Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027658.t1 | XP_003613199.1 | 99.8 | 423 | 1 | 0 | 1 | 423 | 1 | 423 | 2.00E-240 | 841.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027658.t1 | Q9SGY2 | 88.2 | 423 | 50 | 0 | 1 | 423 | 1 | 423 | 1.7e-219 | 763.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027658.t1 | G7K076 | 99.8 | 423 | 1 | 0 | 1 | 423 | 1 | 423 | 1.5e-240 | 841.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90397 | MS.gene027658 | PPI |
| MS.gene027658 | MS.gene60924 | PPI |
| MS.gene027658 | MS.gene53461 | PPI |
| MS.gene027658 | MS.gene60923 | PPI |
| MS.gene027658 | MS.gene44351 | PPI |
| MS.gene065831 | MS.gene027658 | PPI |
| MS.gene80717 | MS.gene027658 | PPI |
| MS.gene92246 | MS.gene027658 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027658.t1 | MTR_5g033920 | 99.764 | 423 | 1 | 0 | 1 | 423 | 1 | 423 | 0.0 | 866 |
| MS.gene027658.t1 | MTR_5g033920 | 98.140 | 430 | 1 | 1 | 1 | 423 | 1 | 430 | 0.0 | 857 |
| MS.gene027658.t1 | MTR_2g062920 | 91.726 | 423 | 35 | 0 | 1 | 423 | 1 | 423 | 0.0 | 801 |
| MS.gene027658.t1 | MTR_2g062920 | 92.562 | 363 | 27 | 0 | 61 | 423 | 1 | 363 | 0.0 | 694 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027658.t1 | AT1G10670 | 88.180 | 423 | 50 | 0 | 1 | 423 | 1 | 423 | 0.0 | 781 |
| MS.gene027658.t1 | AT1G10670 | 88.180 | 423 | 50 | 0 | 1 | 423 | 1 | 423 | 0.0 | 781 |
| MS.gene027658.t1 | AT1G10670 | 88.180 | 423 | 50 | 0 | 1 | 423 | 1 | 423 | 0.0 | 781 |
| MS.gene027658.t1 | AT1G60810 | 87.234 | 423 | 54 | 0 | 1 | 423 | 1 | 423 | 0.0 | 776 |
| MS.gene027658.t1 | AT1G60810 | 87.234 | 423 | 54 | 0 | 1 | 423 | 1 | 423 | 0.0 | 776 |
| MS.gene027658.t1 | AT1G10670 | 84.199 | 443 | 50 | 1 | 1 | 423 | 1 | 443 | 0.0 | 767 |
| MS.gene027658.t1 | AT1G09430 | 81.862 | 419 | 76 | 0 | 1 | 419 | 1 | 419 | 0.0 | 736 |
Find 100 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCTTTGTTACAGGTTTA+TGG | 0.135148 | 5.2:-23916127 | MS.gene027658:intron |
| GAGCACTTTAAGAGACTTTC+TGG | 0.142923 | 5.2:-23920428 | MS.gene027658:CDS |
| GTGAAACCTGACATGTTATT+TGG | 0.166150 | 5.2:-23919517 | MS.gene027658:CDS |
| ATGGCTTTCTTCTTCTAAAT+TGG | 0.172223 | 5.2:-23919542 | MS.gene027658:CDS |
| TTTCCATCAACCAATGTAAA+AGG | 0.245174 | 5.2:+23918569 | None:intergenic |
| GCCACTGAGTCTTTCATTCA+TGG | 0.261851 | 5.2:-23918331 | MS.gene027658:CDS |
| TGGTTTGGTTGCCTTGAATT+TGG | 0.268556 | 5.2:-23919479 | MS.gene027658:CDS |
| TGAACCCAAAGGGCCGAATT+TGG | 0.281078 | 5.2:-23917449 | MS.gene027658:CDS |
| CGAATTTGGACAATGGTTGC+TGG | 0.300252 | 5.2:-23917435 | MS.gene027658:CDS |
| GAATCGATATTGAAGAGAAT+TGG | 0.314663 | 5.2:-23919133 | MS.gene027658:CDS |
| ATTGAAAATATAGGTTGAAA+TGG | 0.324243 | 5.2:-23919279 | MS.gene027658:intron |
| TTCAATTAGCTAACCTCAAT+CGG | 0.325607 | 5.2:+23916238 | None:intergenic |
| GATCCAGGAATCAAAGTTAA+AGG | 0.325987 | 5.2:-23916353 | MS.gene027658:intron |
| CGAGCACTTGGAGAGGAAAT+TGG | 0.328982 | 5.2:-23916265 | MS.gene027658:CDS |
| GGTTGCCTTGAATTTGGATT+TGG | 0.332415 | 5.2:-23919473 | MS.gene027658:CDS |
| TTGTCCAAATTCGGCCCTTT+GGG | 0.337602 | 5.2:+23917445 | None:intergenic |
| TTAATACAGGTAGGCGATCT+TGG | 0.342068 | 5.2:-23917293 | MS.gene027658:intron |
| ATTGTCCAAATTCGGCCCTT+TGG | 0.347305 | 5.2:+23917444 | None:intergenic |
| ATACCAGTCATTGTTGCTTC+AGG | 0.359407 | 5.2:+23916103 | None:intergenic |
| CTGCAAAACCTCCTCTTCAT+TGG | 0.362473 | 5.2:+23917226 | None:intergenic |
| TGATGGAAAGCCTTATCCTT+TGG | 0.370162 | 5.2:-23918555 | MS.gene027658:CDS |
| CAGCAACCATTGTCCAAATT+CGG | 0.373694 | 5.2:+23917436 | None:intergenic |
| CTTACTTGTGCAGACTTGAT+AGG | 0.377362 | 5.2:+23920395 | None:intergenic |
| ACTTGTTGCAACCCTTCCCT+TGG | 0.384681 | 5.2:-23918939 | MS.gene027658:CDS |
| CTTGGCTTTGCAAATGAGCT+TGG | 0.386907 | 5.2:-23917275 | MS.gene027658:CDS |
| TTGAAAATATAGGTTGAAAT+GGG | 0.391559 | 5.2:-23919278 | MS.gene027658:intron |
| AATCGATATTGAAGAGAATT+GGG | 0.403789 | 5.2:-23919132 | MS.gene027658:CDS |
| CTTTCACAAATGAAGCAACT+TGG | 0.406529 | 5.2:+23919449 | None:intergenic |
| AGGTAATACTCTTCATTATG+TGG | 0.426783 | 5.2:+23919209 | None:intergenic |
| ATTGAATTTCCATTGCCATT+TGG | 0.427635 | 5.2:-23918367 | MS.gene027658:CDS |
| TCAACAATGAAAGTTGTTAT+CGG | 0.431360 | 5.2:+23919242 | None:intergenic |
| TGAAACCTGACATGTTATTT+GGG | 0.440993 | 5.2:-23919516 | MS.gene027658:CDS |
| CGCTTCCCAAATAACATGTC+AGG | 0.451633 | 5.2:+23919511 | None:intergenic |
| ATAGATCAAGGGAGAAATTG+AGG | 0.459317 | 5.2:-23918795 | MS.gene027658:intron |
| CATTCATGGATTAGATGAAA+AGG | 0.460623 | 5.2:-23918317 | MS.gene027658:intron |
| TGTTGCAACCCTTCCCTTGG+AGG | 0.460679 | 5.2:-23918936 | MS.gene027658:intron |
| TGGCATAATTCGGGCACTAA+AGG | 0.461705 | 5.2:-23916464 | MS.gene027658:CDS |
| TGCAAAACCTCCTCTTCATT+GGG | 0.463887 | 5.2:+23917227 | None:intergenic |
| GAATTTGGACAATGGTTGCT+GGG | 0.465292 | 5.2:-23917434 | MS.gene027658:CDS |
| TTTGGGAAGCGTGGTAAAAG+TGG | 0.468444 | 5.2:-23919499 | MS.gene027658:CDS |
