Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027656.t1 | XP_003613201.1 | 97.4 | 302 | 8 | 0 | 1 | 302 | 27 | 328 | 5.40E-171 | 610.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027656.t1 | G7K078 | 97.4 | 302 | 8 | 0 | 1 | 302 | 27 | 328 | 3.9e-171 | 610.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027656 | MS.gene70636 | PPI |
| MS.gene027656 | MS.gene29367 | PPI |
| MS.gene027656 | MS.gene022308 | PPI |
| MS.gene027656 | MS.gene25973 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027656.t1 | MTR_5g033940 | 97.351 | 302 | 8 | 0 | 1 | 302 | 27 | 328 | 0.0 | 607 |
| MS.gene027656.t1 | MTR_8g069820 | 63.072 | 306 | 107 | 2 | 1 | 302 | 42 | 345 | 2.43e-137 | 392 |
| MS.gene027656.t1 | MTR_8g069805 | 60.912 | 307 | 112 | 3 | 1 | 302 | 57 | 360 | 2.84e-132 | 380 |
| MS.gene027656.t1 | MTR_4g105600 | 50.814 | 307 | 142 | 4 | 4 | 302 | 45 | 350 | 2.20e-105 | 311 |
| MS.gene027656.t1 | MTR_3g077630 | 51.768 | 311 | 133 | 4 | 5 | 302 | 46 | 352 | 1.65e-100 | 299 |
| MS.gene027656.t1 | MTR_7g035095 | 49.498 | 299 | 139 | 5 | 1 | 299 | 31 | 317 | 1.55e-96 | 287 |
| MS.gene027656.t1 | MTR_1g086330 | 44.643 | 280 | 145 | 4 | 15 | 294 | 52 | 321 | 6.90e-74 | 230 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027656.t1 | AT1G70505 | 58.586 | 297 | 117 | 4 | 3 | 295 | 29 | 323 | 4.94e-119 | 345 |
| MS.gene027656.t1 | AT1G70505 | 58.586 | 297 | 117 | 4 | 3 | 295 | 55 | 349 | 5.88e-119 | 346 |
| MS.gene027656.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene027656.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene027656.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene027656.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene027656.t1 | AT5G62960 | 48.026 | 304 | 145 | 3 | 3 | 302 | 53 | 347 | 9.99e-100 | 296 |
| MS.gene027656.t1 | AT5G62960 | 46.617 | 266 | 129 | 3 | 3 | 264 | 53 | 309 | 2.69e-83 | 253 |
| MS.gene027656.t1 | AT3G27770 | 41.869 | 289 | 146 | 7 | 7 | 287 | 37 | 311 | 1.92e-73 | 228 |
| MS.gene027656.t1 | AT3G27770 | 43.678 | 261 | 130 | 6 | 39 | 291 | 21 | 272 | 5.89e-70 | 218 |
| MS.gene027656.t1 | AT1G70505 | 52.055 | 219 | 99 | 4 | 3 | 217 | 29 | 245 | 9.89e-69 | 214 |
| MS.gene027656.t1 | AT1G70505 | 52.036 | 221 | 100 | 4 | 3 | 219 | 55 | 273 | 1.47e-67 | 215 |
| MS.gene027656.t1 | AT2G47115 | 39.863 | 291 | 144 | 4 | 17 | 297 | 28 | 297 | 3.02e-59 | 191 |
Find 61 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATTCAAATATTATTTC+AGG | 0.227394 | 5.2:-23941390 | MS.gene027656:intron |
| TTAAAGGAATTCATCCTAAT+TGG | 0.227419 | 5.2:-23942393 | MS.gene027656:CDS |
| TGCTCACTGACCTTGTATTC+TGG | 0.268288 | 5.2:-23939754 | MS.gene027656:CDS |
| AATATCCAGACGGAAGTCTT+TGG | 0.329675 | 5.2:+23939706 | None:intergenic |
| GCATGGAATACATGTGTTAA+AGG | 0.347362 | 5.2:-23942409 | MS.gene027656:CDS |
| ATAATGCACATTCCATGTTA+TGG | 0.360858 | 5.2:-23938033 | MS.gene027656:CDS |
| CTGTAAGCAAGCAACCAATT+AGG | 0.371298 | 5.2:+23942379 | None:intergenic |
| CATCACCATATGCACCCTTA+TGG | 0.375914 | 5.2:-23938541 | MS.gene027656:intron |
| GTTAAAGCAACTTCTATAGA+AGG | 0.385635 | 5.2:+23941565 | None:intergenic |
| TTAAATATGTAGACTTGTGC+AGG | 0.402756 | 5.2:-23939785 | MS.gene027656:intron |
| CTGGTTCTTGTCAGTTTCTA+CGG | 0.409172 | 5.2:-23937957 | MS.gene027656:CDS |
| TTTGGTCACTATTTACTTTG+CGG | 0.416580 | 5.2:-23941826 | MS.gene027656:intron |
| TCCATGCCGTTGTTTCGCTT+TGG | 0.416933 | 5.2:-23938671 | MS.gene027656:intron |
| TATGTGGCTCCAACTCTTGA+TGG | 0.421734 | 5.2:-23941497 | MS.gene027656:CDS |
| TAAGAGTTCGTATGCCAATC+AGG | 0.423869 | 5.2:-23941450 | MS.gene027656:CDS |
| GAACAGATGGACATTTACTT+TGG | 0.448713 | 5.2:-23941844 | MS.gene027656:intron |
| CTTTAACCACAAGGAATTTG+AGG | 0.453242 | 5.2:-23941549 | MS.gene027656:CDS |
| ACTGCTAATATAGTTGTTGA+TGG | 0.456333 | 5.2:-23942322 | MS.gene027656:CDS |
| ACATACCATAAGGGTGCATA+TGG | 0.457897 | 5.2:+23938536 | None:intergenic |
| GACAAATCAAGGAAAGGATA+AGG | 0.477562 | 5.2:+23938563 | None:intergenic |
| GTTAACGCTGTGCTCCTCCT+TGG | 0.480961 | 5.2:-23938871 | MS.gene027656:CDS |
| TGGTTGTCGAGATTGTTCTC+TGG | 0.487176 | 5.2:-23937976 | MS.gene027656:CDS |
