ! | AACTGTCTTGTTGAAATTCA+AGG | + | chr5.4:24813030-24813049 | MS.gene070347:intron | 30.0% |
| ! | AATTCATCTCATGCTTTTGT+AGG | + | chr5.4:24814363-24814382 | MS.gene070347:intron | 30.0% |
| ! | ATTAAGATGTCTGTTTTCAG+GGG | + | chr5.4:24813452-24813471 | MS.gene070347:intron | 30.0% |
| ! | CTTATATTCAAGGGTTTGTT+TGG | + | chr5.4:24813090-24813109 | MS.gene070347:intron | 30.0% |
| ! | GAAAGGATATGTTTTCTTAG+GGG | - | chr5.4:24814710-24814729 | None:intergenic | 30.0% |
| ! | GAATTAAGATGTCTGTTTTC+AGG | + | chr5.4:24813450-24813469 | MS.gene070347:intron | 30.0% |
| ! | TGTTGATGGAAAATTAAGAG+AGG | + | chr5.4:24812807-24812826 | MS.gene070347:CDS | 30.0% |
| !! | AAAACATCTGTATAACGGAT+GGG | + | chr5.4:24814900-24814919 | MS.gene070347:CDS | 30.0% |
| !! | AATCCTGTAAATGTTGCTTT+AGG | + | chr5.4:24813062-24813081 | MS.gene070347:intron | 30.0% |
| !! | TAATGGAAATAATGGGTTTC+AGG | + | chr5.4:24814545-24814564 | MS.gene070347:CDS | 30.0% |
| !! | TTATACAGATGTTTTTGCTG+TGG | - | chr5.4:24814895-24814914 | None:intergenic | 30.0% |
| !!! | CCACAATTGTTGCATTTTTT+CGG | - | chr5.4:24814746-24814765 | None:intergenic | 30.0% |
| !!! | TAGATCTATACCTTTTTTGG+TGG | - | chr5.4:24811457-24811476 | None:intergenic | 30.0% |
| !!! | TCCTTTTTTCTCAAGAAATC+TGG | - | chr5.4:24814170-24814189 | None:intergenic | 30.0% |
| AAAATGCAACAATTGTGGCA+AGG | + | chr5.4:24814748-24814767 | MS.gene070347:CDS | 35.0% | |
| AAGTACAATTGTTGCATCTC+AGG | + | chr5.4:24813838-24813857 | MS.gene070347:CDS | 35.0% | |
| AAGTTATCCTGGAAAGCTTA+TGG | - | chr5.4:24813218-24813237 | None:intergenic | 35.0% | |
| AATGTGGAAACTGTGTTTGA+TGG | + | chr5.4:24811932-24811951 | MS.gene070347:CDS | 35.0% | |
| ACAAGAAACCATGAATGACA+AGG | + | chr5.4:24812432-24812451 | MS.gene070347:intron | 35.0% | |
| ACCCATTATTTCCATTACTG+AGG | - | chr5.4:24814542-24814561 | None:intergenic | 35.0% | |
| ATAAGGTGAAGTTACCACAT+TGG | - | chr5.4:24812080-24812099 | None:intergenic | 35.0% | |
| ATGAACAAAAACGTCTCTAG+AGG | - | chr5.4:24812975-24812994 | None:intergenic | 35.0% | |
| ATGGAAAATTAAGAGAGGCT+AGG | + | chr5.4:24812812-24812831 | MS.gene070347:CDS | 35.0% | |
| ATTAAGATGCCATAGATGCA+AGG | - | chr5.4:24812654-24812673 | None:intergenic | 35.0% | |
| CAAGAAACCATGAATGACAA+GGG | + | chr5.4:24812433-24812452 | MS.gene070347:intron | 35.0% | |
| CCGAAAAAATGCAACAATTG+TGG | + | chr5.4:24814743-24814762 | MS.gene070347:CDS | 35.0% | |
| CTGAAAAAAATGTCGCTAGT+AGG | - | chr5.4:24812115-24812134 | None:intergenic | 35.0% | |