| TAAATTGAATTTACCTCCAA+GGG | 0.486977 | 5.2:+23918923 | None:intergenic |
| AATGACTGGTATATGCAAAC+AGG | 0.488870 | 5.2:-23916092 | MS.gene027658:CDS |
| AATTTCCATTGCCATTTGGA+AGG | 0.489649 | 5.2:-23918363 | MS.gene027658:CDS |
| CCTCTCATATCCAAAGGATA+AGG | 0.491900 | 5.2:+23918545 | None:intergenic |
| TGATTCTAAGAGATTGTTGA+AGG | 0.494704 | 5.2:-23920450 | MS.gene027658:CDS |
| ACTTACATCAATTACAACTC+TGG | 0.505750 | 5.2:+23917199 | None:intergenic |
| TTGGGCCAAATCCAAATTCA+AGG | 0.506250 | 5.2:+23919468 | None:intergenic |
| TTCACTGTGTTGAACCCAAA+GGG | 0.510313 | 5.2:-23917459 | MS.gene027658:CDS |
| GGAAATTGGCATCCCGATTG+AGG | 0.511227 | 5.2:-23916251 | MS.gene027658:intron |
| GTCTGTCAGAGACAATGTTA+AGG | 0.515654 | 5.2:+23919189 | None:intergenic |
| GGAAACTATGCAGAATATAG+TGG | 0.517156 | 5.2:-23917254 | MS.gene027658:CDS |
| GAAGCGTGGTAAAAGTGGTT+TGG | 0.519204 | 5.2:-23919494 | MS.gene027658:CDS |
| TCAATTAGCTAACCTCAATC+GGG | 0.519937 | 5.2:+23916239 | None:intergenic |
| TCTTCATTATGTGGGATGAA+AGG | 0.519980 | 5.2:+23919218 | None:intergenic |
| TTAAATTGAATTTACCTCCA+AGG | 0.523717 | 5.2:+23918922 | None:intergenic |
| TATTGAAGAGAATTGGGATA+AGG | 0.523886 | 5.2:-23919126 | MS.gene027658:intron |
| TTGAATTTACCTCCAAGGGA+AGG | 0.525190 | 5.2:+23918927 | None:intergenic |
| AGGGAAGGGTTGCAACAAGT+GGG | 0.528893 | 5.2:+23918942 | None:intergenic |
| GGTTGAAATGGGTGGATGCA+AGG | 0.529860 | 5.2:-23919267 | MS.gene027658:CDS |
| TTTCACAAATGAAGCAACTT+GGG | 0.530236 | 5.2:+23919450 | None:intergenic |
| GGTAATACTCTTCATTATGT+GGG | 0.530693 | 5.2:+23919210 | None:intergenic |
| AACATTGTCTCTGACAGACT+TGG | 0.532898 | 5.2:-23919185 | MS.gene027658:CDS |
| GAAAGAGCGTCTTGGTAAAG+AGG | 0.535308 | 5.2:-23919431 | MS.gene027658:intron |
| TGCACCTTTATGTGAGGCGA+GGG | 0.535874 | 5.2:-23916321 | MS.gene027658:CDS |
| TGAATTTACCTCCAAGGGAA+GGG | 0.537577 | 5.2:+23918928 | None:intergenic |
| GGACCTGAAGCAACAATGAC+TGG | 0.541528 | 5.2:-23916106 | MS.gene027658:CDS |
| AAGGGAAGGGTTGCAACAAG+TGG | 0.542096 | 5.2:+23918941 | None:intergenic |
| AGGGCTCTTGTTATAGGTGG+AGG | 0.545602 | 5.2:-23916523 | MS.gene027658:CDS |
| GCACTCATAACCCTTCCAAA+TGG | 0.556781 | 5.2:+23918352 | None:intergenic |
| ATTTCCATTGCCATTTGGAA+GGG | 0.562037 | 5.2:-23918362 | MS.gene027658:CDS |
| GTTGAAATGGGTGGATGCAA+GGG | 0.564098 | 5.2:-23919266 | MS.gene027658:CDS |
| TAGTGTCATCTACGCTGATA+CGG | 0.565668 | 5.2:-23917403 | MS.gene027658:intron |
| TCATTTGTGAAAGAGCGTCT+TGG | 0.569120 | 5.2:-23919439 | MS.gene027658:CDS |
| AGAAATTGAGGAATTTCTCA+AGG | 0.569980 | 5.2:-23918783 | MS.gene027658:CDS |
| ATAACCCTTCCAAATGGCAA+TGG | 0.584751 | 5.2:+23918358 | None:intergenic |
| AAAAGGGCTCTTGTTATAGG+TGG | 0.587346 | 5.2:-23916526 | MS.gene027658:CDS |
| AAAATATAGGTTGAAATGGG+TGG | 0.588383 | 5.2:-23919275 | MS.gene027658:intron |
| ACCTGAAATGGATAGTTAAG+CGG | 0.591889 | 5.2:+23916048 | None:intergenic |
| CCTTATCCTTTGGATATGAG+AGG | 0.593802 | 5.2:-23918545 | MS.gene027658:CDS |
| TGTGCAACTGCCGACCCCGA+TGG | 0.600634 | 5.2:-23916553 | MS.gene027658:CDS |
| AGCTCGCCTCTCATATCCAA+AGG | 0.606308 | 5.2:+23918539 | None:intergenic |
| GGGAAGGGTTGCAACAAGTG+GGG | 0.607919 | 5.2:+23918943 | None:intergenic |
| CTTTAAGAGACTTTCTGGCA+AGG | 0.607933 | 5.2:-23920423 | MS.gene027658:CDS |
| AATTCGGGCACTAAAGGAGA+AGG | 0.611871 | 5.2:-23916458 | MS.gene027658:intron |
| CACCTTTATGTGAGGCGAGG+GGG | 0.612540 | 5.2:-23916319 | MS.gene027658:CDS |
| AATTTGGACAATGGTTGCTG+GGG | 0.612808 | 5.2:-23917433 | MS.gene027658:CDS |
| TTTCACTGAGCTGCAAGACA+AGG | 0.614695 | 5.2:-23919569 | MS.gene027658:CDS |
| TAGTGGTGCACCCAATGAAG+AGG | 0.615153 | 5.2:-23917237 | MS.gene027658:CDS |
| ATGCACCTTTATGTGAGGCG+AGG | 0.615319 | 5.2:-23916322 | MS.gene027658:CDS |
| AGCTGCAAGACAAGGAACAA+TGG | 0.615951 | 5.2:-23919561 | MS.gene027658:CDS |
| AAAGGGCCGAATTTGGACAA+TGG | 0.617352 | 5.2:-23917442 | MS.gene027658:CDS |
| GATGTAAGAGACACTCCCGT+TGG | 0.624325 | 5.2:+23918977 | None:intergenic |
| ATTTGGACAATGGTTGCTGG+GGG | 0.626405 | 5.2:-23917432 | MS.gene027658:CDS |
| GACATGTTATTTGGGAAGCG+TGG | 0.630841 | 5.2:-23919508 | MS.gene027658:CDS |
| TGGTGCACCCAATGAAGAGG+AGG | 0.642713 | 5.2:-23917234 | MS.gene027658:CDS |
| CAAGAATGCACCTTTATGTG+AGG | 0.651491 | 5.2:-23916327 | MS.gene027658:CDS |
| ATTCACTGTGTTGAACCCAA+AGG | 0.654553 | 5.2:-23917460 | MS.gene027658:CDS |
| GCACCTTTATGTGAGGCGAG+GGG | 0.663860 | 5.2:-23916320 | MS.gene027658:CDS |
| TTGCAGCTCAGTGAAATCAG+TGG | 0.670844 | 5.2:+23919576 | None:intergenic |
| TCCATGAATGAAAGACTCAG+TGG | 0.707219 | 5.2:+23918330 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATCTTTAAATTGAT+AGG | + | chr5.2:23919396-23919415 | None:intergenic | 10.0% |
| !! | TCAATTTAAAGATTTAATTA+TGG | - | chr5.2:23919397-23919416 | MS.gene027658:intron | 10.0% |
| !! | AAATATTAATTAATACAGGT+AGG | - | chr5.2:23919237-23919256 | MS.gene027658:CDS | 15.0% |
| !! | TGCTAAATATTAATTAATAC+AGG | - | chr5.2:23919233-23919252 | MS.gene027658:CDS | 15.0% |