| TTTAACCACAAGGAATTTGA+GGG | 0.490528 | 5.2:-23941548 | MS.gene027656:CDS |
| TCGATTGAGAGATTCCTGAT+TGG | 0.495840 | 5.2:+23941436 | None:intergenic |
| TCGAAATACAGCTGGTGTGT+GGG | 0.497509 | 5.2:-23941417 | MS.gene027656:CDS |
| GGAAGAAGGGCGACGAGAAA+CGG | 0.502040 | 5.2:-23942455 | MS.gene027656:CDS |
| AAGTCTTTGGATGTCATAAA+CGG | 0.506515 | 5.2:+23939719 | None:intergenic |
| CATATGGTGATGACAAATCA+AGG | 0.512911 | 5.2:+23938552 | None:intergenic |
| GACATCCAAAGACTTCCGTC+TGG | 0.516324 | 5.2:-23939711 | MS.gene027656:CDS |
| ATGTGGCTCCAACTCTTGAT+GGG | 0.523828 | 5.2:-23941496 | MS.gene027656:CDS |
| GAAATGAGAGGGTGGAAGAA+GGG | 0.524860 | 5.2:-23942468 | MS.gene027656:CDS |
| AAATAACAAGCCAGAATACA+AGG | 0.530867 | 5.2:+23939744 | None:intergenic |
| AGAAATGAGAGGGTGGAAGA+AGG | 0.535700 | 5.2:-23942469 | MS.gene027656:CDS |
| TTCAATTTGCAGTTCACCGT+TGG | 0.536989 | 5.2:-23938904 | MS.gene027656:intron |
| AAATATGCAAATCGAAACAC+TGG | 0.545569 | 5.2:+23938735 | None:intergenic |
| ATCGAAATACAGCTGGTGTG+TGG | 0.547035 | 5.2:-23941418 | MS.gene027656:CDS |
| TCTCTCAATCGAAATACAGC+TGG | 0.561952 | 5.2:-23941425 | MS.gene027656:CDS |
| GAAGGGCGACGAGAAACGGT+TGG | 0.569856 | 5.2:-23942451 | MS.gene027656:CDS |
| TCAGAAATCCCATCAAGAGT+TGG | 0.569985 | 5.2:+23941488 | None:intergenic |
| AATATAGTTGTTGATGGAGG+TGG | 0.572071 | 5.2:-23942316 | MS.gene027656:CDS |
| TGCTATATGAAGATGAAGCA+TGG | 0.572936 | 5.2:-23942426 | MS.gene027656:CDS |
| CGTTTCCCTCAAATTCCTTG+TGG | 0.579761 | 5.2:+23941543 | None:intergenic |
| AATTTAAGAACATACCATAA+GGG | 0.580153 | 5.2:+23938527 | None:intergenic |
| TACGAACTCTTAGATAAGAC+AGG | 0.588267 | 5.2:+23941461 | None:intergenic |
| CGAAATACAGCTGGTGTGTG+GGG | 0.596310 | 5.2:-23941416 | MS.gene027656:CDS |
| GGTGATGACAAATCAAGGAA+AGG | 0.602090 | 5.2:+23938557 | None:intergenic |
| TAGTGAAGTTGAAGCACTTG+TGG | 0.603098 | 5.2:-23937996 | MS.gene027656:CDS |
| TACAGAACGAGGCACTTATG+TGG | 0.604278 | 5.2:-23941513 | MS.gene027656:CDS |
| TCAGTAAATCAAGAAATGAG+AGG | 0.605968 | 5.2:-23942480 | MS.gene027656:CDS |
| CAGTAAATCAAGAAATGAGA+GGG | 0.619640 | 5.2:-23942479 | MS.gene027656:CDS |
| AATGCAAAGAAGCCATAACA+TGG | 0.621242 | 5.2:+23938021 | None:intergenic |
| TAGAAGTTGCTTTAACCACA+AGG | 0.639755 | 5.2:-23941558 | MS.gene027656:CDS |
| TAAATCAAGAAATGAGAGGG+TGG | 0.641595 | 5.2:-23942476 | MS.gene027656:CDS |
| ACCAAAGCGAAACAACGGCA+TGG | 0.646417 | 5.2:+23938670 | None:intergenic |
| CGAAACATCATTGAACTGCA+TGG | 0.659943 | 5.2:-23938848 | MS.gene027656:intron |
| AGTTCAATGATGTTTCGCCA+AGG | 0.672652 | 5.2:+23938854 | None:intergenic |
| TCAATGATGTTTCGCCAAGG+AGG | 0.685866 | 5.2:+23938857 | None:intergenic |
| GCTAATATAGTTGTTGATGG+AGG | 0.698631 | 5.2:-23942319 | MS.gene027656:CDS |
| GTTAACAGAGTGCATACCAA+CGG | 0.699109 | 5.2:+23938888 | None:intergenic |
| TTGTACTTACAATATCCAGA+CGG | 0.715608 | 5.2:+23939696 | None:intergenic |
| AACGCATTAGATACAGAACG+AGG | 0.781639 | 5.2:-23941524 | MS.gene027656:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATTCAAATATTATTTC+AGG | - | chr5.2:23939084-23939103 | MS.gene027656:intron | 10.0% |
| !!! | AAATTTAAAGTATATAATTG+AGG | + | chr5.2:23941686-23941705 | None:intergenic | 10.0% |
| !!! | TCTAATTTTATAAAAAAATG+TGG | + | chr5.2:23940035-23940054 | None:intergenic | 10.0% |
| !! | AAATATATGTCAAATATTAG+AGG | + | chr5.2:23942021-23942040 | None:intergenic | 15.0% |
| !! | TATATAATATAACACCTTAA+AGG | - | chr5.2:23939755-23939774 | MS.gene027656:CDS | 15.0% |
| !!! | AAGCATATTATTTTTAAATC+TGG | - | chr5.2:23940452-23940471 | MS.gene027656:intron | 15.0% |
| !!! | AATTGTTTTATTGATTGAAA+AGG | - | chr5.2:23939362-23939381 | MS.gene027656:intron | 15.0% |
| !!! | AATTTTATTGTGTTATTAAC+TGG | - | chr5.2:23940625-23940644 | MS.gene027656:intron | 15.0% |
| !!! | AATTTTCAATTAGAACTTAA+AGG | + | chr5.2:23939470-23939489 | None:intergenic | 15.0% |
| !!! | AGCATATTATTTTTAAATCT+GGG | - | chr5.2:23940453-23940472 | MS.gene027656:intron | 15.0% |
| !!! | ATTACTCTTATTGATTTTAT+TGG | - | chr5.2:23939110-23939129 | MS.gene027656:intron | 15.0% |
| !!! | ATTTCTTCTTTTCTTTAATT+TGG | + | chr5.2:23939345-23939364 | None:intergenic | 15.0% |