| CTGCAACATAGATATTTCCT+CGG | - | chr5.4:24812870-24812889 | None:intergenic | 35.0% | |
| CTTAAACCAACCACCAAAAA+AGG | + | chr5.4:24811444-24811463 | MS.gene070347:CDS | 35.0% | |
| CTTATTTCCATAAGCTTTCC+AGG | + | chr5.4:24813208-24813227 | MS.gene070347:intron | 35.0% | |
| CTTTATTCCATCAACCTGAA+AGG | + | chr5.4:24814602-24814621 | MS.gene070347:CDS | 35.0% | |
| GAAAATTTAGCCTCTTCACT+TGG | - | chr5.4:24813531-24813550 | None:intergenic | 35.0% | |
| GACTTTGATGTGGTTTATGT+TGG | + | chr5.4:24813555-24813574 | MS.gene070347:CDS | 35.0% | |
| GGTGAAATAGATGAGGATAA+TGG | - | chr5.4:24811275-24811294 | None:intergenic | 35.0% | |
| GTGTAGCATAAAGTAATGTG+TGG | + | chr5.4:24812298-24812317 | MS.gene070347:intron | 35.0% | |
| TCAATGATGAAGTTTGAGAG+TGG | + | chr5.4:24811905-24811924 | MS.gene070347:CDS | 35.0% | |
| TCTGATTCTACAATCCAAAG+GGG | - | chr5.4:24812480-24812499 | None:intergenic | 35.0% | |
| TGCACCAAATACTATCTCAT+TGG | - | chr5.4:24815088-24815107 | None:intergenic | 35.0% | |
| TGTGCTTATCAATACGAAAG+TGG | + | chr5.4:24813651-24813670 | MS.gene070347:CDS | 35.0% | |
| TTGCAATTCCTGCAGATTTA+AGG | - | chr5.4:24813763-24813782 | None:intergenic | 35.0% | |
| TTTAAGTGAGAACACCCATT+TGG | - | chr5.4:24811430-24811449 | None:intergenic | 35.0% | |
| ! | ATTCAAGGGTTTGTTTGGAT+TGG | + | chr5.4:24813095-24813114 | MS.gene070347:intron | 35.0% |
| ! | CTTCAGATTAAAAGCGTATC+TGG | - | chr5.4:24811762-24811781 | None:intergenic | 35.0% |
| ! | GAAATAGATGAGGATAATGG+TGG | - | chr5.4:24811272-24811291 | None:intergenic | 35.0% |
| ! | GCCTCAGTAATGGAAATAAT+GGG | + | chr5.4:24814538-24814557 | MS.gene070347:CDS | 35.0% |
| ! | TCGGTGTCTTTAATCATGAA+AGG | - | chr5.4:24814727-24814746 | None:intergenic | 35.0% |
| !! | AGACAGTTGTGTTCTAGTTT+AGG | - | chr5.4:24813018-24813037 | None:intergenic | 35.0% |
| !! | ATGCTAGCTTTAGAGAACAA+AGG | - | chr5.4:24814290-24814309 | None:intergenic | 35.0% |
| !! | CTTTCAGGTTGATGGAATAA+AGG | - | chr5.4:24814604-24814623 | None:intergenic | 35.0% |
| !! | GCTGTTTTCATAAGTTATCC+TGG | - | chr5.4:24813229-24813248 | None:intergenic | 35.0% |
| !!! | TCTATACCTTTTTTGGTGGT+TGG | - | chr5.4:24811453-24811472 | None:intergenic | 35.0% |
| AAGGTCTCTTTGCATCCATT+GGG | + | chr5.4:24814494-24814513 | MS.gene070347:CDS | 40.0% | |
| ACAATCCAAAGGGGAGAATA+GGG | - | chr5.4:24812471-24812490 | None:intergenic | 40.0% | |
| ACTTGCAGGTGAAATAGATG+AGG | - | chr5.4:24811282-24811301 | None:intergenic | 40.0% | |
| AGTGTATGCCTTAAATCTGC+AGG | + | chr5.4:24813752-24813771 | MS.gene070347:intron | 40.0% | |
