Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71002.t1 | XP_013445926.1 | 97.7 | 521 | 7 | 2 | 1 | 516 | 1 | 521 | 1.10E-261 | 912.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71002.t1 | A0A072TSZ3 | 97.7 | 521 | 7 | 2 | 1 | 516 | 1 | 521 | 8.2e-262 | 912.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71002 | MS.gene009144 | PPI |
| MS.gene71002 | MS.gene027598 | PPI |
| MS.gene71002 | MS.gene45070 | PPI |
| MS.gene027590 | MS.gene71002 | PPI |
| MS.gene71002 | MS.gene038604 | PPI |
| MS.gene43884 | MS.gene71002 | PPI |
| MS.gene009144 | MS.gene71002 | PPI |
| MS.gene71002 | MS.gene070347 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71002.t1 | MTR_8g063760 | 97.313 | 521 | 9 | 2 | 1 | 516 | 1 | 521 | 0.0 | 1041 |
| MS.gene71002.t1 | MTR_5g034750 | 67.332 | 551 | 116 | 10 | 22 | 516 | 18 | 560 | 0.0 | 676 |
| MS.gene71002.t1 | MTR_6g007720 | 48.785 | 576 | 219 | 13 | 1 | 516 | 1 | 560 | 4.13e-169 | 489 |
| MS.gene71002.t1 | MTR_2g075860 | 40.722 | 388 | 191 | 9 | 14 | 394 | 10 | 365 | 1.89e-78 | 254 |
| MS.gene71002.t1 | MTR_5g034550 | 63.750 | 160 | 33 | 3 | 119 | 264 | 1 | 149 | 3.06e-58 | 190 |
| MS.gene71002.t1 | MTR_8g058630 | 58.993 | 139 | 56 | 1 | 121 | 259 | 13 | 150 | 1.04e-48 | 165 |
| MS.gene71002.t1 | MTR_8g063700 | 38.916 | 203 | 113 | 6 | 71 | 267 | 31 | 228 | 2.16e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71002.t1 | AT1G70280 | 65.451 | 466 | 141 | 6 | 24 | 485 | 20 | 469 | 0.0 | 564 |
| MS.gene71002.t1 | AT1G23880 | 61.237 | 485 | 161 | 8 | 1 | 482 | 61 | 521 | 0.0 | 560 |
| MS.gene71002.t1 | AT1G70280 | 66.667 | 423 | 121 | 6 | 67 | 485 | 1 | 407 | 0.0 | 523 |
| MS.gene71002.t1 | AT1G23880 | 62.830 | 417 | 134 | 5 | 67 | 482 | 1 | 397 | 4.76e-174 | 497 |
| MS.gene71002.t1 | AT5G14890 | 47.937 | 509 | 199 | 14 | 20 | 514 | 21 | 477 | 3.67e-142 | 418 |
| MS.gene71002.t1 | AT3G14860 | 41.499 | 347 | 172 | 8 | 52 | 394 | 55 | 374 | 1.11e-74 | 244 |
| MS.gene71002.t1 | AT3G14860 | 40.922 | 347 | 173 | 7 | 52 | 394 | 55 | 373 | 1.52e-74 | 244 |
| MS.gene71002.t1 | AT1G23890 | 48.023 | 177 | 87 | 4 | 63 | 237 | 18 | 191 | 1.63e-42 | 152 |
| MS.gene71002.t1 | AT1G23890 | 49.412 | 170 | 81 | 4 | 70 | 237 | 25 | 191 | 1.66e-41 | 154 |
Find 121 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTTCAGAACTTGTTTC+TGG | 0.022910 | 8.4:+37453231 | MS.gene71002:intron |
| CTCATTCTTCATCTTCTCTT+TGG | 0.186851 | 8.4:+37453082 | MS.gene71002:CDS |
| CTTGTTGGGGCTGGTTTCTT+TGG | 0.229956 | 8.4:+37455780 | MS.gene71002:CDS |
| CAGGAATTGCAATGCTTGTT+GGG | 0.255059 | 8.4:+37455766 | MS.gene71002:intron |
| TGTTGCAGATACTGCAAATA+TGG | 0.266517 | 8.4:+37455228 | MS.gene71002:CDS |
| AAGCAGGAAGAAAGTTTCTT+TGG | 0.273520 | 8.4:+37456249 | MS.gene71002:CDS |
| TCCATATTCCATACCAGTTT+TGG | 0.280048 | 8.4:-37453313 | None:intergenic |
| TCAGTGCTTGCCTTTGAAAT+TGG | 0.286658 | 8.4:-37456368 | None:intergenic |
| TCACTTGCTTCTGAGATTGT+TGG | 0.308982 | 8.4:-37456392 | None:intergenic |
| CAGAGGAAACCAAGCCATTA+GGG | 0.312716 | 8.4:+37455579 | MS.gene71002:CDS |
| GGATCAGCTGAAGGATATTC+TGG | 0.315805 | 8.4:+37455127 | MS.gene71002:CDS |
| CAACAATTGCTGGAGGAAAA+TGG | 0.329939 | 8.4:+37455452 | MS.gene71002:CDS |
| GAAAGTTTCTTTGGATCTCT+TGG | 0.345987 | 8.4:+37456258 | MS.gene71002:CDS |
| ACAGAGGAAACCAAGCCATT+AGG | 0.349242 | 8.4:+37455578 | MS.gene71002:CDS |
| GCAGGAATTGCAATGCTTGT+TGG | 0.361301 | 8.4:+37455765 | MS.gene71002:intron |
| CTCGTCAATGGTGGAGATAA+TGG | 0.361575 | 8.4:+37456302 | MS.gene71002:CDS |
| TCATTTCAGAACTTGTTTCT+GGG | 0.363224 | 8.4:+37453232 | MS.gene71002:intron |
| ATACTGCAAATATGGCAATT+AGG | 0.364589 | 8.4:+37455236 | MS.gene71002:CDS |
| GTCATCACACCTGTTGAATA+TGG | 0.365763 | 8.4:+37456777 | MS.gene71002:CDS |
| TCAGGGGTCACAACAATTGC+TGG | 0.373460 | 8.4:+37455442 | MS.gene71002:intron |
| ATTAGGAAAATTAGTGATTC+GGG | 0.377436 | 8.4:+37455253 | MS.gene71002:CDS |
| CTTAAAGCTACCACCAAAAC+TGG | 0.381528 | 8.4:+37453300 | MS.gene71002:CDS |
| GATGATTGTGCATATCGATA+TGG | 0.382744 | 8.4:+37455619 | MS.gene71002:CDS |
| AATTAGGAAAATTAGTGATT+CGG | 0.383780 | 8.4:+37455252 | MS.gene71002:CDS |
| TCATCAACAGTTATCCCCTT+TGG | 0.399379 | 8.4:-37455190 | None:intergenic |
| GACATGTTGATGGGAGGCTC+AGG | 0.403629 | 8.4:+37455149 | MS.gene71002:CDS |
| TGGTTTCTTTGGTTATATGC+TGG | 0.403960 | 8.4:+37455791 | MS.gene71002:CDS |
| GGTGCCCTTGTGTCGATAGA+TGG | 0.413822 | 8.4:-37456465 | None:intergenic |
| TGTGGTCTTCTTCTGAAAAC+AGG | 0.420773 | 8.4:-37456336 | None:intergenic |
| CTTGCAGGTGAAGTGGTTGA+TGG | 0.422939 | 8.4:-37453133 | None:intergenic |
| GCTGATCCAGCTACCAGCTT+CGG | 0.423195 | 8.4:-37455112 | None:intergenic |