| !!! | TCATTTTTAAAAAATCTAAC+TGG | + | chr5.2:23942252-23942271 | None:intergenic | 15.0% |
| !!! | TTTCTTCTTTTCTTTAATTT+GGG | + | chr5.2:23939344-23939363 | None:intergenic | 15.0% |
| !! | AAATTGGATATAATTGAAGA+TGG | - | chr5.2:23939287-23939306 | MS.gene027656:intron | 20.0% |
| !! | AATAGTATTTGATCAAATCA+TGG | - | chr5.2:23940073-23940092 | MS.gene027656:intron | 20.0% |
| !! | ATGATATCAATTTCAAAATG+CGG | - | chr5.2:23938336-23938355 | MS.gene027656:intron | 20.0% |
| !! | CAGCATATTTATAACAAAAA+GGG | + | chr5.2:23938586-23938605 | None:intergenic | 20.0% |
| !! | CATTAATTACAAATTTCATG+CGG | + | chr5.2:23941391-23941410 | None:intergenic | 20.0% |
| !! | TAACCAATGAAATTGTTTAT+TGG | + | chr5.2:23938499-23938518 | None:intergenic | 20.0% |
| !! | TAGATTGGAGAAAAAAAAAT+GGG | - | chr5.2:23939635-23939654 | MS.gene027656:intron | 20.0% |
| !! | TATGTGCATACATTTAATTA+GGG | + | chr5.2:23940963-23940982 | None:intergenic | 20.0% |
| !! | TCAGCATATTTATAACAAAA+AGG | + | chr5.2:23938587-23938606 | None:intergenic | 20.0% |
| !!! | AATTTCTTTTTTTGTGCTTT+TGG | - | chr5.2:23938121-23938140 | MS.gene027656:intron | 20.0% |
| !!! | ATTAGTTTTGTGAAAGAAAT+TGG | - | chr5.2:23939271-23939290 | MS.gene027656:intron | 20.0% |
| !!! | ATTTCTTTTTTTGTGCTTTT+GGG | - | chr5.2:23938122-23938141 | MS.gene027656:intron | 20.0% |
| !!! | TATATTATCTATTGCTGATT+CGG | - | chr5.2:23942182-23942201 | MS.gene027656:intron | 20.0% |
| !!! | TCATTAACTTTTCATCATTA+AGG | + | chr5.2:23941434-23941453 | None:intergenic | 20.0% |
| !!! | TGATTTTGTGAAATTGATTA+TGG | - | chr5.2:23941048-23941067 | MS.gene027656:intron | 20.0% |
| !!! | TTCAAGTATAACTTTTGTTT+AGG | - | chr5.2:23939215-23939234 | MS.gene027656:intron | 20.0% |
| ! | AAAAAGAAATTCAACAAAGC+TGG | + | chr5.2:23939963-23939982 | None:intergenic | 25.0% |
| ! | AAAAGCAATAGAAAGAAGAT+GGG | + | chr5.2:23941842-23941861 | None:intergenic | 25.0% |
| ! | AAACATACATGAAAACTGTT+TGG | - | chr5.2:23941280-23941299 | MS.gene027656:intron | 25.0% |
| ! | AAAGGAGATATGTTATAGAA+AGG | - | chr5.2:23939380-23939399 | MS.gene027656:intron | 25.0% |
| ! | AAGACAGCAATATATTATAC+AGG | + | chr5.2:23938225-23938244 | None:intergenic | 25.0% |
| ! | AATTACTTGTATACTCTCAT+TGG | - | chr5.2:23939930-23939949 | MS.gene027656:intron | 25.0% |
| ! | AGATATCGGAAGAAAAAAAA+TGG | + | chr5.2:23940263-23940282 | None:intergenic | 25.0% |
| ! | CATACATTTAATTAGGGATT+AGG | + | chr5.2:23940957-23940976 | None:intergenic | 25.0% |
| ! | CGCATGAAATTTGTAATTAA+TGG | - | chr5.2:23941389-23941408 | MS.gene027656:intron | 25.0% |
| ! | CTAACAAAAGATATGTAGAT+TGG | - | chr5.2:23939620-23939639 | MS.gene027656:intron | 25.0% |
| ! | CTATGTGCATACATTTAATT+AGG | + | chr5.2:23940964-23940983 | None:intergenic | 25.0% |
| ! | GGTCTTTATTACAAACAAAA+GGG | + | chr5.2:23940014-23940033 | None:intergenic | 25.0% |
| ! | GTAGATTGGAGAAAAAAAAA+TGG | - | chr5.2:23939634-23939653 | MS.gene027656:intron | 25.0% |
| ! | GTTATTAACTGGTTAAACTT+GGG | - | chr5.2:23940636-23940655 | MS.gene027656:intron | 25.0% |
| ! | TACATATTATGTTATGGTCT+AGG | - | chr5.2:23942092-23942111 | MS.gene027656:intron | 25.0% |
| ! | TCAATTAGAACTTAAAGGTT+TGG | + | chr5.2:23939465-23939484 | None:intergenic | 25.0% |
| ! | TCTTTGCCAAGAAATTTAAT+TGG | - | chr5.2:23940350-23940369 | MS.gene027656:intron | 25.0% |
| ! | TGGTAGTACATATTATGTTA+TGG | - | chr5.2:23942086-23942105 | MS.gene027656:intron | 25.0% |
| ! | TGGTCTTTATTACAAACAAA+AGG | + | chr5.2:23940015-23940034 | None:intergenic | 25.0% |
| ! | TGTTATTAACTGGTTAAACT+TGG | - | chr5.2:23940635-23940654 | MS.gene027656:intron | 25.0% |
| ! | TTAAAGGAATTCATCCTAAT+TGG | - | chr5.2:23938081-23938100 | MS.gene027656:intron | 25.0% |
| ! | TTAGTAGTTTCATTCTTGTT+TGG | - | chr5.2:23941007-23941026 | MS.gene027656:intron | 25.0% |
| ! | TTCTGACCAATTAAATTTCT+TGG | + | chr5.2:23940359-23940378 | None:intergenic | 25.0% |
| ! | TTTACTCTGTTTGAAAGAAT+GGG | - | chr5.2:23939728-23939747 | MS.gene027656:CDS | 25.0% |
| !! | AATGTATGCACATAGTTTTT+AGG | - | chr5.2:23940969-23940988 | MS.gene027656:intron | 25.0% |
| !! | ACTGATTAGATAAAGCTTTT+GGG | - | chr5.2:23940858-23940877 | MS.gene027656:intron | 25.0% |
| !! | ATGTATGCACATAGTTTTTA+GGG | - | chr5.2:23940970-23940989 | MS.gene027656:intron | 25.0% |