| ATTGCAAATGTGCAGATAGC+AGG | + | chr5.4:24812743-24812762 | MS.gene070347:intron | 40.0% | |
| ATTGGTAAGAAGCTTCCCAA+TGG | - | chr5.4:24814512-24814531 | None:intergenic | 40.0% | |
| CAAGCATTTATCTGCCTTTC+AGG | - | chr5.4:24814619-24814638 | None:intergenic | 40.0% | |
| CTGAAAGGCAGATAAATGCT+TGG | + | chr5.4:24814617-24814636 | MS.gene070347:CDS | 40.0% | |
| GAAATGACCCTTGTCATTCA+TGG | - | chr5.4:24812443-24812462 | None:intergenic | 40.0% | |
| GGATATTCTGGACATGTTGA+TGG | + | chr5.4:24812793-24812812 | MS.gene070347:CDS | 40.0% | |
| GTAGGATGAGTGAGATCATA+AGG | - | chr5.4:24812097-24812116 | None:intergenic | 40.0% | |
| GTCTGTAGTTATCAAGCCTT+TGG | + | chr5.4:24815131-24815150 | MS.gene070347:CDS | 40.0% | |
| GTTAGTATCAATCTCGTGTC+TGG | - | chr5.4:24811517-24811536 | None:intergenic | 40.0% | |
| GTTTGAGAGTGGATACAATG+TGG | + | chr5.4:24811916-24811935 | MS.gene070347:CDS | 40.0% | |
| TACAATCCAAAGGGGAGAAT+AGG | - | chr5.4:24812472-24812491 | None:intergenic | 40.0% | |
| TCATCAACAGTAATCCCCTT+TGG | - | chr5.4:24812847-24812866 | None:intergenic | 40.0% | |
| TCGTCTTCTGATGGAATCAA+AGG | - | chr5.4:24814457-24814476 | None:intergenic | 40.0% | |
| TCTACGTGTCAATGTAGTCT+CGG | - | chr5.4:24811671-24811690 | None:intergenic | 40.0% | |
| TCTACTTTGAACAGCAGAGT+TGG | + | chr5.4:24813375-24813394 | MS.gene070347:intron | 40.0% | |
| TCTTCTGATGGAATCAAAGG+CGG | - | chr5.4:24814454-24814473 | None:intergenic | 40.0% | |
| TGAGTGAATGACTTACTTGC+AGG | - | chr5.4:24811296-24811315 | None:intergenic | 40.0% | |
| TGGCCTAAAGCAACATTTAC+AGG | - | chr5.4:24813068-24813087 | None:intergenic | 40.0% | |
| TGGCTTCTTTGGTTATATGC+TGG | + | chr5.4:24813796-24813815 | MS.gene070347:CDS | 40.0% | |
| TGTACCTGCTTTCACCAAAT+GGG | + | chr5.4:24811413-24811432 | MS.gene070347:CDS | 40.0% | |
| TTACTATGAGCAAAGTCGTG+AGG | + | chr5.4:24815059-24815078 | MS.gene070347:CDS | 40.0% | |
| TTCCCTTCTTGTCATTGACA+GGG | + | chr5.4:24813587-24813606 | MS.gene070347:CDS | 40.0% | |
| TTTGCAACTCCTTGCATCTA+TGG | + | chr5.4:24812642-24812661 | MS.gene070347:intron | 40.0% | |
| TTTGTGTAAGTGTGCCAATG+TGG | + | chr5.4:24812063-24812082 | MS.gene070347:intron | 40.0% | |
| ! | AACGGCTTTTGGTAAAGACT+CGG | - | chr5.4:24814418-24814437 | None:intergenic | 40.0% |
| ! | AATTGAGCCTTATGCAGTTG+AGG | + | chr5.4:24811967-24811986 | MS.gene070347:CDS | 40.0% |
| ! | AGAAAGTGCACACATACCAA+TGG | - | chr5.4:24812701-24812720 | None:intergenic | 40.0% |