| CTCAGAAGCAAGTGAATGAT+TGG | 0.423951 | 8.4:+37456400 | MS.gene71002:CDS |
| GGTAAGCTTCTTGCGAATGC+TGG | 0.432610 | 8.4:+37456279 | MS.gene71002:CDS |
| TGGAGGCCTTACAGATTTCA+AGG | 0.434455 | 8.4:-37456199 | None:intergenic |
| AATGTGGAAACTGTGTTTGA+TGG | 0.436794 | 8.4:+37453474 | MS.gene71002:CDS |
| GACTTTGATGTGGTTTATGT+TGG | 0.439630 | 8.4:+37455529 | MS.gene71002:CDS |
| GTTGGATCTCCCTAATGGCT+TGG | 0.442364 | 8.4:-37455588 | None:intergenic |
| TGCAGATAGCAGACCGAAGC+TGG | 0.448340 | 8.4:+37455099 | MS.gene71002:intron |
| GCATTGCTGCAGCGTAGGCT+CGG | 0.449626 | 8.4:+37455813 | MS.gene71002:CDS |
| TGCAAAACCTCAACAGCATA+AGG | 0.450890 | 8.4:-37453516 | None:intergenic |
| TATGGCAGTGATTTCCCTCT+TGG | 0.451443 | 8.4:+37455637 | MS.gene71002:CDS |
| ACAGAAGGCATTACTGTTAG+TGG | 0.454864 | 8.4:-37456153 | None:intergenic |
| CGGTACAATTGTAGAATCTC+AGG | 0.455028 | 8.4:+37455833 | MS.gene71002:CDS |
| TGCGAATGCTGGCTCGTCAA+TGG | 0.455318 | 8.4:+37456290 | MS.gene71002:CDS |
| AGCAGACCGAAGCTGGTAGC+TGG | 0.459795 | 8.4:+37455106 | MS.gene71002:CDS |
| CACAATCATCAAAGTGGAGT+TGG | 0.462222 | 8.4:-37455606 | None:intergenic |
| ATTGCAATGCTTGTTGGGGC+TGG | 0.462265 | 8.4:+37455771 | MS.gene71002:CDS |
| TCGTCAATGGTGGAGATAAT+GGG | 0.467902 | 8.4:+37456303 | MS.gene71002:CDS |
| TCATATTCTGATGGAATCAA+TGG | 0.473880 | 8.4:-37456219 | None:intergenic |
| ATCACGAAACTTTCCTGTGC+TGG | 0.477387 | 8.4:-37456423 | None:intergenic |
| GCAGGAACAGGAGGGGAAGA+AGG | 0.479757 | 8.4:+37456746 | MS.gene71002:CDS |
| GAAAATTTAGCTTCTTCACT+TGG | 0.479921 | 8.4:-37455502 | None:intergenic |
| AGGAAAATGGAGCCGTGGAG+GGG | 0.481087 | 8.4:+37455465 | MS.gene71002:CDS |
| GGAAAATGGAGCCGTGGAGG+GGG | 0.481323 | 8.4:+37455466 | MS.gene71002:CDS |
| GGATATTCTGGACATGTTGA+TGG | 0.492558 | 8.4:+37455139 | MS.gene71002:CDS |
| AATGAGCCTCCATATTCAAC+AGG | 0.498016 | 8.4:-37456786 | None:intergenic |
| GAGGAAAATGGAGCCGTGGA+GGG | 0.498407 | 8.4:+37455464 | MS.gene71002:CDS |
| GTGGAGTTGGATCTCCCTAA+TGG | 0.498446 | 8.4:-37455593 | None:intergenic |
| ATGGGAGGCTCAGGGAGGCT+AGG | 0.499515 | 8.4:+37455158 | MS.gene71002:CDS |
| AGAATATGAACCCGAAAAGC+AGG | 0.507195 | 8.4:+37456233 | MS.gene71002:CDS |
| TTCCTCTGTCTACAACAAGC+AGG | 0.507435 | 8.4:-37455564 | None:intergenic |
| AAAAGCCCTTGAAATCTGTA+AGG | 0.509266 | 8.4:+37456193 | MS.gene71002:CDS |
| TGGGGCAGTGCAGGAACAGG+AGG | 0.528931 | 8.4:+37456737 | MS.gene71002:CDS |
| AGTGAATGATTGGCCAGCAC+AGG | 0.531678 | 8.4:+37456410 | MS.gene71002:CDS |
| GCATTCTACAGCGGGTGGGA+TGG | 0.534762 | 8.4:+37456558 | MS.gene71002:CDS |
| TCTGCATCTTTCGACATGAA+AGG | 0.538618 | 8.4:-37456507 | None:intergenic |
| GGCTGCTGTTGTTGTTGATG+TGG | 0.540640 | 8.4:-37456612 | None:intergenic |
| CAACAGTTATCCCCTTTGGA+TGG | 0.541128 | 8.4:-37455186 | None:intergenic |
| ATCTTTCGACATGAAAGGAT+AGG | 0.541256 | 8.4:-37456502 | None:intergenic |
| GGAGGAAAATGGAGCCGTGG+AGG | 0.541631 | 8.4:+37455463 | MS.gene71002:CDS |
| AATTGAGCCTTATGCTGTTG+AGG | 0.544199 | 8.4:+37453509 | MS.gene71002:CDS |
| TGTTGTTGTTGATGTGGTTG+CGG | 0.544910 | 8.4:-37456606 | None:intergenic |
| TCGGTCTCGAATGAGTTACA+TGG | 0.544992 | 8.4:+37456827 | MS.gene71002:CDS |
| GTGTTTGATGGAAGTAAGCT+TGG | 0.547130 | 8.4:+37453486 | MS.gene71002:CDS |
| AAAGTAAAGCATTCTACAGC+GGG | 0.550622 | 8.4:+37456550 | MS.gene71002:CDS |
| GTGATGAAGAGATTCTGTAA+AGG | 0.551414 | 8.4:-37453578 | None:intergenic |
| GTGCTTGCCTTTGAAATTGG+TGG | 0.551930 | 8.4:-37456365 | None:intergenic |
| CTGCAACATAAATATTTCCT+CGG | 0.552933 | 8.4:-37455213 | None:intergenic |
| GCTAGGATGAACCATCCAAA+GGG | 0.554047 | 8.4:+37455175 | MS.gene71002:CDS |
| GATATTCTGGACATGTTGAT+GGG | 0.558030 | 8.4:+37455140 | MS.gene71002:CDS |
| CGGTCTCGAATGAGTTACAT+GGG | 0.565662 | 8.4:+37456828 | MS.gene71002:CDS |
| ACATGTTGATGGGAGGCTCA+GGG | 0.573249 | 8.4:+37455150 | MS.gene71002:CDS |
| AAGTGTGAGGGACCGACGAT+TGG | 0.581409 | 8.4:-37456674 | None:intergenic |
| CTGGTAGCTGGATCAGCTGA+AGG | 0.583900 | 8.4:+37455118 | MS.gene71002:CDS |
| GATATGCACAATCATCAAAG+TGG | 0.588148 | 8.4:-37455612 | None:intergenic |
| GGGGCAGTGCAGGAACAGGA+GGG | 0.589930 | 8.4:+37456738 | MS.gene71002:CDS |
| TGCTGGCATTGCTGCAGCGT+AGG | 0.592474 | 8.4:+37455808 | MS.gene71002:CDS |
| GGAGGCCTTACAGATTTCAA+GGG | 0.593740 | 8.4:-37456198 | None:intergenic |
| GGCTAGGATGAACCATCCAA+AGG | 0.596756 | 8.4:+37455174 | MS.gene71002:CDS |
| AGAGCTACCACCAATTTCAA+AGG | 0.597932 | 8.4:+37456358 | MS.gene71002:CDS |
| GGACCGACGATTGGTACTGA+TGG | 0.601463 | 8.4:-37456665 | None:intergenic |
| GTACTTACTTGCAGGTGAAG+TGG | 0.615067 | 8.4:-37453140 | None:intergenic |