| !! | TTGAATAAAATTGTACATTT+AGG | + | chr5.2:23918267-23918286 | None:intergenic | 15.0% |
| !!! | GCTATTTTTTAAATTATTAC+TGG | - | chr5.2:23918933-23918952 | MS.gene027658:intron | 15.0% |
| !!! | TTTATTTTGAACTTATCTTA+TGG | + | chr5.2:23916803-23916822 | None:intergenic | 15.0% |
| !!! | TTTTGTGATAAATTTTTAAG+TGG | - | chr5.2:23916267-23916286 | MS.gene027658:CDS | 15.0% |
| !! | AAAATATATCAATGGTTGAA+AGG | + | chr5.2:23917228-23917247 | None:intergenic | 20.0% |
| !! | AAATATATCAATGGTTGAAA+GGG | + | chr5.2:23917227-23917246 | None:intergenic | 20.0% |
| !! | AAATTGGTCCAATAAATTAT+TGG | + | chr5.2:23919665-23919684 | None:intergenic | 20.0% |
| !! | AAGGTAAACTAATATAACTT+TGG | - | chr5.2:23918241-23918260 | MS.gene027658:intron | 20.0% |
| !! | AATCTTAAAAGAAAACAGTA+CGG | + | chr5.2:23917886-23917905 | None:intergenic | 20.0% |
| !! | ACAAAAAATATGTACTTAAC+AGG | + | chr5.2:23918329-23918348 | None:intergenic | 20.0% |
| !! | ATAAGCTGAAAAATATCTTA+TGG | - | chr5.2:23916707-23916726 | MS.gene027658:intron | 20.0% |
| !! | GTGTTATAAGTTAGTTAATT+TGG | + | chr5.2:23919713-23919732 | None:intergenic | 20.0% |
| !! | TAAGCTGAAAAATATCTTAT+GGG | - | chr5.2:23916708-23916727 | MS.gene027658:intron | 20.0% |
| !! | TTGTTCAATACTGTAAATAA+AGG | + | chr5.2:23920334-23920353 | None:intergenic | 20.0% |
| !! | TTGTTCGTAAAATAACAAAT+TGG | + | chr5.2:23917646-23917665 | None:intergenic | 20.0% |
| !!! | AATGTTATGTGTTATTTTGA+AGG | - | chr5.2:23918073-23918092 | MS.gene027658:intron | 20.0% |
| !!! | AGCAGTTTATTAATTCTTTT+TGG | - | chr5.2:23920389-23920408 | MS.gene027658:intron | 20.0% |
| !!! | ATATCACTTTTACTTAAAGT+AGG | - | chr5.2:23916534-23916553 | MS.gene027658:CDS | 20.0% |
| !!! | ATCTTTTGCCAATAATTTAT+TGG | - | chr5.2:23919654-23919673 | MS.gene027658:intron | 20.0% |
| !!! | ATTGAAAATATAGGTTGAAA+TGG | - | chr5.2:23917260-23917279 | MS.gene027658:CDS | 20.0% |
| !!! | GTTTTTTTAACTTCTTACTT+GGG | - | chr5.2:23918347-23918366 | MS.gene027658:CDS | 20.0% |
| !!! | TGTTTTTTTAACTTCTTACT+TGG | - | chr5.2:23918346-23918365 | MS.gene027658:CDS | 20.0% |
| !!! | TTCACGACAATTTTTTTAAA+TGG | + | chr5.2:23916411-23916430 | None:intergenic | 20.0% |
| !!! | TTGAAAATATAGGTTGAAAT+GGG | - | chr5.2:23917261-23917280 | MS.gene027658:CDS | 20.0% |
| !!! | TTGTAATTTTGGTTAATTCA+GGG | - | chr5.2:23919787-23919806 | MS.gene027658:intron | 20.0% |
| !!! | TTTCATTGTCTTCATTTTAT+GGG | + | chr5.2:23918528-23918547 | None:intergenic | 20.0% |
| !!! | TTTGTAATTTTGGTTAATTC+AGG | - | chr5.2:23919786-23919805 | MS.gene027658:intron | 20.0% |
| !!! | TTTTTTTAACTTCTTACTTG+GGG | - | chr5.2:23918348-23918367 | MS.gene027658:CDS | 20.0% |
| ! | AATCGATATTGAAGAGAATT+GGG | - | chr5.2:23917407-23917426 | MS.gene027658:CDS | 25.0% |
| ! | AATGTAAGACAATGAATGTA+AGG | + | chr5.2:23917172-23917191 | None:intergenic | 25.0% |
| ! | ACAGAGAATGAAATGATAAT+CGG | - | chr5.2:23918603-23918622 | MS.gene027658:intron | 25.0% |
| ! | ACGTGACTAAAATATATCAA+TGG | + | chr5.2:23917236-23917255 | None:intergenic | 25.0% |
| ! | ATATCTTTGTTACAGGTTTA+TGG | - | chr5.2:23920412-23920431 | MS.gene027658:CDS | 25.0% |
| ! | ATTATCCATAACCTTCAAAT+TGG | - | chr5.2:23917505-23917524 | MS.gene027658:intron | 25.0% |
| ! | CACGTGTTTATTGAAAATAT+AGG | - | chr5.2:23917251-23917270 | MS.gene027658:CDS | 25.0% |
| ! | GTTAATTATGTCCGAATTTA+TGG | - | chr5.2:23916311-23916330 | MS.gene027658:CDS | 25.0% |
| ! | TAAATTGAATTTACCTCCAA+GGG | + | chr5.2:23917619-23917638 | None:intergenic | 25.0% |
| ! | TCAACAATGAAAGTTGTTAT+CGG | + | chr5.2:23917300-23917319 | None:intergenic | 25.0% |
| ! | TCTTGTTAGTTCATACTAAT+GGG | - | chr5.2:23918098-23918117 | MS.gene027658:intron | 25.0% |
| ! | TTAAATTGAATTTACCTCCA+AGG | + | chr5.2:23917620-23917639 | None:intergenic | 25.0% |
| !! | AATAGAGTAAACACTCATTT+TGG | + | chr5.2:23919849-23919868 | None:intergenic | 25.0% |
| !! | GTAGGAGTAAACAATAATTT+TGG | - | chr5.2:23919555-23919574 | MS.gene027658:CDS | 25.0% |
| !! | GTGTAATTTAAAATGTTGCA+AGG | - | chr5.2:23918410-23918429 | MS.gene027658:intron | 25.0% |
| !! | GTTTCATTGTCTTCATTTTA+TGG | + | chr5.2:23918529-23918548 | None:intergenic | 25.0% |
| !! | TAAGAGAAAATTTTATGTGC+AGG | + | chr5.2:23917486-23917505 | None:intergenic | 25.0% |
| !! | TACAGTATTGAACAATCAAA+TGG | - | chr5.2:23920339-23920358 | MS.gene027658:intron | 25.0% |
| !! | TGATGTCTCTAAAAAACTAT+AGG | - | chr5.2:23919447-23919466 | MS.gene027658:CDS | 25.0% |
| !! | TTTTACGAACAAACTAACTT+TGG | - | chr5.2:23917654-23917673 | MS.gene027658:intron | 25.0% |
| !! | TTTTTGGATATCTTTGTTAC+AGG | - | chr5.2:23920405-23920424 | MS.gene027658:CDS | 25.0% |
| !!! | CTTGAGTATTGAATTTGTTT+TGG | - | chr5.2:23916917-23916936 | MS.gene027658:intron | 25.0% |
| !!! | GCTTATTGATTTCTGAAAAA+TGG | + | chr5.2:23916855-23916874 | None:intergenic | 25.0% |
| !!! | TAAGACTGTTTTTATTCCAA+CGG | - | chr5.2:23917546-23917565 | MS.gene027658:intron | 25.0% |
| !!! | TTTTTTAACTTCTTACTTGG+GGG | - | chr5.2:23918349-23918368 | MS.gene027658:CDS | 25.0% |