| !! | ATTTTCTAACCTTTTGTTAC+AGG | - | chr5.2:23941885-23941904 | MS.gene027656:intron | 25.0% |
| !! | GATTTGCATATTTTATCTTG+TGG | - | chr5.2:23941749-23941768 | MS.gene027656:intron | 25.0% |
| !! | TTTTACTCTGTTTGAAAGAA+TGG | - | chr5.2:23939727-23939746 | MS.gene027656:CDS | 25.0% |
| !!! | AATAACGGGTTGTTAAAATT+AGG | + | chr5.2:23940152-23940171 | None:intergenic | 25.0% |
| !!! | AGAATTGATTTTAACCTGTT+TGG | + | chr5.2:23941217-23941236 | None:intergenic | 25.0% |
| !!! | ATATTATCTATTGCTGATTC+GGG | - | chr5.2:23942183-23942202 | MS.gene027656:intron | 25.0% |
| !!! | ATTTGAGTATTGATGACTAA+TGG | + | chr5.2:23941973-23941992 | None:intergenic | 25.0% |
| !!! | GTAATTTTTTTCCTTTTGCA+TGG | + | chr5.2:23941999-23942018 | None:intergenic | 25.0% |
| !!! | TACTGATTAGATAAAGCTTT+TGG | - | chr5.2:23940857-23940876 | MS.gene027656:intron | 25.0% |
| !!! | TGCGTTTTTTTCATCTTTTT+GGG | - | chr5.2:23938712-23938731 | MS.gene027656:CDS | 25.0% |
| !!! | TGTTCGAATTTTTTGGTATA+TGG | + | chr5.2:23942301-23942320 | None:intergenic | 25.0% |
| !!! | TTCAGTTCTAAAAGAAATGT+CGG | - | chr5.2:23941502-23941521 | MS.gene027656:CDS | 25.0% |
| !!! | TTGCGTTTTTTTCATCTTTT+TGG | - | chr5.2:23938711-23938730 | MS.gene027656:CDS | 25.0% |
| AAAAGTTTGTCTGTTTGAGA+TGG | - | chr5.2:23939700-23939719 | MS.gene027656:intron | 30.0% | |
| AAAGCTAGTTGAAACCTTTA+AGG | + | chr5.2:23939772-23939791 | None:intergenic | 30.0% | |
| AAATAACAAGCCAGAATACA+AGG | + | chr5.2:23940733-23940752 | None:intergenic | 30.0% | |
| AAATATGCAAATCGAAACAC+TGG | + | chr5.2:23941742-23941761 | None:intergenic | 30.0% | |
| AAGTCTTTGGATGTCATAAA+CGG | + | chr5.2:23940758-23940777 | None:intergenic | 30.0% | |
| AAGTTAATGAAGATGCAGAA+AGG | - | chr5.2:23941444-23941463 | MS.gene027656:CDS | 30.0% | |
| ACAGTGCTATAACGTTATTA+CGG | + | chr5.2:23940219-23940238 | None:intergenic | 30.0% | |
| ACTGCTAATATAGTTGTTGA+TGG | - | chr5.2:23938152-23938171 | MS.gene027656:intron | 30.0% | |
| AGAATCAACAGAAAAAGAAG+AGG | - | chr5.2:23940922-23940941 | MS.gene027656:intron | 30.0% | |
| AGTAAGTAACTAAACTTCCA+AGG | - | chr5.2:23938295-23938314 | MS.gene027656:intron | 30.0% | |
| ATAATGCACATTCCATGTTA+TGG | - | chr5.2:23942441-23942460 | MS.gene027656:CDS | 30.0% | |
| ATGTTTGGATCAGTGATATA+GGG | - | chr5.2:23942207-23942226 | MS.gene027656:intron | 30.0% | |
| ATTCTGCTATATGCTTAGAT+TGG | - | chr5.2:23940311-23940330 | MS.gene027656:intron | 30.0% | |
| CAATGAAATTGTTTATTGGC+TGG | + | chr5.2:23938495-23938514 | None:intergenic | 30.0% | |
| CAGCCAATAAACAATTTCAT+TGG | - | chr5.2:23938493-23938512 | MS.gene027656:intron | 30.0% | |
| CAGTAAATCAAGAAATGAGA+GGG | - | chr5.2:23937995-23938014 | MS.gene027656:CDS | 30.0% | |
| CAGTGACTCAAACTTATTAA+GGG | - | chr5.2:23939903-23939922 | MS.gene027656:intron | 30.0% | |
| GAAAAGCAATAGAAAGAAGA+TGG | + | chr5.2:23941843-23941862 | None:intergenic | 30.0% | |
| GCATACAAATTTATGAACCT+TGG | + | chr5.2:23938315-23938334 | None:intergenic | 30.0% | |
| GCCTAAAAATCAAATTGTAG+AGG | - | chr5.2:23941144-23941163 | MS.gene027656:intron | 30.0% | |
| GCTGAAATTGAAATTAAGAG+TGG | + | chr5.2:23938874-23938893 | None:intergenic | 30.0% | |
| GTGTTGTAAATCACAGATAT+CGG | + | chr5.2:23940277-23940296 | None:intergenic | 30.0% | |
| GTTAAAGCAACTTCTATAGA+AGG | + | chr5.2:23938912-23938931 | None:intergenic | 30.0% | |
| TATCAATTTCAAAATGCGGA+CGG | - | chr5.2:23938340-23938359 | MS.gene027656:intron | 30.0% | |
| TATCTGTGATTTACAACACT+TGG | - | chr5.2:23940278-23940297 | MS.gene027656:intron | 30.0% | |
| TATGTTCATATACTCCATAG+AGG | - | chr5.2:23938783-23938802 | MS.gene027656:intron | 30.0% | |
| TATGTTTGGATCAGTGATAT+AGG | - | chr5.2:23942206-23942225 | MS.gene027656:intron | 30.0% | |
| TCAGTAAATCAAGAAATGAG+AGG | - | chr5.2:23937994-23938013 | MS.gene027656:CDS | 30.0% | |
| TCAGTGACTCAAACTTATTA+AGG | - | chr5.2:23939902-23939921 | MS.gene027656:intron | 30.0% | |
| TGAAAGAGATAAAAGCTGAT+AGG | - | chr5.2:23939316-23939335 | MS.gene027656:intron | 30.0% | |
| TGAGGAGAAATATAAGCAAA+AGG | + | chr5.2:23941668-23941687 | None:intergenic | 30.0% | |