| AGGAATTGCAATGCTTGTTG+GGG | 0.616374 | 8.4:+37455767 | MS.gene71002:intron |
| TCCCTGCTTGTTGTAGACAG+AGG | 0.617020 | 8.4:+37455562 | MS.gene71002:CDS |
| GGGCAGTGCAGGAACAGGAG+GGG | 0.624818 | 8.4:+37456739 | MS.gene71002:CDS |
| TCCTCTGTCTACAACAAGCA+GGG | 0.626459 | 8.4:-37455563 | None:intergenic |
| GTAAAGCATTCTACAGCGGG+TGG | 0.626899 | 8.4:+37456553 | MS.gene71002:CDS |
| TATGCAGTTTGAGAAACAGA+AGG | 0.631848 | 8.4:-37456168 | None:intergenic |
| TGAAATTGGTGGTAGCTCTG+TGG | 0.637791 | 8.4:-37456354 | None:intergenic |
| ATCACACCTGTTGAATATGG+AGG | 0.639031 | 8.4:+37456780 | MS.gene71002:CDS |
| AACCACCATCTATCGACACA+AGG | 0.640539 | 8.4:+37456460 | MS.gene71002:CDS |
| TAAAGCATTCTACAGCGGGT+GGG | 0.645434 | 8.4:+37456554 | MS.gene71002:CDS |
| TATTCTGATGGAATCAATGG+AGG | 0.648038 | 8.4:-37456216 | None:intergenic |
| CTTCACTTGGTCCATCAACG+TGG | 0.652333 | 8.4:-37455489 | None:intergenic |
| TCAATGATGAAGTTTGAGAG+TGG | 0.653433 | 8.4:+37453447 | MS.gene71002:CDS |
| GGAGGGGAAGAAGGAATCTG+TGG | 0.656900 | 8.4:+37456755 | MS.gene71002:CDS |
| ATTCTGGACATGTTGATGGG+AGG | 0.671648 | 8.4:+37455143 | MS.gene71002:CDS |
| GTTTGAGAGTGGTTACAATG+TGG | 0.673385 | 8.4:+37453458 | MS.gene71002:CDS |
| GCTGGAGGAAAATGGAGCCG+TGG | 0.674332 | 8.4:+37455460 | MS.gene71002:CDS |
| TCGCCATCAGTACCAATCGT+CGG | 0.674819 | 8.4:+37456662 | MS.gene71002:CDS |
| GGGGTCACAACAATTGCTGG+AGG | 0.677079 | 8.4:+37455445 | MS.gene71002:intron |
| GATGGTGGTTCGTCTTCGCG+AGG | 0.678196 | 8.4:-37456447 | None:intergenic |
| CAAAGTAAAGCATTCTACAG+CGG | 0.680426 | 8.4:+37456549 | MS.gene71002:CDS |
| GGGATAACTGTTGATGACCG+AGG | 0.680794 | 8.4:+37455196 | MS.gene71002:CDS |
| GAATGCTGGCTCGTCAATGG+TGG | 0.682237 | 8.4:+37456293 | MS.gene71002:CDS |
| AAGCAATGAGACAACCAATG+AGG | 0.687276 | 8.4:+37456707 | MS.gene71002:CDS |
| ACCACCATCTATCGACACAA+GGG | 0.689737 | 8.4:+37456461 | MS.gene71002:CDS |
| GCCCTTGTGTCGATAGATGG+TGG | 0.693655 | 8.4:-37456462 | None:intergenic |
| TCAATGGTGGAGATAATGGG+AGG | 0.703995 | 8.4:+37456306 | MS.gene71002:CDS |
| TGTTGATGGGAGGCTCAGGG+AGG | 0.745216 | 8.4:+37455153 | MS.gene71002:CDS |
| CTAGGATGAACCATCCAAAG+GGG | 0.746879 | 8.4:+37455176 | MS.gene71002:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAACAAAACAAAAAA+TGG | - | chr8.4:37453362-37453381 | None:intergenic | 10.0% |
| !!! | ATTTAATGATTATTACTTTT+TGG | + | chr8.4:37453711-37453730 | MS.gene71002:intron | 10.0% |
| !!! | TGTTTTTTAGATTTATAATT+TGG | + | chr8.4:37453673-37453692 | MS.gene71002:intron | 10.0% |
| !!! | AATTAAGATATCTTTTTTTC+AGG | + | chr8.4:37455424-37455443 | MS.gene71002:intron | 15.0% |
| !!! | ATTAAGATATCTTTTTTTCA+GGG | + | chr8.4:37455425-37455444 | MS.gene71002:intron | 15.0% |
| !!! | TTGAATTTTTATAACACAAT+TGG | + | chr8.4:37455900-37455919 | MS.gene71002:intron | 15.0% |
| !! | AATTAGGAAAATTAGTGATT+CGG | + | chr8.4:37455252-37455271 | MS.gene71002:CDS | 20.0% |
| !! | ATCTCTTCATTGTATTATAT+TGG | + | chr8.4:37453852-37453871 | MS.gene71002:intron | 20.0% |
| !! | ATTAAAACATCTTATAGCTT+TGG | - | chr8.4:37454753-37454772 | None:intergenic | 20.0% |
| !! | TACACAAAATTCAATCATTT+AGG | - | chr8.4:37455342-37455361 | None:intergenic | 20.0% |
| !! | TTCAATATAAATACATCAGA+AGG | - | chr8.4:37455885-37455904 | None:intergenic | 20.0% |
| !!! | ACTTTTATCATAAAGTTTAC+TGG | - | chr8.4:37455388-37455407 | None:intergenic | 20.0% |
| !!! | TTAAGATATCTTTTTTTCAG+GGG | + | chr8.4:37455426-37455445 | MS.gene71002:intron | 20.0% |
| ! | AAAAACAATATATCACCAAG+AGG | - | chr8.4:37455298-37455317 | None:intergenic | 25.0% |
| ! | AAAACAATATATCACCAAGA+GGG | - | chr8.4:37455297-37455316 | None:intergenic | 25.0% |
| ! | AATCATTTAGGTATTAAGCA+TGG | - | chr8.4:37455330-37455349 | None:intergenic | 25.0% |
| ! | AATGGAAGCAAAATAAGAAA+TGG | - | chr8.4:37453174-37453193 | None:intergenic | 25.0% |
| ! | ACTAGTGCTTATATAGAATT+TGG | + | chr8.4:37453881-37453900 | MS.gene71002:intron | 25.0% |
| ! | ATACAATGAAGAGATCAAAA+TGG | - | chr8.4:37453847-37453866 | None:intergenic | 25.0% |
| ! | ATGGAAGCAAAATAAGAAAT+GGG | - | chr8.4:37453173-37453192 | None:intergenic | 25.0% |
| ! | ATTAGGAAAATTAGTGATTC+GGG | + | chr8.4:37455253-37455272 | MS.gene71002:CDS | 25.0% |
| ! | ATTATGTTGTGTATAATTGG+TGG | + | chr8.4:37453752-37453771 | MS.gene71002:intron | 25.0% |
| ! | CTAGTGCTTATATAGAATTT+GGG | + | chr8.4:37453882-37453901 | MS.gene71002:intron | 25.0% |
| ! | TCCAAATATTTAATGCATAG+AGG | - | chr8.4:37454521-37454540 | None:intergenic | 25.0% |
| ! | TCCTCTATGCATTAAATATT+TGG | + | chr8.4:37454517-37454536 | MS.gene71002:intron | 25.0% |
| ! | TGGATTATGTTGTGTATAAT+TGG | + | chr8.4:37453749-37453768 | MS.gene71002:intron | 25.0% |