| AACAATCAAATGGTGCTTAA+TGG | - | chr5.2:23920349-23920368 | MS.gene027658:intron | 30.0% | |
| AAGTAAAACTCTACTGTTGT+GGG | + | chr5.2:23920111-23920130 | None:intergenic | 30.0% | |
| ACAATCAAATGGTGCTTAAT+GGG | - | chr5.2:23920350-23920369 | MS.gene027658:intron | 30.0% | |
| ACAATGAATGTAAGGTTTGA+AGG | + | chr5.2:23917164-23917183 | None:intergenic | 30.0% | |
| ACTTACATCAATTACAACTC+TGG | + | chr5.2:23919343-23919362 | None:intergenic | 30.0% | |
| AGAAATTGAGGAATTTCTCA+AGG | - | chr5.2:23917756-23917775 | MS.gene027658:intron | 30.0% | |
| AGCATATTAAGCACAATGTA+TGG | + | chr5.2:23916762-23916781 | None:intergenic | 30.0% | |
| AGGTAATACTCTTCATTATG+TGG | + | chr5.2:23917333-23917352 | None:intergenic | 30.0% | |
| ATATGACCAAACCAATTTGA+AGG | + | chr5.2:23917519-23917538 | None:intergenic | 30.0% | |
| ATCTTCCCTAACCATAAATT+CGG | + | chr5.2:23916325-23916344 | None:intergenic | 30.0% | |
| ATGGCTTTCTTCTTCTAAAT+TGG | - | chr5.2:23916997-23917016 | MS.gene027658:intron | 30.0% | |
| ATTGAATGCAACTACATGTT+TGG | + | chr5.2:23918909-23918928 | None:intergenic | 30.0% | |
| ATTGAATTTCCATTGCCATT+TGG | - | chr5.2:23918172-23918191 | MS.gene027658:intron | 30.0% | |
| ATTGGCAAAAGATATACTCA+AGG | + | chr5.2:23919647-23919666 | None:intergenic | 30.0% | |
| CGTGTATGCAAGTTTAATAA+AGG | - | chr5.2:23916828-23916847 | MS.gene027658:intron | 30.0% | |
| GAATCGATATTGAAGAGAAT+TGG | - | chr5.2:23917406-23917425 | MS.gene027658:CDS | 30.0% | |
| GGTAATACTCTTCATTATGT+GGG | + | chr5.2:23917332-23917351 | None:intergenic | 30.0% | |
| GTAGAAAGAACACAATTGAT+TGG | - | chr5.2:23916449-23916468 | MS.gene027658:intron | 30.0% | |
| TAACATATCCTAGAAGAAAG+TGG | + | chr5.2:23918802-23918821 | None:intergenic | 30.0% | |
| TAAGTAAAACTCTACTGTTG+TGG | + | chr5.2:23920112-23920131 | None:intergenic | 30.0% | |
| TAATGGGAAAAATTGTGTTG+AGG | - | chr5.2:23920366-23920385 | MS.gene027658:intron | 30.0% | |
| TACTACAATGGACATATTCA+AGG | - | chr5.2:23919749-23919768 | MS.gene027658:intron | 30.0% | |
| TATGTCCGAATTTATGGTTA+GGG | - | chr5.2:23916317-23916336 | MS.gene027658:CDS | 30.0% | |
| TATTGAAGAGAATTGGGATA+AGG | - | chr5.2:23917413-23917432 | MS.gene027658:CDS | 30.0% | |
| TATTGGACCAATTTGACTAA+TGG | - | chr5.2:23919671-23919690 | MS.gene027658:intron | 30.0% | |
| TCATCAATAAGCCATTGATA+CGG | + | chr5.2:23918968-23918987 | None:intergenic | 30.0% | |
| TCATTTGACATACGTATTCA+AGG | - | chr5.2:23919822-23919841 | MS.gene027658:intron | 30.0% | |
| TTATGTCCGAATTTATGGTT+AGG | - | chr5.2:23916316-23916335 | MS.gene027658:CDS | 30.0% | |
| TTCAATTAGCTAACCTCAAT+CGG | + | chr5.2:23920304-23920323 | None:intergenic | 30.0% | |
| TTCACAAGTTATGAAACTGA+TGG | - | chr5.2:23918500-23918519 | MS.gene027658:intron | 30.0% | |
| TTGAATATGTCCATTGTAGT+AGG | + | chr5.2:23919750-23919769 | None:intergenic | 30.0% | |
| TTGAATGCAACTACATGTTT+GGG | + | chr5.2:23918908-23918927 | None:intergenic | 30.0% | |
| TTGGCAAAAGATATACTCAA+GGG | + | chr5.2:23919646-23919665 | None:intergenic | 30.0% | |
| TTTATGTGCAGGAAATAGAT+GGG | + | chr5.2:23917475-23917494 | None:intergenic | 30.0% | |
| TTTCAAGAACTTCAAGAAGT+AGG | - | chr5.2:23918038-23918057 | MS.gene027658:intron | 30.0% | |
| TTTCACAAATGAAGCAACTT+GGG | + | chr5.2:23917092-23917111 | None:intergenic | 30.0% | |
| TTTCCATCAACCAATGTAAA+AGG | + | chr5.2:23917973-23917992 | None:intergenic | 30.0% | |
| ! | AAAATATAGGTTGAAATGGG+TGG | - | chr5.2:23917264-23917283 | MS.gene027658:CDS | 30.0% |
| ! | AAGATGAAAAGTATGTGTTG+TGG | + | chr5.2:23917441-23917460 | None:intergenic | 30.0% |
| ! | AGAGATGAATCCTTTTACAT+TGG | - | chr5.2:23917960-23917979 | MS.gene027658:intron | 30.0% |
| ! | CTTTTAAACTATTGTGATCC+AGG | - | chr5.2:23920171-23920190 | MS.gene027658:intron | 30.0% |
| ! | GTCTTGTTAGTTCATACTAA+TGG | - | chr5.2:23918097-23918116 | MS.gene027658:intron | 30.0% |
| ! | TACTTTTAGTGGCATAATTC+GGG | - | chr5.2:23920066-23920085 | MS.gene027658:intron | 30.0% |
| ! | TGAAACCTGACATGTTATTT+GGG | - | chr5.2:23917023-23917042 | MS.gene027658:intron | 30.0% |
| ! | TGATTCTAAGAGATTGTTGA+AGG | - | chr5.2:23916089-23916108 | MS.gene027658:CDS | 30.0% |
| ! | TTGTTGTTGTTGTATTCTGT+AGG | - | chr5.2:23919537-23919556 | MS.gene027658:CDS | 30.0% |
| ! | TTTTATGTGCAGGAAATAGA+TGG | + | chr5.2:23917476-23917495 | None:intergenic | 30.0% |
| !! | AATCCTTTTACATTGGTTGA+TGG | - | chr5.2:23917967-23917986 | MS.gene027658:intron | 30.0% |
| !! | AATTGGTTTGGTCATATTTC+AGG | - | chr5.2:23917522-23917541 | MS.gene027658:intron | 30.0% |
| !! | ACTTTCTTCTAGGATATGTT+AGG | - | chr5.2:23918801-23918820 | MS.gene027658:intron | 30.0% |
| !! | AGTTTGTTAGCAAATGTGTT+AGG | + | chr5.2:23918670-23918689 | None:intergenic | 30.0% |
| !! | CATTCATGGATTAGATGAAA+AGG | - | chr5.2:23918222-23918241 | MS.gene027658:intron | 30.0% |
| !! | CTACTTTTAGTGGCATAATT+CGG | - | chr5.2:23920065-23920084 | MS.gene027658:intron | 30.0% |
| !! | GTGATTTTCACTCTTTTTCA+AGG | - | chr5.2:23917778-23917797 | MS.gene027658:intron | 30.0% |