| TGATTATGGCTAAAAGTGAT+TGG | - | chr5.2:23941062-23941081 | MS.gene027656:intron | 30.0% | |
| TGTGATTTCTTCATTTGGTT+GGG | - | chr5.2:23940819-23940838 | MS.gene027656:intron | 30.0% | |
| TTAAATATGTAGACTTGTGC+AGG | - | chr5.2:23940689-23940708 | MS.gene027656:intron | 30.0% | |
| TTGAACTGATACAAGTTTGT+TGG | - | chr5.2:23942383-23942402 | MS.gene027656:CDS | 30.0% | |
| TTGTACTTACAATATCCAGA+CGG | + | chr5.2:23940781-23940800 | None:intergenic | 30.0% | |
| TTTAACCACAAGGAATTTGA+GGG | - | chr5.2:23938926-23938945 | MS.gene027656:intron | 30.0% | |
| TTTGGTCACTATTTACTTTG+CGG | - | chr5.2:23938648-23938667 | MS.gene027656:intron | 30.0% | |
| ! | AAAGGGAAAGTACAACTAAA+AGG | + | chr5.2:23939997-23940016 | None:intergenic | 30.0% |
| ! | CATATCTTTTGTTAGAAACC+TGG | + | chr5.2:23939615-23939634 | None:intergenic | 30.0% |
| ! | CTGATTAGATAAAGCTTTTG+GGG | - | chr5.2:23940859-23940878 | MS.gene027656:intron | 30.0% |
| ! | TATCAGCTTTTATCTCTTTC+AGG | + | chr5.2:23939317-23939336 | None:intergenic | 30.0% |
| ! | TGCATATTTTATCTTGTGGA+CGG | - | chr5.2:23941753-23941772 | MS.gene027656:intron | 30.0% |
| !! | CTACATTTGTGATTTTTCAG+TGG | - | chr5.2:23941776-23941795 | MS.gene027656:intron | 30.0% |
| !! | GCCTCTACAATTTGATTTTT+AGG | + | chr5.2:23941148-23941167 | None:intergenic | 30.0% |
| !! | GCTTAGGATCATTTTTGATA+TGG | - | chr5.2:23937958-23937977 | MS.gene027656:CDS | 30.0% |
| !! | TCTTTCTATTGCTTTTCAGT+TGG | - | chr5.2:23941846-23941865 | MS.gene027656:intron | 30.0% |
| !!! | AGGTTTCAACTAGCTTTTTA+AGG | - | chr5.2:23939775-23939794 | MS.gene027656:CDS | 30.0% |
| !!! | CACATTGAAACTTTTTTGAC+TGG | - | chr5.2:23942066-23942085 | MS.gene027656:intron | 30.0% |
| !!! | CGTTTTTTTCATCTTTTTGG+GGG | - | chr5.2:23938714-23938733 | MS.gene027656:CDS | 30.0% |
| !!! | GCGTTTTTTTCATCTTTTTG+GGG | - | chr5.2:23938713-23938732 | MS.gene027656:CDS | 30.0% |
| !!! | GTTTTTTTCATCTTTTTGGG+GGG | - | chr5.2:23938715-23938734 | MS.gene027656:CDS | 30.0% |
| !!! | TCGAATTTTTTGGTATATGG+TGG | + | chr5.2:23942298-23942317 | None:intergenic | 30.0% |
| !!! | TTCATTCTTGTTTGGTTTTG+CGG | - | chr5.2:23941015-23941034 | MS.gene027656:intron | 30.0% |
| AAAAATTCGAACACACCCTA+AGG | - | chr5.2:23942308-23942327 | MS.gene027656:CDS | 35.0% | |
| AAGCACAAATGCTTTCATGT+TGG | + | chr5.2:23941342-23941361 | None:intergenic | 35.0% | |
| AAGTAAATGTCCATCTGTTC+AGG | + | chr5.2:23938630-23938649 | None:intergenic | 35.0% | |
| AAGTGTGCTAAATAAGGAGT+CGG | + | chr5.2:23939574-23939593 | None:intergenic | 35.0% | |
| AATGCAAAGAAGCCATAACA+TGG | + | chr5.2:23942456-23942475 | None:intergenic | 35.0% | |
| ACTCAAATACACCATGCAAA+AGG | - | chr5.2:23941985-23942004 | MS.gene027656:intron | 35.0% | |
| AGAGAGTTAGAGAAGTGAAA+TGG | + | chr5.2:23938676-23938695 | None:intergenic | 35.0% | |
| ATTAACTGGTTAAACTTGGG+AGG | - | chr5.2:23940639-23940658 | MS.gene027656:intron | 35.0% | |
| CAAACACGTAATTGAGAATG+TGG | - | chr5.2:23938436-23938455 | MS.gene027656:intron | 35.0% | |
| CAACCAAATGAAGAAATCAC+AGG | + | chr5.2:23940820-23940839 | None:intergenic | 35.0% | |
| CATAACCAATTGTTGCCTTA+GGG | + | chr5.2:23942326-23942345 | None:intergenic | 35.0% | |
| CATACATGAAAACTGTTTGG+AGG | - | chr5.2:23941283-23941302 | MS.gene027656:intron | 35.0% | |
| CATTCTCAATTACGTGTTTG+TGG | + | chr5.2:23938436-23938455 | None:intergenic | 35.0% | |
| CGCATATTGCAGAACAATAA+CGG | + | chr5.2:23940167-23940186 | None:intergenic | 35.0% | |
| CTGTGATTTCTTCATTTGGT+TGG | - | chr5.2:23940818-23940837 | MS.gene027656:intron | 35.0% | |
| CTTCATTCAAATAGTTGACC+AGG | + | chr5.2:23940400-23940419 | None:intergenic | 35.0% | |
| CTTTAACCACAAGGAATTTG+AGG | - | chr5.2:23938925-23938944 | MS.gene027656:intron | 35.0% | |
| GAAAAACAAAGTCGATGAAC+AGG | + | chr5.2:23938820-23938839 | None:intergenic | 35.0% | |
| GAACAGATGGACATTTACTT+TGG | - | chr5.2:23938630-23938649 | MS.gene027656:intron | 35.0% | |
| GACAAATCAAGGAAAGGATA+AGG | + | chr5.2:23941914-23941933 | None:intergenic | 35.0% | |
| GCATATTGCAGAACAATAAC+GGG | + | chr5.2:23940166-23940185 | None:intergenic | 35.0% | |
| GCATGGAATACATGTGTTAA+AGG | - | chr5.2:23938065-23938084 | MS.gene027656:intron | 35.0% | |
| GCTATAGTACTTTAGTGTAG+CGG | + | chr5.2:23938378-23938397 | None:intergenic | 35.0% | |