| ! | CATACCAATGGTTTCAAGTG+AGG | - | chr5.4:24812689-24812708 | None:intergenic | 40.0% |
| ! | GGATATGTTTTCTTAGGGGT+TGG | - | chr5.4:24814706-24814725 | None:intergenic | 40.0% |
| ! | GGCCTCAGTAATGGAAATAA+TGG | + | chr5.4:24814537-24814556 | MS.gene070347:CDS | 40.0% |
| ! | TACGAAAGTGGATTTCCACT+CGG | + | chr5.4:24813663-24813682 | MS.gene070347:CDS | 40.0% |
| !! | CAGGTTGATGGAATAAAGGT+TGG | - | chr5.4:24814600-24814619 | None:intergenic | 40.0% |
| !! | TATTCTATGAAGCACCGACA+CGG | - | chr5.4:24814061-24814080 | None:intergenic | 40.0% |
| !! | TTAGAAGTATCTGGTGTCTG+AGG | + | chr5.4:24811561-24811580 | MS.gene070347:intron | 40.0% |
| !! | TTATCTGCCTTTCAGGTTGA+TGG | - | chr5.4:24814612-24814631 | None:intergenic | 40.0% |
| AGATAGCAGGCCAAAACTTG+TGG | + | chr5.4:24812756-24812775 | MS.gene070347:intron | 45.0% | |
| AGGAAAATTAAGCCGTGGAG+GGG | + | chr5.4:24813491-24813510 | MS.gene070347:CDS | 45.0% | |
| CAACAGTAATCCCCTTTGGA+TGG | - | chr5.4:24812843-24812862 | None:intergenic | 45.0% | |
| CAATGGGGAACTTCTGATTC+TGG | + | chr5.4:24811997-24812016 | MS.gene070347:CDS | 45.0% | |
| CACATGTACAATGGATGGGA+AGG | + | chr5.4:24814832-24814851 | MS.gene070347:CDS | 45.0% | |
| CAGAATCAGAAGTTCCCCAT+TGG | - | chr5.4:24811999-24812018 | None:intergenic | 45.0% | |
| CTACGTGTCAATGTAGTCTC+GGG | - | chr5.4:24811670-24811689 | None:intergenic | 45.0% | |
| CTAGGATGAACCATCCAAAG+GGG | + | chr5.4:24812830-24812849 | MS.gene070347:CDS | 45.0% | |
| CTCATTGTGGTTGCATGACA+TGG | + | chr5.4:24814206-24814225 | MS.gene070347:intron | 45.0% | |
| CTGTACCTGCTTTCACCAAA+TGG | + | chr5.4:24811412-24811431 | MS.gene070347:CDS | 45.0% | |
| GAAGCTTCTTACCAATGCTG+GGG | + | chr5.4:24814516-24814535 | MS.gene070347:CDS | 45.0% | |
| GAAGGTCTCTTTGCATCCAT+TGG | + | chr5.4:24814493-24814512 | MS.gene070347:CDS | 45.0% | |
| GACAACACCTCAACTGCATA+AGG | - | chr5.4:24811977-24811996 | None:intergenic | 45.0% | |
| GAGGAAAATTAAGCCGTGGA+GGG | + | chr5.4:24813490-24813509 | MS.gene070347:CDS | 45.0% | |
| GCAGGAATTGCAATGCTTCT+CGG | + | chr5.4:24813770-24813789 | MS.gene070347:intron | 45.0% | |
| GCTAGGATGAACCATCCAAA+GGG | + | chr5.4:24812829-24812848 | MS.gene070347:CDS | 45.0% | |
| GGAAGCTTCTTACCAATGCT+GGG | + | chr5.4:24814515-24814534 | MS.gene070347:CDS | 45.0% | |
| GGAGTTCTTGGGTCAATAGA+AGG | - | chr5.4:24814685-24814704 | None:intergenic | 45.0% | |
| GGATCTGCTGAAGGATATTC+TGG | + | chr5.4:24812781-24812800 | MS.gene070347:CDS | 45.0% | |
| GTGTTTGATGGAAGCAAGCT+TGG | + | chr5.4:24811944-24811963 | MS.gene070347:CDS | 45.0% | |