| !!! | AAGACTGTTTTTATTCCAAC+GGG | - | chr5.2:23917547-23917566 | MS.gene027658:intron | 30.0% |
| !!! | GCACTGTTTTTATAGATCAA+GGG | - | chr5.2:23917733-23917752 | MS.gene027658:intron | 30.0% |
| !!! | TCAAGGGTGTTTATGTATTT+TGG | + | chr5.2:23919630-23919649 | None:intergenic | 30.0% |
| !!! | TGCACTGTTTTTATAGATCA+AGG | - | chr5.2:23917732-23917751 | MS.gene027658:intron | 30.0% |
| !!! | TTGTTTTGGTTTGTGCTTTA+AGG | - | chr5.2:23916931-23916950 | MS.gene027658:intron | 30.0% |
| AACTGAACTCTCTGAATTCT+AGG | - | chr5.2:23918740-23918759 | MS.gene027658:intron | 35.0% | |
| AATGACTGGTATATGCAAAC+AGG | - | chr5.2:23920447-23920466 | MS.gene027658:CDS | 35.0% | |
| AATGTATATTAACACGCCAC+TGG | - | chr5.2:23917816-23917835 | MS.gene027658:intron | 35.0% | |
| AATTACACCAGATTCCTCTA+AGG | + | chr5.2:23918398-23918417 | None:intergenic | 35.0% | |
| AATTCAGAGAGTTCAGTTAC+AGG | + | chr5.2:23918738-23918757 | None:intergenic | 35.0% | |
| ACTAATGGAAGACACATTCA+AGG | - | chr5.2:23919686-23919705 | MS.gene027658:intron | 35.0% | |
| ACTGAACTCTCTGAATTCTA+GGG | - | chr5.2:23918741-23918760 | MS.gene027658:intron | 35.0% | |
| ATAGATCAAGGGAGAAATTG+AGG | - | chr5.2:23917744-23917763 | MS.gene027658:intron | 35.0% | |
| ATGTATATTAACACGCCACT+GGG | - | chr5.2:23917817-23917836 | MS.gene027658:intron | 35.0% | |
| ATTACACCAGATTCCTCTAA+GGG | + | chr5.2:23918397-23918416 | None:intergenic | 35.0% | |
| CCAAACCAATTTGAAGGTTA+TGG | + | chr5.2:23917513-23917532 | None:intergenic | 35.0% | |
| CCATAACCTTCAAATTGGTT+TGG | - | chr5.2:23917510-23917529 | MS.gene027658:intron | 35.0% | |
| CCATATGAGAGAAAATGAGT+TGG | + | chr5.2:23918777-23918796 | None:intergenic | 35.0% | |
| CTTTCACAAATGAAGCAACT+TGG | + | chr5.2:23917093-23917112 | None:intergenic | 35.0% | |
| GATCCAGGAATCAAAGTTAA+AGG | - | chr5.2:23920186-23920205 | MS.gene027658:intron | 35.0% | |
| GGAAACTATGCAGAATATAG+TGG | - | chr5.2:23919285-23919304 | MS.gene027658:intron | 35.0% | |
| GTGAAACCTGACATGTTATT+TGG | - | chr5.2:23917022-23917041 | MS.gene027658:intron | 35.0% | |
| GTGTCTTCCATTAGTCAAAT+TGG | + | chr5.2:23919681-23919700 | None:intergenic | 35.0% | |
| GTTAGTGCAGTTCAAATATG+TGG | - | chr5.2:23916289-23916308 | MS.gene027658:CDS | 35.0% | |
| TATGTCCATTGTAGTAGGTT+TGG | + | chr5.2:23919745-23919764 | None:intergenic | 35.0% | |
| TCAATTAGCTAACCTCAATC+GGG | + | chr5.2:23920303-23920322 | None:intergenic | 35.0% | |
| TCTTCATTATGTGGGATGAA+AGG | + | chr5.2:23917324-23917343 | None:intergenic | 35.0% | |
| TGAATGTAAGGTTTGAAGGA+CGG | + | chr5.2:23917160-23917179 | None:intergenic | 35.0% | |
| TTATGTGCAGGAAATAGATG+GGG | + | chr5.2:23917474-23917493 | None:intergenic | 35.0% | |
| ! | AATTTCCATTGCCATTTGGA+AGG | - | chr5.2:23918176-23918195 | MS.gene027658:intron | 35.0% |
| ! | AGCATAAGCTTTTCAGAATG+TGG | - | chr5.2:23917381-23917400 | MS.gene027658:intron | 35.0% |
| ! | ATAAGCTTTTCAGAATGTGG+AGG | - | chr5.2:23917384-23917403 | MS.gene027658:intron | 35.0% |
| ! | ATTTCCATTGCCATTTGGAA+GGG | - | chr5.2:23918177-23918196 | MS.gene027658:intron | 35.0% |
| ! | CAAAAAAGGGCTCTTGTTAT+AGG | - | chr5.2:23920010-23920029 | MS.gene027658:intron | 35.0% |
| ! | CCAACTCATTTTCTCTCATA+TGG | - | chr5.2:23918774-23918793 | MS.gene027658:CDS | 35.0% |
| !! | CTTTACTTTTCTGTCAGATC+TGG | - | chr5.2:23917924-23917943 | MS.gene027658:intron | 35.0% |
| !! | GAAGTATTGCTGTTTCTGAT+AGG | + | chr5.2:23918830-23918849 | None:intergenic | 35.0% |
| !! | TGGTTTGTGCTTTAAGGTTA+CGG | - | chr5.2:23916937-23916956 | MS.gene027658:intron | 35.0% |
| !!! | CTATAACAAGAGCCCTTTTT+TGG | + | chr5.2:23920012-23920031 | None:intergenic | 35.0% |
| !!! | GCATTTTTTCTAGACCCTTT+TGG | + | chr5.2:23920255-23920274 | None:intergenic | 35.0% |
| AACATTGTCTCTGACAGACT+TGG | - | chr5.2:23917354-23917373 | MS.gene027658:intron | 40.0% | |
| AATTTGGACAATGGTTGCTG+GGG | - | chr5.2:23919106-23919125 | MS.gene027658:intron | 40.0% | |
| ATAACCCTTCCAAATGGCAA+TGG | + | chr5.2:23918184-23918203 | None:intergenic | 40.0% | |
| ATATGGCTCCACTTTCTTCT+AGG | - | chr5.2:23918791-23918810 | MS.gene027658:CDS | 40.0% | |
| ATGAACAGACGTTGTCGTAT+TGG | - | chr5.2:23918133-23918152 | MS.gene027658:intron | 40.0% | |
| ATTCACTGTGTTGAACCCAA+AGG | - | chr5.2:23919079-23919098 | MS.gene027658:intron | 40.0% | |
| CAAGAATGCACCTTTATGTG+AGG | - | chr5.2:23920212-23920231 | MS.gene027658:intron | 40.0% | |
| CAGCAACCATTGTCCAAATT+CGG | + | chr5.2:23919106-23919125 | None:intergenic | 40.0% | |
| CCTCTCATATCCAAAGGATA+AGG | + | chr5.2:23917997-23918016 | None:intergenic | 40.0% | |
| CCTTATCCTTTGGATATGAG+AGG | - | chr5.2:23917994-23918013 | MS.gene027658:intron | 40.0% | |
| CTAGAAAAAATGCGAGCACT+TGG | - | chr5.2:23920262-23920281 | MS.gene027658:intron | 40.0% | |
| CTTACTTGTGCAGACTTGAT+AGG | + | chr5.2:23916147-23916166 | None:intergenic | 40.0% | |
| GAATTTGGACAATGGTTGCT+GGG | - | chr5.2:23919105-23919124 | MS.gene027658:intron | 40.0% | |
| GGTTGCCTTGAATTTGGATT+TGG | - | chr5.2:23917066-23917085 | MS.gene027658:intron | 40.0% | |