| GCTATTATTTCATGGCATTG+TGG | + | chr5.2:23938402-23938421 | None:intergenic | 35.0% | |
| GGATCTAGTTGTTACAATAC+TGG | - | chr5.2:23939818-23939837 | MS.gene027656:intron | 35.0% | |
| GGATGTGAAGTAGTTATGTT+TGG | - | chr5.2:23941083-23941102 | MS.gene027656:intron | 35.0% | |
| GTAACAGAGAGACTGAATAA+TGG | + | chr5.2:23940523-23940542 | None:intergenic | 35.0% | |
| GTGTCAGAATTTATCATCGA+TGG | - | chr5.2:23939797-23939816 | MS.gene027656:intron | 35.0% | |
| TAAATCAAGAAATGAGAGGG+TGG | - | chr5.2:23937998-23938017 | MS.gene027656:CDS | 35.0% | |
| TACGAACTCTTAGATAAGAC+AGG | + | chr5.2:23939016-23939035 | None:intergenic | 35.0% | |
| TCAGGAGCCAAAAAAAGAAA+GGG | + | chr5.2:23938612-23938631 | None:intergenic | 35.0% | |
| TCATAACCAATTGTTGCCTT+AGG | + | chr5.2:23942327-23942346 | None:intergenic | 35.0% | |
| TGATATAGGGTGGAATGAAA+TGG | - | chr5.2:23942220-23942239 | MS.gene027656:intron | 35.0% | |
| TGCTATATGAAGATGAAGCA+TGG | - | chr5.2:23938048-23938067 | MS.gene027656:CDS | 35.0% | |
| TGTTGACAAAGACTCAAAGT+TGG | + | chr5.2:23939181-23939200 | None:intergenic | 35.0% | |
| TTACAACACTTGGCTGAAAA+AGG | - | chr5.2:23940288-23940307 | MS.gene027656:intron | 35.0% | |
| TTCAGGAGCCAAAAAAAGAA+AGG | + | chr5.2:23938613-23938632 | None:intergenic | 35.0% | |
| ! | AATATAGTTGTTGATGGAGG+TGG | - | chr5.2:23938158-23938177 | MS.gene027656:intron | 35.0% |
| ! | CATATGGTGATGACAAATCA+AGG | + | chr5.2:23941925-23941944 | None:intergenic | 35.0% |
| ! | CCTTATTTAGCACACTTGTT+GGG | - | chr5.2:23939577-23939596 | MS.gene027656:intron | 35.0% |
| ! | GATAATTAGTCTCTTCTCTG+AGG | + | chr5.2:23939435-23939454 | None:intergenic | 35.0% |
| ! | GCTAATATAGTTGTTGATGG+AGG | - | chr5.2:23938155-23938174 | MS.gene027656:intron | 35.0% |
| ! | GTTTTACCAAAGCGAAACAA+CGG | + | chr5.2:23941812-23941831 | None:intergenic | 35.0% |
| ! | TAGAAGTTGCTTTAACCACA+AGG | - | chr5.2:23938916-23938935 | MS.gene027656:intron | 35.0% |
| ! | TCCTTATTTAGCACACTTGT+TGG | - | chr5.2:23939576-23939595 | MS.gene027656:intron | 35.0% |
| ! | TGGTATATGGTGGAATGAAA+TGG | + | chr5.2:23942288-23942307 | None:intergenic | 35.0% |
| ! | TGTATGTTTGCTTCCACTTT+TGG | + | chr5.2:23941269-23941288 | None:intergenic | 35.0% |
| ! | TGTCGTGTGCTATTATTTCA+TGG | + | chr5.2:23938410-23938429 | None:intergenic | 35.0% |
| ! | TGTTTATTGGCTGGAAAACA+CGG | + | chr5.2:23938486-23938505 | None:intergenic | 35.0% |
| ! | TTCTAACCTTTTGTTACAGG+TGG | - | chr5.2:23941888-23941907 | MS.gene027656:intron | 35.0% |
| !! | ACATAGTTTTTAGGGACTGT+TGG | - | chr5.2:23940978-23940997 | MS.gene027656:intron | 35.0% |
| !! | GTATGTTTGCTTCCACTTTT+GGG | + | chr5.2:23941268-23941287 | None:intergenic | 35.0% |
| !! | TATGTTTGCTTCCACTTTTG+GGG | + | chr5.2:23941267-23941286 | None:intergenic | 35.0% |
| !! | TTGTTGGACTTTTAGGTACT+TGG | - | chr5.2:23942410-23942429 | MS.gene027656:CDS | 35.0% |
| !!! | GCTGATTCCCTTTCTTTTTT+TGG | - | chr5.2:23938602-23938621 | MS.gene027656:intron | 35.0% |
| !!! | TAGGGTGTGTTCGAATTTTT+TGG | + | chr5.2:23942308-23942327 | None:intergenic | 35.0% |
| AAATGAAGAAATCACAGGCC+AGG | + | chr5.2:23940815-23940834 | None:intergenic | 40.0% | |
| AACGCATTAGATACAGAACG+AGG | - | chr5.2:23938950-23938969 | MS.gene027656:intron | 40.0% | |
| AATATCCAGACGGAAGTCTT+TGG | + | chr5.2:23940771-23940790 | None:intergenic | 40.0% | |
| AATGAAGAAATCACAGGCCA+GGG | + | chr5.2:23940814-23940833 | None:intergenic | 40.0% | |
| AGAACCGTCAATATACGAAG+AGG | + | chr5.2:23939518-23939537 | None:intergenic | 40.0% | |
| AGGTTCATCAGTTTCCTCTA+TGG | + | chr5.2:23938800-23938819 | None:intergenic | 40.0% | |
| AGTACAACTGATCTTATCCC+TGG | - | chr5.2:23940794-23940813 | MS.gene027656:intron | 40.0% | |
| AGTTCAATGATGTTTCGCCA+AGG | + | chr5.2:23941623-23941642 | None:intergenic | 40.0% | |
| AGTTGTGATCTAGGGATACA+AGG | + | chr5.2:23939412-23939431 | None:intergenic | 40.0% | |
| ATAAGGCCACCTGTAACAAA+AGG | + | chr5.2:23941897-23941916 | None:intergenic | 40.0% | |
| ATGCCCTCTTCGTATATTGA+CGG | - | chr5.2:23939511-23939530 | MS.gene027656:intron | 40.0% | |
| CCCAACAAGTGTGCTAAATA+AGG | + | chr5.2:23939580-23939599 | None:intergenic | 40.0% | |