| !! | AGATGATAACTTTGAAGAAA+TGG | - | chr8.4:37453192-37453211 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr8.4:37454626-37454645 | None:intergenic | 25.0% |
| !! | TATAGAATTTGGGATATGTT+TGG | + | chr8.4:37453892-37453911 | MS.gene71002:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr8.4:37454625-37454644 | None:intergenic | 25.0% |
| !!! | AAGATTTTAGTTTTACCAAG+AGG | - | chr8.4:37455655-37455674 | None:intergenic | 25.0% |
| !!! | AGATTTTAGTTTTACCAAGA+GGG | - | chr8.4:37455654-37455673 | None:intergenic | 25.0% |
| !!! | AGCTCCTTTTAAAAAATGAA+AGG | - | chr8.4:37454326-37454345 | None:intergenic | 25.0% |
| !!! | CTCCTTTTAAAAAATGAAAG+GGG | - | chr8.4:37454324-37454343 | None:intergenic | 25.0% |
| !!! | GCTCCTTTTAAAAAATGAAA+GGG | - | chr8.4:37454325-37454344 | None:intergenic | 25.0% |
| !!! | TTCCCCTTTCATTTTTTAAA+AGG | + | chr8.4:37454319-37454338 | MS.gene71002:intron | 25.0% |
| !!! | TTTTGTGTGTTTTTGTTGAA+GGG | + | chr8.4:37453412-37453431 | MS.gene71002:intron | 25.0% |
| !!! | TTTTTGTGTGTTTTTGTTGA+AGG | + | chr8.4:37453411-37453430 | MS.gene71002:intron | 25.0% |
| AAGCAAAATAAGAAATGGGT+TGG | - | chr8.4:37453169-37453188 | None:intergenic | 30.0% | |
| AAGTTACTAAAGACTCTGTT+TGG | - | chr8.4:37454159-37454178 | None:intergenic | 30.0% | |
| AATTGACTACGACTTATATG+TGG | + | chr8.4:37454455-37454474 | MS.gene71002:intron | 30.0% | |
| ACTCATAACATGTTTGTAAG+CGG | - | chr8.4:37454813-37454832 | None:intergenic | 30.0% | |
| ATACTGCAAATATGGCAATT+AGG | + | chr8.4:37455236-37455255 | MS.gene71002:CDS | 30.0% | |
| CAGAAAAAATTCAACAGTTG+CGG | + | chr8.4:37456526-37456545 | MS.gene71002:CDS | 30.0% | |
| CTGCAACATAAATATTTCCT+CGG | - | chr8.4:37455216-37455235 | None:intergenic | 30.0% | |
| TAAAGTTAGTGAGACTGTTT+GGG | + | chr8.4:37453945-37453964 | MS.gene71002:intron | 30.0% | |
| TAAGTCGTAGTCAATTAAAC+AGG | - | chr8.4:37454451-37454470 | None:intergenic | 30.0% | |
| TCATATTCTGATGGAATCAA+TGG | - | chr8.4:37456222-37456241 | None:intergenic | 30.0% | |
| TTAAAGTTAGTGAGACTGTT+TGG | + | chr8.4:37453944-37453963 | MS.gene71002:intron | 30.0% | |
| TTCATATACCTTGTGATCAT+TGG | + | chr8.4:37453631-37453650 | MS.gene71002:intron | 30.0% | |
| TTCTTATCATGCAACTTGTA+AGG | + | chr8.4:37454269-37454288 | MS.gene71002:intron | 30.0% | |
| TTGACATAATCTTCGATACT+TGG | - | chr8.4:37454568-37454587 | None:intergenic | 30.0% | |
| ! | AATTTGGGATATGTTTGGAT+TGG | + | chr8.4:37453897-37453916 | MS.gene71002:intron | 30.0% |
| ! | ATTTTCTGATGACTTTGATG+TGG | + | chr8.4:37455519-37455538 | MS.gene71002:CDS | 30.0% |
| ! | GAAAATTTAGCTTCTTCACT+TGG | - | chr8.4:37455505-37455524 | None:intergenic | 30.0% |
| ! | TCATTTCAGAACTTGTTTCT+GGG | + | chr8.4:37453232-37453251 | MS.gene71002:intron | 30.0% |
| ! | TCTATTATGTTTTCAGCTCA+AGG | - | chr8.4:37454025-37454044 | None:intergenic | 30.0% |
| ! | TTCATTTCAGAACTTGTTTC+TGG | + | chr8.4:37453231-37453250 | MS.gene71002:intron | 30.0% |
| ! | TTGTAAGGTTTTCTTTGACT+TGG | + | chr8.4:37454284-37454303 | MS.gene71002:intron | 30.0% |
| ! | TTTGCTCATAAAAAGTGTGA+GGG | - | chr8.4:37456689-37456708 | None:intergenic | 30.0% |
| !! | AAACATCTTATGCTTTTTGC+AGG | + | chr8.4:37456122-37456141 | MS.gene71002:intron | 30.0% |
| !! | TCTATTTTCTCAAGTATTGC+TGG | + | chr8.4:37456044-37456063 | MS.gene71002:intron | 30.0% |
| !! | TGCTCATCATTGTTATTTCA+CGG | + | chr8.4:37454197-37454216 | MS.gene71002:intron | 30.0% |
| !! | TGTAAGGTTTTCTTTGACTT+GGG | + | chr8.4:37454285-37454304 | MS.gene71002:intron | 30.0% |
| !! | TTTGTGTGTTTTTGTTGAAG+GGG | + | chr8.4:37453413-37453432 | MS.gene71002:intron | 30.0% |
| !!! | CAATGTTTTTAGACGATTCA+TGG | + | chr8.4:37454352-37454371 | MS.gene71002:intron | 30.0% |
| !!! | TGTTCCTGCTTTTTCTAAAT+GGG | + | chr8.4:37453269-37453288 | MS.gene71002:CDS | 30.0% |
| AAAAGCCCTTGAAATCTGTA+AGG | + | chr8.4:37456193-37456212 | MS.gene71002:CDS | 35.0% | |
| AAAATGAAAGGGGAATACCA+CGG | - | chr8.4:37454314-37454333 | None:intergenic | 35.0% | |
| AAGCAGGAAGAAAGTTTCTT+TGG | + | chr8.4:37456249-37456268 | MS.gene71002:CDS | 35.0% | |
| AAGTTCATTACTGTCTGAGA+TGG | + | chr8.4:37454405-37454424 | MS.gene71002:intron | 35.0% | |
| AATATATCACCAAGAGGGAA+AGG | - | chr8.4:37455292-37455311 | None:intergenic | 35.0% | |
| AATGCGATACATCTTCATCA+AGG | - | chr8.4:37454949-37454968 | None:intergenic | 35.0% | |
| AATGTGGAAACTGTGTTTGA+TGG | + | chr8.4:37453474-37453493 | MS.gene71002:CDS | 35.0% | |
| ACATCTTCATCAAGGTCATA+GGG | - | chr8.4:37454941-37454960 | None:intergenic | 35.0% | |
| ACCAAAACTGGTATGGAATA+TGG | + | chr8.4:37453312-37453331 | MS.gene71002:intron | 35.0% | |