| GTCACTTCATGCTGCAAATA+TGG | + | chr5.2:23919205-23919224 | None:intergenic | 40.0% | |
| GTCTGTCAGAGACAATGTTA+AGG | + | chr5.2:23917353-23917372 | None:intergenic | 40.0% | |
| GTTACAGGTTCGCTATATGA+AGG | + | chr5.2:23918723-23918742 | None:intergenic | 40.0% | |
| TAGGTATTCTGCGAACACTA+TGG | - | chr5.2:23919466-23919485 | MS.gene027658:CDS | 40.0% | |
| TAGTGTCATCTACGCTGATA+CGG | - | chr5.2:23919136-23919155 | MS.gene027658:CDS | 40.0% | |
| TATGGCATAAGCACTTGCAA+AGG | + | chr5.2:23916785-23916804 | None:intergenic | 40.0% | |
| TCCATGAATGAAAGACTCAG+TGG | + | chr5.2:23918212-23918231 | None:intergenic | 40.0% | |
| TGAATTTACCTCCAAGGGAA+GGG | + | chr5.2:23917614-23917633 | None:intergenic | 40.0% | |
| TGCAAAACCTCCTCTTCATT+GGG | + | chr5.2:23919315-23919334 | None:intergenic | 40.0% | |
| TTAATACAGGTAGGCGATCT+TGG | - | chr5.2:23919246-23919265 | MS.gene027658:CDS | 40.0% | |
| TTACACCAGATTCCTCTAAG+GGG | + | chr5.2:23918396-23918415 | None:intergenic | 40.0% | |
| TTCACTGTGTTGAACCCAAA+GGG | - | chr5.2:23919080-23919099 | MS.gene027658:intron | 40.0% | |
| TTGAATTTACCTCCAAGGGA+AGG | + | chr5.2:23917615-23917634 | None:intergenic | 40.0% | |
| TTGGGCCAAATCCAAATTCA+AGG | + | chr5.2:23917074-23917093 | None:intergenic | 40.0% | |
| ! | AAAAGGGCTCTTGTTATAGG+TGG | - | chr5.2:23920013-23920032 | MS.gene027658:intron | 40.0% |
| ! | ATACCAGTCATTGTTGCTTC+AGG | + | chr5.2:23920439-23920458 | None:intergenic | 40.0% |
| ! | CTGCCTTTAACTTTGATTCC+TGG | + | chr5.2:23920192-23920211 | None:intergenic | 40.0% |
| ! | CTTTAAGAGACTTTCTGGCA+AGG | - | chr5.2:23916116-23916135 | MS.gene027658:intron | 40.0% |
| ! | GAGCACTTTAAGAGACTTTC+TGG | - | chr5.2:23916111-23916130 | MS.gene027658:CDS | 40.0% |
| ! | TATGGTGCTAACGTGAACAA+CGG | - | chr5.2:23919415-23919434 | MS.gene027658:intron | 40.0% |
| ! | TGATGGAAAGCCTTATCCTT+TGG | - | chr5.2:23917984-23918003 | MS.gene027658:intron | 40.0% |
| !! | TCATTTGTGAAAGAGCGTCT+TGG | - | chr5.2:23917100-23917119 | MS.gene027658:intron | 40.0% |
| !! | TCTAGACCCTTTTGGTAGTT+CGG | + | chr5.2:23920247-23920266 | None:intergenic | 40.0% |
| !! | TGGTTTGGTTGCCTTGAATT+TGG | - | chr5.2:23917060-23917079 | MS.gene027658:intron | 40.0% |
| AAAAATGCGAGCACTTGGAG+AGG | - | chr5.2:23920267-23920286 | MS.gene027658:intron | 45.0% | |
| AAAGGGCCGAATTTGGACAA+TGG | - | chr5.2:23919097-23919116 | MS.gene027658:intron | 45.0% | |
| AATTCGGGCACTAAAGGAGA+AGG | - | chr5.2:23920081-23920100 | MS.gene027658:intron | 45.0% | |
| AGCTGCAAGACAAGGAACAA+TGG | - | chr5.2:23916978-23916997 | MS.gene027658:intron | 45.0% | |
| ATGCACGCTACAGTGAATCA+AGG | + | chr5.2:23916891-23916910 | None:intergenic | 45.0% | |
| ATTGTCCAAATTCGGCCCTT+TGG | + | chr5.2:23919098-23919117 | None:intergenic | 45.0% | |
| ATTTGGACAATGGTTGCTGG+GGG | - | chr5.2:23919107-23919126 | MS.gene027658:intron | 45.0% | |
| CGAATTTGGACAATGGTTGC+TGG | - | chr5.2:23919104-23919123 | MS.gene027658:intron | 45.0% | |
| CGCTTCCCAAATAACATGTC+AGG | + | chr5.2:23917031-23917050 | None:intergenic | 45.0% | |
| CTGCAAAACCTCCTCTTCAT+TGG | + | chr5.2:23919316-23919335 | None:intergenic | 45.0% | |
| GAAGCGTGGTAAAAGTGGTT+TGG | - | chr5.2:23917045-23917064 | MS.gene027658:intron | 45.0% | |
| GAGAGCCAAACCTACTACAA+TGG | - | chr5.2:23919737-23919756 | MS.gene027658:intron | 45.0% | |
| GAGTAACAAGAGCCCTTTGT+CGG | + | chr5.2:23919928-23919947 | None:intergenic | 45.0% | |
| GCACTCATAACCCTTCCAAA+TGG | + | chr5.2:23918190-23918209 | None:intergenic | 45.0% | |
| GCCACTGAGTCTTTCATTCA+TGG | - | chr5.2:23918208-23918227 | MS.gene027658:intron | 45.0% | |
| GGAGTCTATGTCCGTATCAA+TGG | - | chr5.2:23918954-23918973 | MS.gene027658:CDS | 45.0% | |
| GTTAGGAGAGAATGTCTCTC+TGG | + | chr5.2:23918653-23918672 | None:intergenic | 45.0% | |
| GTTGAAATGGGTGGATGCAA+GGG | - | chr5.2:23917273-23917292 | MS.gene027658:CDS | 45.0% | |
| TGGCATAATTCGGGCACTAA+AGG | - | chr5.2:23920075-23920094 | MS.gene027658:intron | 45.0% | |
| TGTAAGGTTTGAAGGACGGA+CGG | + | chr5.2:23917156-23917175 | None:intergenic | 45.0% | |
| TTGCAGCTCAGTGAAATCAG+TGG | + | chr5.2:23916966-23916985 | None:intergenic | 45.0% | |
| TTGTCCAAATTCGGCCCTTT+GGG | + | chr5.2:23919097-23919116 | None:intergenic | 45.0% | |
| TTTCACTGAGCTGCAAGACA+AGG | - | chr5.2:23916970-23916989 | MS.gene027658:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr5.2:23919515-23919534 | None:intergenic | 45.0% |
| ! | ACAGGCGCACACATATTTTC+TGG | + | chr5.2:23918311-23918330 | None:intergenic | 45.0% |
| ! | ATGGTGCTAACGTGAACAAC+GGG | - | chr5.2:23919416-23919435 | MS.gene027658:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr5.2:23919516-23919535 | None:intergenic | 45.0% |
| ! | CTGTTTTGCCACCATTGTAG+AGG | + | chr5.2:23918587-23918606 | None:intergenic | 45.0% |
| ! | GACATGTTATTTGGGAAGCG+TGG | - | chr5.2:23917031-23917050 | MS.gene027658:intron | 45.0% |
| ! | TTTGGGAAGCGTGGTAAAAG+TGG | - | chr5.2:23917040-23917059 | MS.gene027658:intron | 45.0% |