| CGAAACATCATTGAACTGCA+TGG | - | chr5.2:23941626-23941645 | MS.gene027656:intron | 40.0% | |
| CTGTAAGCAAGCAACCAATT+AGG | + | chr5.2:23938098-23938117 | None:intergenic | 40.0% | |
| GAACCGTCAATATACGAAGA+GGG | + | chr5.2:23939517-23939536 | None:intergenic | 40.0% | |
| GAAGATGCAGAAAGGTGAAT+AGG | - | chr5.2:23941452-23941471 | MS.gene027656:CDS | 40.0% | |
| GGTGATGACAAATCAAGGAA+AGG | + | chr5.2:23941920-23941939 | None:intergenic | 40.0% | |
| GTTAACAGAGTGCATACCAA+CGG | + | chr5.2:23941589-23941608 | None:intergenic | 40.0% | |
| TAAGAGTTCGTATGCCAATC+AGG | - | chr5.2:23939024-23939043 | MS.gene027656:intron | 40.0% | |
| TCAGAAATCCCATCAAGAGT+TGG | + | chr5.2:23938989-23939008 | None:intergenic | 40.0% | |
| TCGATTGAGAGATTCCTGAT+TGG | + | chr5.2:23939041-23939060 | None:intergenic | 40.0% | |
| TCTCTCAATCGAAATACAGC+TGG | - | chr5.2:23939049-23939068 | MS.gene027656:intron | 40.0% | |
| TGGCCTGTGATTTCTTCATT+TGG | - | chr5.2:23940814-23940833 | MS.gene027656:intron | 40.0% | |
| TTAGGACATTGGTAGACATC+TGG | - | chr5.2:23939864-23939883 | MS.gene027656:intron | 40.0% | |
| TTCAATTTGCAGTTCACCGT+TGG | - | chr5.2:23941570-23941589 | MS.gene027656:CDS | 40.0% | |
| TTTATTACCTCCCCCAAAAG+TGG | - | chr5.2:23941253-23941272 | MS.gene027656:intron | 40.0% | |
| TTTGGATCAGTGATATAGGG+TGG | - | chr5.2:23942210-23942229 | MS.gene027656:intron | 40.0% | |
| ! | AATGACCAGTAGTTTGCAGA+AGG | - | chr5.2:23940497-23940516 | MS.gene027656:intron | 40.0% |
| ! | CTGGTTCTTGTCAGTTTCTA+CGG | - | chr5.2:23942517-23942536 | MS.gene027656:CDS | 40.0% |
| ! | CTTGATGTTGCTGTTGCATT+AGG | - | chr5.2:23939846-23939865 | MS.gene027656:intron | 40.0% |
| ! | GTCGGTTACATTTGCTAATC+TGG | + | chr5.2:23939556-23939575 | None:intergenic | 40.0% |
| ! | TAGTGAAGTTGAAGCACTTG+TGG | - | chr5.2:23942478-23942497 | MS.gene027656:CDS | 40.0% |
| ! | TGGCATCTTGTTGGACTTTT+AGG | - | chr5.2:23942403-23942422 | MS.gene027656:CDS | 40.0% |
| ! | TTGCTGTTGCATTAGGACAT+TGG | - | chr5.2:23939853-23939872 | MS.gene027656:intron | 40.0% |
| !! | ACTTTTAGGTACTTGGCTGT+TGG | - | chr5.2:23942417-23942436 | MS.gene027656:CDS | 40.0% |
| !! | ATGTTTGCTTCCACTTTTGG+GGG | + | chr5.2:23941266-23941285 | None:intergenic | 40.0% |
| !! | ATTGCTGATTCGGGTATGTT+TGG | - | chr5.2:23942192-23942211 | MS.gene027656:intron | 40.0% |
| !! | CAAGTTTGTTGGCATCTTGT+TGG | - | chr5.2:23942394-23942413 | MS.gene027656:CDS | 40.0% |
| !! | CTAATCTGGCAAGTTTGTTG+AGG | + | chr5.2:23939542-23939561 | None:intergenic | 40.0% |
| !! | TAAAGCTTTTGGGGACTGTT+CGG | - | chr5.2:23940868-23940887 | MS.gene027656:intron | 40.0% |
| !! | TTTCATCTTTTTGGGGGGTA+GGG | - | chr5.2:23938720-23938739 | MS.gene027656:CDS | 40.0% |
| !! | TTTTCATCTTTTTGGGGGGT+AGG | - | chr5.2:23938719-23938738 | MS.gene027656:CDS | 40.0% |
| !!! | TTTTTTGGCTCCTGAACAGA+TGG | - | chr5.2:23938617-23938636 | MS.gene027656:intron | 40.0% |
| AATGGCCTTCTGCAAACTAC+TGG | + | chr5.2:23940505-23940524 | None:intergenic | 45.0% | |
| ACACACCCTAAGGCAACAAT+TGG | - | chr5.2:23942318-23942337 | MS.gene027656:CDS | 45.0% | |
| AGAAATGAGAGGGTGGAAGA+AGG | - | chr5.2:23938005-23938024 | MS.gene027656:CDS | 45.0% | |
| ATCGAAATACAGCTGGTGTG+TGG | - | chr5.2:23939056-23939075 | MS.gene027656:intron | 45.0% | |
| ATGTGGCTCCAACTCTTGAT+GGG | - | chr5.2:23938978-23938997 | MS.gene027656:intron | 45.0% | |
| CCAGGACTTTCTGATCTAGA+AGG | + | chr5.2:23940382-23940401 | None:intergenic | 45.0% | |
| CCTTCTAGATCAGAAAGTCC+TGG | - | chr5.2:23940379-23940398 | MS.gene027656:intron | 45.0% | |
| CGTTTCCCTCAAATTCCTTG+TGG | + | chr5.2:23938934-23938953 | None:intergenic | 45.0% | |
| GAAATGAGAGGGTGGAAGAA+GGG | - | chr5.2:23938006-23938025 | MS.gene027656:CDS | 45.0% | |
| GAGTGGAAGTCACTTAGAGA+AGG | + | chr5.2:23938857-23938876 | None:intergenic | 45.0% | |
| GTCAATATACGAAGAGGGCA+TGG | + | chr5.2:23939512-23939531 | None:intergenic | 45.0% | |
| TAGTCAATGTCTAGCACAGG+CGG | + | chr5.2:23941368-23941387 | None:intergenic | 45.0% | |
| TATGTGGCTCCAACTCTTGA+TGG | - | chr5.2:23938977-23938996 | MS.gene027656:intron | 45.0% | |
| TCAATGATGTTTCGCCAAGG+AGG | + | chr5.2:23941620-23941639 | None:intergenic | 45.0% | |