| ATCTTTCGACATGAAAGGAT+AGG | - | chr8.4:37456505-37456524 | None:intergenic | 35.0% | |
| ATTAAACAGGAGGAAAACGA+CGG | - | chr8.4:37454438-37454457 | None:intergenic | 35.0% | |
| CAAACCCATTTAGAAAAAGC+AGG | - | chr8.4:37453276-37453295 | None:intergenic | 35.0% | |
| CTCATTCTTCATCTTCTCTT+TGG | + | chr8.4:37453082-37453101 | MS.gene71002:CDS | 35.0% | |
| CTTATTTCCATAAGCTCTCT+AGG | - | chr8.4:37454783-37454802 | None:intergenic | 35.0% | |
| GAAAGTTTCTTTGGATCTCT+TGG | + | chr8.4:37456258-37456277 | MS.gene71002:CDS | 35.0% | |
| GAATGAAGTATACACATGCA+AGG | - | chr8.4:37455049-37455068 | None:intergenic | 35.0% | |
| GAATTAAGCCAATGATCACA+AGG | - | chr8.4:37453642-37453661 | None:intergenic | 35.0% | |
| GACTTTGATGTGGTTTATGT+TGG | + | chr8.4:37455529-37455548 | MS.gene71002:CDS | 35.0% | |
| GATATGCACAATCATCAAAG+TGG | - | chr8.4:37455615-37455634 | None:intergenic | 35.0% | |
| GATATTCTGGACATGTTGAT+GGG | + | chr8.4:37455140-37455159 | MS.gene71002:CDS | 35.0% | |
| GATGATTGTGCATATCGATA+TGG | + | chr8.4:37455619-37455638 | MS.gene71002:CDS | 35.0% | |
| GTGATGAAGAGATTCTGTAA+AGG | - | chr8.4:37453581-37453600 | None:intergenic | 35.0% | |
| TACATCTTCATCAAGGTCAT+AGG | - | chr8.4:37454942-37454961 | None:intergenic | 35.0% | |
| TATGCAGTTTGAGAAACAGA+AGG | - | chr8.4:37456171-37456190 | None:intergenic | 35.0% | |
| TATTCTGATGGAATCAATGG+AGG | - | chr8.4:37456219-37456238 | None:intergenic | 35.0% | |
| TCAATGATGAAGTTTGAGAG+TGG | + | chr8.4:37453447-37453466 | MS.gene71002:CDS | 35.0% | |
| TGGTTTCTTTGGTTATATGC+TGG | + | chr8.4:37455791-37455810 | MS.gene71002:CDS | 35.0% | |
| TGTTGCAGATACTGCAAATA+TGG | + | chr8.4:37455228-37455247 | MS.gene71002:CDS | 35.0% | |
| TTTGGAGATTAGATGCTTGA+TGG | + | chr8.4:37453729-37453748 | MS.gene71002:intron | 35.0% | |
| ! | AAAGTAAAGCATTCTACAGC+GGG | + | chr8.4:37456550-37456569 | MS.gene71002:CDS | 35.0% |
| ! | AACCAATGAGGTAGTTTTTG+GGG | + | chr8.4:37456719-37456738 | MS.gene71002:CDS | 35.0% |
| ! | ACAACCAATGAGGTAGTTTT+TGG | + | chr8.4:37456717-37456736 | MS.gene71002:CDS | 35.0% |
| ! | ATGAAAGGATAGGTTTTTCG+AGG | - | chr8.4:37456495-37456514 | None:intergenic | 35.0% |
| ! | CAAAGTAAAGCATTCTACAG+CGG | + | chr8.4:37456549-37456568 | MS.gene71002:CDS | 35.0% |
| ! | CAACCAATGAGGTAGTTTTT+GGG | + | chr8.4:37456718-37456737 | MS.gene71002:CDS | 35.0% |
| ! | CTGTTGAGGTTTTGCATAAT+GGG | + | chr8.4:37453523-37453542 | MS.gene71002:CDS | 35.0% |
| ! | CTTTGCTCATAAAAAGTGTG+AGG | - | chr8.4:37456690-37456709 | None:intergenic | 35.0% |
| ! | GTTGTGTATAATTGGTGGTT+GGG | + | chr8.4:37453757-37453776 | MS.gene71002:intron | 35.0% |
| ! | TCCATATTCCATACCAGTTT+TGG | - | chr8.4:37453316-37453335 | None:intergenic | 35.0% |
| ! | TGTTGAGGTTTTGCATAATG+GGG | + | chr8.4:37453524-37453543 | MS.gene71002:CDS | 35.0% |
| ! | TGTTGTGTATAATTGGTGGT+TGG | + | chr8.4:37453756-37453775 | MS.gene71002:intron | 35.0% |
| !! | AAACTTTCTTCCTGCTTTTC+GGG | - | chr8.4:37456246-37456265 | None:intergenic | 35.0% |
| !! | ATATTCCATACCAGTTTTGG+TGG | - | chr8.4:37453313-37453332 | None:intergenic | 35.0% |
| !! | GAAACTTTCTTCCTGCTTTT+CGG | - | chr8.4:37456247-37456266 | None:intergenic | 35.0% |
| !! | TGAAAGGATAGGTTTTTCGA+GGG | - | chr8.4:37456494-37456513 | None:intergenic | 35.0% |
| !! | TGCATTTTGATATGTGTCAG+CGG | + | chr8.4:37454981-37455000 | MS.gene71002:intron | 35.0% |
| !!! | AGTTTTGGTGGTAGCTTTAA+GGG | - | chr8.4:37453301-37453320 | None:intergenic | 35.0% |
| !!! | CTGCTTTTTCTAAATGGGTT+TGG | + | chr8.4:37453274-37453293 | MS.gene71002:CDS | 35.0% |
| !!! | CTGTTCCTGCTTTTTCTAAA+TGG | + | chr8.4:37453268-37453287 | MS.gene71002:CDS | 35.0% |
| !!! | TTTTCGGGTTCATATTCTGA+TGG | - | chr8.4:37456231-37456250 | None:intergenic | 35.0% |
| AACCTATCCTAGAGAGCTTA+TGG | + | chr8.4:37454773-37454792 | MS.gene71002:intron | 40.0% | |
| AAGCAATGAGACAACCAATG+AGG | + | chr8.4:37456707-37456726 | MS.gene71002:CDS | 40.0% | |
| AATGAGCCTCCATATTCAAC+AGG | - | chr8.4:37456789-37456808 | None:intergenic | 40.0% | |
| AATGCATAGAGGAGTAGAAC+TGG | - | chr8.4:37454510-37454529 | None:intergenic | 40.0% | |
| ACATCAGAAGGAAGAAGACA+AGG | - | chr8.4:37455873-37455892 | None:intergenic | 40.0% | |
| AGAAAAAGCAGGAACAGCAT+TGG | - | chr8.4:37453265-37453284 | None:intergenic | 40.0% | |
| AGAATATGAACCCGAAAAGC+AGG | + | chr8.4:37456233-37456252 | MS.gene71002:CDS | 40.0% | |
| AGAGCTACCACCAATTTCAA+AGG | + | chr8.4:37456358-37456377 | MS.gene71002:CDS | 40.0% | |
| ATCACACCTGTTGAATATGG+AGG | + | chr8.4:37456780-37456799 | MS.gene71002:CDS | 40.0% | |
| ATGCATAGAGGAGTAGAACT+GGG | - | chr8.4:37454509-37454528 | None:intergenic | 40.0% | |