| !! | CTTGGCTTTGCAAATGAGCT+TGG | - | chr5.2:23919264-23919283 | MS.gene027658:CDS | 45.0% |
| !! | GAAAGAGCGTCTTGGTAAAG+AGG | - | chr5.2:23917108-23917127 | MS.gene027658:intron | 45.0% |
| !! | TTGTCGTATTGGTTGCAGGT+GGG | - | chr5.2:23918144-23918163 | MS.gene027658:intron | 45.0% |
| !!! | AAGAGCCCTTTTTTGGCCAT+CGG | + | chr5.2:23920005-23920024 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTGTAATTT+TGG | - | chr5.2:23919776-23919795 | MS.gene027658:intron | 5.0% |
| AAGGGAAGGGTTGCAACAAG+TGG | + | chr5.2:23917601-23917620 | None:intergenic | 50.0% | |
| ACACCCGCTTCACGCATTTA+GGG | + | chr5.2:23919582-23919601 | None:intergenic | 50.0% | |
| AGCTCGCCTCTCATATCCAA+AGG | + | chr5.2:23918003-23918022 | None:intergenic | 50.0% | |
| AGGGAAGGGTTGCAACAAGT+GGG | + | chr5.2:23917600-23917619 | None:intergenic | 50.0% | |
| ATGCACCTTTATGTGAGGCG+AGG | - | chr5.2:23920217-23920236 | MS.gene027658:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr5.2:23919514-23919533 | MS.gene027658:CDS | 50.0% | |
| CGAGCACTTGGAGAGGAAAT+TGG | - | chr5.2:23920274-23920293 | MS.gene027658:intron | 50.0% | |
| CGAGCGTACAACCTCTACAA+TGG | - | chr5.2:23918573-23918592 | MS.gene027658:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr5.2:23919511-23919530 | None:intergenic | 50.0% | |
| GATGTAAGAGACACTCCCGT+TGG | + | chr5.2:23917565-23917584 | None:intergenic | 50.0% | |
| GATTGCACAAGTACACCCAG+TGG | + | chr5.2:23917835-23917854 | None:intergenic | 50.0% | |
| GCGTACAACCTCTACAATGG+TGG | - | chr5.2:23918576-23918595 | MS.gene027658:CDS | 50.0% | |
| GGAAATTGGCATCCCGATTG+AGG | - | chr5.2:23920288-23920307 | MS.gene027658:intron | 50.0% | |
| GGACCTGAAGCAACAATGAC+TGG | - | chr5.2:23920433-23920452 | MS.gene027658:CDS | 50.0% | |
| GGAGAGAATGTCTCTCTGGT+AGG | + | chr5.2:23918649-23918668 | None:intergenic | 50.0% | |
| GGTTGAAATGGGTGGATGCA+AGG | - | chr5.2:23917272-23917291 | MS.gene027658:CDS | 50.0% | |
| GTCATCTACGCTGATACGGT+GGG | - | chr5.2:23919140-23919159 | MS.gene027658:CDS | 50.0% | |
| GTTCGCTATATGAAGGAGCG+AGG | + | chr5.2:23918716-23918735 | None:intergenic | 50.0% | |
| TAGTGGTGCACCCAATGAAG+AGG | - | chr5.2:23919302-23919321 | MS.gene027658:intron | 50.0% | |
| TGAACCCAAAGGGCCGAATT+TGG | - | chr5.2:23919090-23919109 | MS.gene027658:intron | 50.0% | |
| TGCACCTTTATGTGAGGCGA+GGG | - | chr5.2:23920218-23920237 | MS.gene027658:intron | 50.0% | |
| TGGTCCCTAAATGCGTGAAG+CGG | - | chr5.2:23919575-23919594 | MS.gene027658:CDS | 50.0% | |
| TGTCATCTACGCTGATACGG+TGG | - | chr5.2:23919139-23919158 | MS.gene027658:CDS | 50.0% | |
| TGTCTGACACCGACACATGT+CGG | + | chr5.2:23918875-23918894 | None:intergenic | 50.0% | |
| ! | ACCAGATTCCTCTAAGGGGT+AGG | + | chr5.2:23918392-23918411 | None:intergenic | 50.0% |
| ! | ACTTGTTGCAACCCTTCCCT+TGG | - | chr5.2:23917600-23917619 | MS.gene027658:intron | 50.0% |
| ! | AGATTCCTCTAAGGGGTAGG+GGG | + | chr5.2:23918389-23918408 | None:intergenic | 50.0% |
| ! | AGGGCTCTTGTTATAGGTGG+AGG | - | chr5.2:23920016-23920035 | MS.gene027658:intron | 50.0% |
| ! | CAGATTCCTCTAAGGGGTAG+GGG | + | chr5.2:23918390-23918409 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr5.2:23919517-23919536 | None:intergenic | 50.0% |
| ! | CCAGATTCCTCTAAGGGGTA+GGG | + | chr5.2:23918391-23918410 | None:intergenic | 50.0% |
| ! | TCTGGTAGGAGCTTAGCTCT+GGG | + | chr5.2:23918635-23918654 | None:intergenic | 50.0% |
| !! | ACATGTGTCGGTGTCAGACA+CGG | - | chr5.2:23918875-23918894 | MS.gene027658:intron | 50.0% |
| !! | GACGTTGTCGTATTGGTTGC+AGG | - | chr5.2:23918140-23918159 | MS.gene027658:intron | 50.0% |
| !! | GTTGTCGTATTGGTTGCAGG+TGG | - | chr5.2:23918143-23918162 | MS.gene027658:intron | 50.0% |
| !! | TGTCGTATTGGTTGCAGGTG+GGG | - | chr5.2:23918145-23918164 | MS.gene027658:intron | 50.0% |
| !!! | AGAGCCCTTTTTTGGCCATC+GGG | + | chr5.2:23920004-23920023 | None:intergenic | 50.0% |
| !!! | AGGTGTGCTTTTTCCCACTC+TGG | - | chr5.2:23917128-23917147 | MS.gene027658:intron | 50.0% |
| ACCGACACATGTCGGACACT+AGG | + | chr5.2:23918867-23918886 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr5.2:23919503-23919522 | None:intergenic | 55.0% | |
| AGGGGGTCCGAACTACCAAA+AGG | - | chr5.2:23920237-23920256 | MS.gene027658:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr5.2:23919502-23919521 | MS.gene027658:CDS | 55.0% | |
| CACCTTTATGTGAGGCGAGG+GGG | - | chr5.2:23920220-23920239 | MS.gene027658:intron | 55.0% | |
| CCCTACCCCTTAGAGGAATC+TGG | - | chr5.2:23918388-23918407 | MS.gene027658:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr5.2:23919509-23919528 | MS.gene027658:CDS | 55.0% | |
| CGACCCCGATGGCCAAAAAA+GGG | - | chr5.2:23919997-23920016 | MS.gene027658:intron | 55.0% | |
| CTCTGGTAGGAGCTTAGCTC+TGG | + | chr5.2:23918636-23918655 | None:intergenic | 55.0% | |
| GAATACCCCCTACCCCTTAG+AGG | - | chr5.2:23918381-23918400 | MS.gene027658:intron | 55.0% | |
| GACACCCGCTTCACGCATTT+AGG | + | chr5.2:23919583-23919602 | None:intergenic | 55.0% | |