| TCGAAATACAGCTGGTGTGT+GGG | - | chr5.2:23939057-23939076 | MS.gene027656:intron | 45.0% | |
| TCTTGTCAGTTTCTACGGTG+AGG | - | chr5.2:23942522-23942541 | MS.gene027656:CDS | 45.0% | |
| TGCTCACTGACCTTGTATTC+TGG | - | chr5.2:23940720-23940739 | MS.gene027656:intron | 45.0% | |
| TGGTTGTCGAGATTGTTCTC+TGG | - | chr5.2:23942498-23942517 | MS.gene027656:CDS | 45.0% | |
| ! | CTCTGAGGAGTTGTGATCTA+GGG | + | chr5.2:23939420-23939439 | None:intergenic | 45.0% |
| ! | TACAGAACGAGGCACTTATG+TGG | - | chr5.2:23938961-23938980 | MS.gene027656:intron | 45.0% |
| ! | TCTCTGAGGAGTTGTGATCT+AGG | + | chr5.2:23939421-23939440 | None:intergenic | 45.0% |
| ! | TTAGCACACTTGTTGGGCTT+AGG | - | chr5.2:23939583-23939602 | MS.gene027656:intron | 45.0% |
| ACCAAAGCGAAACAACGGCA+TGG | + | chr5.2:23941807-23941826 | None:intergenic | 50.0% | |
| AGTCAATGTCTAGCACAGGC+GGG | + | chr5.2:23941367-23941386 | None:intergenic | 50.0% | |
| CGAAATACAGCTGGTGTGTG+GGG | - | chr5.2:23939058-23939077 | MS.gene027656:intron | 50.0% | |
| CGGTAGTCAATGTCTAGCAC+AGG | + | chr5.2:23941371-23941390 | None:intergenic | 50.0% | |
| GACATCCAAAGACTTCCGTC+TGG | - | chr5.2:23940763-23940782 | MS.gene027656:intron | 50.0% | |
| ! | ATACGAAGAGGGCATGGTGA+AGG | + | chr5.2:23939506-23939525 | None:intergenic | 50.0% |
| ! | TACGAAGAGGGCATGGTGAA+GGG | + | chr5.2:23939505-23939524 | None:intergenic | 50.0% |
| ! | TCCATGCCGTTGTTTCGCTT+TGG | - | chr5.2:23941803-23941822 | MS.gene027656:intron | 50.0% |
| !! | CTACTCGAGAGCATCCAAAC+AGG | - | chr5.2:23941200-23941219 | MS.gene027656:intron | 50.0% |
| !! | TTTGCTTCCACTTTTGGGGG+AGG | + | chr5.2:23941263-23941282 | None:intergenic | 50.0% |
| GGAAGAAGGGCGACGAGAAA+CGG | - | chr5.2:23938019-23938038 | MS.gene027656:CDS | 55.0% | |
| GTTAACGCTGTGCTCCTCCT+TGG | - | chr5.2:23941603-23941622 | MS.gene027656:intron | 55.0% | |
| GTTGGGCTTAGGCACAAACC+AGG | - | chr5.2:23939594-23939613 | MS.gene027656:intron | 55.0% | |
| TTGGGGGGTAGGGTGGAATT+TGG | - | chr5.2:23938730-23938749 | MS.gene027656:CDS | 55.0% | |
| !! | CATCTTTTTGGGGGGTAGGG+TGG | - | chr5.2:23938723-23938742 | MS.gene027656:CDS | 55.0% |
| GAAGGGCGACGAGAAACGGT+TGG | - | chr5.2:23938023-23938042 | MS.gene027656:CDS | 60.0% | |
| ! | GAAGAGGGCATGGTGAAGGG+AGG | + | chr5.2:23939502-23939521 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 23937954 | 23942542 | 23937954 | ID=MS.gene027656 |
| chr5.2 | mRNA | 23937954 | 23942542 | 23937954 | ID=MS.gene027656.t1;Parent=MS.gene027656 |
| chr5.2 | exon | 23942295 | 23942542 | 23942295 | ID=MS.gene027656.t1.exon1;Parent=MS.gene027656.t1 |
| chr5.2 | CDS | 23942295 | 23942542 | 23942295 | ID=cds.MS.gene027656.t1;Parent=MS.gene027656.t1 |
| chr5.2 | exon | 23941827 | 23941860 | 23941827 | ID=MS.gene027656.t1.exon2;Parent=MS.gene027656.t1 |
| chr5.2 | CDS | 23941827 | 23941860 | 23941827 | ID=cds.MS.gene027656.t1;Parent=MS.gene027656.t1 |
| chr5.2 | exon | 23941391 | 23941603 | 23941391 | ID=MS.gene027656.t1.exon3;Parent=MS.gene027656.t1 |
| chr5.2 | CDS | 23941391 | 23941603 | 23941391 | ID=cds.MS.gene027656.t1;Parent=MS.gene027656.t1 |
| chr5.2 | exon | 23939706 | 23939795 | 23939706 | ID=MS.gene027656.t1.exon4;Parent=MS.gene027656.t1 |
| chr5.2 | CDS | 23939706 | 23939795 | 23939706 | ID=cds.MS.gene027656.t1;Parent=MS.gene027656.t1 |
| chr5.2 | exon | 23938849 | 23938914 | 23938849 | ID=MS.gene027656.t1.exon5;Parent=MS.gene027656.t1 |
| chr5.2 | CDS | 23938849 | 23938914 | 23938849 | ID=cds.MS.gene027656.t1;Parent=MS.gene027656.t1 |
| chr5.2 | exon | 23938672 | 23938763 | 23938672 | ID=MS.gene027656.t1.exon6;Parent=MS.gene027656.t1 |
| chr5.2 | CDS | 23938672 | 23938763 | 23938672 | ID=cds.MS.gene027656.t1;Parent=MS.gene027656.t1 |
| chr5.2 | exon | 23938542 | 23938589 | 23938542 | ID=MS.gene027656.t1.exon7;Parent=MS.gene027656.t1 |
| chr5.2 | CDS | 23938542 | 23938589 | 23938542 | ID=cds.MS.gene027656.t1;Parent=MS.gene027656.t1 |
| chr5.2 | exon | 23937954 | 23938071 | 23937954 | ID=MS.gene027656.t1.exon8;Parent=MS.gene027656.t1 |
| chr5.2 | CDS | 23937954 | 23938071 | 23937954 | ID=cds.MS.gene027656.t1;Parent=MS.gene027656.t1 |
| Gene Sequence |
| Protein sequence |