| CAACAATTGCTGGAGGAAAA+TGG | + | chr8.4:37455452-37455471 | MS.gene71002:CDS | 40.0% | |
| CACAATCATCAAAGTGGAGT+TGG | - | chr8.4:37455609-37455628 | None:intergenic | 40.0% | |
| CAGGAATTGCAATGCTTGTT+GGG | + | chr8.4:37455766-37455785 | MS.gene71002:intron | 40.0% | |
| CGGTACAATTGTAGAATCTC+AGG | + | chr8.4:37455833-37455852 | MS.gene71002:CDS | 40.0% | |
| CTCAGAAGCAAGTGAATGAT+TGG | + | chr8.4:37456400-37456419 | MS.gene71002:CDS | 40.0% | |
| CTCATGATTATGACCCTGTT+TGG | + | chr8.4:37454609-37454628 | MS.gene71002:intron | 40.0% | |
| CTTAAAGCTACCACCAAAAC+TGG | + | chr8.4:37453300-37453319 | MS.gene71002:CDS | 40.0% | |
| GATTTATTTCCTTCGTTCGC+AGG | + | chr8.4:37455747-37455766 | MS.gene71002:intron | 40.0% | |
| GGATATTCTGGACATGTTGA+TGG | + | chr8.4:37455139-37455158 | MS.gene71002:CDS | 40.0% | |
| GTCATCACACCTGTTGAATA+TGG | + | chr8.4:37456777-37456796 | MS.gene71002:CDS | 40.0% | |
| GTCGTAGTCAATTAAACAGG+AGG | - | chr8.4:37454448-37454467 | None:intergenic | 40.0% | |
| GTGTTTGATGGAAGTAAGCT+TGG | + | chr8.4:37453486-37453505 | MS.gene71002:CDS | 40.0% | |
| GTTTGAGAGTGGTTACAATG+TGG | + | chr8.4:37453458-37453477 | MS.gene71002:CDS | 40.0% | |
| TCATCAACAGTTATCCCCTT+TGG | - | chr8.4:37455193-37455212 | None:intergenic | 40.0% | |
| TCTGCATCTTTCGACATGAA+AGG | - | chr8.4:37456510-37456529 | None:intergenic | 40.0% | |
| TGCAAAACCTCAACAGCATA+AGG | - | chr8.4:37453519-37453538 | None:intergenic | 40.0% | |
| TGTCAAACACCGATAGATGT+CGG | - | chr8.4:37455999-37456018 | None:intergenic | 40.0% | |
| TTTCTTCATCCTTTCCCTCT+TGG | + | chr8.4:37455280-37455299 | MS.gene71002:intron | 40.0% | |
| ! | AATTGAGCCTTATGCTGTTG+AGG | + | chr8.4:37453509-37453528 | MS.gene71002:CDS | 40.0% |
| ! | AGGAATTGCAATGCTTGTTG+GGG | + | chr8.4:37455767-37455786 | MS.gene71002:intron | 40.0% |
| ! | GCTGTTGAGGTTTTGCATAA+TGG | + | chr8.4:37453522-37453541 | MS.gene71002:CDS | 40.0% |
| ! | TCGTCAATGGTGGAGATAAT+GGG | + | chr8.4:37456303-37456322 | MS.gene71002:CDS | 40.0% |
| ! | TGTACGAACATCGCGATTTT+CGG | + | chr8.4:37456808-37456827 | MS.gene71002:CDS | 40.0% |
| ! | TGTGGTCTTCTTCTGAAAAC+AGG | - | chr8.4:37456339-37456358 | None:intergenic | 40.0% |
| ! | TGTTGTTGTTGATGTGGTTG+CGG | - | chr8.4:37456609-37456628 | None:intergenic | 40.0% |
| ! | TTCTCAAGTATTGCTGGTGT+TGG | + | chr8.4:37456050-37456069 | MS.gene71002:intron | 40.0% |
| !! | ACAGAAGGCATTACTGTTAG+TGG | - | chr8.4:37456156-37456175 | None:intergenic | 40.0% |
| !! | ACTTTGATAAGCACTGACAC+AGG | - | chr8.4:37456098-37456117 | None:intergenic | 40.0% |
| !! | ATTTTGATATGTGTCAGCGG+GGG | + | chr8.4:37454984-37455003 | MS.gene71002:intron | 40.0% |
| !! | CAGTTTTGGTGGTAGCTTTA+AGG | - | chr8.4:37453302-37453321 | None:intergenic | 40.0% |
| !! | CATTTTGATATGTGTCAGCG+GGG | + | chr8.4:37454983-37455002 | MS.gene71002:intron | 40.0% |
| !! | GCATTTTGATATGTGTCAGC+GGG | + | chr8.4:37454982-37455001 | MS.gene71002:intron | 40.0% |
| !! | GTTTTTAGACGATTCATGGC+TGG | + | chr8.4:37454356-37454375 | MS.gene71002:intron | 40.0% |
| !! | TCACTTGCTTCTGAGATTGT+TGG | - | chr8.4:37456395-37456414 | None:intergenic | 40.0% |
| !! | TCAGTGCTTGCCTTTGAAAT+TGG | - | chr8.4:37456371-37456390 | None:intergenic | 40.0% |
| !! | TTCCATAAGCTCTCTAGGAT+AGG | - | chr8.4:37454778-37454797 | None:intergenic | 40.0% |
| !!! | AATGCCGATGAGCTAGTTTT+GGG | + | chr8.4:37453800-37453819 | MS.gene71002:intron | 40.0% |
| !!! | GAAAGGATAGGTTTTTCGAG+GGG | - | chr8.4:37456493-37456512 | None:intergenic | 40.0% |
| !!! | GGGATGCTTTTTTCCGAATT+TGG | + | chr8.4:37453777-37453796 | MS.gene71002:intron | 40.0% |
| !!! | TGTTTTTGTTGTTGCTGCTG+CGG | - | chr8.4:37456636-37456655 | None:intergenic | 40.0% |
| AACCACCATCTATCGACACA+AGG | + | chr8.4:37456460-37456479 | MS.gene71002:CDS | 45.0% | |
| ACAGAGGAAACCAAGCCATT+AGG | + | chr8.4:37455578-37455597 | MS.gene71002:CDS | 45.0% | |
| ACCACCATCTATCGACACAA+GGG | + | chr8.4:37456461-37456480 | MS.gene71002:CDS | 45.0% | |
| AGCTACCACCAAAACTGGTA+TGG | + | chr8.4:37453305-37453324 | MS.gene71002:intron | 45.0% | |
| ATCACGAAACTTTCCTGTGC+TGG | - | chr8.4:37456426-37456445 | None:intergenic | 45.0% | |
| ATTGCAATTCCTGCGAACGA+AGG | - | chr8.4:37455759-37455778 | None:intergenic | 45.0% | |
| CAACAGTTATCCCCTTTGGA+TGG | - | chr8.4:37455189-37455208 | None:intergenic | 45.0% | |
| CACACCCAAAACTAGCTCAT+CGG | - | chr8.4:37453807-37453826 | None:intergenic | 45.0% | |
| CAGAGGAAACCAAGCCATTA+GGG | + | chr8.4:37455579-37455598 | MS.gene71002:CDS | 45.0% | |
| CGGTCTCGAATGAGTTACAT+GGG | + | chr8.4:37456828-37456847 | MS.gene71002:CDS | 45.0% | |
| CTAGGATGAACCATCCAAAG+GGG | + | chr8.4:37455176-37455195 | MS.gene71002:CDS | 45.0% | |