| GTTCCCTTCTTGTCATTGAC+AGG | + | chr5.4:24813586-24813605 | MS.gene070347:CDS | 45.0% | |
| GTTCTTGGGTCAATAGAAGG+AGG | - | chr5.4:24814682-24814701 | None:intergenic | 45.0% | |
| GTTGAATGACAGCGATTGCT+GGG | + | chr5.4:24811879-24811898 | MS.gene070347:intron | 45.0% | |
| TCAGGGGTTACAACAATTGC+TGG | + | chr5.4:24813468-24813487 | MS.gene070347:intron | 45.0% | |
| TCCCTTCTTGTCATTGACAG+GGG | + | chr5.4:24813588-24813607 | MS.gene070347:CDS | 45.0% | |
| TCTGCCTCACTTGAAACCAT+TGG | + | chr5.4:24812682-24812701 | MS.gene070347:intron | 45.0% | |
| TCTTAGGGGTTGGAGTTCTT+GGG | - | chr5.4:24814696-24814715 | None:intergenic | 45.0% | |
| TGTTGAATGACAGCGATTGC+TGG | + | chr5.4:24811878-24811897 | MS.gene070347:intron | 45.0% | |
| TTCTTAGGGGTTGGAGTTCT+TGG | - | chr5.4:24814697-24814716 | None:intergenic | 45.0% | |
| TTGAACAGCAGAGTTGGAGT+TGG | + | chr5.4:24813381-24813400 | MS.gene070347:intron | 45.0% | |
| TTGTTCCCTATTCTCCCCTT+TGG | + | chr5.4:24812463-24812482 | MS.gene070347:intron | 45.0% | |
| ! | AACACCCATTTGGTGAAAGC+AGG | - | chr5.4:24811420-24811439 | None:intergenic | 45.0% |
| ! | TGACAGACTTCAACGGCTTT+TGG | - | chr5.4:24814429-24814448 | None:intergenic | 45.0% |
| ! | TGTGGTTGCTGTTGTTGTTG+CGG | - | chr5.4:24814877-24814896 | None:intergenic | 45.0% |
| !! | AGTTGAGGTGTTGTCCAATG+GGG | + | chr5.4:24811982-24812001 | MS.gene070347:CDS | 45.0% |
| !! | ATCTGTATAACGGATGGGAC+GGG | + | chr5.4:24814905-24814924 | MS.gene070347:CDS | 45.0% |
| !! | ATTCTATGAAGCACCGACAC+GGG | - | chr5.4:24814060-24814079 | None:intergenic | 45.0% |
| !! | CAAATGTGTCGGTGTCGTAT+CGG | - | chr5.4:24813968-24813987 | None:intergenic | 45.0% |
| !! | CAGTTGAGGTGTTGTCCAAT+GGG | + | chr5.4:24811981-24812000 | MS.gene070347:CDS | 45.0% |
| !! | CATCTGTATAACGGATGGGA+CGG | + | chr5.4:24814904-24814923 | MS.gene070347:CDS | 45.0% |
| !! | GATAGTATTTGGTGCAGTGC+AGG | + | chr5.4:24815092-24815111 | MS.gene070347:CDS | 45.0% |
| !! | TCGAGCGCTCTATAATGGAT+GGG | + | chr5.4:24814771-24814790 | MS.gene070347:CDS | 45.0% |
| !! | TGAGTGCTTGTCTAGTTCTC+TGG | + | chr5.4:24813873-24813892 | MS.gene070347:intron | 45.0% |
| ACACTGACACCTCAGATGTC+CGG | + | chr5.4:24813939-24813958 | MS.gene070347:intron | 50.0% | |
| AGTGCAGGAACAGGACATGA+AGG | + | chr5.4:24815107-24815126 | MS.gene070347:CDS | 50.0% | |
| CAAGGTCGAGCGCTCTATAA+TGG | + | chr5.4:24814766-24814785 | MS.gene070347:CDS | 50.0% | |
| CCCCCTGTCAATGACAAGAA+GGG | - | chr5.4:24813592-24813611 | None:intergenic | 50.0% | |