| GCACCTTTATGTGAGGCGAG+GGG | - | chr5.2:23920219-23920238 | MS.gene027658:intron | 55.0% | |
| GCCTAGTGTCCGACATGTGT+CGG | - | chr5.2:23918863-23918882 | MS.gene027658:intron | 55.0% | |
| GGGAAGGGTTGCAACAAGTG+GGG | + | chr5.2:23917599-23917618 | None:intergenic | 55.0% | |
| GGGGGTCCGAACTACCAAAA+GGG | - | chr5.2:23920238-23920257 | MS.gene027658:intron | 55.0% | |
| GGTCCCTAAATGCGTGAAGC+GGG | - | chr5.2:23919576-23919595 | MS.gene027658:CDS | 55.0% | |
| TCAGGGTCAGCAGTTGCACA+TGG | + | chr5.2:23919902-23919921 | None:intergenic | 55.0% | |
| TGACCCTGATGGCCGACAAA+GGG | - | chr5.2:23919913-23919932 | MS.gene027658:intron | 55.0% | |
| TGGTGCACCCAATGAAGAGG+AGG | - | chr5.2:23919305-23919324 | MS.gene027658:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr5.2:23919503-23919522 | MS.gene027658:CDS | 55.0% | |
| TGTGCAACTGCTGACCCTGA+TGG | - | chr5.2:23919902-23919921 | MS.gene027658:intron | 55.0% | |
| TGTTGCAACCCTTCCCTTGG+AGG | - | chr5.2:23917603-23917622 | MS.gene027658:intron | 55.0% | |
| !! | TAGGAGCTTAGCTCTGGGCA+GGG | + | chr5.2:23918630-23918649 | None:intergenic | 55.0% |
| !!! | CCTTTTTTGGCCATCGGGGT+CGG | + | chr5.2:23919999-23920018 | None:intergenic | 55.0% |
| !!! | GAGCCCTTTTTTGGCCATCG+GGG | + | chr5.2:23920003-23920022 | None:intergenic | 55.0% |
| AGAGCCCTTTGTCGGCCATC+AGG | + | chr5.2:23919920-23919939 | None:intergenic | 60.0% | |
| CCGACCCCGATGGCCAAAAA+AGG | - | chr5.2:23919996-23920015 | MS.gene027658:intron | 60.0% | |
| CTGACCCTGATGGCCGACAA+AGG | - | chr5.2:23919912-23919931 | MS.gene027658:intron | 60.0% | |
| GACCCCCTCGCCTCACATAA+AGG | + | chr5.2:23920225-23920244 | None:intergenic | 60.0% | |
| GAGCCCTTTGTCGGCCATCA+GGG | + | chr5.2:23919919-23919938 | None:intergenic | 60.0% | |
| TGGACAATGGTTGCTGGGGG+AGG | - | chr5.2:23919110-23919129 | MS.gene027658:intron | 60.0% | |
| !! | AGGAGCTTAGCTCTGGGCAG+GGG | + | chr5.2:23918629-23918648 | None:intergenic | 60.0% |
| !! | GTAGGAGCTTAGCTCTGGGC+AGG | + | chr5.2:23918631-23918650 | None:intergenic | 60.0% |
| AAGGACGGACGGAGCCAGAG+TGG | + | chr5.2:23917145-23917164 | None:intergenic | 65.0% | |
| AGGACGGACGGAGCCAGAGT+GGG | + | chr5.2:23917144-23917163 | None:intergenic | 65.0% | |
| TGTGCAACTGCCGACCCCGA+TGG | - | chr5.2:23919986-23920005 | MS.gene027658:intron | 65.0% | |
| CGGGGTCGGCAGTTGCACAC+TGG | + | chr5.2:23919985-23920004 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 23916063 | 23920498 | 23916063 | ID=MS.gene027658 |
| chr5.2 | mRNA | 23916063 | 23920498 | 23916063 | ID=MS.gene027658.t1;Parent=MS.gene027658 |
| chr5.2 | exon | 23920400 | 23920498 | 23920400 | ID=MS.gene027658.t1.exon1;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23920400 | 23920498 | 23920400 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23919432 | 23919608 | 23919432 | ID=MS.gene027658.t1.exon2;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23919432 | 23919608 | 23919432 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23919127 | 23919288 | 23919127 | ID=MS.gene027658.t1.exon3;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23919127 | 23919288 | 23919127 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23918937 | 23919017 | 23918937 | ID=MS.gene027658.t1.exon4;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23918937 | 23919017 | 23918937 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23918762 | 23918813 | 23918762 | ID=MS.gene027658.t1.exon5;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23918762 | 23918813 | 23918762 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23918506 | 23918620 | 23918506 | ID=MS.gene027658.t1.exon6;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23918506 | 23918620 | 23918506 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23918318 | 23918399 | 23918318 | ID=MS.gene027658.t1.exon7;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23918318 | 23918399 | 23918318 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23917404 | 23917499 | 23917404 | ID=MS.gene027658.t1.exon8;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23917404 | 23917499 | 23917404 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23917205 | 23917306 | 23917205 | ID=MS.gene027658.t1.exon9;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23917205 | 23917306 | 23917205 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23916459 | 23916575 | 23916459 | ID=MS.gene027658.t1.exon10;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23916459 | 23916575 | 23916459 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23916252 | 23916368 | 23916252 | ID=MS.gene027658.t1.exon11;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23916252 | 23916368 | 23916252 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| chr5.2 | exon | 23916063 | 23916134 | 23916063 | ID=MS.gene027658.t1.exon12;Parent=MS.gene027658.t1 |
| chr5.2 | CDS | 23916063 | 23916134 | 23916063 | ID=cds.MS.gene027658.t1;Parent=MS.gene027658.t1 |
| Gene Sequence |
| Protein sequence |