| CTTCAAATTGAAGACGTGCC+CGG | + | chr8.4:37455970-37455989 | MS.gene71002:intron | 45.0% | |
| GCAGGAATTGCAATGCTTGT+TGG | + | chr8.4:37455765-37455784 | MS.gene71002:intron | 45.0% | |
| GCTAGGATGAACCATCCAAA+GGG | + | chr8.4:37455175-37455194 | MS.gene71002:CDS | 45.0% | |
| GCTCATCGGCATTCCAAATT+CGG | - | chr8.4:37453793-37453812 | None:intergenic | 45.0% | |
| GGAGGCCTTACAGATTTCAA+GGG | - | chr8.4:37456201-37456220 | None:intergenic | 45.0% | |
| GGAGTAGAACTGGGAAAAAG+TGG | - | chr8.4:37454500-37454519 | None:intergenic | 45.0% | |
| GGATCAGCTGAAGGATATTC+TGG | + | chr8.4:37455127-37455146 | MS.gene71002:CDS | 45.0% | |
| GTACTTACTTGCAGGTGAAG+TGG | - | chr8.4:37453143-37453162 | None:intergenic | 45.0% | |
| TATGGCAGTGATTTCCCTCT+TGG | + | chr8.4:37455637-37455656 | MS.gene71002:CDS | 45.0% | |
| TCCTCTGTCTACAACAAGCA+GGG | - | chr8.4:37455566-37455585 | None:intergenic | 45.0% | |
| TCGGTCTCGAATGAGTTACA+TGG | + | chr8.4:37456827-37456846 | MS.gene71002:CDS | 45.0% | |
| TGCCCCAAAAACTACCTCAT+TGG | - | chr8.4:37456724-37456743 | None:intergenic | 45.0% | |
| TGGAGGCCTTACAGATTTCA+AGG | - | chr8.4:37456202-37456221 | None:intergenic | 45.0% | |
| TTCCTCTGTCTACAACAAGC+AGG | - | chr8.4:37455567-37455586 | None:intergenic | 45.0% | |
| ! | ATTCTGGACATGTTGATGGG+AGG | + | chr8.4:37455143-37455162 | MS.gene71002:CDS | 45.0% |
| ! | CTCGTCAATGGTGGAGATAA+TGG | + | chr8.4:37456302-37456321 | MS.gene71002:CDS | 45.0% |
| ! | GTTGGTGAGTACTTACTTGC+AGG | - | chr8.4:37453151-37453170 | None:intergenic | 45.0% |
| ! | TAAAGCATTCTACAGCGGGT+GGG | + | chr8.4:37456554-37456573 | MS.gene71002:CDS | 45.0% |
| ! | TGAAATTGGTGGTAGCTCTG+TGG | - | chr8.4:37456357-37456376 | None:intergenic | 45.0% |
| ! | TTTTGATATGTGTCAGCGGG+GGG | + | chr8.4:37454985-37455004 | MS.gene71002:intron | 45.0% |
| !! | CTTATGCTTTTTGCAGGCTC+AGG | + | chr8.4:37456128-37456147 | MS.gene71002:intron | 45.0% |
| !! | GAATGCCGATGAGCTAGTTT+TGG | + | chr8.4:37453799-37453818 | MS.gene71002:intron | 45.0% |
| !! | GTGCTTGCCTTTGAAATTGG+TGG | - | chr8.4:37456368-37456387 | None:intergenic | 45.0% |
| !! | TCAATGGTGGAGATAATGGG+AGG | + | chr8.4:37456306-37456325 | MS.gene71002:CDS | 45.0% |
| AACAGGAGGAAAACGACGGT+AGG | - | chr8.4:37454434-37454453 | None:intergenic | 50.0% | |
| CTTCACTTGGTCCATCAACG+TGG | - | chr8.4:37455492-37455511 | None:intergenic | 50.0% | |
| CTTGCAGGTGAAGTGGTTGA+TGG | - | chr8.4:37453136-37453155 | None:intergenic | 50.0% | |
| GGCTAGGATGAACCATCCAA+AGG | + | chr8.4:37455174-37455193 | MS.gene71002:CDS | 50.0% | |
| GGTAAGCTTCTTGCGAATGC+TGG | + | chr8.4:37456279-37456298 | MS.gene71002:CDS | 50.0% | |
| GTGGAGTTGGATCTCCCTAA+TGG | - | chr8.4:37455596-37455615 | None:intergenic | 50.0% | |
| GTTGGATCTCCCTAATGGCT+TGG | - | chr8.4:37455591-37455610 | None:intergenic | 50.0% | |
| TCAGGGGTCACAACAATTGC+TGG | + | chr8.4:37455442-37455461 | MS.gene71002:intron | 50.0% | |
| TCGCCATCAGTACCAATCGT+CGG | + | chr8.4:37456662-37456681 | MS.gene71002:CDS | 50.0% | |
| ! | ACATGTTGATGGGAGGCTCA+GGG | + | chr8.4:37455150-37455169 | MS.gene71002:CDS | 50.0% |
| ! | AGACGATTCATGGCTGGTCA+TGG | + | chr8.4:37454362-37454381 | MS.gene71002:intron | 50.0% |
| ! | AGTGAATGATTGGCCAGCAC+AGG | + | chr8.4:37456410-37456429 | MS.gene71002:CDS | 50.0% |
| ! | ATTGCAATGCTTGTTGGGGC+TGG | + | chr8.4:37455771-37455790 | MS.gene71002:CDS | 50.0% |
| ! | GGCTGCTGTTGTTGTTGATG+TGG | - | chr8.4:37456615-37456634 | None:intergenic | 50.0% |
| ! | GTAAAGCATTCTACAGCGGG+TGG | + | chr8.4:37456553-37456572 | MS.gene71002:CDS | 50.0% |
| !! | ATAAGCACTGACACAGGCAC+CGG | - | chr8.4:37456092-37456111 | None:intergenic | 50.0% |
| !! | CTTGTTGGGGCTGGTTTCTT+TGG | + | chr8.4:37455780-37455799 | MS.gene71002:CDS | 50.0% |
| !! | GGGATAACTGTTGATGACCG+AGG | + | chr8.4:37455196-37455215 | MS.gene71002:CDS | 50.0% |
| !! | TCCCTGCTTGTTGTAGACAG+AGG | + | chr8.4:37455562-37455581 | MS.gene71002:CDS | 50.0% |
| !!! | AGCTAGTTTTGGGTGTGGTG+TGG | + | chr8.4:37453810-37453829 | MS.gene71002:intron | 50.0% |
| !!! | CGATGAGCTAGTTTTGGGTG+TGG | + | chr8.4:37453805-37453824 | MS.gene71002:intron | 50.0% |
| !!! | GGATAGGTTTTTCGAGGGGT+TGG | - | chr8.4:37456489-37456508 | None:intergenic | 50.0% |
| AAGTGTGAGGGACCGACGAT+TGG | - | chr8.4:37456677-37456696 | None:intergenic | 55.0% | |
| ACCGATAGATGTCGGACACC+GGG | - | chr8.4:37455991-37456010 | None:intergenic | 55.0% | |
| AGGAAAATGGAGCCGTGGAG+GGG | + | chr8.4:37455465-37455484 | MS.gene71002:CDS | 55.0% | |
| CACCGATAGATGTCGGACAC+CGG | - | chr8.4:37455992-37456011 | None:intergenic | 55.0% | |
| CTGGTAGCTGGATCAGCTGA+AGG | + | chr8.4:37455118-37455137 | MS.gene71002:CDS | 55.0% | |