| CCCTTCTTGTCATTGACAGG+GGG | + | chr5.4:24813589-24813608 | MS.gene070347:CDS | 50.0% | |
| CGATACGACACCGACACATT+TGG | + | chr5.4:24813966-24813985 | MS.gene070347:intron | 50.0% | |
| CTTCACTTGGTCCATCGACA+TGG | - | chr5.4:24813518-24813537 | None:intergenic | 50.0% | |
| GAAGGAGGCTCGTCTTCATT+TGG | - | chr5.4:24814667-24814686 | None:intergenic | 50.0% | |
| GCTGGAGGAAAATTAAGCCG+TGG | + | chr5.4:24813486-24813505 | MS.gene070347:CDS | 50.0% | |
| GGAAAATTAAGCCGTGGAGG+GGG | + | chr5.4:24813492-24813511 | MS.gene070347:CDS | 50.0% | |
| GGAGGAAAATTAAGCCGTGG+AGG | + | chr5.4:24813489-24813508 | MS.gene070347:CDS | 50.0% | |
| GGCTAGGATGAACCATCCAA+AGG | + | chr5.4:24812828-24812847 | MS.gene070347:CDS | 50.0% | |
| GGGAAGCTTCTTACCAATGC+TGG | + | chr5.4:24814514-24814533 | MS.gene070347:CDS | 50.0% | |
| GGGGTTACAACAATTGCTGG+AGG | + | chr5.4:24813471-24813490 | MS.gene070347:intron | 50.0% | |
| TCCCCCTGTCAATGACAAGA+AGG | - | chr5.4:24813593-24813612 | None:intergenic | 50.0% | |
| TGTCGATGGACCAAGTGAAG+AGG | + | chr5.4:24813518-24813537 | MS.gene070347:CDS | 50.0% | |
| ! | ATTGCAATGCTTCTCGGTGC+TGG | + | chr5.4:24813776-24813795 | MS.gene070347:CDS | 50.0% |
| ! | GCAGATCCTGCCACAAGTTT+TGG | - | chr5.4:24812769-24812788 | None:intergenic | 50.0% |
| ! | GGTTGCTGTTGTTGTTGCTG+CGG | - | chr5.4:24814874-24814893 | None:intergenic | 50.0% |
| ! | GTCGAGCGCTCTATAATGGA+TGG | + | chr5.4:24814770-24814789 | MS.gene070347:CDS | 50.0% |
| !! | ATTTGGTGCAGTGCAGGAAC+AGG | + | chr5.4:24815098-24815117 | MS.gene070347:CDS | 50.0% |
| !! | GCAGTTGAGGTGTTGTCCAA+TGG | + | chr5.4:24811980-24811999 | MS.gene070347:CDS | 50.0% |
| !! | GCGCTCTATAATGGATGGGA+AGG | + | chr5.4:24814775-24814794 | MS.gene070347:CDS | 50.0% |
| !! | GGGATTACTGTTGATGACCG+AGG | + | chr5.4:24812850-24812869 | MS.gene070347:CDS | 50.0% |
| !! | TCTGTATAACGGATGGGACG+GGG | + | chr5.4:24814906-24814925 | MS.gene070347:CDS | 50.0% |
| ACAGGGGGAATCAAGCCATC+AGG | + | chr5.4:24813604-24813623 | MS.gene070347:CDS | 55.0% | |
| AGCAGGCCAAAACTTGTGGC+AGG | + | chr5.4:24812760-24812779 | MS.gene070347:CDS | 55.0% | |
| CAATGCTGGGGCCTCAGTAA+TGG | + | chr5.4:24814528-24814547 | MS.gene070347:CDS | 55.0% | |
| CAGGGGGAATCAAGCCATCA+GGG | + | chr5.4:24813605-24813624 | MS.gene070347:CDS | 55.0% | |
| CATTACTGAGGCCCCAGCAT+TGG | - | chr5.4:24814530-24814549 | None:intergenic | 55.0% | |
| CTTGTGGCAGGATCTGCTGA+AGG | + | chr5.4:24812772-24812791 | MS.gene070347:CDS | 55.0% | |
| GGACACAGACACAAGCACAC+TGG | - | chr5.4:24814027-24814046 | None:intergenic | 55.0% | |