| GAGGAAAATGGAGCCGTGGA+GGG | + | chr8.4:37455464-37455483 | MS.gene71002:CDS | 55.0% | |
| GCTGATCCAGCTACCAGCTT+CGG | - | chr8.4:37455115-37455134 | None:intergenic | 55.0% | |
| GGAGGGGAAGAAGGAATCTG+TGG | + | chr8.4:37456755-37456774 | MS.gene71002:CDS | 55.0% | |
| GGGGTCACAACAATTGCTGG+AGG | + | chr8.4:37455445-37455464 | MS.gene71002:intron | 55.0% | |
| TGCAGATAGCAGACCGAAGC+TGG | + | chr8.4:37455099-37455118 | MS.gene71002:intron | 55.0% | |
| ! | GACATGTTGATGGGAGGCTC+AGG | + | chr8.4:37455149-37455168 | MS.gene71002:CDS | 55.0% |
| ! | GCCCTTGTGTCGATAGATGG+TGG | - | chr8.4:37456465-37456484 | None:intergenic | 55.0% |
| ! | GGACCGACGATTGGTACTGA+TGG | - | chr8.4:37456668-37456687 | None:intergenic | 55.0% |
| ! | GGTGCCCTTGTGTCGATAGA+TGG | - | chr8.4:37456468-37456487 | None:intergenic | 55.0% |
| !! | GAATGCTGGCTCGTCAATGG+TGG | + | chr8.4:37456293-37456312 | MS.gene71002:CDS | 55.0% |
| !! | TAAGCACTGACACAGGCACC+GGG | - | chr8.4:37456091-37456110 | None:intergenic | 55.0% |
| !! | TGCGAATGCTGGCTCGTCAA+TGG | + | chr8.4:37456290-37456309 | MS.gene71002:CDS | 55.0% |
| !! | TTCTTTGACTTGGGTCGCCG+TGG | + | chr8.4:37454294-37454313 | MS.gene71002:intron | 55.0% |
| !!! | GGTAGTTTTTGGGGCAGTGC+AGG | + | chr8.4:37456728-37456747 | MS.gene71002:CDS | 55.0% |
| !!! | TTTTGGGGCAGTGCAGGAAC+AGG | + | chr8.4:37456734-37456753 | MS.gene71002:CDS | 55.0% |
| AGCAGACCGAAGCTGGTAGC+TGG | + | chr8.4:37455106-37455125 | MS.gene71002:CDS | 60.0% | |
| GCAGGAACAGGAGGGGAAGA+AGG | + | chr8.4:37456746-37456765 | MS.gene71002:CDS | 60.0% | |
| GCATTCTACAGCGGGTGGGA+TGG | + | chr8.4:37456558-37456577 | MS.gene71002:CDS | 60.0% | |
| GCATTGCTGCAGCGTAGGCT+CGG | + | chr8.4:37455813-37455832 | MS.gene71002:CDS | 60.0% | |
| GCCCGGTGTCCGACATCTAT+CGG | + | chr8.4:37455987-37456006 | MS.gene71002:intron | 60.0% | |
| GCTGGAGGAAAATGGAGCCG+TGG | + | chr8.4:37455460-37455479 | MS.gene71002:CDS | 60.0% | |
| GGAAAATGGAGCCGTGGAGG+GGG | + | chr8.4:37455466-37455485 | MS.gene71002:CDS | 60.0% | |
| GGAGGAAAATGGAGCCGTGG+AGG | + | chr8.4:37455463-37455482 | MS.gene71002:CDS | 60.0% | |
| TGCTGGCATTGCTGCAGCGT+AGG | + | chr8.4:37455808-37455827 | MS.gene71002:CDS | 60.0% | |
| TGGCGTGTCAGTGTCATGCC+CGG | + | chr8.4:37456070-37456089 | MS.gene71002:intron | 60.0% | |
| ! | GATGGTGGTTCGTCTTCGCG+AGG | - | chr8.4:37456450-37456469 | None:intergenic | 60.0% |
| ! | TGTTGATGGGAGGCTCAGGG+AGG | + | chr8.4:37455153-37455172 | MS.gene71002:CDS | 60.0% |
| ATGGGAGGCTCAGGGAGGCT+AGG | + | chr8.4:37455158-37455177 | MS.gene71002:CDS | 65.0% | |
| CATCAACGTGGCCCCCTCCA+CGG | - | chr8.4:37455480-37455499 | None:intergenic | 65.0% | |
| GGGCAGTGCAGGAACAGGAG+GGG | + | chr8.4:37456739-37456758 | MS.gene71002:CDS | 65.0% | |
| GGGGCAGTGCAGGAACAGGA+GGG | + | chr8.4:37456738-37456757 | MS.gene71002:CDS | 65.0% | |
| TGGGGCAGTGCAGGAACAGG+AGG | + | chr8.4:37456737-37456756 | MS.gene71002:CDS | 65.0% | |
| CGTGGAGGGGGCCACGTTGA+TGG | + | chr8.4:37455478-37455497 | MS.gene71002:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 37453055 | 37456863 | 37453055 | ID=MS.gene71002 |
| chr8.4 | mRNA | 37453055 | 37456863 | 37453055 | ID=MS.gene71002.t1;Parent=MS.gene71002 |
| chr8.4 | exon | 37453055 | 37453154 | 37453055 | ID=MS.gene71002.t1.exon1;Parent=MS.gene71002.t1 |
| chr8.4 | CDS | 37453055 | 37453154 | 37453055 | ID=cds.MS.gene71002.t1;Parent=MS.gene71002.t1 |
| chr8.4 | exon | 37453241 | 37453321 | 37453241 | ID=MS.gene71002.t1.exon2;Parent=MS.gene71002.t1 |
| chr8.4 | CDS | 37453241 | 37453321 | 37453241 | ID=cds.MS.gene71002.t1;Parent=MS.gene71002.t1 |
| chr8.4 | exon | 37453433 | 37453609 | 37453433 | ID=MS.gene71002.t1.exon3;Parent=MS.gene71002.t1 |
| chr8.4 | CDS | 37453433 | 37453609 | 37453433 | ID=cds.MS.gene71002.t1;Parent=MS.gene71002.t1 |
| chr8.4 | exon | 37455104 | 37455274 | 37455104 | ID=MS.gene71002.t1.exon4;Parent=MS.gene71002.t1 |
| chr8.4 | CDS | 37455104 | 37455274 | 37455104 | ID=cds.MS.gene71002.t1;Parent=MS.gene71002.t1 |
| chr8.4 | exon | 37455446 | 37455658 | 37455446 | ID=MS.gene71002.t1.exon5;Parent=MS.gene71002.t1 |
| chr8.4 | CDS | 37455446 | 37455658 | 37455446 | ID=cds.MS.gene71002.t1;Parent=MS.gene71002.t1 |
| chr8.4 | exon | 37455769 | 37455857 | 37455769 | ID=MS.gene71002.t1.exon6;Parent=MS.gene71002.t1 |
| chr8.4 | CDS | 37455769 | 37455857 | 37455769 | ID=cds.MS.gene71002.t1;Parent=MS.gene71002.t1 |
| chr8.4 | exon | 37456144 | 37456863 | 37456144 | ID=MS.gene71002.t1.exon7;Parent=MS.gene71002.t1 |
| chr8.4 | CDS | 37456144 | 37456863 | 37456144 | ID=cds.MS.gene71002.t1;Parent=MS.gene71002.t1 |
| Gene Sequence |
| Protein sequence |