| GGCGGTCTGACAGACTTCAA+CGG | - | chr5.4:24814436-24814455 | None:intergenic | 55.0% | |
| TATCGGACACCGGACATCTG+AGG | - | chr5.4:24813951-24813970 | None:intergenic | 55.0% | |
| TCCAGTGTTTGTGCCCGTGT+CGG | + | chr5.4:24814044-24814063 | MS.gene070347:intron | 55.0% | |
| TCGCAGCTGAATCTCCCTGA+TGG | - | chr5.4:24813622-24813641 | None:intergenic | 55.0% | |
| !! | CTTCTCGGTGCTGGCTTCTT+TGG | + | chr5.4:24813785-24813804 | MS.gene070347:CDS | 55.0% |
| ACCGACACGGGCACAAACAC+TGG | - | chr5.4:24814048-24814067 | None:intergenic | 60.0% | |
| !! | GTCGGTGTCGTATCGGACAC+CGG | - | chr5.4:24813961-24813980 | None:intergenic | 60.0% |
| CATCGACATGGCCCCCTCCA+CGG | - | chr5.4:24813506-24813525 | None:intergenic | 65.0% | |
| CGTGGAGGGGGCCATGTCGA+TGG | + | chr5.4:24813504-24813523 | MS.gene070347:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 24811203 | 24815221 | 24811203 | ID=MS.gene070347 |
| chr5.4 | mRNA | 24811203 | 24815221 | 24811203 | ID=MS.gene070347.t1;Parent=MS.gene070347 |
| chr5.4 | exon | 24811203 | 24811299 | 24811203 | ID=MS.gene070347.t1.exon1;Parent=MS.gene070347.t1 |
| chr5.4 | CDS | 24811203 | 24811299 | 24811203 | ID=cds.MS.gene070347.t1;Parent=MS.gene070347.t1 |
| chr5.4 | exon | 24811385 | 24811465 | 24811385 | ID=MS.gene070347.t1.exon2;Parent=MS.gene070347.t1 |
| chr5.4 | CDS | 24811385 | 24811465 | 24811385 | ID=cds.MS.gene070347.t1;Parent=MS.gene070347.t1 |
| chr5.4 | exon | 24811891 | 24812067 | 24811891 | ID=MS.gene070347.t1.exon3;Parent=MS.gene070347.t1 |
| chr5.4 | CDS | 24811891 | 24812067 | 24811891 | ID=cds.MS.gene070347.t1;Parent=MS.gene070347.t1 |
| chr5.4 | exon | 24812758 | 24812928 | 24812758 | ID=MS.gene070347.t1.exon4;Parent=MS.gene070347.t1 |
| chr5.4 | CDS | 24812758 | 24812928 | 24812758 | ID=cds.MS.gene070347.t1;Parent=MS.gene070347.t1 |
| chr5.4 | exon | 24813472 | 24813684 | 24813472 | ID=MS.gene070347.t1.exon5;Parent=MS.gene070347.t1 |
| chr5.4 | CDS | 24813472 | 24813684 | 24813472 | ID=cds.MS.gene070347.t1;Parent=MS.gene070347.t1 |
| chr5.4 | exon | 24813774 | 24813871 | 24813774 | ID=MS.gene070347.t1.exon6;Parent=MS.gene070347.t1 |
| chr5.4 | CDS | 24813774 | 24813871 | 24813774 | ID=cds.MS.gene070347.t1;Parent=MS.gene070347.t1 |
| chr5.4 | exon | 24814385 | 24815221 | 24814385 | ID=MS.gene070347.t1.exon7;Parent=MS.gene070347.t1 |
| chr5.4 | CDS | 24814385 | 24815221 | 24814385 | ID=cds.MS.gene070347.t1;Parent=MS.gene070347.t1 |
| Gene Sequence |
| Protein sequence |
